Mercurial > repos > iuc > usher
diff test-data/test_13_path_mutations.tabular @ 4:568f7ae147ea draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/usher commit d44fdcd836306a2096d50bebb28d8faacdb0fbfd
| author | iuc |
|---|---|
| date | Mon, 02 Feb 2026 14:40:17 +0000 |
| parents | 524cb8f7a69a |
| children |
line wrap: on
line diff
--- a/test-data/test_13_path_mutations.tabular Sun Mar 17 18:10:07 2024 +0000 +++ b/test-data/test_13_path_mutations.tabular Mon Feb 02 14:40:17 2026 +0000 @@ -1,139 +1,138 @@ -sample_id path_from_root -England/MILK-9A8AB8/2020|20-08-31 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > C3602T,C6941T,C15324T,C21855T,A25505G,G25906C,G25996T,C28651T,C28869T (268) > G4442T,C6525T,A16044T (269) > C222T -England/CAMC-106415F/2021|21-01-15 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > C3602T,C6941T,C15324T,C21855T,A25505G,G25906C,G25996T,C28651T,C28869T (268) > G4504T,T8983G,G11761T,T12655C,C26461T,A28133T (271) > C12116T,C12459T,A23503T,A23989T,C24023T,G28899A -England/CAMC-C470F2/2020|20-12-10 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > C3602T,C6941T,C15324T,C21855T,A25505G,G25906C,G25996T,C28651T,C28869T (268) > G4504T,T8983G,G11761T,T12655C,C26461T,A28133T (271) > C6794T,C8814T,C13452T -Spain/R60/2020|LR884131.1|20-04-17 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > T19839C,G28881A,G28882A,G28883C (655) > G3849A,G27506T,C29203T -USA/CA-CZB-5682/2020|MW276261.1|20-07-23 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > T19839C,G28881A,G28882A,G28883C (655) > (655_polytomy_0) > A14424G,G18880T,C28057T,C29774T -England/QEUH-9C7EA8/2020|20-09-11 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > C3602T,C6941T,C15324T,C21855T,A25505G,G25906C,G25996T,C28651T,C28869T (268) > G4442T,C6525T,A16044T (269) > G2407T,T2924C,G11761T -Scotland/QEUH-9D11C0/2020|20-09-16 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > T4195A,C10977T,G25049T,G25062T,C26151T,C28657T,C29366T (365) > C24334T -England/QEUH-A0077A/2020|20-10-02 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > T4195A,C10977T,G25049T,G25062T,C26151T,C28657T,C29366T (365) > C6027T,T10977C,A25327G -England/ALDP-AA0ED1/2020|20-10-22 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > C445T,G28079T -England/QEUH-A4CF6B/2020|20-10-05 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > C4534T,C5544T -Switzerland/270068/2020|LR882987.1|20-09-02 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > C13671T,C14805T,G17278T,A20284T,T20285C,A27755T (381) > G17058T -Switzerland/332169/2020|LR898966.1|20-10-22 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > C13671T,C14805T,G17278T,A20284T,T20285C,A27755T (381) > G21830T,C27881T -England/MILK-ABB8D5/2020|20-10-21 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > (361_polytomy_3) > C28310A (385) > C9857A,A28304T -England/NORT-2884A8/2020|20-11-22 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > (361_polytomy_3) > C28310A (385) > C6525T,C10376T,G17032A,C23557T,C24106T -England/QEUH-AD0DDB/2020|20-10-26 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > (361_polytomy_3) > (361_polytomy_4) > (361_polytomy_5) > C5170T,C10078T,G11132T,G11417T,G22051T,G29179T (393) > G14187A,A25948T,C29274T -Wales/MILK-9E3240/2020|20-09-21 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > (361_polytomy_3) > (361_polytomy_4) > (361_polytomy_5) > C5170T,C10078T,G11132T,G11417T,G22051T,G29179T (393) > A9409G,T29604C -England/CAMC-949688/2020|20-07-27 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > (427_polytomy_2) > (427_polytomy_3) > G625T,C13665T,C15960T,G16741T,C26464T,G29747T,C29750T (558) > T3694C,G20580T -England/SHEF-C3AED/2020|20-07-30 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > (427_polytomy_2) > (427_polytomy_3) > G625T,C13665T,C15960T,G16741T,C26464T,G29747T,C29750T (558) > C401T,T1438C -England/MILK-99D755/2020|20-08-31 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > (427_polytomy_2) > (427_polytomy_3) > (427_polytomy_4) > T505C,G872T,C3261T,T7783C,A15984T,C20946T,C22075T,G25552T,C27945T,G28221T,C29750T (563) > T4303C,C25553T,G25599T -England/MILK-99D764/2020|20-08-31 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > (427_polytomy_2) > (427_polytomy_3) > (427_polytomy_4) > T505C,G872T,C3261T,T7783C,A15984T,C20946T,C22075T,G25552T,C27945T,G28221T,C29750T (563) > G20125A,G22484T -Wales/PHWC-48212D/2020|20-10-20 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > (427_polytomy_2) > (427_polytomy_3) > (427_polytomy_4) > (427_polytomy_5) > (427_polytomy_6) > (427_polytomy_7) > A1163T,T3256C,C5622T,G14202T,G19542T,C19718T,C22388T,C26060T,G29227T,C29466T,A29771G (631) > G22381T,C26029A -England/QEUH-9C80B0/2020|20-09-10 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > (427_polytomy_2) > (427_polytomy_3) > (427_polytomy_4) > (427_polytomy_5) > (427_polytomy_6) > (427_polytomy_7) > A1163T,T3256C,C5622T,G14202T,G19542T,C19718T,C22388T,C26060T,G29227T,C29466T,A29771G (631) > G22471T,T22896C -England/MILK-A06194/2020|20-10-01 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > T19839C,G28881A,G28882A,G28883C (655) > (655_polytomy_0) > C4321T,T8800C,T15801C,C17746T,C26801T,G27703T,C28320T (656) > C12513T,T29059C -England/CAMC-B32AA2/2020|20-11-05 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > T19839C,G28881A,G28882A,G28883C (655) > (655_polytomy_0) > C4321T,T8800C,T15801C,C17746T,C26801T,G27703T,C28320T (656) > G14528A,C16393T,T16695G,C24023T -USA/AK-PHL660/2020|MW173157.1|20-06-27 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C1059T (61) > (61_polytomy_0) > C10319T,A18424G,C21304T,G25907T,C27964T,C28472T,C28869T (109) > A16872C -England/LOND-DC4E3/2020|20-11-04 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > G1659T,C3884T,C20199T,C26139T,T27634C,G28975T (217) > A11923G,G19009T,C20233T,T21976C,C26645T -England/MILK-99D3AC/2020|20-08-31 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > G1659T,C3884T,C20199T,C26139T,T27634C,G28975T (217) > G6446T,C9811T,C21234A,C22713T,C29580T -England/PHEC-1491AD/2020|20-10-17 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C4543T,G9526T,C11497T,G15766T,A16889G,G17019T,G22992A,C25710T,T26876C,G28975C,G29399A (238) > G4006T,T18877C,T25563G -England/QEUH-9B3A8D/2020|20-09-04 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > (366_polytomy_2) > C10507T,C11152T,C11824T,A18840G,G23309C,G26918T,G27589A,G28436T (375) > T11152C,T11824C -England/NORW-F1F9C/2020|20-10-24 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > (366_polytomy_2) > C10507T,C11152T,C11824T,A18840G,G23309C,G26918T,G27589A,G28436T (375) > C203T,C5183T,A8031G,C9207T,C25521T,G26690T -England/PHEC-14E15D/2020|20-12-09 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > (366_polytomy_2) > (366_polytomy_3) > A1866G,A6889C,C12923T,C18029T,C19269T,A27137G (380) > C20178T -England/PHEC-149635/2020|20-10-28 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > (366_polytomy_2) > (366_polytomy_3) > A1866G,A6889C,C12923T,C18029T,C19269T,A27137G (380) > -England/ALDP-A95DE1/2020|20-10-20 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > A408G (382) > C22088T,C29686T (383) > G21193T,G24794T,G25135T,G26801C,T26843C -England/ALDP-9E75E9/2020|20-09-25 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > A408G (382) > C22088T,C29686T (383) > G2764T -England/MILK-AC7B0A/2020|20-10-21 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > A408G (382) > G27877T (384) > C7528T,G24098T,C28315T,G28939T -England/NOTT-11336A/2020|20-09-16 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > A408G (382) > G27877T (384) > G713A,A21127G,T26163C -England/MILK-A799FE/2020|20-10-15 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > (361_polytomy_3) > (361_polytomy_4) > G23311C (386) > T29185A (387) > A2658G,C17004T,C17125T -England/CAMC-A417F5/2020|20-10-06 