Mercurial > repos > iuc > usher_matutils
diff test-data/test_23_equally_parsimoniou.tabular @ 0:79e2ee4e6ebb draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/usher commit c1531745ea5f5c4fbd22ad18e290b47fdcb01bb1"
author | iuc |
---|---|
date | Tue, 11 May 2021 17:54:51 +0000 |
parents | |
children |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test_23_equally_parsimoniou.tabular Tue May 11 17:54:51 2021 +0000 @@ -0,0 +1,1097 @@ +sample epps +England/BRIS-1853249/2020|20-04-02 4 +Wales/PHWC-25B04/2020|20-03-24 4 +NPL/61-TW/2020|MT072688.1|20-01-13 1 +Wales/LIVE-A6831/2020|20-03-16 4 +Scotland/EDB1317/2020|20-04-09 3 +Scotland/EDB354/2020|20-03-30 4 +England/SHEF-BFF8B/2020|20-03-25 1 +England/LCST-24D7202/2020|20-06-22 1 +England/SHEF-BFFC7/2020|20-03-25 4 +England/PHEC-1E01E/2020|20-04-03 4 +DP0476/2020|LC571003.1|20-02-16 1 +DP0191/2020|LC570980.1|20-02-15 1 +England/LIVE-A5D06/2020|20-03-17 4 +England/LIVE-A065B/2020|20-05-27 4 +USA/CA-CZB-1091/2020|MT460091.1|20-05-01 4 +USA/CA-CZB-11876/2020|MW276506.1|20-04-08 4 +USA/CDC-CruiseA-18/2020|MT159716.2|20-02-24 4 +NED/NB02_13KS/2020|MT457397.1|20-04-29 4 +USA/CA-QDX-1986/2020|MW190732.1|20-03-18 1 +USA/CA-CZB-1250/2020|MT534320.1|20-04-12 4 +USA/CA-CZB-1015/2020|MT438733.1|20-04-22 1 +USA/CA-CZB-1073/2020|MT449664.1|20-04-21 1 +England/BRIS-1258A2/2020|20-03-29 1 +England/SHEF-BFEBB/2020|20-03-24 1 +USA/CA-CZB-1041/2020|MT438759.1|20-04-22 1 +USA/CA-CZB-1051/2020|MT449644.1|20-04-06 1 +England/LIVE-9E66F/2020|20-04-10 4 +Scotland/CVR705/2020|20-03-26 4 +England/SHEF-BFF21/2020|20-03-25 1 +England/LIVE-A4C46/2020|20-03-12 1 +Switzerland/100159/2020|LR884273.1|20-03-16 1 +England/EXET-135818/2020|20-04-11 6 +France/40002VJ/2020|MT470179.1|20-03 7 +Wales/PHWC-310CA/2020|20-04-11 2 +Scotland/GCVR-171160/2020|20-03-26 4 +England/BRIS-130E2A/2020|20-03-24 4 +USA/WI-UW-298/2020|MT706406.1|20-04-13 1 +USA/WI-UW-314/2020|MT706422.1|20-04-16 1 +USA/WI-UW-325/2020|MT706432.1|20-04-24 2 +USA/WI-UW-290/2020|MT706398.1|20-04-08 1 +Scotland/CVR3488/2020|20-05-12 1 +Scotland/CVR780/2020|20-03-27 1 +Scotland/EDB5629/2020|20-03-24 1 +HKG/HKU-904a/2020|MT365032.1|20-01-30 2 +Scotland/EDB5040/2020|20-04-02 1 +England/LOND-126031F/2020|20-03-15 1 +Scotland/EDB046/2020|20-03-15 5 +England/BRIS-12EEB6/2020|20-04-22 1 +Scotland/EDB199/2020|20-03-26 1 +England/CAMB-74A09/2020|20-03-18 1 +England/ALDP-9EE3AC/2020|20-05-06 1 +USA/WA3-UW1/2020|MT163716.1|20-02-27 1 +SouthKorea/KOR-BA-ACH_2719/2020|MT304476.1|20-02-29 1 +England/ALDP-52C0FA/2020|20-06-01 1 +England/LIVE-9D7D6/2020|20-04-15 1 +Japan/TKYE63557_2020/2020|LC581365.1|20-03 1 +Japan/TKYE64688_2020/2020|LC581375.1|20-03 1 +USA/CA-QDX-33/2020|MT614459.1|20-03-15 1 +USA/DC-HP00063/2020|MT646075.1|20-03-13 1 +England/PHEC-1A601/2020|20-03-04 1 +England/PHEC-2275E/2020|20-06-22 1 +USA/NY-QDX-1999/2020|MW190795.1|20-03-16 1 +USA/NY-QDX-1969/2020|MW190709.1|20-03-15 1 +Wales/PHWC-285F4/2020|20-04-01 2 +England/BRIS-130965/2020|20-04-13 2 +Scotland/CVR44/2020|20-03-13 1 +Scotland/CVR839/2020|20-03-27 1 +Scotland/GCVR-170107/2020|20-03-23 1 +Scotland/CVR207/2020|20-03-18 1 +England/CAMB-8042A/2020|20-04-10 1 +England/CAMB-737B8/2020|20-03-30 6 +USA/WA-S885/2020|MT642386.1|20-04-22 1 +USA/UT-QDX-1870/2020|MW190618.1|20-03-16 1 +England/BRIS-1265AA/2020|20-04-10 1 +AUS/NT38/2020|MT641726.1|20 1 +England/BRIS-123965/2020|20-04-07 1 +IND/Isolate_9088/2020|MW555597.1|20-06-30 1 +England/BRIS-125347/2020|20-03-27 1 +IND/763/2020|MT577009.1|20 1 +England/CAMB-7772D/2020|20-03-31 4 +England/BRIS-12208F/2020|20-03-21 4 +Scotland/EDB1824/2020|20-04-16 1 +Spain/H12_46/2020|LR884009.1|20-04-08 2 +USA/MN-MDH-1475/2020|MT920008.1|20-03-23 2 +USA/CA-CZB-1615/2020|MT628267.1|20-04-14 2 +USA/FL-BPHL-0393/2020|MT757005.1|20-03-17 1 +Spain/R10_33/2020|LR884127.1|20-03-02 1 +AUS/VIC1255/2020|MT451830.1|20-04-11 1 +AUS/VIC1878/2020|MT745600.1|20-03-29 1 +England/NORT-284A9B/2020|20-03-25 1 +Scotland/CVR10/2020|20-03-10 1 +England/CAMB-75BD8/2020|20-03-29 1 +UnitedKingdom/NORW-EB4F0/2020|LR822001.1|20-05-01 1 +USA/WI-UW-26/2020|MT706147.1|20-03-24 1 +USA/IL-QDX-2568/2020|MW191367.1|20-03-14 1 +USA/ID-QDX-1727/2020|MW190466.1|20-03-17 1 +USA/UT-UPHL-201111720/2020|MW265609.1|20-04-30 1 +USA/IN-QDX-184/2020|MT786818.1|20-04-28 1 +USA/WI-UW-558/2020|MT750137.1|20-06-25 1 +AUS/VIC2260/2020|MT972173.1|20-06-22 1 +England/EXET-1358BE/2020|20-04-15 1 +USA/FL-BPHL-0553/2020|MT834693.1|20-06-30 2 +EGY/CUNCI-HGC5I033/2020|MT614347.1|20-06-02 3 +USA/RI-CDC-0556/2020|MT304488.1|20-03-01 2 +Switzerland/100198/2020|LR884312.1|20-03-17 1 +England/NOTT-10E1B3/2020|20-03-19 5 +USA/WI-UW-37/2020|MT706158.1|20-03-22 2 +Scotland/CVR2927/2020|20-04-22 1 +Scotland/GCVR-173C30/2020|20-04-07 1 +USA/CA-CZB-2091/2020|MT750490.1|20-05-07 2 +Switzerland/140091/2020|LR824563.1|20-04-18 1 +England/BRIS-12755E/2020|20-04-22 2 +England/BRIS-12468B/2020|20-04-09 2 +England/NORW-E9DF7/2020|20-05-02 1 +Scotland/EDB156/2020|20-03-23 1 +Wales/PHWC-27B20/2020|20-03-30 1 +Wales/PHWC-2624A/2020|20-03-27 1 +Wales/PHWC-2BF8A/2020|20-04-02 1 +Wales/PHWC-29E43/2020|20-04-04 1 +England/LOND-D3534/2020|20-03-27 1 +England/PHEC-20C24/2020|20-04-21 1 +England/CAMB-7D2EA/2020|20-04-06 1 +England/LIVE-A63E5/2020|20-03-18 1 +Wales/PHWC-260C8/2020|20-03-26 1 +England/BRIS-12F969/2020|20-03-30 1 +England/PHEC-2083F/2020|20-04-13 2 +Wales/PHWC-16C6F0/2020|20-06-09 1 +Wales/PHWC-27461/2020|20-03-31 1 +Wales/PHWC-29F13/2020|20-04-01 1 +IND/GBRC99/2020|MT509504.1|20-05-06 1 +IND/GBRC31/2020|MT467247.1|20-04-29 1 +AUS/VIC1239/2020|MT451821.1|20-04-02 1 +AUS/VIC1282/2020|MW153048.1|20-04-08 1 +IND/GBRC128/2020|MT539172.1|20-05-02 1 +IND/GBRC123/2020|MT539176.1|20-05-02 1 +POL/PL_MCB_32/2020|MW273814.1|20-04-22 2 +POL/PL_MCB_75/2020|MW273857.1|20-04-16 1 +England/CAMB-7BED9/2020|20-04-04 1 +Netherlands/NA_302/2020|LR878041.1|20-04-01 1 +USA/WI-UW-1385/2020|MW035549.1|20-09-06 1 +USA/TX-DSHS-0975/2020|MW217385.1|20-06-16 1 +Northern_Ireland/NIRE-1022CB/2020|20-03-25 1 +Netherlands/NoordHolland_18/2020|LR883316.1|20-04-27 1 +Poland/covid_hub_pl_ibch_0033/2020|LR899101.1|20-05-20 2 +GRC/202_32984/2020|MT459870.1|20-03-12 1 +USA/FHCRC-19442/2020|MW593677.1|20-07-30 1 +USA/CA-LACPHL-AE00022/2020|MW389622.1|20-07-07 1 +Wales/PHWC-31CB7/2020|20-04-14 1 +Wales/PHWC-26D2B/2020|20-03-30 1 +MYS/188407/2020|MT372480.1|20-03-18 1 +AUS/VIC961/2020|MT451653.1|20-03-27 4 +Spain/R11/2020|LR884126.1|20-03-06 1 +Spain/LP19_4952/2020|LR884066.1|20-03-07 1 +USA/COVID20-0008/2020|MT764174.1|20-03-10 1 +USA/IL-CDC-IL2/2020|MT044257.1|20-01-28 1 +USA/CA-QDX-1421/2020|MW065371.1|20-03-18 1 +USA/CA-QDX-2080/2020|MW190832.1|20-03-19 1 +England/CAMB-76515/2020|20-03-29 1 +England/CAMB-1AE294/2020|20-04-27 1 +England/LEED-2A8D10/2020|20-03-31 1 +England/CAMB-1AC6F4/2020|20-04-21 2 +Scotland/EDB2049/2020|20-04-18 1 +England/CAMB-7EBDF/2020|20-04-07 1 +Scotland/CVR3417/2020|20-05-07 2 +Scotland/CVR1519/2020|20-04-03 1 +England/MILK-93B73B/2020|20-06-21 2 +England/MILK-9589F6/2020|20-06-15 2 +England/BRIS-128441/2020|20-04-16 1 +England/CAMB-7C39D/2020|20-04-13 2 +England/ALDP-50085E/2020|20-06-27 2 +England/PHEC-127E8/2020|20-03-28 1 +USA/MI-MDHHS-SC20612/2020|MT585039.1|20-04-29 1 +USA/MI-MDHHS-SC20597/2020|MT585043.1|20-04-29 1 +USA/FL-BPHL-0540/2020|MT834625.1|20-03-21 1 +CHL/Santiago-PUC_MVL_0112/2020|MW365482.1|20-04-02 3 +USA/CA-CZB-1434/2020|MT628140.1|20-03-25 1 +USA/VA-DCLS-0676/2020|MT911804.1|20-04 1 +USA/UT-UPHL-201016311/2020|MW181497.1|20-04-09 1 +USA/MI-QDX-476/2020|MW064508.1|20-03-23 1 +USA/FL-BPHL-0401/2020|MT757087.1|20-05-14 1 +USA/CA-CZB-14951/2020|MW565126.1|20-06-06 3 +USA/WI-UW-1105/2020|MT929055.1|20-07-24 1 +USA/RML-22/2020|MW221270.1|20-08-30 2 +Scotland/CVR2931/2020|20-04-22 1 +Scotland/GCVR-172150/2020|20-03-30 1 +England/BRIS-124885/2020|20-03-24 1 +England/BRIS-122C4F/2020|20-04-02 1 +USA/WI-UW-1046/2020|MT928999.1|20-07-29 1 +USA/TX-DSHS-0409/2020|MW127871.1|20-06-01 4 +Scotland/CVR3054/2020|20-04-24 3 +England/MILK-95698F/2020|20-06-06 1 +England/CAMB-79ECC/2020|20-04-01 1 +USA/AZ-CDC-STM-0000013-A12/2021|MW525113.1|21-01-09 1 +USA/AK-PHL414/2020|MT946886.1|20-06-03 1 +USA/AK-PHL689/2020|MW173160.1|20-06-29 1 +England/MILK-974596/2020|20-08-17 1 +Switzerland/310363/2020|LR898676.1|20-10-07 1 +England/MILK-978626/2020|20-07-30 2 +England/MILK-9A565D/2020|20-09-03 2 +USA/NM-QDX-264/2020|MT806796.1|20-04-30 2 +USA/CA-CZB-10902/2020|MW276406.1|20-08-19 3 +Scotland/EDB1198/2020|20-04-08 2 +England/PHEC-20A84/2020|20-04-20 2 +Scotland/EDB6324/2020|20-06-01 2 +Scotland/EDB4579/2020|20-05-06 2 +Wales/PHWC-360E3/2020|20-04-26 2 +USA/CA-QDX-2630/2020|MW191335.1|20-03-15 1 +Netherlands/NA_289/2020|LR878031.1|20-03-31 2 +France/10065EE/2020|MT470176.1|20-03 2 +France/10036BG/2020|MT470106.1|20-03 1 +IHUCOVID-0033|LR794417.1|? 1 +England/PORT-2D0D4C/2020|20-04-27 2 +Switzerland/100210/2020|LR884314.1|20-03-18 1 +POL/PL_MCB_72/2020|MW273854.1|20-05-10 2 +POL/PL_MCB_97/2020|MW273879.1|20-05-10 1 +England/QEUH-9CE80D/2020|20-09-17 1 +England/QEUH-990752/2020|20-08-29 1 +AUS/VIC38/2020|MT450953.1|20-03-11 1 +IHUCOVID-0133|LR794459.1|? 1 +USA/MN67-MDH67/2020|MT911566.1|20-03-14 1 +Netherlands/NA_292/2020|LR878032.1|20-04-01 1 +Switzerland/101166/2020|LR824397.1|20-03-31 1 +Switzerland/100154/2020|LR824311.1|20-03-16 1 +PER/covper020/2020|MW030251.1|20-07-03 1 +PER/covper091/2020|MW030227.1|20-03-17 1 +England/ALDP-49A5AE/2020|20-06-13 2 +England/ALDP-4A2A77/2020|20-05-22 1 +Wales/PHWC-16930B/2020|20-04-01 1 +Wales/PHWC-34285/2020|20-04-14 1 +USA/UT-08320/2020|MW206019.1|20-05-15 1 +USA/UT-UPHL-2009325/2020|MW206255.1|20-05-14 1 +England/QEUH-B2DD0B/2020|20-11-03 2 +England/MILK-A7B0BB/2020|20-10-14 1 +AUS/VIC989/2020|MT451674.1|20-03-31 1 +AUS/VIC1056/2020|MT451723.1|20-04-03 1 +England/BRIS-12B2BD/2020|20-05-02 1 +England/BRIS-128DCE/2020|20-04-14 1 +Scotland/GCVR-1725BE/2020|20-04-04 1 +Scotland/CVR30/2020|20-03-13 1 +England/NORT-289814/2020|20-04-01 1 +England/ALDP-9ED57A/2020|20-05-08 1 +USA/MA_MGH_00165/2020|MT520528.1|20-03-26 1 +USA/MA_MGH_00711/2020|MT520198.1|20-04-08 1 +Scotland/CVR129/2020|20-03-13 1 +Scotland/CVR52/2020|20-03-14 1 +GRC/208_33922/2020|MT459876.1|20-03-14 1 +England/CAMC-947875/2020|20-07-13 1 +GHA/34927_S20/2020|MT890226.1|20-05-23 1 +GHA/35563_S37/2020|MT890230.1|20-05-24 2 +England/CAMC-C91F38/2020|20-12-11 1 +SLE/KGH-G-8626/2020|MT872492.1|20-04-10 1 +Scotland/EDB2100/2020|20-04-19 1 +England/CAMB-1AC7D3/2020|20-04-22 1 +Scotland/CVR2381/2020|20-04-13 1 +Scotland/CVR2197/2020|20-04-11 1 +England/NORW-E8C37/2020|20-04-13 2 +England/NORW-E75A6/2020|20-05-04 1 +Wales/PHWC-3122E/2020|20-04-10 1 +Wales/PHWC-1645EC/2020|20-05-10 1 +England/ALDP-9ED9F6/2020|20-05-05 1 +England/ALDP-944BD9/2020|20-06-07 1 +England/LEED-2A91D7/2020|20-04-06 2 +England/LEED-2A87C7/2020|20-04-03 1 +USA/WA-UW-4105/2020|MT358746.1|20-03-31 1 +USA/WA-UW-2220/2020|MT345839.1|20-03-23 1 +USA/FL-BPHL-1565/2020|MW056116.1|20-09-10 1 +USA/FL-BPHL-0510/2020|MT834668.1|20-06-10 1 +USA/MI-MDHHS-SC20574/2020|MT585034.1|20-04-29 1 +USA/MI-MDHHS-SC20587/2020|MT585026.1|20-04-29 1 +USA/CA-CZB-11119/2020|MW276517.1|20-05-29 1 +USA/CA-CZB-11132/2020|MW276510.1|20-05-23 