Mercurial > repos > iuc > trycycler_consensus
view macros.xml @ 5:9ded6109434a draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trycycler commit 7352940deeeddc0f1b7f0ac90451c4aa19df75b4"
author | iuc |
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date | Sat, 18 Dec 2021 19:50:44 +0000 |
parents | 43af166bc01e |
children | 19bdfd1e6fe3 |
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<macros> <token name="@TOOL_VERSION@">0.5.3</token> <token name="@PIPELINE@"> **Trycycler pipeline** :: Trycycler subsample: make maximally-independent read subsets of an appropriate depth. ⬇ Trycycler cluster: carries out complete-linkage clustering of all contig sequences. ⬇ Trycycler reconcile/msa: reconcile the contigs within each cluster and perform a multiple sequence alignment. ⬇ Trycycler partition: split the reads between the different clusters. ⬇ Trycycler consensus: generate a consensus contig sequence for each cluster. </token> <xml name="edam_ontology"> <edam_topics> <edam_topic>topic_0196</edam_topic> </edam_topics> <edam_operations> <edam_operation>operation_0525</edam_operation> </edam_operations> </xml> <xml name="requirements"> <requirements> <requirement type="package" version="@TOOL_VERSION@">trycycler</requirement> </requirements> </xml> <xml name="citations"> <citations> <citation type="bibtex"> @misc{githubTrycycler, author = {Ryan, Wick}, year = {2020}, title = {Trycycler}, publisher = {GitHub}, journal = {GitHub repository}, url = {https://github.com/rrwick/Trycycler}, } </citation> </citations> </xml> </macros>