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > (361_polytomy_3) > (361_polytomy_4) > G23311C (386) > T29185A (387) > T23062C,G27459T,G29755T -England/QEUH-AE2A48/2020|20-10-26 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > (361_polytomy_3) > (361_polytomy_4) > G23311C (386) > (386_polytomy_0) > C10626T (388) > C6114A,T17208C -England/ALDP-A68CF9/2020|20-10-12 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > (361_polytomy_3) > (361_polytomy_4) > G23311C (386) > (386_polytomy_0) > C10626T (388) > G6476T -England/CAMB-1B6439/2020|20-09-22 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > (361_polytomy_3) > (361_polytomy_4) > G23311C (386) > (386_polytomy_0) > G25440T,C27752T (389) > A10323G,C28310A -England/MILK-9F1898/2020|20-09-25 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > (361_polytomy_3) > (361_polytomy_4) > G23311C (386) > (386_polytomy_0) > G25440T,C27752T (389) > C5239T -England/MILK-A7CDC2/2020|20-10-13 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > (361_polytomy_3) > (361_polytomy_4) > (361_polytomy_5) > G22346T (390) > G28321A (391) > G10996T,G24867T -England/CAMC-A5845E/2020|20-10-08 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > (361_polytomy_3) > (361_polytomy_4) > (361_polytomy_5) > G22346T (390) > G28321A (391) > C13009T,G17721T,G18462T,C21234T,G23675C -England/ALDP-AA10DA/2020|20-10-22 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > (361_polytomy_3) > (361_polytomy_4) > (361_polytomy_5) > G22346T (390) > G21800T,A22053C (392) > T7549C,C9073T,G10870T -Wales/PHWC-4815AA/2020|20-10-13 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > (361_polytomy_1) > (361_polytomy_2) > (361_polytomy_3) > (361_polytomy_4) > (361_polytomy_5) > G22346T (390) > G21800T,A22053C (392) > C12049T -England/QEUH-962E81/2020|20-08-10 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > (427_polytomy_2) > C313T (521) > G10886A,G17278T,C18032T,G18105T,G18662C,C23625T,A25910G (528) > G24755T,A27973G -England/QEUH-96E605/2020|20-08-17 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > (427_polytomy_2) > C313T (521) > G10886A,G17278T,C18032T,G18105T,G18662C,C23625T,A25910G (528) > C2841T -Japan/TKYE622411_2020/2020|LC593808.1|20-07 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > (427_polytomy_2) > C313T (521) > C8917T,C18167T,G21518T,G28975T,G29773T -England/CAMC-B36516/2020|20-11-05 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > (427_polytomy_2) > (427_polytomy_3) > (427_polytomy_4) > (427_polytomy_5) > (427_polytomy_6) > C913T,C3267T,C5388A,C5986T,T6954C,C14676T,C15279T,T16176C,A23063T,C23271A,C23604A,C23709T,T24506G,G24914C,C27972T,G28048T,A28111G,G28280C,A28281T,T28282A,C28977T (618) > G174T,G210T,C2453T (619) > C2918T -England/CAMC-B362D3/2020|20-11-05 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > (427_polytomy_2) > (427_polytomy_3) > (427_polytomy_4) > (427_polytomy_5) > (427_polytomy_6) > C913T,C3267T,C5388A,C5986T,T6954C,C14676T,C15279T,T16176C,A23063T,C23271A,C23604A,C23709T,T24506G,G24914C,C27972T,G28048T,A28111G,G28280C,A28281T,T28282A,C28977T (618) > G174T,G210T,C2453T (619) > C29311T -England/MILK-B3A284/2020|20-11-01 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > (427_polytomy_2) > (427_polytomy_3) > (427_polytomy_4) > (427_polytomy_5) > (427_polytomy_6) > C913T,C3267T,C5388A,C5986T,T6954C,C14676T,C15279T,T16176C,A23063T,C23271A,C23604A,C23709T,T24506G,G24914C,C27972T,G28048T,A28111G,G28280C,A28281T,T28282A,C28977T (618) > T8603C,A17615G,G25437T (620) > C27046T -England/CAMC-B365AD/2020|20-11-05 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > (427_polytomy_2) > (427_polytomy_3) > (427_polytomy_4) > (427_polytomy_5) > (427_polytomy_6) > C913T,C3267T,C5388A,C5986T,T6954C,C14676T,C15279T,T16176C,A23063T,C23271A,C23604A,C23709T,T24506G,G24914C,C27972T,G28048T,A28111G,G28280C,A28281T,T28282A,C28977T (618) > T8603C,A17615G,G25437T (620) > T19232C -covid_hub_pl_ibch_0157|LR991987.1|20-05-19 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > (427_polytomy_2) > (427_polytomy_3) > (427_polytomy_4) > (427_polytomy_5) > (427_polytomy_6) > (427_polytomy_7) > G5572A,A6366T,G11410A,C19488T,G25776T (626) > A4228G,A11410G,G23403A -Poland/1/2020|LR899030.1|20-05-20 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > (427_polytomy_2) > (427_polytomy_3) > (427_polytomy_4) > (427_polytomy_5) > (427_polytomy_6) > (427_polytomy_7) > G5572A,A6366T,G11410A,C19488T,G25776T (626) > T241C,T9440G,G17964T,T19488C,G29747T -England/MILK-6166F0/2020|20-07-05 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C1059T (61) > C66A,C4455T,C7768T,A8773G,C11916T,C17304T,C18998T,T24805C,C26270T,G29540A (99) > T22912G -England/ALDP-9BCA93/2020|20-09-09 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C1059T (61) > C66A,C4455T,C7768T,A8773G,C11916T,C17304T,C18998T,T24805C,C26270T,G29540A (99) > C782T,G1210T,C28045T -USA/WI-UW-1194/2020|MT981478.1|20-08-11 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C1059T (61) > (61_polytomy_0) > C10319T,A18424G,C21304T,G25907T,C27964T,C28472T,C28869T (109) > G9928T (110) > C10377T -USA/CA-CZB-3284/2020|MW134086.1|20-07-17 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C1059T (61) > (61_polytomy_0) > C10319T,A18424G,C21304T,G25907T,C27964T,C28472T,C28869T (109) > G9928T (110) > A16148G,C16928T,G29422T -USA/CA-QDX-2817/2020|MW460624.1|20-12-26 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C1059T (61) > (61_polytomy_0) > G17014T,G21600T,G22018T,T22917G,C26681T,A28272T,C28887T,C29362T (135) > G9738C,G13713A,C16394T (136) > A9492C,C21638T,C25919T -USA/CA-QDX-2803/2020|MW460610.1|20-12-26 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C1059T (61) > (61_polytomy_0) > G17014T,G21600T,G22018T,T22917G,C26681T,A28272T,C28887T,C29362T (135) > G9738C,G13713A,C16394T (136) > C11345T,C13860T -England/SHEF-CDD62/2020|20-05-27 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > T241C,A8821G,C15752T,G24197T,T26066C (216) > C25665T,T28098C,G29254T -England/SHEF-10B22B9/2020|20-04-20 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > T241C,A8821G,C15752T,G24197T,T26066C (216) > G3482A -England/QEUH-9B703C/2020|20-09-09 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C22444T,C28854T (223) > (223_polytomy_0) > (223_polytomy_1) > C6312T,C12513T,G14122T,A20559G,C23127T,T26876C,C28311T,A28900C (232) > C25466A,C25614T,A29101G -England/MILK-970CE0/2020|20-08-18 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C22444T,C28854T (223) > (223_polytomy_0) > (223_polytomy_1) > C6312T,C12513T,G14122T,A20559G,C23127T,T26876C,C28311T,A28900C (232) > G26389T -England/SHEF-10C9BD2/2020|20-12-20 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C22444T,C28854T (223) > (223_polytomy_0) > (223_polytomy_1) > A749G,C2113T,C6268A,C6701T,C7318T,C9438T,C14724T,A17637G,C20555T,C21660A,G22201T,C22480A,G23522C,A25856C (235) > C15081T,A19963G -England/SHEF-10CC3AA/2020|20-12-17 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C22444T,C28854T (223) > (223_polytomy_0) > (223_polytomy_1) > A749G,C2113T,C6268A,C6701T,C7318T,C9438T,C14724T,A17637G,C20555T,C21660A,G22201T,C22480A,G23522C,A25856C (235) > C1420T -England/MILK-A1BC04/2020|20-10-03 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C4543T,G9526T,C11497T,G15766T,A16889G,G17019T,G22992A,C25710T,T26876C,G28975C,G29399A (238) > G13993T (239) > G204T,T961C,G6288T,T9651G,T13880C,C16163T,A22992G,C27263T,C28975G,A29399G -England/ALDP-9BE8B5/2020|20-09-09 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > G204T (367) > T16242A (368) > G28745A -Scotland/EDB10724/2020|20-12-04 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > G204T (367) > T16242A (368) > C2509T,C10615T,T12134C,C21365T,C22987T -Scotland/CVR4309/2020|20-09-14 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > G204T (367) > C21614T (369) > C7471T -England/QEUH-AE4EA4/2020|20-10-27 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > (366_polytomy_2) > (366_polytomy_3) > A1987G (376) > T14721C,T25519G (377) > C26894T,T28277C,A28612G -England/ALDP-9BECB9/2020|20-09-10 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > (366_polytomy_2) > (366_polytomy_3) > A1987G (376) > T14721C,T25519G (377) > C23029T -Wales/PHWC-16E6A3/2020|20-10-02 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > (366_polytomy_2) > (366_polytomy_3) > A1987G (376) > (376_polytomy_0) > G6344T (378) > C3768T,C5031T,C18555T,T20976C -England/MILK-9A9D09/2020|20-09-01 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > (366_polytomy_2) > (366_polytomy_3) > A1987G (376) > (376_polytomy_0) > G6344T (378) > A1230G -England/QEUH-B6C0E9/2020|20-11-11 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > (366_polytomy_2) > (366_polytomy_3) > A1987G (376) > (376_polytomy_0) > C66T,G10870T,A11781G,C25614T (379) > C5730T,C14318T,C23644T,C29739T -England/CAMC-AEA62E/2020|20-10-25 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > (366_polytomy_2) > (366_polytomy_3) > A1987G (376) > (376_polytomy_0) > C66T,G10870T,A11781G,C25614T (379) > C18329T -England/MILK-11A5634/2021|21-01-29 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > T19839C (429) > C14340T,G17551A,C18877T,A19167G,C19274A,G22017T,G23012A,G23868T,T25713C,T26604C,C27213T,C28833T,G29527T (438) > C683T,C11747T,G22022A,T24991A,T25039C -GHA/nmimr-SARS-CoV-2-TRA-182/2021|MW598412.1|21-01-12 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > T19839C (429) > C14340T,G17551A,C18877T,A19167G,C19274A,G22017T,G23012A,G23868T,T25713C,T26604C,C27213T,C28833T,G29527T (438) > C5796T,C9360T -USA/MA-Broad_CRSP-00367/2021|MW599505.1|21-01-08 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > T19839C (429) > C3411T,G3871T,C4999T,A5040G,A12519G,G14371T,C15240T,C21757T,G23012A,G23593C,A23756T,A25048G,G25166C,G29751T (443) > C22264T -USA/MA-MGH-03951/2021|MW617773.1|21-01-22 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > T19839C (429) > C3411T,G3871T,C4999T,A5040G,A12519G,G14371T,C15240T,C21757T,G23012A,G23593C,A23756T,A25048G,G25166C,G29751T (443) > T27824C -USA/CO-CDC-STM-000008403/2021|MW617544.1|21-01-31 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > C4002T,G10097A,C13536T,C23731T (500) > G3302A,C9693T,C11758T,C12789T,T22917G,G29422T (506) > A235C,T1921C,C22522T,C29259T -England/LOND-12F65DC/2021|21-01-19 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > C4002T,G10097A,C13536T,C23731T (500) > G3302A,C9693T,C11758T,C12789T,T22917G,G29422T (506) > G8591T,G15906T,A18594G,G23868T,G25906T,C26060T,G28079A,T28124C,T28723C,G29260T,G29543T -Switzerland/310500/2020|LR898805.1|20-10-08 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > C4002T,G10097A,C13536T,C23731T (500) > G2995T,T4871C,C6449T,C10252T,C19366T,T27808C (507) > C9286T,G18210T,C21306T,G28541T -Switzerland/300433/2020|LR898634.1|20-09-29 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > C4002T,G10097A,C13536T,C23731T (500) > G2995T,T4871C,C6449T,C10252T,C19366T,T27808C (507) > G27382T -England/MILK-9A699F/2020|20-09-01 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > G1820A,C3373A,C6883T,G21724A,G28003C (515) > C1457T,G3286A,C8290T,C8626T,C9298T,C24378T,G26648A,C28657T -England/CAMC-947392/2020|20-07-18 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > (427_polytomy_2) > (427_polytomy_3) > (427_polytomy_4) > (427_polytomy_5) > C7843T,G15438T,C25207T,G26918T,C28453T,T29464C (573) > T25949C -England/MILK-977469/2020|20-07-24 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > (427_polytomy_2) > (427_polytomy_3) > (427_polytomy_4) > (427_polytomy_5) > C7843T,G15438T,C25207T,G26918T,C28453T,T29464C (573) > C2536T,T7843C,C8318A,T26160C -USA/CA-LACPHL-AF00169/2021|MW485829.1|21-01-08 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C1059T (61) > (61_polytomy_0) > G17014T,G21600T,G22018T,T22917G,C26681T,A28272T,C28887T,C29362T (135) > C2395T,T2597C,C8947T,C12100T,A12878G,T24349C,G27890T (138) > C1380T,C6539T,T7813C,A10417G,A19476G,C21638T,G22708T,G28628T,T29362C -USA/CA-LACPHL-AF00029/2020|MW424876.1|20-12-20 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C1059T (61) > (61_polytomy_0) > G17014T,G21600T,G22018T,T22917G,C26681T,A28272T,C28887T,C29362T (135) > C2395T,T2597C,C8947T,C12100T,A12878G,T24349C,G27890T (138) > C1601T,C4918T -England/CAMC-A65DDB/2020|20-10-11 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C22444T,C28854T (223) > T1947C (224) > G2659T,G5008T,G19549T,G22918T,C25349A,G25947C,G26062T (225) > T22918G -England/CAMC-AAF5A0/2020|20-10-22 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C22444T,C28854T (223) > T1947C (224) > G2659T,G5008T,G19549T,G22918T,C25349A,G25947C,G26062T (225) > C4672T,C8605T,C11003T -England/MILK-ABBF2B/2020|20-10-22 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C22444T,C28854T (223) > T1947C (224) > (224_polytomy_0) > C7528T,C29555T (227) > C10474T,C13536T -England/QEUH-96A85E/2020|20-08-14 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C22444T,C28854T (223) > T1947C (224) > (224_polytomy_0) > C7528T,C29555T (227) > T23986C -HongKong/Homo-sapiens/HKG/Case5132/2020|MW181761.1|20-10-06 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C22444T,C28854T (223) > T1947C (224) > (224_polytomy_0) > G922A,G3431T,T5653C,G5950A,C7504T,T24175C,C26060T (228) > C14724T -HongKong/Homo-sapiens/HKG/Case5126/2020|MW181753.1|20-10-06 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C22444T,C28854T (223) > T1947C (224) > (224_polytomy_0) > G922A,G3431T,T5653C,G5950A,C7504T,T24175C,C26060T (228) > A6391G -England/PHEC-149F0D/2020|20-11-19 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C22444T,C28854T (223) > (223_polytomy_0) > C2836T,G21724T (229) > C1122T,T2836C,T4057C,G6077T,A10323G,G13858T,C27092T,C27434T,G28975T (230) > -England/MILK-BE717A/2020|20-11-29 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C22444T,C28854T (223) > (223_polytomy_0) > C2836T,G21724T (229) > C1122T,T2836C,T4057C,G6077T,A10323G,G13858T,C27092T,C27434T,G28975T (230) > C11003T,C26404T,G26754A -CAN/COVID_CRCHUM_Pre_Freeze_6/2020|MW309430.1|20-09-04 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C22444T,C28854T (223) > (223_polytomy_0) > C2836T,G21724T (229) > G61T,C913T,C1541T,C11259T,C25000T,G26144A,G26849T,C29358T (231) > C9745T,C10440T -Scotland/QEUH-BEAF22/2020|20-12-04 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C22444T,C28854T (223) > (223_polytomy_0) > C2836T,G21724T (229) > G61T,C913T,C1541T,C11259T,C25000T,G26144A,G26849T,C29358T (231) > G4105T,C4754T,C5730T,C21597T,T21841A -England/MILK-A230C1/2020|20-10-03 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C4543T,G9526T,C11497T,G15766T,A16889G,G17019T,G22992A,C25710T,T26876C,G28975C,G29399A (238) > G13993T (239) > G5629T (240) > A2175G -Northern_Ireland/QEUH-969C53/2020|20-08-14 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > G1464A,A10978T,T20799C (335) > G5572T,G28375T (336) > C19545T,C26408T -England/ALDP-9E79B0/2020|20-09-24 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > G1464A,A10978T,T20799C (335) > G18803T (338) > C5817T,T10321C,A10724G,C16469T,C21635T,G25320T -England/MILK-B561FE/2020|20-11-06 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > G1464A,A10978T,T20799C (335) > G18803T (338) > C1288T,T16213C,A23631G,C26681T,G27882T -England/CAMC-9DFBC4/2020|20-09-21 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > G204T (367) > C21614T (369) > (369_polytomy_0) > C6317T (370) > G9658T,T21841C -England/QEUH-AD1165/2020|20-10-25 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > G204T (367) > C21614T (369) > (369_polytomy_0) > C6317T (370) > C4795T,T5471C,A21631T -England/ALDP-FB5E3E/2021|21-01-11 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > G204T (367) > C21614T (369) > (369_polytomy_0) > (369_polytomy_1) > G17944T,C24334T,T24814C,C27769T (371) > G1141A,T11522G,A13315G,C18744T,T21973C -England/ALDP-E8756E/2021|21-01-04 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > G204T (367) > C21614T (369) > (369_polytomy_0) > (369_polytomy_1) > G17944T,C24334T,T24814C,C27769T (371) > C12781T,G17632A,C28453T -England/ALDP-A2EAE6/2020|20-10-05 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > G204T (367) > C21614T (369) > (369_polytomy_0) > (369_polytomy_1) > (369_polytomy_2) > T24769C,C25460T (372) > C337T,T21294A,G21295A,G21296A,A25008G -Scotland/QEUH-A636C3/2020|20-10-10 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > G204T (367) > C21614T (369) > (369_polytomy_0) > (369_polytomy_1) > (369_polytomy_2) > T24769C,C25460T (372) > C593T,T26903C,C26936T -England/QEUH-A76C07/2020|20-10-12 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > G204T (367) > C21614T (369) > (369_polytomy_0) > (369_polytomy_1) > (369_polytomy_2) > (369_polytomy_3) > C15480T (373) > G21777A -England/MILK-AC7997/2020|20-10-21 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > G204T (367) > C21614T (369) > (369_polytomy_0) > (369_polytomy_1) > (369_polytomy_2) > (369_polytomy_3) > C15480T (373) > C125T -Scotland/QEUH-9DC927/2020|20-09-22 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > G204T (367) > C21614T (369) > (369_polytomy_0) > (369_polytomy_1) > (369_polytomy_2) > (369_polytomy_3) > G8179T (374) > C4794T,T8179G,G23006A -Scotland/QEUH-9B75D3/2020|20-09-04 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > T445C,C6286T,G21255C,C22227T,C26801G,C28932T,G29645T (361) > (361_polytomy_0) > C27944T (366) > (366_polytomy_0) > (366_polytomy_1) > G204T (367) > C21614T (369) > (369_polytomy_0) > (369_polytomy_1) > (369_polytomy_2) > (369_polytomy_3) > G8179T (374) > G29778T -England/CAMC-AEACFF/2020|20-10-25 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > G1820A,C3373A,C6883T,G21724A,G28003C (515) > C12249T (516) > C3141T,C4683T,C8683T,C17690T,T19935C,C24130T,A27979G -England/MILK-97356A/2020|20-08-14 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C4543T,G9526T,C11497T,G15766T,A16889G,G17019T,G22992A,C25710T,T26876C,G28975C,G29399A (238) > G13993T (239) > G5629T (240) > (241) > C15720T -England/MILK-9A9F7C/2020|20-08-31 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > C27800A (319) > C4893T,C7844T,T24925C,C27920T,C29762T (321) > G19879A,C25433T -England/OXON-F42364/2020|20-12-18 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > C27800A (319) > C4893T,C7844T,T24925C,C27920T,C29762T (321) > G1306T,G4510T,T8662C,C8733T,C18032T -England/MILK-9C2766/2020|20-09-10 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > G1464A,A10978T,T20799C (335) > G5572T,G28375T (336) > G2072A,C27294T (337) > T22189C,G27382C,A27383T,T27384C -England/ALDP-A95A9F/2020|20-10-19 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > G1464A,A10978T,T20799C (335) > G5572T,G28375T (336) > G2072A,C27294T (337) > T14499C,C17118T,C23854T,A27865T,T27866A -England/PHEC-149FA3/2020|20-11-20 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > G1820A,C3373A,C6883T,G21724A,G28003C (515) > C12249T (516) > G3431T,T25577C,C25626T,C27002T (517) > G3433A,G8084A,C11941T,C18555T,A26174C -England/QEUH-C9332B/2020|20-12-17 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > (28_polytomy_2) > (28_polytomy_3) > G28881A,G28882A,G28883C (427) > (427_polytomy_0) > (427_polytomy_1) > G1820A,C3373A,C6883T,G21724A,G28003C (515) > C12249T (516) > G3431T,T25577C,C25626T,C27002T (517) > G9314A,C13605T,G14490A -England/CAMC-A649C9/2020|20-10-10 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C4543T,G9526T,C11497T,G15766T,A16889G,G17019T,G22992A,C25710T,T26876C,G28975C,G29399A (238) > G13993T (239) > G5629T (240) > (241) > C556T,C23525T (242) > C6813T,C13620T -England/MILK-B04890/2020|20-10-24 C241T,C3037T,C14408T,A23403G (28) > G25563T (53) > C18877T,C26735T (212) > (212_polytomy_0) > (212_polytomy_1) > C4543T,G9526T,C11497T,G15766T,A16889G,G17019T,G22992A,C25710T,T26876C,G28975C,G29399A (238) > G13993T (239) > G5629T (240) > (241) > C556T,C23525T (242) > G8371A,C23679T -England/CAMC-A57F03/2020|20-10-09 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > C27800A (319) > G12988T,G15598A,G18028T,T24910C,T26972C (322) > G25494T (323) > C25386T (324) > T505C,A2419G,G17058T -England/MILK-A7D15C/2020|20-10-13 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > C27800A (319) > G12988T,G15598A,G18028T,T24910C,T26972C (322) > G25494T (323) > C25386T (324) > C21302T,C21304A,C26256T,C27119T,C28453T -Wales/PHWC-47F3A5/2020|20-10-07 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > C27800A (319) > G12988T,G15598A,G18028T,T24910C,T26972C (322) > G25494T (323) > G28817T (325) > T9655C,G28198T -England/ALDP-A85BCC/2020|20-10-17 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > C27800A (319) > G12988T,G15598A,G18028T,T24910C,T26972C (322) > G25494T (323) > G28817T (325) > T209C,T11857C -England/ALDP-A2FCA3/2020|20-10-05 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > C27800A (319) > G12988T,G15598A,G18028T,T24910C,T26972C (322) > (322_polytomy_0) > C20451T,G21770A (326) > T7919G (327) > C24734T -Scotland/MILK-A69E6B/2020|20-10-09 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > C27800A (319) > G12988T,G15598A,G18028T,T24910C,T26972C (322) > (322_polytomy_0) > C20451T,G21770A (326) > T7919G (327) > A28483G,A28877G -England/MILK-A7D1A7/2020|20-10-13 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > C27800A (319) > G12988T,G15598A,G18028T,T24910C,T26972C (322) > (322_polytomy_0) > C20451T,G21770A (326) > G18583A (328) > T4579A,T27835C -England/MILK-A91486/2020|20-10-16 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > C27800A (319) > G12988T,G15598A,G18028T,T24910C,T26972C (322) > (322_polytomy_0) > C20451T,G21770A (326) > G18583A (328) > G2272T,G20679T,G24586T -AUT/2021006354/2021|MW672357.1|21-02 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > C27800A (319) > G12988T,G15598A,G18028T,T24910C,T26972C (322) > (322_polytomy_0) > C16394T,C22127T,G23876A,G25947T (329) > C829T,C14697T,C18176T,G19398T,G28083T,G28975T (333) > C878T,C12374T,C20384T,C21639T,C29367T -England/MILK-E7F4C6/2021|21-01-02 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > C27800A (319) > G12988T,G15598A,G18028T,T24910C,T26972C (322) > (322_polytomy_0) > C16394T,C22127T,G23876A,G25947T (329) > C829T,C14697T,C18176T,G19398T,G28083T,G28975T (333) > T9070C,C10296T -England/ALDP-AA169C/2020|20-10-22 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > C27800A (319) > G12988T,G15598A,G18028T,T24910C,T26972C (322) > (322_polytomy_0) > C16394T,C22127T,G23876A,G25947T (329) > C29274T (330) > G25218T (331) > C23191T,G23909A -England/MILK-A474DA/2020|20-10-06 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > C27800A (319) > G12988T,G15598A,G18028T,T24910C,T26972C (322) > (322_polytomy_0) > C16394T,C22127T,G23876A,G25947T (329) > C29274T (330) > G25218T (331) > A6659G -England/ALDP-B483EA/2020|20-11-07 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > C27800A (319) > G12988T,G15598A,G18028T,T24910C,T26972C (322) > (322_polytomy_0) > C16394T,C22127T,G23876A,G25947T (329) > C29274T (330) > T8110C (332) > C10039A,T18402C,C29738T -England/QEUH-AA0035/2020|20-10-20 C241T,C3037T,C14408T,A23403G (28) > (28_polytomy_0) > (28_polytomy_1) > T7767C,C8047T,C17104T,A20268G,C22879A,G29734C (318) > C27800A (319) > G12988T,G15598A,G18028T,T24910C,T26972C (322) > (322_polytomy_0) > C16394T,C22127T,G23876A,G25947T (329) > C29274T (330) > T8110C (332) > G11417T +England/MILK-9A8AB8/2020|20-08-31 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_268:C3602T,C6941T,C15324T,C21855T,A25505G,G25906C,G25996T,C28651T,C28869T node_269:G4442T,C6525T,A16044T England/MILK-9A8AB8/2020|20-08-31:C222T +England/CAMC-106415F/2021|21-01-15 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_268:C3602T,C6941T,C15324T,C21855T,A25505G,G25906C,G25996T,C28651T,C28869T