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comparison varvamp.xml @ 3:33fac436dd54 draft

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planemo upload for repository https://github.com/jonas-fuchs/varVAMP commit 1056d5cc83082613f5d92b22b4e531fa9d505b91
author iuc
date Wed, 08 May 2024 07:05:53 +0000
parents 80e18c0836e5
children 36c91ff33d70
comparison
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2:eb5dcbebd242 3:33fac436dd54
101 "gapopen": $mode.filter_blast_hits.blast_advanced_cond.blast_params.gapopen, 101 "gapopen": $mode.filter_blast_hits.blast_advanced_cond.blast_params.gapopen,
102 "gapextend": $mode.filter_blast_hits.blast_advanced_cond.blast_params.gapextend 102 "gapextend": $mode.filter_blast_hits.blast_advanced_cond.blast_params.gapextend
103 } 103 }
104 BLAST_MAX_DIFF = $mode.filter_blast_hits.blast_advanced_cond.blast_hits_usage.BLAST_MAX_DIFF 104 BLAST_MAX_DIFF = $mode.filter_blast_hits.blast_advanced_cond.blast_hits_usage.BLAST_MAX_DIFF
105 BLAST_SIZE_MULTI = $mode.filter_blast_hits.blast_advanced_cond.blast_hits_usage.BLAST_SIZE_MULTI 105 BLAST_SIZE_MULTI = $mode.filter_blast_hits.blast_advanced_cond.blast_hits_usage.BLAST_SIZE_MULTI
106 BLAST_PENALTY = $mode.filter_blast_hits.blast_advanced_cond.blast_hits_usage.BLAST_PENALTY
107 #end if 106 #end if
108 #end if 107 #end if
109 ]]></configfile> 108 ]]></configfile>
110 <configfile filename="dimers_fallback.tsv"><![CDATA[#set $line = '\t'.join(['pool', 'primer_name_1', 'primer_name_2', 'dimer melting temp']) 109 <configfile filename="dimers_fallback.tsv"><![CDATA[#set $line = '\t'.join(['pool', 'primer_name_1', 'primer_name_2', 'dimer melting temp'])
111 $line]]></configfile> 110 $line]]></configfile>