Mercurial > repos > iuc > varscan_mpileup

annotate test-data/varscan_copynumber_result2.interval @ 9:e3f170cc4f95 draft

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"planemo upload for repository https://github.com/galaxyproject/iuc/tree/master/tools/varscan commit fcf5ac14629c694f0f64773fab0428b1e78fe156"
author iuc
date Fri, 16 Aug 2019 15:50:25 -0400
parents 0bc800d67a0e
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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0bc800d67a0e planemo upload for repository https://github.com/galaxyproject/iuc/tree/master/tools/varscan commit 33c5694cb2e0a86a76d12a3355a2bd26deba7177
iuc
parents:
diff changeset
1 chrom chr_start chr_stop num_positions normal_depth tumor_depth log2_ratio gc_content
0bc800d67a0e planemo upload for repository https://github.com/galaxyproject/iuc/tree/master/tools/varscan commit 33c5694cb2e0a86a76d12a3355a2bd26deba7177
iuc
parents:
diff changeset
2 chr1 51436045 51436144 100 26.9 25.9 -0.052 51.0
0bc800d67a0e planemo upload for repository https://github.com/galaxyproject/iuc/tree/master/tools/varscan commit 33c5694cb2e0a86a76d12a3355a2bd26deba7177
iuc
parents:
diff changeset
3 chr1 51436145 51436214 70 27.6 30.3 0.134 45.7
0bc800d67a0e planemo upload for repository https://github.com/galaxyproject/iuc/tree/master/tools/varscan commit 33c5694cb2e0a86a76d12a3355a2bd26deba7177
iuc
parents:
diff changeset
4 chr1 51439427 51439526 100 31.1 29.3 -0.086 36.0
0bc800d67a0e planemo upload for repository https://github.com/galaxyproject/iuc/tree/master/tools/varscan commit 33c5694cb2e0a86a76d12a3355a2bd26deba7177
iuc
parents:
diff changeset
5 chr1 51439527 51439626 100 85.3 86.0 0.012 44.0
0bc800d67a0e planemo upload for repository https://github.com/galaxyproject/iuc/tree/master/tools/varscan commit 33c5694cb2e0a86a76d12a3355a2bd26deba7177
iuc
parents:
diff changeset
6 chr1 51439627 51439726 100 107.2 108.0 0.011 46.0
0bc800d67a0e planemo upload for repository https://github.com/galaxyproject/iuc/tree/master/tools/varscan commit 33c5694cb2e0a86a76d12a3355a2bd26deba7177
iuc
parents:
diff changeset
7 chr1 51439727 51439826 100 70.8 80.3 0.183 58.0
0bc800d67a0e planemo upload for repository https://github.com/galaxyproject/iuc/tree/master/tools/varscan commit 33c5694cb2e0a86a76d12a3355a2bd26deba7177
iuc
parents:
diff changeset
8 chr1 51439827 51439926 100 46.3 53.3 0.202 60.0
0bc800d67a0e planemo upload for repository https://github.com/galaxyproject/iuc/tree/master/tools/varscan commit 33c5694cb2e0a86a76d12a3355a2bd26deba7177
iuc
parents:
diff changeset
9 chr1 51439927 51439960 34 27.5 35.9 0.383 52.9