Mercurial > repos > iuc > trinity_align_and_estimate_abundance

comparison align_and_estimate_abundance.xml @ 11:aed859a021c0 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 482fb46ba8d588f2294e21829a0904809b0ec3f1
author iuc
date Thu, 23 Aug 2018 12:54:49 -0400
parents afd41a430a76
children 6d6b72d14170
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10:afd41a430a76 11:aed859a021c0
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements"> 6 <expand macro="requirements">
7 <requirement type="package" version="1.3.0">rsem</requirement> 7 <requirement type="package" version="1.3.0">rsem</requirement>
8 <requirement type="package" version="1.5.1">express</requirement> 8 <requirement type="package" version="1.5.1">express</requirement>
9 <requirement type="package" version="0.9.1">salmon</requirement>
10 <requirement type="package" version="0.43.1">kallisto</requirement> 9 <requirement type="package" version="0.43.1">kallisto</requirement>
11 </expand> 10 </expand>
12 <command detect_errors="aggressive"><![CDATA[ 11 <command detect_errors="aggressive"><![CDATA[
13 ln -f -s '$transcripts' input.fa && 12 ln -f -s '$transcripts' input.fa &&
14 13