node_271:G4504T,T8983G,G11761T,T12655C,C26461T,A28133T England/CAMC-106415F/2021|21-01-15:C12116T,C12459T,A23503T,A23989T,C24023T,G28899A +England/CAMC-C470F2/2020|20-12-10 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_268:C3602T,C6941T,C15324T,C21855T,A25505G,G25906C,G25996T,C28651T,C28869T node_271:G4504T,T8983G,G11761T,T12655C,C26461T,A28133T England/CAMC-C470F2/2020|20-12-10:C6794T,C8814T,C13452T +Spain/R60/2020|LR884131.1|20-04-17 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_654:C15933T,G16968T,T19839C,G28881A,G28882A,G28883C,C29784T node_655:T15933C,T16968G,T29784C Spain/R60/2020|LR884131.1|20-04-17:G3849A,G27506T,C29203T +USA/CA-CZB-5682/2020|MW276261.1|20-07-23 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_654:C15933T,G16968T,T19839C,G28881A,G28882A,G28883C,C29784T node_655:T15933C,T16968G,T29784C USA/CA-CZB-5682/2020|MW276261.1|20-07-23:A14424G,G18880T,C28057T,C29774T +England/QEUH-9C7EA8/2020|20-09-11 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_268:C3602T,C6941T,C15324T,C21855T,A25505G,G25906C,G25996T,C28651T,C28869T node_269:G4442T,C6525T,A16044T node_270:G2407T,G11761T England/QEUH-9C7EA8/2020|20-09-11:T2924C +Scotland/QEUH-9D11C0/2020|20-09-16 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_365:T4195A,C10977T,G25049T,G25062T,C26151T,C28657T,C29366T Scotland/QEUH-9D11C0/2020|20-09-16:C24334T +England/QEUH-A0077A/2020|20-10-02 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_365:T4195A,C10977T,G25049T,G25062T,C26151T,C28657T,C29366T England/QEUH-A0077A/2020|20-10-02:C6027T,T10977C,A25327G +England/ALDP-AA0ED1/2020|20-10-22 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T England/ALDP-AA0ED1/2020|20-10-22:C445T,G28079T +England/QEUH-A4CF6B/2020|20-10-05 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T England/QEUH-A4CF6B/2020|20-10-05:C4534T,C5544T +Switzerland/270068/2020|LR882987.1|20-09-02 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_381:C13671T,C14805T,G17278T,A20284T,T20285C,A27755T Switzerland/270068/2020|LR882987.1|20-09-02:G17058T +Switzerland/332169/2020|LR898966.1|20-10-22 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_381:C13671T,C14805T,G17278T,A20284T,T20285C,A27755T Switzerland/332169/2020|LR898966.1|20-10-22:G21830T,C27881T +England/MILK-ABB8D5/2020|20-10-21 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_385:C28310A England/MILK-ABB8D5/2020|20-10-21:C9857A,A28304T +England/NORT-2884A8/2020|20-11-22 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_385:C28310A England/NORT-2884A8/2020|20-11-22:C6525T,C10376T,G17032A,C23557T,C24106T +England/QEUH-AD0DDB/2020|20-10-26 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_393:C5170T,C10078T,G11132T,G11417T,G22051T,G29179T England/QEUH-AD0DDB/2020|20-10-26:G14187A,A25948T,C29274T +Wales/MILK-9E3240/2020|20-09-21 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_393:C5170T,C10078T,G11132T,G11417T,G22051T,G29179T Wales/MILK-9E3240/2020|20-09-21:A9409G,T29604C +England/CAMC-949688/2020|20-07-27 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_558:G625T,C13665T,C15960T,G16741T,C26464T,G29747T,C29750T England/CAMC-949688/2020|20-07-27:T3694C,G20580T +England/SHEF-C3AED/2020|20-07-30 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_558:G625T,C13665T,C15960T,G16741T,C26464T,G29747T,C29750T England/SHEF-C3AED/2020|20-07-30:C401T,T1438C +England/MILK-99D755/2020|20-08-31 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_563:T505C,G872T,C3261T,T7783C,A15984T,C20946T,C22075T,G25552T,C27945T,G28221T,C29750T England/MILK-99D755/2020|20-08-31:T4303C,C25553T,G25599T +England/MILK-99D764/2020|20-08-31 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_563:T505C,G872T,C3261T,T7783C,A15984T,C20946T,C22075T,G25552T,C27945T,G28221T,C29750T England/MILK-99D764/2020|20-08-31:G20125A,G22484T +Wales/PHWC-48212D/2020|20-10-20 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_631:A1163T,T3256C,C5622T,G14202T,G19542T,C19718T,C22388T,C26060T,G29227T,C29466T,A29771G Wales/PHWC-48212D/2020|20-10-20:G22381T,C26029A +England/QEUH-9C80B0/2020|20-09-10 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_631:A1163T,T3256C,C5622T,G14202T,G19542T,C19718T,C22388T,C26060T,G29227T,C29466T,A29771G England/QEUH-9C80B0/2020|20-09-10:G22471T,T22896C +England/MILK-A06194/2020|20-10-01 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_654:C15933T,G16968T,T19839C,G28881A,G28882A,G28883C,C29784T node_655:T15933C,T16968G,T29784C node_656:C4321T,T8800C,T15801C,C17746T,C26801T,G27703T,C28320T England/MILK-A06194/2020|20-10-01:C12513T,T29059C +England/CAMC-B32AA2/2020|20-11-05 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_654:C15933T,G16968T,T19839C,G28881A,G28882A,G28883C,C29784T node_655:T15933C,T16968G,T29784C node_656:C4321T,T8800C,T15801C,C17746T,C26801T,G27703T,C28320T England/CAMC-B32AA2/2020|20-11-05:G14528A,C16393T,T16695G,C24023T +USA/AK-PHL660/2020|MW173157.1|20-06-27 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_61:C1059T node_108:C27964T node_109:C10319T,A18424G,C21304T,G25907T,C28472T,C28869T USA/AK-PHL660/2020|MW173157.1|20-06-27:A16872C +England/LOND-DC4E3/2020|20-11-04 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_217:G1659T,C3884T,C20199T,C26139T,T27634C,G28975T England/LOND-DC4E3/2020|20-11-04:A11923G,G19009T,C20233T,T21976C,C26645T +England/MILK-99D3AC/2020|20-08-31 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_217:G1659T,C3884T,C20199T,C26139T,T27634C,G28975T England/MILK-99D3AC/2020|20-08-31:G6446T,C9811T,C21234A,C22713T,C29580T +England/PHEC-1491AD/2020|20-10-17 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_238:C4543T,G9526T,C11497T,G15766T,A16889G,G17019T,G22992A,C25710T,T26876C,G28975C,G29399A England/PHEC-1491AD/2020|20-10-17:G4006T,T18877C,T25563G +England/QEUH-9B3A8D/2020|20-09-04 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_375:C10507T,C11152T,C11824T,A18840G,G23309C,G26918T,G27589A,G28436T England/QEUH-9B3A8D/2020|20-09-04:T11152C,T11824C +England/NORW-F1F9C/2020|20-10-24 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_375:C10507T,C11152T,C11824T,A18840G,G23309C,G26918T,G27589A,G28436T England/NORW-F1F9C/2020|20-10-24:C203T,C5183T,A8031G,C9207T,C25521T,G26690T +England/PHEC-14E15D/2020|20-12-09 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_380:A1866G,A6889C,C12923T,C18029T,C19269T,A27137G England/PHEC-14E15D/2020|20-12-09:C20178T +England/PHEC-149635/2020|20-10-28 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_380:A1866G,A6889C,C12923T,C18029T,C19269T,A27137G +England/ALDP-A95DE1/2020|20-10-20 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_382:A408G node_383:C22088T,C29686T England/ALDP-A95DE1/2020|20-10-20:G21193T,G24794T,G25135T,G26801C,T26843C +England/ALDP-9E75E9/2020|20-09-25 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_382:A408G node_383:C22088T,C29686T England/ALDP-9E75E9/2020|20-09-25:G2764T +England/MILK-AC7B0A/2020|20-10-21 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_382:A408G node_384:G27877T England/MILK-AC7B0A/2020|20-10-21:C7528T,G24098T,C28315T,G28939T +England/NOTT-11336A/2020|20-09-16 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_382:A408G node_384:G27877T England/NOTT-11336A/2020|20-09-16:G713A,A21127G,T26163C +England/MILK-A799FE/2020|20-10-15 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_386:G23311C node_387:T29185A England/MILK-A799FE/2020|20-10-15:A2658G,C17004T,C17125T +England/CAMC-A417F5/2020|20-10-06 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_386:G23311C node_387:T29185A England/CAMC-A417F5/2020|20-10-06:T23062C,G27459T,G29755T +England/QEUH-AE2A48/2020|20-10-26 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_386:G23311C node_388:C10626T England/QEUH-AE2A48/2020|20-10-26:C6114A,T17208C +England/ALDP-A68CF9/2020|20-10-12 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_386:G23311C node_388:C10626T England/ALDP-A68CF9/2020|20-10-12:G6476T +England/CAMB-1B6439/2020|20-09-22 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_386:G23311C node_389:G25440T,C27752T England/CAMB-1B6439/2020|20-09-22:A10323G,C28310A +England/MILK-9F1898/2020|20-09-25 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_386:G23311C node_389:G25440T,C27752T England/MILK-9F1898/2020|20-09-25:C5239T +England/MILK-A7CDC2/2020|20-10-13 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_390:G22346T node_391:G28321A England/MILK-A7CDC2/2020|20-10-13:G10996T,G24867T +England/CAMC-A5845E/2020|20-10-08 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_390:G22346T node_391:G28321A England/CAMC-A5845E/2020|20-10-08:C13009T,G17721T,G18462T,C21234T,G23675C +England/ALDP-AA10DA/2020|20-10-22 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_390:G22346T node_392:G21800T,A22053C England/ALDP-AA10DA/2020|20-10-22:T7549C,C9073T,G10870T +Wales/PHWC-4815AA/2020|20-10-13 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_390:G22346T node_392:G21800T,A22053C Wales/PHWC-4815AA/2020|20-10-13:C12049T +England/QEUH-962E81/2020|20-08-10 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_521:C313T node_528:G10886A,G17278T,C18032T,G18105T,G18662C,C23625T,A25910G England/QEUH-962E81/2020|20-08-10:G24755T,A27973G +England/QEUH-96E605/2020|20-08-17 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_521:C313T node_528:G10886A,G17278T,C18032T,G18105T,G18662C,C23625T,A25910G England/QEUH-96E605/2020|20-08-17:C2841T +Japan/TKYE622411_2020/2020|LC593808.1|20-07 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_521:C313T node_536:C8917T,C18167T,G21518T,G28975T Japan/TKYE622411_2020/2020|LC593808.1|20-07:G29773T +England/CAMC-B36516/2020|20-11-05 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_618:C913T,C3267T,C5388A,C5986T,T6954C,C14676T,C15279T,T16176C,A23063T,C23271A,C23604A,C23709T,T24506G,G24914C,C27972T,G28048T,A28111G,G28280C,A28281T,T28282A,C28977T node_619:G174T,G210T,C2453T England/CAMC-B36516/2020|20-11-05:C2918T +England/CAMC-B362D3/2020|20-11-05 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_618:C913T,C3267T,C5388A,C5986T,T6954C,C14676T,C15279T,T16176C,A23063T,C23271A,C23604A,C23709T,T24506G,G24914C,C27972T,G28048T,A28111G,G28280C,A28281T,T28282A,C28977T node_619:G174T,G210T,C2453T England/CAMC-B362D3/2020|20-11-05:C29311T +England/MILK-B3A284/2020|20-11-01 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_618:C913T,C3267T,C5388A,C5986T,T6954C,C14676T,C15279T,T16176C,A23063T,C23271A,C23604A,C23709T,T24506G,G24914C,C27972T,G28048T,A28111G,G28280C,A28281T,T28282A,C28977T node_620:T8603C,A17615G,G25437T England/MILK-B3A284/2020|20-11-01:C27046T +England/CAMC-B365AD/2020|20-11-05 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_618:C913T,C3267T,C5388A,C5986T,T6954C,C14676T,C15279T,T16176C,A23063T,C23271A,C23604A,C23709T,T24506G,G24914C,C27972T,G28048T,A28111G,G28280C,A28281T,T28282A,C28977T node_620:T8603C,A17615G,G25437T England/CAMC-B365AD/2020|20-11-05:T19232C +covid_hub_pl_ibch_0157|LR991987.1|20-05-19 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_625:C19488T node_626:G5572A,A6366T,G11410A,G25776T covid_hub_pl_ibch_0157|LR991987.1|20-05-19:A4228G,A11410G,G23403A +Poland/1/2020|LR899030.1|20-05-20 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_625:C19488T node_626:G5572A,A6366T,G11410A,G25776T Poland/1/2020|LR899030.1|20-05-20:T241C,T9440G,G17964T,T19488C,G29747T +England/MILK-6166F0/2020|20-07-05 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_61:C1059T node_86:C11916T node_91:C18998T,G29540A node_99:C66A,C4455T,C7768T,A8773G,C17304T,T24805C,C26270T England/MILK-6166F0/2020|20-07-05:T22912G +England/ALDP-9BCA93/2020|20-09-09 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_61:C1059T node_86:C11916T node_91:C18998T,G29540A node_99:C66A,C4455T,C7768T,A8773G,C17304T,T24805C,C26270T England/ALDP-9BCA93/2020|20-09-09:C782T,G1210T,C28045T +USA/WI-UW-1194/2020|MT981478.1|20-08-11 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_61:C1059T node_108:C27964T node_109:C10319T,A18424G,C21304T,G25907T,C28472T,C28869T node_110:G9928T USA/WI-UW-1194/2020|MT981478.1|20-08-11:C10377T +USA/CA-CZB-3284/2020|MW134086.1|20-07-17 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_61:C1059T node_108:C27964T node_109:C10319T,A18424G,C21304T,G25907T,C28472T,C28869T node_110:G9928T USA/CA-CZB-3284/2020|MW134086.1|20-07-17:A16148G,C16928T,G29422T +USA/CA-QDX-2817/2020|MW460624.1|20-12-26 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_61:C1059T node_133:C28887T node_135:G17014T,G21600T,G22018T,T22917G,C26681T,A28272T,C29362T node_136:G9738C,G13713A,C16394T USA/CA-QDX-2817/2020|MW460624.1|20-12-26:A9492C,C21638T,C25919T +USA/CA-QDX-2803/2020|MW460610.1|20-12-26 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_61:C1059T node_133:C28887T node_135:G17014T,G21600T,G22018T,T22917G,C26681T,A28272T,C29362T node_136:G9738C,G13713A,C16394T USA/CA-QDX-2803/2020|MW460610.1|20-12-26:C11345T,C13860T +England/SHEF-CDD62/2020|20-05-27 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_214:G24197T node_216:T241C,A8821G,C15752T,T26066C England/SHEF-CDD62/2020|20-05-27:C25665T,T28098C,G29254T +England/SHEF-10B22B9/2020|20-04-20 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_214:G24197T node_216:T241C,A8821G,C15752T,T26066C England/SHEF-10B22B9/2020|20-04-20:G3482A +England/QEUH-9B703C/2020|20-09-09 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_223:C22444T,C28854T node_232:C6312T,C12513T,G14122T,A20559G,C23127T,T26876C,C28311T,A28900C England/QEUH-9B703C/2020|20-09-09:C25466A,C25614T,A29101G +England/MILK-970CE0/2020|20-08-18 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_223:C22444T,C28854T node_232:C6312T,C12513T,G14122T,A20559G,C23127T,T26876C,C28311T,A28900C England/MILK-970CE0/2020|20-08-18:G26389T +England/SHEF-10C9BD2/2020|20-12-20 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_223:C22444T,C28854T node_235:A749G,C2113T,C6268A,C6701T,C7318T,C9438T,C14724T,A17637G,C20555T,C21660A,G22201T,C22480A,G23522C,A25856C England/SHEF-10C9BD2/2020|20-12-20:C15081T,A19963G +England/SHEF-10CC3AA/2020|20-12-17 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_223:C22444T,C28854T node_235:A749G,C2113T,C6268A,C6701T,C7318T,C9438T,C14724T,A17637G,C20555T,C21660A,G22201T,C22480A,G23522C,A25856C England/SHEF-10CC3AA/2020|20-12-17:C1420T +England/MILK-A1BC04/2020|20-10-03 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_238:C4543T,G9526T,C11497T,G15766T,A16889G,G17019T,G22992A,C25710T,T26876C,G28975C,G29399A node_239:G13993T England/MILK-A1BC04/2020|20-10-03:G204T,T961C,G6288T,T9651G,T13880C,C16163T,A22992G,C27263T,C28975G,A29399G +England/ALDP-9BE8B5/2020|20-09-09 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_367:G204T node_368:T16242A England/ALDP-9BE8B5/2020|20-09-09:G28745A +Scotland/EDB10724/2020|20-12-04 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_367:G204T node_368:T16242A Scotland/EDB10724/2020|20-12-04:C2509T,C10615T,T12134C,C21365T,C22987T +Scotland/CVR4309/2020|20-09-14 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_367:G204T node_369:C21614T Scotland/CVR4309/2020|20-09-14:C7471T +England/QEUH-AE4EA4/2020|20-10-27 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_376:A1987G node_377:T14721C,T25519G England/QEUH-AE4EA4/2020|20-10-27:C26894T,T28277C,A28612G +England/ALDP-9BECB9/2020|20-09-10 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_376:A1987G node_377:T14721C,T25519G England/ALDP-9BECB9/2020|20-09-10:C23029T +Wales/PHWC-16E6A3/2020|20-10-02 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_376:A1987G node_378:G6344T Wales/PHWC-16E6A3/2020|20-10-02:C3768T,C5031T,C18555T,T20976C +England/MILK-9A9D09/2020|20-09-01 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_376:A1987G node_378:G6344T England/MILK-9A9D09/2020|20-09-01:A1230G +England/QEUH-B6C0E9/2020|20-11-11 