Mercurial > repos > iuc > trinity_abundance_estimates_to_matrix

comparison test-data/count/exp_diff/input.matrix.wt_37_vs_wt_GSNO.edgeR.DE_results @ 20:a009c96c5c18 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 1d443e73d2eb888660bbbc7af198f5bcca9c1a70
author iuc
date Tue, 11 Apr 2023 19:52:45 +0000
parents 13ab393ba794
children
comparison
equal deleted inserted replaced
19:bcc5f03f1900 20:a009c96c5c18
1 sampleA sampleB logFC logCPM PValue FDR 1 sampleA sampleB logFC logCPM PValue FDR
2 TR131|c0_g1_i1 wt_37 wt_GSNO -5.83641794955382 16.0393491449056 0 0 2 TR131|c0_g1_i1 wt_37 wt_GSNO -5.83642810105669 16.0393552039823 0 0
3 TR4277|c0_g1_i1 wt_37 wt_GSNO 4.41329536892161 17.453649857324 0 0 3 TR4277|c0_g1_i1 wt_37 wt_GSNO 4.41398153332839 17.4536476715771 1.21637348346174e-303 2.25029094440421e-302
4 TR3091|c0_g1_i1 wt_37 wt_GSNO -4.45192710783926 14.0403115023365 4.66239713643175e-192 5.75028980159916e-191 4 TR3091|c0_g1_i1 wt_37 wt_GSNO -4.45237397999856 14.0403314476332 9.11341318887913e-90 1.12398762662843e-88
5 TR4761|c0_g1_i1 wt_37 wt_GSNO 2.92754337500687 16.3361488759619 3.05265683396309e-191 2.82370757141586e-190 5 TR4761|c0_g1_i1 wt_37 wt_GSNO 2.92554296928641 16.3361450450387 3.69873891948914e-76 3.42133350052745e-75
6 TR2487|c0_g1_i1 wt_37 wt_GSNO -1.58705168340508 15.8893887856701 9.57106937146597e-124 7.08259133488482e-123 6 TR2487|c0_g1_i1 wt_37 wt_GSNO -1.58730581845079 15.8893922467915 5.42826219868508e-69 4.01691402702696e-68
7 TR1479|c0_g1_i1 wt_37 wt_GSNO -1.67065982572176 14.5610246448295 4.39649357092684e-84 2.71117103540489e-83 7 TR3854|c0_g1_i1 wt_37 wt_GSNO -0.756824867554791 17.5153344325941 9.93801411860139e-30 6.12844203980419e-29
8 TR3638|c0_g1_i1 wt_37 wt_GSNO 1.49937182627392 15.1071990563814 1.60652562072048e-64 8.49163542380826e-64 8 TR1479|c0_g1_i1 wt_37 wt_GSNO -1.67125620463691 14.56103285356 1.52685095059931e-26 8.07049788173923e-26
9 TR3854|c0_g1_i1 wt_37 wt_GSNO -0.756864683109858 17.5153338325952 9.14141417630157e-40 4.22790405653948e-39 9 TR3788|c0_g1_i1 wt_37 wt_GSNO -2.92384493547476 12.8707566447513 2.80716974025173e-26 1.29831600486643e-25
10 TR2122|c0_g2_i2 wt_37 wt_GSNO -0.90394318029981 13.8984589155106 3.98287653266084e-13 1.63740479676057e-12 10 TR3638|c0_g1_i1 wt_37 wt_GSNO 1.50400807132974 15.1071935803349 1.01131038761579e-25 4.15760937130936e-25
11 TR2844|c0_g1_i1 wt_37 wt_GSNO -0.707834005847516 14.1849675326065 1.90004997002049e-12 7.0301848890758e-12 11 TR2107|c1_g1_i1 wt_37 wt_GSNO 2.54917839024164 11.4899163098162 1.29813298421564e-11 4.80309204159787e-11
12 TR3788|c0_g1_i1 wt_37 wt_GSNO -2.92402824575823 12.8707284018497 1.35908019280542e-09 4.57145155761824e-09 12 TR2122|c0_g2_i2 wt_37 wt_GSNO -0.904224916354351 13.8984660083514 5.12805835511887e-07 1.72489235581271e-06