1 +Wales/PHWC-1658A6/2020|20-05-19 1 +Wales/PHWC-2E0A2/2020|20-04-10 1 +Scotland/EDB3137/2020|20-04-06 1 +Scotland/EDB2810/2020|20-03-30 1 +USA/FL-BPHL-1680/2020|MW166145.1|20-08-11 1 +USA/FL-BPHL-1350/2020|MW023549.1|20-07-15 1 +USA/CA-CZB-1517/2020|MT628191.1|20-05-13 1 +USA/CA-CZB-1793/2020|MT750334.1|20-04-16 1 +USA/WA-UW-2108/2020|MT345811.1|20-03-24 5 +USA/MN-MDH-1434/2020|MT893000.1|20-03-31 1 +USA/WI-UW-1119/2020|MT929068.1|20-07-27 1 +USA/WI-UW-1005/2020|MT846691.1|20-07-17 2 +USA/WI-UW-1092/2020|MT929042.1|20-07-27 1 +USA/TX-DSHS-1232/2020|MW309089.1|20-03-25 1 +USA/WA-QDX-235/2020|MT806806.1|20-04-27 1 +USA/WA-S1266/2020|MT821676.1|20-05-13 2 +USA/UT-QDX-2224/2020|MW191025.1|20-03-13 1 +USA/TX-DSHS-0313/2020|MW115058.1|20-06-13 1 +USA/FL-QDX-1620/2020|MW190373.1|20-03-16 1 +USA/FL-BPHL-0109/2020|MT872200.1|20-04-30 1 +USA/TX-DSHS-0780/2020|MW147526.1|20-05-21 1 +USA/MN-MDH-1557/2020|MT958254.1|20-08-03 1 +USA/MN-MDH-1596/2020|MT997714.1|20-05-12 1 +USA/CA-CZB0731/2020|MT385450.1|20-03-31 1 +USA/MA_MGH_00458/2020|MT520347.1|20-04-04 1 +USA/MA_MGH_00445/2020|MT520273.1|20-04-01 1 +USA/MN-MDH-1464/2020|MT919997.1|20-03-24 1 +USA/WA-UW-2008/2020|MT326031.1|20-03-24 1 +USA/WA-UW-6327/2020|MT412324.1|20-04-02 1 +USA/WA-UW-3832/2020|MT358685.1|20-03-26 1 +USA/MI-QDX-371/2020|MW064412.1|20-03-23 1 +USA/MI-QDX-298/2020|MW064340.1|20-03-21 1 +USA/DC-HP00089/2020|MT509482.1|20-03-31 1 +USA/UT-03817/2020|MT873871.1|20-04-03 1 +USA/MN-MDH-1643/2020|MW020074.1|20-06-08 1 +USA/MN-MDH-1610/2020|MT997728.1|20-04-28 1 +USA/IL-UW-1065/2020|MT929017.1|20-04-20 1 +USA/CA-QDX-2335/2020|MW191073.1|20-03-17 1 +USA/MI-QDX-620/2020|MW064645.1|20-03-17 1 +USA/MI-QDX-595/2020|MW064630.1|20-03-18 1 +USA/CA-CZB-2223/2020|MW035933.1|20-05-31 2 +USA/CA-CZB-4063/2020|MW134429.1|20-08-04 1 +England/OXON-B15A5/2020|20-04-29 1 +England/BRIS-129D72/2020|20-04-15 1 +USA/MN-MDH-1616/2020|MT997734.1|20-04-24 1 +USA/MN-CDC-6364/2020|MT967959.1|20-05-21 1 +USA/CA-QDX-2032/2020|MW190749.1|20-03-17 1 +USA/CA-QDX-2576/2020|MW191310.1|20-03-16 1 +USA/NY-CDC-SURV0162NYC/2020|MT434788.1|20-03-09 1 +USA/CT-UW-4372/2020|MT345874.1|20-03-30 2 +England/BRIS-12BF3E/2020|20-05-09 2 +England/BRIS-12DF1E/2020|20-06-04 1 +USA/CA-CZB-3630/2020|MW134171.1|20-07-23 1 +USA/SEARCH-1595-SAN/2020|MT810882.1|20-04-26 1 +Northern_Ireland/NIRE-1021DD/2020|20-03-14 1 +USA/CA-CZB-2429/2020|MW036038.1|20-05-21 1 +England/PHEC-15A73/2020|20-03-29 1 +USA/CA-QDX-796/2020|MW064788.1|20-03-23 1 +B90|LR898037.1|? 1 +O9|LR963074.1|? 1 +USA/TX-DSHS-1331/2020|MW322992.1|20-04-01 1 +USA/WI-UW-738/2020|MT772509.1|20-06-30 1 +USA/CO-CDPHE-2005080166/2020|MW645991.1|20-05-07 1 +USA/WY-WYPHL-20015627/2020|MW039450.1|20-05-18 1 +ISR/hCov-19-Israel-CVL-n3304/2020|MW672627.1|20-03-09 1 +England/CAMC-946515/2020|20-07-15 1 +USA/WI-UW-249/2020|MT706376.1|20-03-16 2 +USA/WI-UW-84/2020|MT706205.1|20-03-24 2 +USA/VA-DCLS-0593/2020|MT951960.1|20-03 3 +USA/TX-CDC-3009/2020|MT512440.1|20-03-10 1 +USA/FL-BPHL-1673/2020|MW166138.1|20-07-06 2 +USA/MD-MDH-0286/2020|MW240750.1|20-10-13 2 +USA/UT-04888/2020|MW084559.1|20-05-26 3 +USA/UT-04282/2020|MW084509.1|20-05-14 3 +USA/MA_MGH_00136/2020|MT520439.1|20-03-25 1 +USA/MA_MGH_00486/2020|MT520279.1|20-03-27 1 +Wales/PHWC-15DFD9/2020|20-05-14 1 +Wales/PHWC-2AF12/2020|20-04-06 2 +IHUCOVID-0441|LR794655.1|? 1 +IHUCOVID-0428|LR794641.1|? 1 +hCoV-19_Switzerland_206-7951-BE_2020_isolate|LR963255.1|? 1 +Switzerland/100363/2020|LR884411.1|20-03-20 1 +USA/UT-01683/2020|MT536956.1|20-04-13 1 +USA/UT-03892/2020|MT711875.1|20-04-13 1 +USA/CA-CZB-1414/2020|MT628125.1|20-03-16 3 +USA/CA-CZB-11962/2020|MW276532.1|20-06-17 6 +England/NORW-E7EBA/2020|20-05-06 1 +USA/CA-QDX-1044/2020|MW065007.1|20-03-17 1 +USA/WI-UW-413/2020|MT772562.1|20-04-07 1 +USA/WI-UW-288/2020|MT706396.1|20-04-08 1 +USA/SEARCH-0367-SAN/2020|MT810987.1|20-04-05 1 +USA/SEARCH-0237-SAN/2020|MT810951.1|20-04-26 4 +USA/UT-UPHL-2012945035/2020|MW421975.1|20-06-19 1 +USA/TX-QDX-3305/2020|MW522496.1|20-07-23 1 +BHR/740704818/2021|MW661071.1|21-01-26 1 +England/QEUH-E93C6A/2021|21-01-04 1 +Scotland/EDB3341/2020|20-04-08 1 +Scotland/EDB6880/2020|20-04-30 1 +USA/CA-CDC-4728/2020|MW001919.1|20-06-16 2 +USA/UT-UPHL-2012562796/2020|MW420527.1|20-07-18 1 +England/ALDP-B252AA/2020|20-11-04 2 +USA/CA-CZB-11549/2020|MW276537.1|20-07-12 2 +USA/CA-CZB-11793/2020|MW276612.1|20-09-22 3 +USA/CA-CZB-2502/2020|MW035993.1|20-05-25 2 +USA/UT-UPHL-2008916/2020|MW206164.1|20-05-28 2 +USA/MD-MDH-0227/2020|MW157244.1|20-09-23 2 +England/LOND-D5444/2020|20-04-15 2 +Scotland/CVR3238/2020|20-04-26 3 +USA/SEARCH-1102-SAN/2020|MT811533.1|20-06-18 2 +USA/CA-CZB-3893/2020|MW134296.1|20-07-21 2 +Scotland/EDB3662/2020|20-04-28 2 +England/ALDP-6FB8FB/2020|20-06-29 2 +USA/CA-CDC-4704/2020|MW001903.1|20-06-04 2 +USA/CA-CZB-4000/2020|MW134394.1|20-07-29 2 +England/LIVE-A00F3/2020|20-06-04 2 +England/QEUH-544733/2020|20-05-14 2 +England/MILK-654007/2020|20-07-04 2 +England/OXON-B1781/2020|20-05-04 2 +USA/CA-CZB-3624/2020|MW134177.1|20-07-30 1 +USA/CA-CZB-4040/2020|MW134375.1|20-08-12 2 +USA/TX-DSHS-0945/2020|MW190134.1|20-07-03 1 +USA/TX-DSHS-1150/2020|MW252120.1|20-07-03 1 +England/MILK-977645/2020|20-07-24 1 +England/CAMC-B325A1/2020|20-11-05 3 +England/PHEC-224A2/2020|20-06-08 1 +England/NORW-ECD21/2020|20-05-29 2 +England/NORW-E755B/2020|20-05-04 1 +IND/nimh-19510/2020|MW181843.1|20-05-16 1 +IND/GBRC174b/2020|MT607610.1|20-06-05 1 +Scotland/CVR3629/2020|20-05-24 1 +Scotland/QEUH-5456F9/2020|20-05-13 1 +Switzerland/240009/2020|LR880588.1|20-08-07 1 +Switzerland/240084/2020|LR880634.1|20-08-12 