Mercurial > repos > iuc > trinity_abundance_estimates_to_matrix
comparison test-data/count/exp_diff/input.matrix.wt_37_vs_wt_ph8.edgeR.DE_results @ 20:a009c96c5c18 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 1d443e73d2eb888660bbbc7af198f5bcca9c1a70
| author | iuc |
|---|---|
| date | Tue, 11 Apr 2023 19:52:45 +0000 |
| parents | 13ab393ba794 |
| children |
comparison
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| 19:bcc5f03f1900 | 20:a009c96c5c18 |
|---|---|
| 1 sampleA sampleB logFC logCPM PValue FDR | 1 sampleA sampleB logFC logCPM PValue FDR |
| 2 TR131|c0_g1_i1 wt_37 wt_ph8 -5.83867709149149 16.0447742820606 3.67956255674e-64 1.3982337715612e-62 | 2 TR131|c0_g1_i1 wt_37 wt_ph8 -5.84041934032622 16.0447738584896 2.64843647765193e-68 1.00640586150773e-66 |
| 3 TR3091|c0_g1_i1 wt_37 wt_ph8 -4.35104356420213 13.9337836495047 7.47918124727105e-59 1.4210444369815e-57 | 3 TR4277|c0_g1_i1 wt_37 wt_ph8 4.51251378503982 17.458563860849 7.87456958793119e-51 1.49616822170693e-49 |
| 4 TR4277|c0_g1_i1 wt_37 wt_ph8 4.51249642920563 17.4585638169146 1.30305812944242e-53 1.65054029729373e-52 | 4 TR3091|c0_g1_i1 wt_37 wt_ph8 -4.33866462808288 13.9337820695818 2.36438873567113e-40 2.99489239851676e-39 |
| 5 TR5075|c0_g1_i1 wt_37 wt_ph8 -3.18286810352713 12.8084040893566 8.25600206225396e-24 7.84320195914126e-23 | 5 TR5075|c0_g1_i1 wt_37 wt_ph8 -3.18184004176717 12.8084012906916 4.32969562983877e-23 4.11321084834683e-22 |
| 6 TR2107|c1_g1_i1 wt_37 wt_ph8 4.48477961203985 11.2510359028096 1.80754966502889e-22 1.37373774542196e-21 | 6 TR2779|c0_g1_i1 wt_37 wt_ph8 -2.76000097034818 15.7797193517192 7.02929665566158e-23 5.3422654583028e-22 |
| 7 TR2779|c0_g1_i1 wt_37 wt_ph8 -2.75442228103487 15.7797198210508 8.23352696880425e-15 5.21456708024269e-14 | 7 TR2107|c1_g1_i1 wt_37 wt_ph8 4.48695752844007 11.251039090086 2.85694633276303e-20 1.80939934408325e-19 |
| 8 TR1891|c0_g1_i1 wt_37 wt_ph8 -1.85607282303223 14.4424161372431 4.82341414399837e-12 2.61842482102769e-11 | 8 TR4761|c0_g1_i1 wt_37 wt_ph8 2.0579616780365 16.4916266757798 1.87157355154512e-14 1.01599707083878e-13 |
| 9 TR4761|c0_g1_i1 wt_37 wt_ph8 2.05815692521639 16.4916266891202 6.53530817860542e-12 3.10427138483757e-11 | 9 TR1891|c0_g1_i1 wt_37 wt_ph8 -1.85558303182422 14.4424152648443 1.3549609315801e-11 6.43606442500547e-11 |
| 10 TR1479|c0_g1_i1 wt_37 wt_ph8 -1.43256512308186 14.3771181295432 1.13197856555697e-09 4.77946505457389e-09 | 10 TR2122|c0_g2_i2 wt_37 wt_ph8 -1.63829756449903 14.4300663727902 1.82580551883595e-09 7.70895663508514e-09 |
| 11 TR2122|c0_g2_i2 wt_37 wt_ph8 -1.63807722824331 14.4300672231344 2.54380104198531e-09 9.66644395954419e-09 | 11 TR2487|c0_g1_i1 wt_37 wt_ph8 -1.52256386898699 15.8810632159828 1.00076368146348e-08 3.80290198956123e-08 |
| 12 TR24|c0_g1_i1 wt_37 wt_ph8 -1.56169455062581 13.613754007054 1.01137959952142e-08 3.49385679834671e-08 | 12 TR24|c0_g1_i1 wt_37 wt_ph8 -1.56069263322937 13.6137525216945 2.0641918619938e-08 7.13084461416041e-08 |
