Mercurial > repos > iuc > transtermhp

diff transtermhp.py @ 4:9a90656a1af9 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transtermhp commit a4b0969b33a68a0ea9ba12291f6694aec24f13ed
author iuc
date Tue, 30 Oct 2018 20:25:05 -0400
parents 1a1ec22a7e28
children
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line diff
--- a/transtermhp.py	Wed Jun 07 07:53:53 2017 -0400
+++ b/transtermhp.py	Tue Oct 30 20:25:05 2018 -0400
@@ -34,9 +34,9 @@
             output = subprocess.check_output(cmd)
             #   TERM 1         4342 - 4366     + F    93 -11.5 -3.22878 | opp_overlap 4342, overlap 4340 4357
             ttre = re.compile(
-                '^  (?P<name>.*) (?P<start>\d+) - (?P<end>\d+)\s+'
-                '(?P<strand>[-+])\s+(?P<loc>[GFRTHNgfr]+)\s+'
-                '(?P<conf>\d+)\s+(?P<hp>[0-9.-]+)\s+(?P<tail>[0-9.-]+)'
+                r'^  (?P<name>.*) (?P<start>\d+) - (?P<end>\d+)\s+'
+                r'(?P<strand>[-+])\s+(?P<loc>[GFRTHNgfr]+)\s+'
+                r'(?P<conf>\d+)\s+(?P<hp>[0-9.-]+)\s+(?P<tail>[0-9.-]+)'
             )
 
             rec.features = []