Mercurial > repos > iuc > trinity

diff align_and_estimate_abundance.xml @ 9:8bd817614cc8 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit acdc3dfe5fd6317ae57899aa0e83130dff7460e7
author iuc
date Tue, 12 Jul 2016 11:36:37 -0400
parents 1b7800489efb
children
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line diff
--- a/align_and_estimate_abundance.xml	Tue Jun 28 12:22:40 2016 -0400
+++ b/align_and_estimate_abundance.xml	Tue Jul 12 11:36:37 2016 -0400
@@ -38,6 +38,8 @@
                 --SS_lib_type $inputs.strand.library_type
             #end if
 
+            --max_ins_size $inputs.paired_fragment_length
+
         #else:
             --single $inputs.input
 
@@ -52,8 +54,6 @@
             #end if
         #end if
 
-        --max_ins_size $inputs.paired_fragment_length
-
         ## Additional parameters.
         #if $additional_params.gene_map.has_gene_map == "no":
             --gene_trans_map $additional_params.gene_map.gene_trans_map