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_376:A1987G node_379:C66T,G10870T,A11781G,C25614T England/QEUH-B6C0E9/2020|20-11-11:C5730T,C14318T,C23644T,C29739T +England/CAMC-AEA62E/2020|20-10-25 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_376:A1987G node_379:C66T,G10870T,A11781G,C25614T England/CAMC-AEA62E/2020|20-10-25:C18329T +England/MILK-11A5634/2021|21-01-29 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_429:T19839C node_437:C14340T,G17551A,C18877T,A19167G,C19274A,G22017T,G23012A,G23868T,T26604C,C27213T,C28833T,G29527T node_438:T25713C England/MILK-11A5634/2021|21-01-29:C683T,C11747T,G22022A,T24991A,T25039C +GHA/nmimr-SARS-CoV-2-TRA-182/2021|MW598412.1|21-01-12 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_429:T19839C node_437:C14340T,G17551A,C18877T,A19167G,C19274A,G22017T,G23012A,G23868T,T26604C,C27213T,C28833T,G29527T node_438:T25713C GHA/nmimr-SARS-CoV-2-TRA-182/2021|MW598412.1|21-01-12:C5796T,C9360T +USA/MA-Broad_CRSP-00367/2021|MW599505.1|21-01-08 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_429:T19839C node_442:C3411T,A12519G,C21757T,G23593C,A23756T,G29751T node_443:G3871T,C4999T,A5040G,G14371T,C15240T,G23012A,A25048G,G25166C USA/MA-Broad_CRSP-00367/2021|MW599505.1|21-01-08:C22264T +USA/MA-MGH-03951/2021|MW617773.1|21-01-22 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_429:T19839C node_442:C3411T,A12519G,C21757T,G23593C,A23756T,G29751T node_443:G3871T,C4999T,A5040G,G14371T,C15240T,G23012A,A25048G,G25166C USA/MA-MGH-03951/2021|MW617773.1|21-01-22:T27824C +USA/CO-CDC-STM-000008403/2021|MW617544.1|21-01-31 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_499:G10097A,C23731T node_500:C4002T,C13536T node_506:G3302A,C9693T,C11758T,C12789T,T22917G,G29422T USA/CO-CDC-STM-000008403/2021|MW617544.1|21-01-31:A235C,T1921C,C22522T,C29259T +England/LOND-12F65DC/2021|21-01-19 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_499:G10097A,C23731T node_500:C4002T,C13536T node_506:G3302A,C9693T,C11758T,C12789T,T22917G,G29422T England/LOND-12F65DC/2021|21-01-19:G8591T,G15906T,A18594G,G23868T,G25906T,C26060T,G28079A,T28124C,T28723C,G29260T,G29543T +Switzerland/310500/2020|LR898805.1|20-10-08 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_499:G10097A,C23731T node_500:C4002T,C13536T node_507:G2995T,T4871C,C6449T,C10252T,C19366T,T27808C Switzerland/310500/2020|LR898805.1|20-10-08:C9286T,G18210T,C21306T,G28541T +Switzerland/300433/2020|LR898634.1|20-09-29 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_499:G10097A,C23731T node_500:C4002T,C13536T node_507:G2995T,T4871C,C6449T,C10252T,C19366T,T27808C Switzerland/300433/2020|LR898634.1|20-09-29:G27382T +England/MILK-9A699F/2020|20-09-01 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_512:C3373A,C15960T node_513:T15960C node_515:G1820A,C6883T,G21724A,G28003C England/MILK-9A699F/2020|20-09-01:C1457T,G3286A,C8290T,C8626T,C9298T,C24378T,G26648A,C28657T +England/CAMC-947392/2020|20-07-18 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_571:T29464C node_572:G26918T node_573:C7843T,G15438T,C25207T,C28453T England/CAMC-947392/2020|20-07-18:T25949C +England/MILK-977469/2020|20-07-24 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_571:T29464C node_572:G26918T node_573:C7843T,G15438T,C25207T,C28453T England/MILK-977469/2020|20-07-24:C2536T,T7843C,C8318A,T26160C +USA/CA-LACPHL-AF00169/2021|MW485829.1|21-01-08 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_61:C1059T node_133:C28887T node_135:G17014T,G21600T,G22018T,T22917G,C26681T,A28272T,C29362T node_137:C2395T,T2597C,A12878G,T24349C,G27890T node_138:C8947T,C12100T USA/CA-LACPHL-AF00169/2021|MW485829.1|21-01-08:C1380T,C6539T,T7813C,A10417G,A19476G,C21638T,G22708T,G28628T,T29362C +USA/CA-LACPHL-AF00029/2020|MW424876.1|20-12-20 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_61:C1059T node_133:C28887T node_135:G17014T,G21600T,G22018T,T22917G,C26681T,A28272T,C29362T node_137:C2395T,T2597C,A12878G,T24349C,G27890T node_138:C8947T,C12100T USA/CA-LACPHL-AF00029/2020|MW424876.1|20-12-20:C1601T,C4918T +England/CAMC-A65DDB/2020|20-10-11 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_223:C22444T,C28854T node_224:T1947C node_225:G2659T,G5008T,G19549T,G22918T,C25349A,G25947C,G26062T England/CAMC-A65DDB/2020|20-10-11:T22918G +England/CAMC-AAF5A0/2020|20-10-22 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_223:C22444T,C28854T node_224:T1947C node_225:G2659T,G5008T,G19549T,G22918T,C25349A,G25947C,G26062T England/CAMC-AAF5A0/2020|20-10-22:C4672T,C8605T,C11003T +England/MILK-ABBF2B/2020|20-10-22 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_223:C22444T,C28854T node_224:T1947C node_227:C7528T,C29555T England/MILK-ABBF2B/2020|20-10-22:C10474T,C13536T +England/QEUH-96A85E/2020|20-08-14 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_223:C22444T,C28854T node_224:T1947C node_227:C7528T,C29555T England/QEUH-96A85E/2020|20-08-14:T23986C +HongKong/Homo-sapiens/HKG/Case5132/2020|MW181761.1|20-10-06 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_223:C22444T,C28854T node_224:T1947C node_228:G922A,G3431T,T5653C,G5950A,C7504T,T24175C,C26060T HongKong/Homo-sapiens/HKG/Case5132/2020|MW181761.1|20-10-06:C14724T +HongKong/Homo-sapiens/HKG/Case5126/2020|MW181753.1|20-10-06 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_223:C22444T,C28854T node_224:T1947C node_228:G922A,G3431T,T5653C,G5950A,C7504T,T24175C,C26060T HongKong/Homo-sapiens/HKG/Case5126/2020|MW181753.1|20-10-06:A6391G +England/PHEC-149F0D/2020|20-11-19 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_223:C22444T,C28854T node_229:C2836T,G21724T node_230:C1122T,T2836C,T4057C,G6077T,A10323G,G13858T,C27092T,C27434T,G28975T +England/MILK-BE717A/2020|20-11-29 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_223:C22444T,C28854T node_229:C2836T,G21724T node_230:C1122T,T2836C,T4057C,G6077T,A10323G,G13858T,C27092T,C27434T,G28975T England/MILK-BE717A/2020|20-11-29:C11003T,C26404T,G26754A +CAN/COVID_CRCHUM_Pre_Freeze_6/2020|MW309430.1|20-09-04 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_223:C22444T,C28854T node_229:C2836T,G21724T node_231:G61T,C913T,C1541T,C11259T,C25000T,G26144A,G26849T,C29358T CAN/COVID_CRCHUM_Pre_Freeze_6/2020|MW309430.1|20-09-04:C9745T,C10440T +Scotland/QEUH-BEAF22/2020|20-12-04 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_223:C22444T,C28854T node_229:C2836T,G21724T node_231:G61T,C913T,C1541T,C11259T,C25000T,G26144A,G26849T,C29358T Scotland/QEUH-BEAF22/2020|20-12-04:G4105T,C4754T,C5730T,C21597T,T21841A +England/MILK-A230C1/2020|20-10-03 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_238:C4543T,G9526T,C11497T,G15766T,A16889G,G17019T,G22992A,C25710T,T26876C,G28975C,G29399A node_239:G13993T node_240:G5629T England/MILK-A230C1/2020|20-10-03:A2175G +Northern_Ireland/QEUH-969C53/2020|20-08-14 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_335:G1464A,A10978T,T20799C node_336:G5572T,G28375T Northern_Ireland/QEUH-969C53/2020|20-08-14:C19545T,C26408T +England/ALDP-9E79B0/2020|20-09-24 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_335:G1464A,A10978T,T20799C node_338:G18803T England/ALDP-9E79B0/2020|20-09-24:C5817T,T10321C,A10724G,C16469T,C21635T,G25320T +England/MILK-B561FE/2020|20-11-06 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_335:G1464A,A10978T,T20799C node_338:G18803T England/MILK-B561FE/2020|20-11-06:C1288T,T16213C,A23631G,C26681T,G27882T +England/CAMC-9DFBC4/2020|20-09-21 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_367:G204T node_369:C21614T node_370:C6317T England/CAMC-9DFBC4/2020|20-09-21:G9658T,T21841C +England/QEUH-AD1165/2020|20-10-25 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_367:G204T node_369:C21614T node_370:C6317T England/QEUH-AD1165/2020|20-10-25:C4795T,T5471C,A21631T +England/ALDP-FB5E3E/2021|21-01-11 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_367:G204T node_369:C21614T node_371:G17944T,C24334T,T24814C,C27769T