Mercurial > repos > iuc > trinity_gene_to_trans_map

comparison gene_to_trans_map.xml @ 20:7c7fbf13aadd draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit c6eab3b60743dfa415dc135d657267cc8a0a31ce
author iuc
date Tue, 08 Aug 2023 09:04:29 +0000
parents ba460ccf0006
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19:ba460ccf0006 20:7c7fbf13aadd
24 Trinity_ assembles transcript sequences from Illumina RNA-Seq data. 24 Trinity_ assembles transcript sequences from Illumina RNA-Seq data.
25 This tool produces a file containing correspondance between gene ids and transcript ids based on the name of transcripts assembled by Trinity. 25 This tool produces a file containing correspondance between gene ids and transcript ids based on the name of transcripts assembled by Trinity.
26 The output file is intended to be used by the "Align reads and estimate abundance" tool. 26 The output file is intended to be used by the "Align reads and estimate abundance" tool.
27 The same file is automatically generated when running Trinity, this tool is only intended to be used when you don't (or no longer) have access to the one produced by Trinity. 27 The same file is automatically generated when running Trinity, this tool is only intended to be used when you don't (or no longer) have access to the one produced by Trinity.
28 28
29 .. _Trinity: http://trinityrnaseq.github.io 29 .. _Trinity: https://github.com/trinityrnaseq/trinityrnaseq/wiki
30 </help> 30 </help>
31 <expand macro="citation" /> 31 <expand macro="citation" />
32 </tool> 32 </tool>