1 +England/LIVE-A65EF/2020|20-03-19 1 +Wales/PHWC-2B7CE/2020|20-04-12 2 +England/ALDP-94D8D9/2020|20-06-20 1 +England/ALDP-9442D4/2020|20-06-07 1 +England/PORT-2D3B4F/2020|20-04-18 1 +England/EXET-136EE8/2020|20-04-20 1 +England/PHEC-215FB/2020|20-04-29 7 +England/PHEC-1B7C1/2020|20-04-08 1 +Switzerland/120182/2020|LR860799.1|20-04-27 6 +England/ALDP-9545BA/2020|20-06-17 2 +England/BRIS-12F78D/2020|20-03-10 7 +Switzerland/100802/2020|LR824314.1|20-03-25 5 +England/NORT-282972/2020|20-03-27 1 +England/CAMB-80554/2020|20-04-09 1 +England/PHEC-20E4C/2020|20-04-16 7 +England/NORT-283B7B/2020|20-04-02 5 +England/ALDP-95665B/2020|20-06-08 7 +England/CAMB-7767B/2020|20-03-31 1 +USA/CA-CZB-1932/2020|MT750412.1|20-04-15 7 +USA/CA-CZB-1885/2020|MT750387.1|20-04-17 7 +USA/CA-CZB-2288/2020|MW036089.1|20-06-19 7 +USA/CA-CZB-3891/2020|MW134292.1|20-07-21 7 +USA/FL-BPHL-1506/2020|MW056153.1|20-07-24 7 +USA/FL-BPHL-1469/2020|MW040679.1|20-05-09 1 +England/SHEF-C9FBB/2020|20-04-11 7 +England/LOND-D6531/2020|20-04-22 1 +England/MILK-99D597/2020|20-08-30 1 +Scotland/EDB6515/2020|20-06-15 1 +FRA/Env-Di/2020|MT709105.1|20-05-14 7 +AUS/VIC1786/2020|MT612326.1|20-05-27 5 +England/CAMB-7620F/2020|20-03-30 6 +TUR/Kafkas-SARSCoV2-0013/2020|MT787564.1|20-07-15 5 +England/PHEC-1DF03/2020|20-04-08 1 +England/CAMB-1AB21F/2020|20-04-18 1 +USA/FL-BPHL-0838/2020|MT890317.1|20-06-20 7 +USA/FL-BPHL-1607/2020|MW166073.1|20-07-28 1 +England/PHEC-16F19/2020|20-03-31 1 +England/GSTT-265D4DF/2020|20-03-19 1 +Northern_Ireland/NIRE-1038B9/2020|20-04-16 8 +Northern_Ireland/NIRE-FCE85/2020|20-04-28 7 +England/BRIS-124C89/2020|20-03-26 4 +USA/WA-UW-6243/2020|MT412316.1|20-04-02 7 +BRA/LRV-SARS.CoV-2.1/2020|MT807936.1|20-05-08 1 +England/LOND-D53CF/2020|20-04-15 1 +Scotland/EDB5196/2020|20-05-18 5 +Scotland/CVR3185/2020|20-04-28 1 +England/CAMB-83A9E/2020|20-04-15 7 +England/EXET-136ED9/2020|20-04-22 7 +England/ALDP-955D39/2020|20-06-12 1 +Switzerland/300258/2020|LR898536.1|20-10-01 7 +England/SHEF-D1D3E/2020|20-04-22 2 +England/SHEF-CBE43/2020|20-04-26 1 +England/ALDP-90D6AE/2020|20-06-24 1 +POL/PL_P12/2020|MT511068.1|20-03-31 1 +England/MILK-9E2BDD/2020|20-09-20 7 +Northern_Ireland/NIRE-1088C3/2020|20-09-13 7 +England/PHEC-219E0/2020|20-05-01 7 +England/LEED-2AA59E/2020|20-04-06 5 +England/MILK-8664D7/2020|20-07-17 5 +England/MILK-629D13/2020|20-07-05 1 +England/SHEF-C13B7/2020|20-05-19 1 +England/SHEF-10B2E79/2020|20-05-16 7 +England/OXON-AEF9E/2020|20-04-07 7 +Wales/PHWC-162E7A/2020|20-05-19 1 +England/ALDP-954C6A/2020|20-06-13 7 +England/ALDP-A524EB/2020|20-10-07 1 +Wales/ALDP-6C3E72/2020|20-07-01 6 +England/ALDP-5A15D0/2020|20-06-14 7 +England/PHEC-20B81/2020|20-04-16 1 +England/MILK-992E97/2020|20-08-26 1 +England/QEUH-95DD9B/2020|20-08-07 7 +England/MILK-9570D4/2020|20-06-10 7 +England/LIVE-9BC33/2020|20-04-21 1 +USA/TX-DSHS-0361/2020|MW114997.1|20-06-13 7 +England/CAMB-1B087F/2020|20-05-04 7 +England/PHEC-2223F/2020|20-04-30 7 +England/ALDP-5A2A49/2020|20-06-14 7 +England/ALDP-5A2D6E/2020|20-06-14 7 +USA/WA-S1407/2020|MT821568.1|20-05-19 8 +USA/WA-S1434/2020|MT821707.1|20-05-21 1 +Scotland/CVR1557/2020|20-04-03 7 +Wales/PHWC-34610/2020|20-04-21 1 +BGD/BCSIR_NILMRC_104/2020|MT655948.1|20-06-07 7 +BGD/BCSIR_NILMRC_133/2020|MT731733.1|20-06-18 7 +England/CAMB-82060/2020|20-04-21 1 +England/CAMB-82E1B/2020|20-04-14 1 +SAU/KFSHRC44/2020|MT820480.1|20-04-11 1 +SAU/KAIMRC67/2020|MT820487.1|20-04-01 5 +Scotland/EDB300/2020|20-03-29 7 +Scotland/CVR3194/2020|20-04-28 5 +England/BIRM-6529A/2020|20-09-30 1 +USA/WA-S2831/2020|MW077478.1|20-09-08 8 +IND/GBRC203a/2020|MT669321.1|20-06-07 1 +USA/WA-S2809/2020|MW077484.1|20-08-31 1 +England/CAMB-7C12A/2020|20-04-13 1 +England/CAMB-83348/2020|20-04-15 1 +England/CAMC-946506/2020|20-07-15 1 +AUS/VIC2173/2020|MT972184.1|20-06-24 7 +England/SHEF-D1CE6/2020|20-04-28 5 +England/SHEF-C0F96/2020|20-04-15 7 +Netherlands/NA_359/2020|LR883961.1|20-04-07 1 +Netherlands/NA_589/2020|LR883868.1|20-04-05 7 +England/ALDP-BCA4B0/2020|20-11-23 1 +England/ALDP-119985B/2021|21-01-27 1 +USA/WI-UW-06/2020|MT772088.1|20-03-21 1 +USA/MI-MDHHS-SC20124/2020|MT439284.1|20-03-24 2 +USA/WA-S3017/2020|MW474188.1|20-08-15 1 +USA/WA-S2852/2020|MW079820.1|20-09-01 1 +CHL/Santiago-PUC_MVL_0011/2020|MW365225.1|20-03-18 3 +USA/WI-UW-269/2020|MT429191.1|20-04-06 2 +England/CAMB-7A7DF/2020|20-04-02 1 +Netherlands/NA_18/2020|LR878352.1|20-03-09 3 +USA/VA-DCLS-1557/2020|MW208010.1|20-08 1 +USA/FL-BPHL-1018/2020|MT966219.1|20-07-17 1 +USA/FL-BPHL-1022/2020|MT966234.1|20-07-20 1 +USA/FL-CDC-LC0001066/2020|MW634501.1|20-12-26 1 +USA/CA-QDX-434/2020|MW064457.1|20-03-20 1 +USA/UT-02231/2020|MT444626.1|20-04-15 1 +USA/WA-S2850/2020|MW079819.1|20-09-01 1 +USA/WA-S2746/2020|MT947577.1|20-07-19 1 +USA/WI-UW-879/2020|MT846567.1|20-07-14 2 +USA/UT-05590/2020|MW084605.1|20-06-01 1 +Netherlands/NA_588/2020|LR883860.1|20 1 +Netherlands/NA_583/2020|LR883819.1|20 2 +USA/WA-S2992/2020|MW474166.1|20-08-12 2 +USA/CA-CZB-5698/2020|MW276260.1|20-07-23 2 +USA/GA-CDC-4459/2020|MW130876.1|20-09-11 2 +USA/NY-QDX-1993/2020|MW190794.1|20-03-18 1 +USA/FL-BPHL-0321/2020|MT757040.1|20-04-16 2 +USA/FL-BPHL-1841/2020|MW206510.1|20-04-08 1 +USA/MN-MDH-1583/2020|MT997701.1|20-05-28 1 +USA/MN-MDH-1585/2020|MT997703.1|20-05-22 1 +USA/WI-UW-1126/2020|MT929103.1|20-08-13 1 +USA/WI-UW-1071/2020|MT929023.1|20-07-29 1 +USA/VA-DCLS-0481/2020|MT951936.1|20-05 2 +USA/SEARCH-0792-SAN/2020|MT811373.1|20-04-06 1 +KOR/YS006/2020|MW345824.1|20-06-04 1 +KOR/YS008/2020|MW345825.1|20-06-07 1 +USA/OR-QDX-3447/2020|MW521776.1|20-08-11 1 +USA/WA-S1037/2020|MT642186.1|20-05-03 