13 TR4669|c0_g2_i1 wt_37 wt_GSNO -10.5373989771184 13.0207784411552 2.87822490296537e-08 8.87452678414323e-08 13 TR2672|c0_g1_i1 wt_37 wt_GSNO 2.7835273976316 10.2430082688313 1.09649323769354e-05 3.26428239781416e-05
14 TR2672|c0_g1_i1 wt_37 wt_GSNO 2.77705541360002 10.2430402179839 7.41806563943484e-08 2.11129560506992e-07 14 TR2844|c0_g1_i1 wt_37 wt_GSNO -0.705628684062878 14.1849718403614 1.14691003166444e-05 3.26428239781416e-05
15 TR4163|c0_g1_i1 wt_37 wt_GSNO 0.420123134789911 14.7306522277754 2.74345107938324e-06 7.25054928122714e-06 15 TR127|c1_g1_i1 wt_37 wt_GSNO 3.25921752655672 9.85805490683478 4.65148368806407e-05 0.000122932068898836
16 TR127|c1_g1_i1 wt_37 wt_GSNO 3.26487561187968 9.85808314705506 6.1191913603037e-06 1.50940053554158e-05 16 TR5212|c0_g1_i1 wt_37 wt_GSNO -0.868846907645273 13.0312970321941 8.02549473297866e-05 0.000197962203413474
17 TR2107|c1_g1_i1 wt_37 wt_GSNO 2.54741701164587 11.489948731934 1.24782096095324e-05 2.88558597220436e-05 17 TR4669|c0_g2_i1 wt_37 wt_GSNO -10.5376618403783 13.0208222595793 0.000100983795793505 0.000233525027772479
18 TR2779|c0_g1_i1 wt_37 wt_GSNO -0.571512278204146 14.0677635717422 7.39487278515011e-05 0.000160947231206208 18 TR4163|c0_g1_i1 wt_37 wt_GSNO 0.419885302419972 14.7306501662725 0.000212062001530818 0.000461546709214134
19 TR1894|c2_g1_i1 wt_37 wt_GSNO 1.88989717290856 9.93884262525918 0.00064827406279645 0.00133256335130381 19 TR5055|c0_g2_i1 wt_37 wt_GSNO 1.89467947607274 10.6064557750525 0.000354706720299247 0.000729119369504007
20 TR5055|c0_g2_i1 wt_37 wt_GSNO 1.89504810994952 10.6064804346292 0.00584438080176016 0.011381162613954 20 TR1894|c2_g1_i1 wt_37 wt_GSNO 1.89765713767963 9.93882107563394 0.00173125775949168 0.00337139668953643
21 TR3807|c0_g1_i1 wt_37 wt_GSNO 2.66606066906632 8.56455983886691 0.0188051214716541 0.0347894747225602 21 TR1449|c0_g1_i1 wt_37 wt_GSNO 0.634078352010786 13.7169577495829 0.00217137808425439 0.00401704945587062
22 TR5212|c0_g1_i1 wt_37 wt_GSNO -0.867441722907523 13.0312878134755 0.0313380642877521 0.055214684697468 22 TR2779|c0_g1_i1 wt_37 wt_GSNO -0.57033686484928 14.0677674303448 0.0111989371149329 0.0197314606310723
23 TR1449|c0_g1_i1 wt_37 wt_GSNO 0.636828244112651 13.716963541734 0.0836258106887223 0.140643408885578 23 TR1891|c0_g1_i1 wt_37 wt_GSNO -0.481534755723158 13.501506224993 0.0143918226007056 0.0242044289193685
24 TR1837|c2_g1_i1 wt_37 wt_GSNO -2.70136949048315 8.19724487849862 0.11443273811818 0.184087448277072 24 TR3807|c0_g1_i1 wt_37 wt_GSNO 2.66618717222413 8.56454952883374 0.0190046641424073 0.0305727205769162