| 13 TR2487|c0_g1_i1 wt_37 wt_ph8 -1.52157644373511 15.8810635663776 2.37540305111961e-07 7.52210966187877e-07 | 13 TR1479|c0_g1_i1 wt_37 wt_ph8 -1.43017641947686 14.3771173732228 1.25129096758536e-07 3.96242139735364e-07 |
| 14 TR4084|c0_g1_i1 wt_37 wt_ph8 -0.991060679215133 13.5661427311877 4.21767858359174e-07 1.23285989366528e-06 | 14 TR127|c1_g1_i1 wt_37 wt_ph8 2.89378247411933 9.73961391632741 1.77483025831263e-06 5.18796537045229e-06 |
| 15 TR1678|c0_g1_i1 wt_37 wt_ph8 -3.62458577193226 9.02581543875671 1.43837087677047e-05 3.90414952266271e-05 | 15 TR1894|c2_g1_i1 wt_37 wt_ph8 2.84455594181396 9.70265363738305 3.80774768997069e-06 1.03353151584919e-05 |
| 16 TR127|c1_g1_i1 wt_37 wt_ph8 2.90111481011278 9.73961125813442 2.21824302925283e-05 5.61954900744051e-05 | 16 TR2090|c0_g1_i1 wt_37 wt_ph8 -5.84865009980137 8.72712853989006 7.1017296397318e-06 1.79910484206539e-05 |
| 17 TR1894|c2_g1_i1 wt_37 wt_ph8 2.85359093751189 9.70265145133598 3.82707393478771e-05 9.08930059512081e-05 | 17 TR5055|c0_g2_i1 wt_37 wt_ph8 1.82971910256975 10.5508300754678 1.05374662314498e-05 2.50264822996933e-05 |
| 18 TR5055|c0_g2_i1 wt_37 wt_ph8 1.8545312748531 10.5508309427169 0.000561739096452478 0.0012556520979526 | 18 TR1678|c0_g1_i1 wt_37 wt_ph8 -3.62297933758159 9.02581162405914 1.85386281004691e-05 4.1439286342225e-05 |
| 19 TR2090|c0_g1_i1 wt_37 wt_ph8 -5.85461418677349 8.72713197001274 0.000625444406369261 0.00132038263566844 | 19 TR4084|c0_g1_i1 wt_37 wt_ph8 -0.989047817791601 13.5661419902701 0.000266385708775898 0.000562369829638008 |
| 20 TR4859|c0_g1_i1 wt_37 wt_ph8 2.31469487039419 9.12085022188999 0.00236706272759891 0.00473412545519782 | 20 TR1492|c0_g1_i2 wt_37 wt_ph8 0.846946606328173 16.816027085378 0.00111844437365923 0.00223688874731846 |
| 21 TR1492|c0_g1_i2 wt_37 wt_ph8 0.847097868783511 16.8160271449712 0.00265383515294934 0.00504228679060374 | 21 TR4859|c0_g1_i1 wt_37 wt_ph8 2.31297110196869 9.12085217163192 0.00169405620519211 0.00321870678986502 |
| 22 TR3638|c0_g1_i1 wt_37 wt_ph8 0.812580107843708 15.3469752226999 0.00403607816905259 0.00730337954399992 | 22 TR3638|c0_g1_i1 wt_37 wt_ph8 0.812150684296427 15.3469750288171 0.00195862604708162 0.0035441804661477 |
| 23 TR3807|c0_g1_i1 wt_37 wt_ph8 2.92018331334326 8.37863764275674 0.0119536481076316 0.0206472103677272 | 23 TR3807|c0_g1_i1 wt_37 wt_ph8 2.91885642490418 8.37863917696072 0.00889981242694952 0.0153724032829128 |
| 24 TR1449|c0_g1_i1 wt_37 wt_ph8 0.576747771663695 13.7363876885022 0.0130185393324759 0.0215088910710471 | 24 TR2672|c0_g1_i1 wt_37 wt_ph8 1.09015105073495 10.4080380170218 0.0113968048117331 0.0188295036019939 |
| 25 TR1982|c2_g1_i1 wt_37 wt_ph8 -1.11743546508384 9.86122459596308 0.024471659211255 0.0382656346855499 | 25 TR3249|c0_g1_i1 wt_37 wt_ph8 -2.00248923602224 8.66772464596919 0.012175839230813 0.0192784121154539 |
