Mercurial > repos > iuc > umi_tools_extract
diff test-data/out_paired.log @ 2:d1015c2516b7 draft
planemo upload commit eea727c3bdfe36d9d16036d5ab79fb8b27c4e82e
author | iuc |
---|---|
date | Wed, 10 Jan 2018 19:10:01 -0500 |
parents | 79436b3019e9 |
children |
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--- a/test-data/out_paired.log Tue Aug 29 17:37:07 2017 -0400 +++ b/test-data/out_paired.log Wed Jan 10 19:10:01 2018 -0500 @@ -1,6 +1,6 @@ -# output generated by extract --bc-pattern=NNNXXX --stdin=input_read1.gz --read2-in=input_read2.gz --stdout out1.gz --read2-out=out2.gz --log=/tmp/tmpREDhtd/files/003/dataset_3773.dat -# job started at Tue Aug 29 14:20:44 2017 on gaius -- 5913ff4c-b1d1-4f65-abec-66ca6684bdbd -# pid: 21437, system: Linux 4.10.0-33-generic #37-Ubuntu SMP Fri Aug 11 10:55:28 UTC 2017 x86_64 +# output generated by extract --bc-pattern=NNNXXX --stdin=input_read1.gz --read2-in=input_read2.gz --stdout out1.gz --read2-out=out2.gz --log=/tmp/tmpAvWtMd/files/000/dataset_20.dat +# job started at Wed Jan 3 17:06:39 2018 on tzk-ThinkPad-T450s -- 9eecaab6-9562-4b29-8a2e-ae6c1034a14c +# pid: 22903, system: Linux 4.10.0-42-generic #46~16.04.1-Ubuntu SMP Mon Dec 4 15:57:59 UTC 2017 x86_64 # blacklist : None # compresslevel : 6 # error_correct_cell : False @@ -21,16 +21,17 @@ # read2_stdout : False # reads_subset : None # reconcile : False +# retain_umi : None # short_help : None # stderr : <_io.TextIOWrapper name='<stderr>' mode='w' encoding='UTF-8'> # stdin : <_io.TextIOWrapper name='input_read1.gz' encoding='ascii'> -# stdlog : <_io.TextIOWrapper name='/tmp/tmpREDhtd/files/003/dataset_3773.dat' mode='a' encoding='UTF-8'> +# stdlog : <_io.TextIOWrapper name='/tmp/tmpAvWtMd/files/000/dataset_20.dat' mode='a' encoding='UTF-8'> # stdout : <_io.TextIOWrapper name='out1.gz' encoding='ascii'> # timeit_file : None # timeit_header : None # timeit_name : all # whitelist : None -2017-08-29 14:20:44,451 INFO Starting barcode extraction -2017-08-29 14:20:44,461 INFO Input Reads: 100 -2017-08-29 14:20:44,461 INFO Reads output: 100 -# job finished in 0 seconds at Tue Aug 29 14:20:44 2017 -- 0.73 0.05 0.00 0.00 -- 5913ff4c-b1d1-4f65-abec-66ca6684bdbd +2018-01-03 17:06:39,365 INFO Starting barcode extraction +2018-01-03 17:06:39,377 INFO Input Reads: 100 +2018-01-03 17:06:39,377 INFO Reads output: 100 +# job finished in 0 seconds at Wed Jan 3 17:06:39 2018 -- 0.60 0.05 0.00 0.00 -- 9eecaab6-9562-4b29-8a2e-ae6c1034a14c