comparison macros.xml @ 0:85658cabbbed draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trycycler commit 9d7c4277b0f96aacd466f2d497e08edcca3fa238"
author iuc
date Thu, 11 Feb 2021 19:25:20 +0000
parents
children cb4768eeca3b
comparison
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-1:000000000000 0:85658cabbbed
1 <macros>
2 <token name="@TOOL_VERSION@">0.4.2</token>
3 <token name="@PIPELINE@">
4 **Trycycler pipeline**
5
6 ::
7
8 Trycycler subsample: make maximally-independent read subsets of an appropriate depth.
9
10 Trycycler cluster: carries out complete-linkage clustering of all contig sequences.
11
12 Trycycler reconcile/msa: reconcile the contigs within each cluster and perform a multiple sequence alignment.
13
14 Trycycler partition: split the reads between the different clusters.
15
16 Trycycler consensus: generate a consensus contig sequence for each cluster.
17
18 </token>
19 <xml name="edam_ontology">
20 <edam_topics>
21 <edam_topic>topic_0196</edam_topic>
22 </edam_topics>
23 <edam_operations>
24 <edam_operation>operation_0525</edam_operation>
25 </edam_operations>
26 </xml>
27 <xml name="requirements">
28 <requirements>
29 <requirement type="package" version="@TOOL_VERSION@">trycycler</requirement>
30 </requirements>
31 </xml>
32 <xml name="citations">
33 <citations>
34 <citation type="bibtex">
35 @misc{githubTrycycler,
36 author = {Ryan, Wick},
37 year = {2020},
38 title = {Trycycler},
39 publisher = {GitHub},
40 journal = {GitHub repository},
41 url = {https://github.com/rrwick/Trycycler},
42 }
43 </citation>
44 </citations>
45 </xml>
46 </macros>