England/ALDP-FB5E3E/2021|21-01-11:G1141A,T11522G,A13315G,C18744T,T21973C +England/ALDP-E8756E/2021|21-01-04 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_367:G204T node_369:C21614T node_371:G17944T,C24334T,T24814C,C27769T England/ALDP-E8756E/2021|21-01-04:C12781T,G17632A,C28453T +England/ALDP-A2EAE6/2020|20-10-05 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_367:G204T node_369:C21614T node_372:T24769C,C25460T England/ALDP-A2EAE6/2020|20-10-05:C337T,T21294A,G21295A,G21296A,A25008G +Scotland/QEUH-A636C3/2020|20-10-10 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_367:G204T node_369:C21614T node_372:T24769C,C25460T Scotland/QEUH-A636C3/2020|20-10-10:C593T,T26903C,C26936T +England/QEUH-A76C07/2020|20-10-12 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_367:G204T node_369:C21614T node_373:C15480T England/QEUH-A76C07/2020|20-10-12:G21777A +England/MILK-AC7997/2020|20-10-21 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_367:G204T node_369:C21614T node_373:C15480T England/MILK-AC7997/2020|20-10-21:C125T +Scotland/QEUH-9DC927/2020|20-09-22 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_367:G204T node_369:C21614T node_374:G8179T Scotland/QEUH-9DC927/2020|20-09-22:C4794T,T8179G,G23006A +Scotland/QEUH-9B75D3/2020|20-09-04 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_360:T445C,C6286T,G21255C,C22227T,C28932T,G29645T node_361:C26801G node_366:C27944T node_367:G204T node_369:C21614T node_374:G8179T Scotland/QEUH-9B75D3/2020|20-09-04:G29778T +England/CAMC-AEACFF/2020|20-10-25 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_512:C3373A,C15960T node_513:T15960C node_515:G1820A,C6883T,G21724A,G28003C node_516:C12249T England/CAMC-AEACFF/2020|20-10-25:C3141T,C4683T,C8683T,C17690T,T19935C,C24130T,A27979G +England/MILK-97356A/2020|20-08-14 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_238:C4543T,G9526T,C11497T,G15766T,A16889G,G17019T,G22992A,C25710T,T26876C,G28975C,G29399A node_239:G13993T node_240:G5629T England/MILK-97356A/2020|20-08-14:C15720T +England/MILK-9A9F7C/2020|20-08-31 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_319:C27800A node_320:C7844T,T24925C,C27920T node_321:C4893T,C29762T England/MILK-9A9F7C/2020|20-08-31:G19879A,C25433T +England/OXON-F42364/2020|20-12-18 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_319:C27800A node_320:C7844T,T24925C,C27920T node_321:C4893T,C29762T England/OXON-F42364/2020|20-12-18:G1306T,G4510T,T8662C,C8733T,C18032T +England/MILK-9C2766/2020|20-09-10 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_335:G1464A,A10978T,T20799C node_336:G5572T,G28375T node_337:G2072A,C27294T England/MILK-9C2766/2020|20-09-10:T22189C,G27382C,A27383T,T27384C +England/ALDP-A95A9F/2020|20-10-19 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_335:G1464A,A10978T,T20799C node_336:G5572T,G28375T node_337:G2072A,C27294T England/ALDP-A95A9F/2020|20-10-19:T14499C,C17118T,C23854T,A27865T,T27866A +England/PHEC-149FA3/2020|20-11-20 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_512:C3373A,C15960T node_513:T15960C node_515:G1820A,C6883T,G21724A,G28003C node_516:C12249T node_517:G3431T,T25577C,C25626T,C27002T England/PHEC-149FA3/2020|20-11-20:G3433A,G8084A,C11941T,C18555T,A26174C +England/QEUH-C9332B/2020|20-12-17 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_426:G28882A,G28883C node_427:G28881A node_512:C3373A,C15960T node_513:T15960C node_515:G1820A,C6883T,G21724A,G28003C node_516:C12249T node_517:G3431T,T25577C,C25626T,C27002T England/QEUH-C9332B/2020|20-12-17:G9314A,C13605T,G14490A +England/CAMC-A649C9/2020|20-10-10 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_238:C4543T,G9526T,C11497T,G15766T,A16889G,G17019T,G22992A,C25710T,T26876C,G28975C,G29399A node_239:G13993T node_240:G5629T node_242:C556T,C23525T England/CAMC-A649C9/2020|20-10-10:C6813T,C13620T +England/MILK-B04890/2020|20-10-24 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_53:G25563T node_211:C18877T node_212:C26735T node_238:C4543T,G9526T,C11497T,G15766T,A16889G,G17019T,G22992A,C25710T,T26876C,G28975C,G29399A node_239:G13993T node_240:G5629T node_242:C556T,C23525T England/MILK-B04890/2020|20-10-24:G8371A,C23679T +England/CAMC-A57F03/2020|20-10-09 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_319:C27800A node_322:G12988T,G15598A,G18028T,T24910C,T26972C node_323:G25494T node_324:C25386T England/CAMC-A57F03/2020|20-10-09:T505C,A2419G,G17058T +England/MILK-A7D15C/2020|20-10-13 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_319:C27800A node_322:G12988T,G15598A,G18028T,T24910C,T26972C node_323:G25494T node_324:C25386T England/MILK-A7D15C/2020|20-10-13:C21302T,C21304A,C26256T,C27119T,C28453T +Wales/PHWC-47F3A5/2020|20-10-07 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_319:C27800A node_322:G12988T,G15598A,G18028T,T24910C,T26972C node_323:G25494T node_325:G28817T Wales/PHWC-47F3A5/2020|20-10-07:T9655C,G28198T +England/ALDP-A85BCC/2020|20-10-17 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_319:C27800A node_322:G12988T,G15598A,G18028T,T24910C,T26972C node_323:G25494T node_325:G28817T England/ALDP-A85BCC/2020|20-10-17:T209C,T11857C +England/ALDP-A2FCA3/2020|20-10-05 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_319:C27800A node_322:G12988T,G15598A,G18028T,T24910C,T26972C node_326:C20451T,G21770A node_327:T7919G England/ALDP-A2FCA3/2020|20-10-05:C24734T +Scotland/MILK-A69E6B/2020|20-10-09 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_319:C27800A node_322:G12988T,G15598A,G18028T,T24910C,T26972C node_326:C20451T,G21770A node_327:T7919G Scotland/MILK-A69E6B/2020|20-10-09:A28483G,A28877G +England/MILK-A7D1A7/2020|20-10-13 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_319:C27800A node_322:G12988T,G15598A,G18028T,T24910C,T26972C node_326:C20451T,G21770A node_328:G18583A England/MILK-A7D1A7/2020|20-10-13:T4579A,T27835C +England/MILK-A91486/2020|20-10-16 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_319:C27800A node_322:G12988T,G15598A,G18028T,T24910C,T26972C node_326:C20451T,G21770A node_328:G18583A England/MILK-A91486/2020|20-10-16:G2272T,G20679T,G24586T +AUT/2021006354/2021|MW672357.1|21-02 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_319:C27800A node_322:G12988T,G15598A,G18028T,T24910C,T26972C node_329:C16394T,C22127T,G23876A,G25947T node_333:C829T,C14697T,C18176T,G19398T,G28083T,G28975T AUT/2021006354/2021|MW672357.1|21-02:C878T,C12374T,C20384T,C21639T,C29367T +England/MILK-E7F4C6/2021|21-01-02 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_319:C27800A node_322:G12988T,G15598A,G18028T,T24910C,T26972C node_329:C16394T,C22127T,G23876A,G25947T node_333:C829T,C14697T,C18176T,G19398T,G28083T,G28975T England/MILK-E7F4C6/2021|21-01-02:T9070C,C10296T +England/ALDP-AA169C/2020|20-10-22 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_319:C27800A node_322:G12988T,G15598A,G18028T,T24910C,T26972C node_329:C16394T,C22127T,G23876A,G25947T node_330:C29274T node_331:G25218T England/ALDP-AA169C/2020|20-10-22:C23191T,G23909A +England/MILK-A474DA/2020|20-10-06 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_319:C27800A node_322:G12988T,G15598A,G18028T,T24910C,T26972C node_329:C16394T,C22127T,G23876A,G25947T node_330:C29274T node_331:G25218T England/MILK-A474DA/2020|20-10-06:A6659G +England/ALDP-B483EA/2020|20-11-07 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_319:C27800A node_322:G12988T,G15598A,G18028T,T24910C,T26972C node_329:C16394T,C22127T,G23876A,G25947T node_330:C29274T node_332:T8110C England/ALDP-B483EA/2020|20-11-07:C10039A,T18402C,C29738T +England/QEUH-AA0035/2020|20-10-20 node_25:C241T node_26:C14408T node_27:A23403G node_28:C3037T node_275:A20268G node_316:G29734C node_317:C17104T node_318:T7767C,C8047T,C22879A node_319:C27800A node_322:G12988T,G15598A,G18028T,T24910C,T26972C node_329:C16394T,C22127T,G23876A,G25947T node_330:C29274T node_332:T8110C England/QEUH-AA0035/2020|20-10-20:G11417T