Mercurial > repos > iuc > trinity
diff README.rst @ 17:199aa6821ca5 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 7f726b691ead726864f1b67230cb5d58e16b5f58
| author | iuc |
|---|---|
| date | Fri, 15 Dec 2017 07:57:50 -0500 |
| parents | e65e640e6196 |
| children | cee61b3fcf78 |
line wrap: on
line diff
--- a/README.rst Mon Aug 28 16:53:46 2017 -0400 +++ b/README.rst Fri Dec 15 07:57:50 2017 -0500 @@ -9,22 +9,22 @@ By default, this tool is configured to limit the memory consumption to 1G. You might need to lower this limit if the machine(s) executing the jobs have less memory available. If you have a lot of reads to assemble and a machine with enough memory, you can increase it. -In both cases, you can set the TRINITY_MAX_MEMORY environmental variable in the destination section of the job_conf.xml file: +In both cases, you can set the TRINITY_MAX_MEMORY environmental variable in the destination section of the job_conf.xml file:: -<?xml version="1.0"?> -<!-- A sample job config that explicitly configures job running the way it is configured by default (if there is no explicit config). --> -<job_conf> - <plugins> - <plugin id="local" type="runner" load="galaxy.jobs.runners.local:LocalJobRunner" workers="4"/> - </plugins> - <handlers> - <handler id="main"/> - </handlers> - <destinations> - <destination id="local" runner="local"> - <env id="TRINITY_MAX_MEMORY">1G</env> - </destination> - </destinations> -</job_conf> + <?xml version="1.0"?> + <!-- A sample job config that explicitly configures job running the way it is configured by default (if there is no explicit config). --> + <job_conf> + <plugins> + <plugin id="local" type="runner" load="galaxy.jobs.runners.local:LocalJobRunner" workers="4"/> + </plugins> + <handlers> + <handler id="main"/> + </handlers> + <destinations> + <destination id="local" runner="local"> + <env id="TRINITY_MAX_MEMORY">1G</env> + </destination> + </destinations> + </job_conf>