25 TR4859|c0_g1_i1 wt_37 wt_GSNO 1.06021338602227 9.44252758756623 0.17021260004507 0.262411091736149 25 TR24|c0_g1_i1 wt_37 wt_GSNO 0.595098414993735 12.3882263577198 0.0313658793311069 0.0483557306354564
26 TR4084|c0_g1_i1 wt_37 wt_GSNO -0.527027354857722 13.3333941866224 0.195100037539558 0.280916147575458 26 TR939|c0_g1_i1 wt_37 wt_GSNO -0.361675208475799 13.0833927791152 0.0549150321214498 0.0812742475397457
27 TR1891|c0_g1_i1 wt_37 wt_GSNO -0.481344817930584 13.5015018099629 0.197400536134106 0.280916147575458 27 TR4084|c0_g1_i1 wt_37 wt_GSNO -0.528091154047526 13.333398560375 0.0670751762392915 0.0954531354174533
28 TR24|c0_g1_i1 wt_37 wt_GSNO 0.590686928315332 12.3882336221811 0.209814398393357 0.287523434835341 28 TR1837|c2_g1_i1 wt_37 wt_GSNO -2.70993930289112 8.19725290476621 0.0887918514630023 0.121677722375225
29 TR2011|c5_g1_i1 wt_37 wt_GSNO -0.668008806764204 9.63014074618193 0.239244885423374 0.316145027166602 29 TR5075|c0_g1_i1 wt_37 wt_GSNO 0.614944173796075 10.4357920601168 0.162306513000849 0.214476463608265
30 TR939|c0_g1_i1 wt_37 wt_GSNO -0.361607139894815 13.0833886152319 0.340252678428006 0.434115486270215 30 TR4859|c0_g1_i1 wt_37 wt_GSNO 1.05953644928152 9.44251782921817 0.174748084396246 0.222954452505555
31 TR5075|c0_g1_i1 wt_37 wt_GSNO 0.617585416067661 10.4358029661318 0.377913209145196 0.466092957945741 31 TR2011|c5_g1_i1 wt_37 wt_GSNO -0.669059646383004 9.63015201113972 0.264703411652408 0.32646754103797
32 TR1492|c0_g1_i2 wt_37 wt_GSNO 0.0311900896664335 17.1368189470585 0.559289231968699 0.657620159615942 32 TR1492|c0_g1_i2 wt_37 wt_GSNO 0.031711320644402 17.1368189355291 0.451877741421955 0.539337949439108
33 TR3249|c0_g1_i1 wt_37 wt_GSNO -0.894241538356016 8.33957569586088 0.568752570478653 0.657620159615942 33 TR3249|c0_g1_i1 wt_37 wt_GSNO -0.891916586965799 8.33958255206055 0.564868681268914 0.653129412717181
34 TR2278|c0_g1_i1 wt_37 wt_GSNO -0.0373200220187202 15.4258149088647 0.636489077475997 0.713639268685208 34 TR2278|c0_g1_i1 wt_37 wt_GSNO -0.0377499361453361 15.4258150009092 0.736032464572516 0.825248520884336
35 TR2182|c3_g2_i6 wt_37 wt_GSNO 0.714549920613349 8.45775163335771 0.790296098133788 0.860028106792652 35 TR2182|c3_g2_i6 wt_37 wt_GSNO 0.715543556453753 8.45775004801063 0.789411909605702 0.859065901629735
36 TR1982|c2_g1_i1 wt_37 wt_GSNO -0.181275971858276 9.49467590956657 0.873422282667325 0.923332127391172 36 TR1982|c2_g1_i1 wt_37 wt_GSNO -0.179857779984199 9.4946775424438 0.881459062505158 0.931828151791167
37 TR1678|c0_g1_i1 wt_37 wt_GSNO -0.476606391142577 7.93769527756871 1 1 37 TR1678|c0_g1_i1 wt_37 wt_GSNO -0.501309819317686 7.93769570375269 1 1
38 TR1122|c0_g1_i1 wt_37 wt_GSNO 0.0647357997613641 8.26206759454538 1 1 38 TR1122|c0_g1_i1 wt_37 wt_GSNO 0.0611166350434577 8.2620697940663 1 1