| 26 TR2672|c0_g1_i1 wt_37 wt_ph8 1.09825528852042 10.4080374441724 0.025174759661546 0.0382656346855499 | 26 TR1982|c2_g1_i1 wt_37 wt_ph8 -1.11692146946545 9.86122186982139 0.0254732500230551 0.0380540735981811 |
| 27 TR3249|c0_g1_i1 wt_37 wt_ph8 -2.00776956676821 8.66772655901099 0.0275363688345113 0.0402454621427472 | 27 TR4163|c0_g1_i1 wt_37 wt_ph8 0.585493536631111 14.6858406628863 0.0260369977250713 0.0380540735981811 |
| 28 TR5212|c0_g1_i1 wt_37 wt_ph8 -0.582012857882519 12.8600915149255 0.0318599127004672 0.0448398771339909 | 28 TR1449|c0_g1_i1 wt_37 wt_ph8 0.579397661518319 13.7363873307119 0.0302958377959148 0.0426385865275838 |
| 29 TR4163|c0_g1_i1 wt_37 wt_ph8 0.585935901552979 14.6858409740027 0.0333717283041774 0.0452902026985264 | 29 TR5212|c0_g1_i1 wt_37 wt_ph8 -0.580254103150409 12.8600901680646 0.0404390149604427 0.054881520303458 |
| 30 TR2844|c0_g1_i1 wt_37 wt_ph8 -0.484938504762758 14.0537413817093 0.0410237194953782 0.0537552186491163 | 30 TR1859|c3_g1_i1 wt_37 wt_ph8 -2.66753302288967 8.08119047667972 0.0460728591095077 0.0603713326262514 |
| 31 TR1859|c3_g1_i1 wt_37 wt_ph8 -2.64648031785777 8.0811923384908 0.0677782555815868 0.0858524570700099 | 31 TR2844|c0_g1_i1 wt_37 wt_ph8 -0.482774572490911 14.0537407448782 0.0727694305006538 0.0921746119674948 |
| 32 TR2278|c0_g1_i1 wt_37 wt_ph8 0.462893051132405 15.2205527935145 0.0990317248813937 0.121393727273966 | 32 TR2278|c0_g1_i1 wt_37 wt_ph8 0.462415658712107 15.2205525577595 0.0767838146787893 0.0941220954127095 |
| 33 TR3854|c0_g1_i1 wt_37 wt_ph8 -0.45233145936844 17.3656486469949 0.115995274036176 0.13774438791796 | 33 TR3854|c0_g1_i1 wt_37 wt_ph8 -0.452545415035422 17.3656485551494 0.080313088818483 0.0953717929719486 |
| 34 TR3788|c0_g1_i1 wt_37 wt_ph8 -0.512277745155381 11.1125640718165 0.129462204245195 0.149077689736891 | 34 TR3788|c0_g1_i1 wt_37 wt_ph8 -0.50904223856954 11.112562271961 0.177982574706024 0.204949631479664 |
| 35 TR939|c0_g1_i1 wt_37 wt_ph8 -0.343195417039388 13.0829763503018 0.196684960972624 0.219824368145874 | 35 TR1837|c2_g1_i1 wt_37 wt_ph8 -2.21377059210539 7.92265348832559 0.23010293924542 0.251432947894972 |
| 36 TR1837|c2_g1_i1 wt_37 wt_ph8 -2.21076601464763 7.9226544260522 0.248563909756302 0.269869387735413 | 36 TR939|c0_g1_i1 wt_37 wt_ph8 -0.340377492720978 13.0829751506545 0.231582978324316 0.251432947894972 |
| 37 TR1122|c0_g1_i1 wt_37 wt_ph8 0.860567840252952 7.98418712954456 0.72405804618472 0.764283493194982 | 37 TR1122|c0_g1_i1 wt_37 wt_ph8 0.90037398238529 7.98418851125693 0.694931998823269 0.733539332091228 |
| 38 TR2011|c5_g1_i1 wt_37 wt_ph8 0.075980865610854 9.27931055760989 0.901508002533997 0.925873083683564 | 38 TR2182|c3_g2_i6 wt_37 wt_ph8 0.125015386728524 8.45393207220823 0.999999999999999 1 |
| 39 TR2182|c3_g2_i6 wt_37 wt_ph8 0.147124070779728 8.45393312498213 1 1 | 39 TR2011|c5_g1_i1 wt_37 wt_ph8 0.0588147623425484 9.27930953984144 1 1 |