Mercurial > repos > iuc > transtermhp

comparison transtermhp.xml @ 6:42b38f6d9f68 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transtermhp commit 91a178ddfde8cc9d6ca5224685a989c5618096fe
author iuc
date Tue, 12 Mar 2024 08:09:36 +0000
parents 012171ba9fce
children
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5:012171ba9fce 6:42b38f6d9f68
1 <tool id="transtermhp" name="TransTermHP" version="@WRAPPER_VERSION@.1"> 1 <tool id="transtermhp" name="TransTermHP" version="@WRAPPER_VERSION@.1">
2 <description>finds rho-independent transcription terminators in bacterial genomes</description> 2 <description>finds rho-independent transcription terminators in bacterial genomes</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="xrefs"/>
6 <expand macro="requirements"/> 7 <expand macro="requirements"/>
7 <expand macro="stdio"/> 8 <expand macro="stdio"/>
8 <command><![CDATA[ 9 <command><![CDATA[
9 ## fix for TRANSTERMHP not set on containers 10 ## fix for TRANSTERMHP not set on containers
10 TRANSTERMHP=\${TRANSTERMHP:-\$(dirname \$(command -v transterm))/../data/expterm.dat} && 11 TRANSTERMHP=\${TRANSTERMHP:-\$(dirname \$(command -v transterm))/../data/expterm.dat} &&