Mercurial > repos > iuc > transit_resampling

comparison transit_resampling.xml @ 5:885459e1c83b draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transit/ commit d1f8cb0c56e082656c5d4a8729e612bdc5b6e3cc"
author iuc
date Sat, 27 Nov 2021 09:49:19 +0000
parents ad4d42fabf32
children
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4:ad4d42fabf32 5:885459e1c83b
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool id="transit_resampling" name="Resampling" version="@VERSION@+galaxy0"> 2 <tool id="transit_resampling" name="TRANSIT Resampling" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
3 <description>- determine per-gene p-values</description> 3 <description>- determine per-gene p-values</description>
4 <expand macro="bio_tools"/>
4 <macros> 5 <macros>
5 <import>macros.xml</import> 6 <import>macros.xml</import>
6 </macros> 7 </macros>
7 <expand macro="requirements" /> 8 <expand macro="requirements" />
8 <command detect_errors="exit_code"><![CDATA[ 9 <command detect_errors="exit_code"><![CDATA[
36 <test> 37 <test>
37 <param name="inputs" ftype="wig" value="transit-in1-rep1.wig,transit-in1-rep2.wig" /> 38 <param name="inputs" ftype="wig" value="transit-in1-rep1.wig,transit-in1-rep2.wig" />
38 <param name="controls" ftype="wig" value="transit-co1-rep1.wig,transit-co1-rep2.wig,transit-co1-rep3.wig" /> 39 <param name="controls" ftype="wig" value="transit-co1-rep1.wig,transit-co1-rep2.wig,transit-co1-rep3.wig" />
39 <param name="annotation" ftype="tabular" value="transit-in1.prot" /> 40 <param name="annotation" ftype="tabular" value="transit-in1.prot" />
40 <param name="samples" value="1000" /> 41 <param name="samples" value="1000" />
41 <param name="burnin" value="100" />
42 <param name="replicates" value="Replicates" /> 42 <param name="replicates" value="Replicates" />
43 <output name="sites" file="resampling-sites1.txt" ftype="tabular" compare="sim_size" /> 43 <output name="sites" file="resampling-sites1.txt" ftype="tabular" compare="sim_size" />
44 </test> 44 </test>
45 </tests> 45 </tests>
46 46