Mercurial > repos > iuc > ucsc_chainprenet
changeset 1:7b0b810b495f draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ucsc_tools/chainprenet commit 303002db06287fb25306020c4391626842f52162
| author | iuc |
|---|---|
| date | Sun, 22 Sep 2024 07:27:09 +0000 |
| parents | fa0a3a618a57 |
| children | |
| files | chainprenet.xml |
| diffstat | 1 files changed, 7 insertions(+), 2 deletions(-) [+] |
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--- a/chainprenet.xml Tue Aug 27 10:25:05 2024 +0000 +++ b/chainprenet.xml Sun Sep 22 07:27:09 2024 +0000 @@ -3,7 +3,7 @@ Remove chains that don't have a chance of being netted </description> <macros> - <token name="@TOOL_VERSION@">377</token> + <token name="@TOOL_VERSION@">469</token> </macros> <xrefs> <xref type="bio.tools">UCSC_Genome_Browser_Utilities</xref> @@ -102,9 +102,14 @@ <help><![CDATA[ **What it does** -`chainPreNet`_ is a tool to remove chains that don't have a chance of being netted +`chainPreNet`_ is a tool to remove `chains`_ that don't have a chance of being `netted`_. + +For implementation details see chainPreNet's `source code`_. .. _chainPreNet: http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/FOOTER.txt +.. _chains: https://genome.ucsc.edu/goldenPath/help/chain.html +.. _netted: https://genome.ucsc.edu/goldenPath/help/net.html +.. _source code: https://github.com/ucscGenomeBrowser/kent/blob/master/src/hg/mouseStuff/chainPreNet/chainPreNet.c ]]> </help> <citations> <citation type="doi">10.1093/bib/bbs038</citation>