1 +USA/NMDOH-2020305755/2020|MW070069.1|20-08-21 1 +USA/NMDOH-2020308468/2020|MW228235.1|20-08-24 1 +USA/MN-QDX-981/2020|MW065078.1|20-03-15 1 +USA/MD-MDH-0164/2020|MT937827.1|20-07-15 1 +USA/VA-DCLS-1006/2020|MT952676.1|20-06 1 +USA/CA-QDX-2685/2020|MW191430.1|20-03-17 1 +USA/MN-QDX-1328/2020|MW065415.1|20-03-15 1 +USA/TX-DSHS-1210/2020|MW246004.1|20-03-18 1 +USA/UT-00495/2020|MT444543.1|20-04-02 1 +USA/UT-00353/2020|MT444564.1|20-03-27 1 +USA/FL-BPHL-1651/2020|MW166116.1|20-07-03 1 +USA/FL-BPHL-2138/2020|MW286694.1|20-06-27 1 +England/CAMB-7771E/2020|20-03-30 1 +England/CAMB-7DC91/2020|20-04-05 1 +USA/VA-DCLS-0426/2020|MT679166.1|20-05 1 +USA/VA-DCLS-0187/2020|MT450889.1|20-04 1 +Scotland/EDB3598/2020|20-04-27 1 +Scotland/EDB2451/2020|20-04-23 1 +USA/FL-BPHL-1724/2020|MW206414.1|20-10-01 1 +USA/FL-BPHL-1147/2020|MT956757.1|20-08-18 1 +USA/CA-CZB-3886/2020|MW134282.1|20-07-21 2 +USA/IL-UW-385/2020|MT772536.1|20-05-23 2 +USA/NMDOH-2020135004/2020|MW006582.1|20-06-18 1 +USA/NMDOH-2020126568/2020|MW006567.1|20-06-15 1 +USA/UT-UPHL-201016722/2020|MW181503.1|20-05-29 1 +USA/UT-03041/2020|MW053962.1|20-05-01 1 +USA/MD-MDH-0129/2020|MT937319.1|20-07-08 1 +USA/TX-DSHS-1524/2020|MW349179.1|20-06-23 1 +USA/TX-QDX-261/2020|MT806804.1|20-05-01 2 +USA/NMDOH-2020174703/2020|MW070044.1|20-07-02 1 +USA/WA-S2725/2020|MT947550.1|20-07-07 1 +USA/TX-DSHS-0675/2020|MW093567.1|20-07-16 1 +England/BRIS-128CA3/2020|20-04-14 1 +England/BRIS-12B1CF/2020|20-05-15 1 +USA/WI-UW-491/2020|MT750074.1|20-06-11 1 +USA/WI-UW-522/2020|MT750102.1|20-06-24 1 +USA/WA-QDX-2548/2020|MW191307.1|20-03-16 1 +AUS/VIC1161/2020|MT451779.1|20-04-09 1 +USA/VA-DCLS-1282/2020|MW067700.1|20-08 1 +USA/COVID20-1144/2020|MW067817.1|20-07-10 1 +Wales/PHWC-1662B6/2020|20-06-13 1 +Wales/PHWC-26B12/2020|20-03-29 1 +USA/TX-DSHS-1035/2020|MW228203.1|20-06-15 1 +USA/TX-DSHS-1428/2020|MW326536.1|20-06-23 1 +USA/TX-DSHS-0051/2020|MW039116.1|20-05-09 1 +USA/TX-DSHS-1673/2020|MW406726.1|20-06-24 1 +USA/UT-UPHL-2012691008/2020|MW420625.1|20-08-08 1 +USA/VA-DCLS-1517/2020|MW197475.1|20-07 1 +USA/WI-UW-1268/2020|MW035438.1|20-08-25 1 +USA/UT-UPHL-201232337/2020|MW375991.1|20-07-31 1 +Scotland/EDB6146/2020|20-05-14 1 +Scotland/EDB6052/2020|20-05-08 1 +England/CAMB-7FBCF/2020|20-04-16 1 +England/CAMB-784BC/2020|20-04-06 1 +USA/TX-DSHS-0596/2020|MW075691.1|20-06-03 1 +USA/TX-DSHS-0971/2020|MW217406.1|20-06-15 1 +USA/FL-BPHL-1462/2020|MW040672.1|20-04-20 1 +USA/FL-BPHL-1813/2020|MW206463.1|20-04-03 2 +BHR/600023154_S29/2020|MW237743.1|20-10-14 2 +BHR/920262933_S19_L001/2020|MW228054.1|20-06-19 3 +England/PHEC-1C872/2020|20-04-16 1 +England/BRIS-130015/2020|20-04-11 1 +England/CAMC-B533A0/2020|20-11-08 1 +England/MILK-9781E9/2020|20-07-29 1 +321398|LR962930.1|20-10-13 1 +England/QEUH-B8053B/2020|20-11-14 1 +England/CAMC-A3E658/2020|20-10-05 2 +England/MILK-A47DDF/2020|20-10-05 11 +IND/GBRC-366a/2020|MT951170.1|20-06-18 1 +IND/GBRC-392b/2020|MT954593.1|20-07-06 2 +SAU/596/2020|MT755893.1|20-02-18 1 +BHR/920265546_S18_L001/2020|MW228055.1|20-06-21 1 +England/ALDP-EEACDD/2021|21-01-03 5 +England/LIVE-DDCD09/2021|21-01-02 1 +USA/VA-DCLS-0229/2020|MT558657.1|20-04 1 +USA/VA_NIDDL_3033/2020|MT776421.1|20-04-07 1 +USA/WA-S1281/2020|MT821642.1|20-05-12 1 +USA/WA-S2367/2020|MT831837.1|20-06-11 3 +USA/VA-DCLS-0804/2020|MT925987.1|20-07 3 +USA/VA-DCLS-1454/2020|MW067779.1|20-08 5 +England/MILK-99DB3B/2020|20-08-31 1 +England/ALDP-5D3DEC/2020|20-06-19 1 +USA/UT-UPHL-2012381006/2020|MW421943.1|20-06-18 1 +USA/UT-UPHL-2012984468/2020|MW421976.1|20-06-16 1 +USA/CA-CZB-11521/2020|MW276549.1|20-07-18 2 +USA/CA-CZB-11513/2020|MW276567.1|20-08-02 2 +USA/UT-UPHL-2012474856/2020|MW420449.1|20-08-08 2 +USA/FL-BPHL-2857/2020|MW566820.1|20-09-17 2 +USA/CA-CZB-3903/2020|MW134295.1|20-07-24 2 +USA/SEARCH-1094-SAN/2020|MT811526.1|20-06-19 2 +Switzerland/220021/2020|LR882232.1|20-07-27 1 +England/QEUH-96E08F/2020|20-08-18 2 +England/CAMC-B34141/2020|20-11-05 2 +England/MILK-A795AF/2020|20-10-14 2 +USA/PA-CDC-LC0011899/2021|MW643305.1|21-01-29 1 +USA/TX-DSHS-1114/2020|MW228282.1|20-06-21 1 +England/CAMC-94C02D/2020|20-07-15 1 +England/MILK-95DBDD/2020|20-06-20 1 +Scotland/CVR2213/2020|20-04-11 1 +Scotland/CVR1909/2020|20-04-06 1 +England/PHEC-1555C0/2021|21-01-16 1 +England/MILK-E6578E/2020|20-12-30 1 +England/CAMC-106052A/2021|21-01-16 1 +England/LOND-12F6633/2020|20-12-15 1 +USA/TX-DSHS-0342/2020|MW114979.1|20-06-13 1 +USA/TX-DSHS-1397/2020|MW309099.1|20-05-20 1 +USA/WA-S2264/2020|MT831437.1|20-06-09 1 +USA/WA-S1922/2020|MT831459.1|20-06-03 2 +England/CAMB-83FF9/2020|20-04-25 1 +England/CAMB-75895/2020|20-03-18 1 +England/LOND-D6EBE/2020|20-04-03 4 +England/SHEF-C88A2/2020|20-04-21 1 +USA/WA-S860/2020|MT642111.1|20-04-24 1 +USA/MD-MDH-0380/2020|MW292639.1|20-10-27 1 +England/QEUH-A0AFB4/2020|20-10-01 1 +England/ALDP-C48747/2020|20-12-12 1 +Switzerland/230051/2020|LR882355.1|20-08-04 7 +Wales/MILK-9C729D/2020|20-09-12 1 +England/BRIS-12A70A/2020|20-05-01 1 +England/CAMB-77F61/2020|20-04-01 1 +PHL/UPMNIH_C1/2020|MW243995.1|20-07 2 +PHL/COVID-6009/2020|MT919790.1|20-07-18 1 +England/CAMC-94328A/2020|20-07-25 1 +England/CAMC-9424A3/2020|20-07-21 1 +USA/MA-QDX-3180/2021|MW505247.1|21-01-05 1 +USA/PA-CDC-STM-A100419/2021|MW519668.1|21-01-06 1 +USA/VA-DCLS-1485/2020|MW205988.1|20-07 1 +USA/VA-DCLS-1212/2020|MW067767.1|20-06 1 +USA/CA-CZB-11677/2020|MW276577.1|20-08-16 1 +USA/CA-CZB-13945/2020|MW565647.1|20-06-22 1 +England/QEUH-9AE4E1/2020|20-09-01 2 +England/OXON-AEBC7/2020|20-04-12 1 +England/LOND-D4C6B/2020|20-04-15 2 +Wales/PHWC-164485/2020|20-05-02 1 +England/ALDP-5C701F/2020|20-06-19 7 +England/ALDP-51F142/2020|20-06-02 1 +USA/CA-CZB-10287/2020|MW276300.1|20-09-03 2 +USA/CA-CZB-3356/2020|MW134125.1|20-07-14 8 +Northern_Ireland/NIRE-10677D/2020|20-05-14 1 +Northern_Ireland/NIRE-106740/2020|20-05-14 1 +England/MILK-9705F4/2020|20-08-18 1 +England/ALDP-9B6440/2020|20-08-28 1 +England/NORW-EE34B/2020|20-03-24 1 +England/NORW-E8693/2020|20-04-16 1 +Switzerland/250070/2020|LR881870.1|20-08-18 7 +England/QEUH-9B5344/2020|20-09-02 5 +England/ALDP-6839B9/2020|20-07-02 7 +England/ALDP-6BAB59/2020|20-06-29 1 +Scotland/QEUH-96C6AD/2020|20-08-07 3 +Switzerland/270108/2020|LR882077.1|20-09-03 7 +England/ALDP-68EFBC/2020|20-07-02 7 +England/ALDP-91F278/2020|20-06-23 1 +USA/GA-CDC-6435/2020|MT967964.1|20-07-29 1 +USA/WI-UW-1202/2020|MW035373.1|20-08-06 7 +England/LIVE-A2765/2020|20-05-20 1 +England/ALDP-658C87/2020|20-07-03 7 +Northern_Ireland/NIRE-FBB52/2020|20-04-13 7 +Northern_Ireland/NIRE-FAC7E/2020|20-04-15 1 +England/NORT-283BE4/2020|20-04-03 7 +England/CAMB-81070/2020|20-04-20 1 +DK/AD3_Farm1/2020|MT919525.1|20-06-14 1 +DK/KL14_Farm1/2020|MT919536.1|20-06-17 1 +England/BRIS-123EDF/2020|20-04-08 1 +England/BRIS-123F09/2020|20-04-08 1 +EGY/EGY_CCHE57357_A_45/2020|MW467453.1|20-06-20 1 +EGY/CUNCI-HGC5I001/2020|MT611527.1|20-06-02 1 +Scotland/QEUH-7B078B/2020|20-07-19 2 +England/MILK-993EA5/2020|20-08-22 7 +USA/ME-HETL-J0061/2020|MT886346.1|20-03-20 7 +USA/CA-QDX-1599/2020|MW190335.1|20-03-19 5 +England/QEUH-9600C9/2020|20-08-05 1 +England/QEUH-9B92F8/2020|20-09-07 7 +USA/FL-BPHL-0905/2020|MT966149.1|20-06-24 7 +USA/FL-BPHL-0303/2020|MT757111.1|20-05-30 7 +England/CAMB-76490/2020|20-03-30 1 +England/CAMB-7CBD1/2020|20-04-05 1 +Japan/TKYVE11964_2020/2020|LC556322.1|20-04 7 +LC573289.2|20-06 1 +USA/WI-UW-114/2020|MT706234.1|20-03-30 1 +England/CAMB-74D5B/2020|20-03-19 1 +USA/CA-CZB-1871/2020|MT750377.1|20-04-28 7 +USA/CA-CZB-2358/2020|MW036004.1|20-05-13 2 +Wales/PHWC-1645BF/2020|20-05-06 7 +Wales/PHWC-33C88/2020|20-04-17 5 +USA/WA-S2724/2020|MT947562.1|20-07-04 1 +USA/WA-S2728/2020|MT947566.1|20-07-08 1 +England/BRIS-127363/2020|20-04-24 1 +England/BRIS-127A40/2020|20-04-17 1 +Northern_Ireland/NIRE-FB9C1/2020|20-08-13 7 +England/MILK-99DE32/2020|20-08-31 7 +England/QEUH-99923A/2020|20-08-24 1 +England/MILK-825C54/2020|20-07-16 1 +England/BRIS-125D67/2020|20-03-29 1 +England/BRIS-12C841/2020|20-05-12 7 +England/ALDP-95A754/2020|20-06-13 1 +England/ALDP-95CEA8/2020|20-06-15 1 +England/MILK-993300/2020|20-08-26 1 +Wales/PHWC-162751/2020|20-05-27 7 +England/ALDP-497D12/2020|20-06-03 1 +USA/WI-UW-982/2020|MT846668.1|20-07-21 1 +USA/SEARCH-1050-SAN/2020|MT811490.1|20-06-21 7 +USA/FL-QDX-228/2020|MT806770.1|20-04-18 1 +USA/VA-DCLS-0920/2020|MT929088.1|20-05 1 +England/ALDP-71D072/2020|20-07-01 1 +England/MILK-9573DB/2020|20-06-10 1 +England/QEUH-9B6EAC/2020|20-09-09 5 +England/NORT-2A4CAE/2020|20-09-17 1 +Northern_Ireland/NIRE-FB3A5/2020|20-08-29 7 +Northern_Ireland/NIRE-FB369/2020|20-08-31 1 +England/LEED-2AA4EC/2020|20-04-06 8 +England/LEED-2AA394/2020|20-03-31 1 +England/BRIS-1854318/2020|20-04-28 7 +England/BRIS-12E6FA/2020|20-04-20 2 +Wales/PHWC-16881C/2020|20-04-21 5 +Wales/PHWC-3612C/2020|20-04-28 1 +England/SHEF-C184F/2020|20-08-31 5 +England/ALDP-9D8FFC/2020|20-09-18 7 +England/NORT-28B1EA/2020|20-04-18 1 +England/NORT-28B28D/2020|20-04-18 1 +England/ALDP-5D52BE/2020|20-06-18 7 +England/ALDP-6FAF24/2020|20-06-29 7 +England/MILK-B01F25/2020|20-10-23 7 +Switzerland/210050/2020|LR882268.1|20-07-19 1 +England/ALDP-691499/2020|20-07-02 7 +England/ALDP-4A2BFC/2020|20-05-22 1 +England/ALDP-9B5BC4/2020|20-08-28 7 +England/ALDP-49F5B8/2020|20-05-22 7 +USA/WA-S2573/2020|MT831840.1|20-06-17 1 +USA/WA-S2761/2020|MT947580.1|20-07-29 7 +England/QEUH-A9F5D0/2020|20-10-20 7 +England/QEUH-96AEF2/2020|20-08-15 2 +Netherlands/NA_436/2020|LR883367.1|20-04-07 5 +Netherlands/Friesland_33/2020|LR883315.1|20-04-14 1 +AUS/VIC3114/2020|MT972550.1|20-07-06 1 +AUS/VIC9664/2020|MW156172.1|20-08-12 5 +England/MILK-9C4087/2020|20-09-09 1 +England/QEUH-96F349/2020|20-08-17 7 +England/BIRM-5FC3B/2020|20-05-28 6 +England/PHEC-13ADF/2020|20-03-13 1 +England/ALDP-951E49/2020|20-06-10 7 +England/ALDP-9557A4/2020|20-06-12 1 +USA/CA-CZB-2205/2020|MW035956.1|20-05-27 1 +USA/CA-CZB-2184/2020|MW035923.1|20-05-26 1 +Switzerland/220001/2020|LR882220.1|20-07-24 7 +England/BIRM-6BECD/2020|20-11-17 1 +USA/MS-CDC-6546/2020|MW279423.1|20-08-25 1 +USA/TX-DSHS-1780/2020|MW425014.1|20-07-07 1 +England/ALDP-94A63C/2020|20-06-11 1 +England/ALDP-52A636/2020|20-06-01 1 +ZW-6983|LR963462.1|20-05-01 1 +ZW-6978|LR963455.1|20-05-01 1 +England/ALDP-952A44/2020|20-06-21 1 +England/QEUH-9B4A22/2020|20-09-07 1 +Scotland/CVR3062/2020|20-04-24 1 +Scotland/CVR2435/2020|20-04-14 1 +England/OXON-B0922/2020|20-03-28 1 +AUS/VIC995/2020|MT451680.1|20-03-31 1 +GHA/WACCBIP_nCoV_GS115/2021|MW571124.1|21-01-07 1 +USA/GA-CDC-LC0010641/2021|MW640882.1|21-01-26 1 +EGY/CUNCI-HGC9I036/2020|MW504609.1|20-12-25 1 +EGY/CUNCI-HGC12I049/2021|MW595907.1|21-01-03 1 +USA/COVID20-0537/2020|MT981422.1|20-06-04 2 +USA/COVID20-1129/2020|MW067826.1|20-07-10 2 +England/CAMB-83FBD/2020|20-04-22 1 +England/CAMB-1AD004/2020|20-04-30 1 +England/ALDP-952A53/2020|20-06-13 1 +England/ALDP-95A745/2020|20-06-13 1 +USA/UT-UPHL-2009700/2020|MW206352.1|20-07-26 1 +USA/UT-UPHL-2012905899/2020|MW420810.1|20-08-08 1 +USA/UT-05592/2020|MW054143.1|20-06-01 1 +USA/UT-UPHL-201003477/2020|MW190173.1|20-06-19 1 +USA/FL-BPHL-0876/2020|MT890355.1|20-07-09 4 +USA/TX-DSHS-0347/2020|MW114984.1|20-06-13 1 +USA/UT-02970/2020|MW053933.1|20-05-01 1 +USA/UT-08378/2020|MW206039.1|20-05-26 1 +USA/MD-MDH-0071/2020|MT827237.1|20-05-25 1 +USA/MD-MDH-0066/2020|MT827232.1|20-05-25 1 +England/MILK-9934B2/2020|20-08-26 1 +Switzerland/240029/2020|LR880608.1|20-08-10 1 +USA/OH-UHTL-3/2020|MW585340.1|20-01-05 1 +USA/UT-UPHL-2012522014/2020|MW419981.1|20-12-18 1 +England/MILK-958598/2020|20-06-09 1 +England/ALDP-4F4092/2020|20-06-24 1 +England/LIVE-A91F7/2020|20-03-25 1 +England/CAMB-1AE865/2020|20-04-30 2 +USA/UT-UPHL-201023823/2020|MW181538.1|20-06-01 1 +USA/UT-UPHL-2012322580/2020|MW424914.1|20-06-19 1 +USA/NJ-CDC-2-3769299/2020|MW550616.1|20-12-30 1 +USA/MA-MGH-03346/2020|MW454682.1|20-11-05 1 +England/ALDP-955F15/2020|20-06-08 1 +England/MILK-9A6856/2020|20-08-31 1 +England/ALDP-94EB75/2020|20-06-17 1 +England/ALDP-6E2806/2020|20-07-01 2 +USA/WA-S4490/2021|MW648014.1|21-01-21 1 +USA/WA-S3458/2020|MW494078.1|20-12-07 1 +England/MILK-5642D2/2020|20-06-10 2 +England/CAMB-1B3593/2020|20-05-26 2 +Switzerland/310517/2020|LR898824.1|20-10-08 1 +England/MILK-9AB1A1/2020|20-08-31 1 +Scotland/QEUH-A9E7BD/2020|20-10-20 1 +Scotland/EDB7778/2020|20-09-16 1 +SAU/578/2020|MT755891.1|20-02-17 1 +Scotland/EDB6640/2020|20-05-28 1 +Scotland/CVR3970/2020|20-08-22 1 +England/MILK-A7D5AB/2020|20-10-13 3 +USA/GA-CDC-5095/2020|MW053297.1|20-06-29 3 +USA/FL-BPHL-1097/2020|MT956684.1|20-08-19 1 +Scotland/EDB6391/2020|20-05-13 1 +Scotland/EDB5108/2020|20-03-31 1 +USA/VA-DCLS-0489/2020|MT951943.1|20-05 1 +USA/VA-DCLS-1388/2020|MW067734.1|20-07 1 +Scotland/QEUH-961BB8/2020|20-08-02 1 +Switzerland/250091/2020|LR881897.1|20-08-19 1 +England/MILK-9750EF/2020|20-08-21 1 +England/MILK-9C3D45/2020|20-09-09 1 +USA/TX-DSHS-1179/2020|MW246020.1|20-06-16 2 +USA/MN-MDH-2008/2020|MW279332.1|20-09-29 1 +USA/MD-MDH-0853/2021|MW621444.1|21-01-20 1 +England/PHEC-14F392/2020|20-12-24 1 +Netherlands/Friesland_9/2020|LR878060.1|20-03-30 1 +Netherlands/Friesland_6/2020|LR878056.1|20-03-28 1 +England/CAMB-737D6/2020|20-03-31 1 +England/CAMB-1B08D9/2020|20-05-04 1 +IND/GBRC238b/2020|MT676367.1|20-06-12 2 +IND/GBRC209a/2020|MT664202.1|20-06-11 1 +Wales/PHWC-360A7/2020|20-04-29 1 +Wales/PHWC-260AA/2020|20-03-24 1 +USA/WA-S2012/2020|MT831128.1|20-06-04 2 +USA/WA-S1775/2020|MT834200.1|20-06-01 1 +USA/IN-CDC-STM-A100406/2021|MW519679.1|21-01-06 1 +USA/UT-UPHL-2101110381/2021|MW579008.1|21-01-15 1 +England/ALDP-651C9D/2020|20-07-04 7 +Scotland/CVR3919/2020|20-06-21 1 +England/QEUH-96E27A/2020|20-08-20 2 +England/MILK-74C001/2020|20-06-29 5 +England/ALDP-955FAC/2020|20-06-08 1 +England/ALDP-49E391/2020|20-05-20 1 +USA/MD-MDH-0841/2021|MW621433.1|21-01-17 1 +USA/OK-USAFSAM-S0004/2021|MW559120.1|21-01-11 1 +USA/FL-CDC-21490280/2021|MW667214.1|21-01-27 1 +USA/NY-CDC-21712201/2021|MW668883.1|21-02-04 1 +England/QEUH-9DE381/2020|20-09-21 1 +England/QEUH-95E7D8/2020|20-08-06 7 +England/NOTT-111E3E/2020|20-06-10 5 +England/NOTT-111117/2020|20-05-03 1 +EGY/CUNCI-HGC5I011/2020|MT611536.1|20-06-02 1 +Scotland/CVR41/2020|20-03-13 1 +England/ALDP-9ECEAD/2020|20-05-05 1 +England/BRIS-12DC53/2020|20-05-02 1 +England/ALDP-A525BB/2020|20-10-07 1 +ISR/NH_M2_0614/2020|MW194121.1|20-06-14 8 +England/MILK-A45AF8/2020|20-10-06 7 +Scotland/QEUH-A613BF/2020|20-10-13 1 +Switzerland/180039/2020|LR861669.1|20-07-01 1 +Switzerland/220022/2020|LR882244.1|20-07-27 1 +England/NORW-E8709/2020|20-04-18 6 +UnitedKingdom/NORW-EBD5F/2020|LR821823.1|20-05-06 8 +England/MILK-A18C8F/2020|20-10-03 1 +England/ALDP-C3C1FD/2020|20-12-10 1 +Wales/PHWC-15E0B7/2020|20-05-13 1 +Wales/PHWC-30957/2020|20-04-08 1 +TUR/Kafkas-SARSCoV2-0036/2020|MT787743.1|20-07-15 1 +TUR/Kafkas-SARSCoV2-0026/2020|MT789689.1|20-07-15 1 +USA/CA-CZB-4049/2020|MW134382.1|20-08-21 5 +USA/CA-CZB-3294/2020|MW134115.1|20-07-20 1 +England/MILK-ABBCCA/2020|20-10-21 7 +England/MILK-ACCF27/2020|20-10-21 7 +England/ALDP-907D09/2020|20-06-22 1 +England/MILK-85E3E4/2020|20-07-18 1 +Wales/PHWC-16578B/2020|20-06-07 1 +Wales/PHWC-166104/2020|20-05-15 7 +England/ALDP-94D8F7/2020|20-06-20 1 +England/NOTT-111BFB/2020|20-05-29 1 +England/PORT-2F5752/2020|20-10-13 1 +England/QEUH-96A4C3/2020|20-08-13 1 +USA/VA-DCLS-1073/2020|MT981458.1|20-06 6 +USA/VA-DCLS-0120/2020|MT482111.1|20-04 1 +England/ALDP-9D9104/2020|20-09-18 7 +England/CAMC-A40F67/2020|20-10-06 1 +England/WSFT-25C13CB/2020|20-04-17 1 +England/PORT-2F5D9C/2020|20-06-05 1 +ITA/APU-POLBA09/2020|MW485806.1|20-08-26 1 +DV_IZSPB_236_S50|LR992121.1|20-08-29 1 +England/MILK-62FD59/2020|20-07-05 1 +England/ALDP-90DDC7/2020|20-06-26 1 +USA/IL-UW-1082/2020|MT929034.1|20-07-27 1 +USA/FL-BPHL-1773/2020|MW206588.1|20-07-29 7 +USA/WA-S2598/2020|MT831859.1|20-06-18 5 +USA/WA-S1840/2020|MT834024.1|20-05-27 8 +USA/WA-S1246/2020|MT821587.1|20-05-11 8 +USA/WA-S820/2020|MT641503.1|20-04-15 1 +England/CAMB-80B43/2020|20-04-11 1 +England/CAMB-7666D/2020|20-03-29 1 +AUS/VIC13094/2020|MW185501.1|20-07-31 1 +AUS/VIC9179/2020|MW153248.1|20-08-21 1 +AUS/VIC11646/2020|MW155572.1|20-07-22 1 +England/CAMC-947259/2020|20-07-21 1 +England/MILK-9927C9/2020|20-08-27 1 +England/CAMB-1AA438/2020|20-04-17 1 +England/CAMB-1AFB7A/2020|20-05-02 1 +England/NORT-282796/2020|20-03-28 1 +England/NORT-2839AE/2020|20-04-01 5 +England/QEUH-96E025/2020|20-08-18 1 +Scotland/QEUH-94375E/2020|20-08-02 1 +USA/CA-CZB-4099/2020|MW134393.1|20-08-15 1 +USA/UT-UPHL-2009621/2020|MW206324.1|20-07-18 1 +USA/GA-CDC-LC0013501/2021|MW643935.1|21-02-02 7 +England/MILK-1169960/2021|21-01-25 5 +USA/WA-S4100/2021|MW555971.1|21-01-18 1 +USA/WA-S4074/2021|MW555949.1|21-01-19 1 +England/ALDP-CB55B4/2020|20-12-20 1 +England/CAMC-CF4B5D/2020|20-12-21 1 +Wales/PHWC-340A9/2020|20-04-20 1 +Wales/PHWC-1667A8/2020|20-05-26 1 +England/PHEC-14F5D8/2020|20-12-29 1 +Scotland/EDB11343/2020|20-12-26 1 +England/LIVE-DAB556/2020|20-10-18 2 +England/PHEC-14DE93/2020|20-11-11 1 +USA/COVID20-0777/2020|MW002812.1|20-06-26 1 +USA/VA-DCLS-1147/2020|MT992749.1|20-04 1 +USA/VA-DCLS-1512/2020|MW197472.1|20-07 2 +USA/CA-CZB-1275/2020|MT533209.1|20-04-16 1 +USA/NY-QDX-2365/2020|MW191144.1|20-03-16 1 +ARG/Cordoba-891/2020|MW633900.1|20-09-14 1 +USA/CA-CZB-5668/2020|MW276489.1|20-08-08 1 +USA/CA-CZB-2139/2020|MT750510.1|20-05-21 1 +USA/FL-BPHL-1324/2020|MW023523.1|20-07-14 1 +USA/FL-BPHL-1988/2020|MW286761.1|20-04-18 1 +USA/NC-QDX-174/2020|MT786825.1|20-04-27 1 +USA/1453xE2/2020|MW521402.1|20-07-05 1 +USA/UT-UPHL-2012905638/2020|MW420809.1|20-08-10 1 +USA/WA-S2867/2020|MW173410.1|20-09-20 1 +ISR/hCov-19-Israel-CVL-n-9434/2020|MW674838.1|20-04-19 2 +England/CAMC-947D3A/2020|20-07-17 1 +USA/IL-UW-1064/2020|MT929016.1|20-07-26 1 +USA/VA-DCLS-1666/2020|MW280480.1|20-08 3 +England/RAND-12B3F28/2021|21-02-09 1 +England/RAND-12B3CF4/2021|21-02-09 1 +USA/MA-MGH-02814/2020|MW454549.1|20-09-24 1 +USA/MA-MGH-03386/2020|MW454697.1|20-11-09 1 +USA/CA-CZB-10856/2020|MW276376.1|20-07-28 2 +USA/WI-UW-994/2020|MT846680.1|20-07-20 1 +England/BRIS-12C762/2020|20-05-13 1 +England/BRIS-127AD7/2020|20-04-16 1 +England/BRIS-12D9F2/2020|20-05-06 1 +England/BRIS-12B156/2020|20-05-08 1 +England/ALDP-B75065/2020|20-11-12 2 +Scotland/QEUH-AD4AFE/2020|20-10-27 2 +BGD/BCSIR_NILMRC_70/2020|MT601283.1|20-05-26 1 +BGD/BCSIR_NILMRC_288/2020|MT847222.1|20-07-14 1 +England/MILK-EB78C6/2021|21-01-02 1 +England/CAMC-C44338/2020|20-12-10 4 +USA/CA-LACPHL-AE00081/2020|MW642471.1|20-08-22 1 +USA/CA-LACPHL-AE00075/2020|MW642465.1|20-08-21 1 +Switzerland/300264/2020|LR898541.1|20-10-01 1 +England/QEUH-963433/2020|20-08-10 1 +England/MILK-ACC08E/2020|20-10-21 2 +Scotland/QEUH-9696CE/2020|20-08-14 1 +England/MILK-BB0022/2020|20-11-18 1 +England/ALDP-A6CC8C/2020|20-10-14 2 +Northern_Ireland/NIRE-FB967/2020|20-08-17 1 +England/QEUH-7A4BBB/2020|20-07-14 1 +England/BRIS-185470D/2020|20-05-01 1 +England/BRIS-12AF02/2020|20-05-01 1 +England/ALDP-9558ED/2020|20-06-12 1 +England/NORT-286255/2020|20-09-16 1 +Switzerland/250060/2020|LR881882.1|20-08-18 1 +England/QEUH-A77F0D/2020|20-10-12 1 +England/LOND-126DFA5/2020|20-12-27 5 +Wales/PHWC-4846A4/2020|20-10-24 3 +England/QEUH-AD487C/2020|20-10-26 1 +England/QEUH-9B7B2C/2020|20-09-03 1 +England/CAMB-72B44/2020|20-03-22 1 +England/CAMB-822D3/2020|20-04-12 1 +Japan/TKYE627000_2020/2020|LC593811.1|20-08 1 +Japan/TKYE624705_2020/2020|LC593810.1|20-07 1 +England/QEUH-9F9265/2020|20-09-26 1 +England/QEUH-98EE43/2020|20-08-25 1 +IND/GBRC455b/2020|MW600453.1|20-12-24 1 +IND/GBRC455a/2020|MW600436.1|20-12-24 2 +USA/FL-BPHL-2014/2020|MW286586.1|20-06-19 1 +USA/MA_MGH_00693/2020|MT520290.1|20-04-06 1 +CHL/Santiago-PUC_MVL_0491/2020|MW365473.1|20-05-13 2 +CHL/Puerto_Montt-PUC_MVL_0534/2020|MW365467.1|20-05-27 2 +ARG/Cordoba-2858/2020|MW633904.1|20-09-14 1 +ARG/Cordoba-1484/2020|MW633909.1|20-09-17 1 +England/MILK-95862C/2020|20-06-11 7 +England/ALDP-94EF88/2020|20-06-16 1 +Scotland/QEUH-A00DF0/2020|20-10-02 5 +England/ALDP-9CC5BD/2020|20-09-15 7 +England/ALDP-9BEB16/2020|20-09-09 1 +England/ALDP-A95376/2020|20-10-19 1 +England/QEUH-B10460/2020|20-11-02 2 +Scotland/QEUH-96D5CD/2020|20-08-20 1 +England/CAMB-1AE7FF/2020|20-04-29 1 +England/CAMB-762D2/2020|20-03-28 7 +USA/WA-S1222/2020|MT821613.1|20-05-08 1 +USA/WA-S1655/2020|MT834136.1|20-05-29 3 +England/MILK-BB0F16/2020|20-11-17 1 +England/CAMC-BBDD4C/2020|20-11-22 1 +Scotland/EDB11342/2020|20-12-26 1 +England/QEUH-CAF17D/2020|20-12-15 1 +USA/CA-QDX-3684/2021|MW545275.1|21-01-08 1 +USA/CA-LACPHL-AE00058/2020|MW433754.1|20-07-13 1 +Scotland/QEUH-969725/2020|20-08-14 1 +England/QEUH-AD1648/2020|20-10-26 1 +England/MILK-A192C8/2020|20-10-01 1 +England/QEUH-9F3FDD/2020|20-09-24 1 +England/CAMC-1263B05/2021|21-02-10 1 +England/QEUH-AD3822/2020|20-10-26 1 +England/MILK-9A94E6/2020|20-09-01 1 +England/MILK-566C5A/2020|20-06-12 1 +England/CAMC-C2CDFC/2020|20-12-07 1 +England/MILK-CAA0EE/2020|20-12-18 1 +England/TFCI-26FA9B7/2020|20-12-31 1 +England/MILK-B94ACC/2020|20-11-13 1 +England/QEUH-96A29C/2020|20-08-13 1 +England/ALDP-9EA6D4/2020|20-09-24 1 +England/MILK-A6AEC4/2020|20-10-09 1 +England/MILK-B889A0/2020|20-11-14 1 +England/MILK-ACEE55/2020|20-10-21 1 +Switzerland/260079/2020|LR882418.1|20-08-25 1 +USA/WI-UW-1288/2020|MW035458.1|20-09-02 1 +USA/WA-S2808/2020|MW077495.1|20-08-31 1 +England/CAMC-B3582D/2020|20-11-05 1 +England/MILK-A796E8/2020|20-10-14 1 +England/MILK-BB0031/2020|20-11-18 1 +Scotland/QEUH-96B4E0/2020|20-08-17 1 +England/PHEC-152C73/2020|20-11-16 1 +England/MILK-9AA782/2020|20-08-31 1 +England/ALDP-B82A0D/2020|20-11-14 1 +USA/MD-MDH-0664/2021|MW524034.1|21-01-04 1 +England/MILK-A79D10/2020|20-10-15 2 +England/PHEC-148F95/2020|20-10-15 1 +England/MILK-A180DE/2020|20-10-01 1 +England/NORW-222D0F/2020|20-12-20 1 +England/MILK-F72F49/2021|21-01-05 1 +England/ALDP-94DD07/2020|20-06-19 1 +England/ALDP-49EC3C/2020|20-05-20 1 +PER/covper024/2020|MW030255.1|20-07-04 1 +PER/CoV-19_HRL-223/2020|MW185824.1|20-04-08 1 +PER/covper011/2020|MW030242.1|20-07-04 8 +PER/covper040/2020|MW030271.1|20-05-05 1 +England/MILK-B1553B/2020|20-10-23 1 +England/MILK-66F889/2020|20-07-03 5 +England/QEUH-96BAA2/2020|20-08-14 1 +Wales/ALDP-B19FFD/2020|20-11-01 1 +SRB/NS19622-16-06/2020|MW327528.1|20-06-15 1 +PER/covper018/2020|MW030249.1|20-07-03 7 +England/CAMC-C3E586/2020|20-12-10 1 +England/CAMC-DE5550/2020|20-12-29 1 +Japan/TKYE630414_2020/2020|LC593818.1|20-08 5