Mercurial > repos > iuc > umi_tools_count

changeset 7:8250ea3a1501 draft

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"planemo upload commit 2da1197aac6a18df9252e5da096645d2ecaece88"
author iuc
date Wed, 10 Feb 2021 19:29:55 +0000
parents 276b4111b253
children e654095ab143
files test-data/stats_outputs_edit_distance.tsv test-data/stats_outputs_per_umi.tsv test-data/stats_outputs_per_umi_per_position.tsv
diffstat 3 files changed, 24 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/stats_outputs_edit_distance.tsv	Wed Feb 10 19:29:55 2021 +0000
@@ -0,0 +1,3 @@
+unique	unique_null	directional	directional_null	edit_distance
+491	491	491	491	Single_UMI
+0	0	0	0	0
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/stats_outputs_per_umi.tsv	Wed Feb 10 19:29:55 2021 +0000
@@ -0,0 +1,17 @@
+UMI	median_counts_pre	times_observed_pre	total_counts_pre	median_counts_post	times_observed_post	total_counts_post
+AA	1	34	35	1	34	35
+AC	1	35	35	1	35	35
+AG	1	25	25	1	25	25
+AT	1	50	50	1	50	50
+CA	1	27	27	1	27	27
+CC	1	21	21	1	21	21
+CG	1	11	11	1	11	11
+CT	1	23	24	1	23	24
+GA	1	24	24	1	24	24
+GC	1	23	23	1	23	23
+GG	1	31	32	1	31	32
+GT	1	27	28	1	27	28
+TA	1	61	63	1	61	63
+TC	1	24	24	1	24	24
+TG	1	27	27	1	27	27
+TT	1	48	48	1	48	48
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/stats_outputs_per_umi_per_position.tsv	Wed Feb 10 19:29:55 2021 +0000
@@ -0,0 +1,4 @@
+counts	instances_pre	instances_post
+1	486	486
+2	4	4
+3	1	1