vcfanno: test-data/vcfanno_result.vcf annotate

annotate test-data/vcfanno_result.vcf @ 2:4f3c5e634679 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit b1be52deee49703c602af519df3515e6ae957167

author	iuc
date	Sun, 25 Feb 2024 18:11:24 +0000
parents	cdcaa40e5e45
children

rev	line source
0 fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	1 ##fileformat=VCFv4.1
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	2 ##contig=<ID=1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	3 ##contig=<ID=10>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	4 ##contig=<ID=11>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	5 ##contig=<ID=12>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	6 ##contig=<ID=13>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	7 ##contig=<ID=14>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	8 ##contig=<ID=15>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	9 ##contig=<ID=16>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	10 ##contig=<ID=17>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	11 ##contig=<ID=18>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	12 ##contig=<ID=19>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	13 ##contig=<ID=2>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	14 ##contig=<ID=20>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	15 ##contig=<ID=21>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	16 ##contig=<ID=22>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	17 ##contig=<ID=3>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	18 ##contig=<ID=4>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	19 ##contig=<ID=5>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	20 ##contig=<ID=6>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	21 ##contig=<ID=7>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	22 ##contig=<ID=8>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	23 ##contig=<ID=9>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	24 ##contig=<ID=GL000191.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	25 ##contig=<ID=GL000192.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	26 ##contig=<ID=GL000193.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	27 ##contig=<ID=GL000194.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	28 ##contig=<ID=GL000195.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	29 ##contig=<ID=GL000196.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	30 ##contig=<ID=GL000197.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	31 ##contig=<ID=GL000198.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	32 ##contig=<ID=GL000199.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	33 ##contig=<ID=GL000200.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	34 ##contig=<ID=GL000201.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	35 ##contig=<ID=GL000202.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	36 ##contig=<ID=GL000203.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	37 ##contig=<ID=GL000204.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	38 ##contig=<ID=GL000205.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	39 ##contig=<ID=GL000206.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	40 ##contig=<ID=GL000207.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	41 ##contig=<ID=GL000208.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	42 ##contig=<ID=GL000209.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	43 ##contig=<ID=GL000210.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	44 ##contig=<ID=GL000211.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	45 ##contig=<ID=GL000212.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	46 ##contig=<ID=GL000213.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	47 ##contig=<ID=GL000215.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	48 ##contig=<ID=GL000216.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	49 ##contig=<ID=GL000217.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	50 ##contig=<ID=GL000218.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	51 ##contig=<ID=GL000219.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	52 ##contig=<ID=GL000221.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	53 ##contig=<ID=GL000222.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	54 ##contig=<ID=GL000223.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	55 ##contig=<ID=GL000224.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	56 ##contig=<ID=GL000225.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	57 ##contig=<ID=GL000227.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	58 ##contig=<ID=GL000228.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	59 ##contig=<ID=GL000230.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	60 ##contig=<ID=GL000231.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	61 ##contig=<ID=GL000233.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	62 ##contig=<ID=GL000235.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	63 ##contig=<ID=GL000236.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	64 ##contig=<ID=GL000238.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	65 ##contig=<ID=GL000240.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	66 ##contig=<ID=GL000242.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	67 ##contig=<ID=GL000243.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	68 ##contig=<ID=GL000244.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	69 ##contig=<ID=GL000246.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	70 ##contig=<ID=GL000247.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	71 ##contig=<ID=GL000248.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	72 ##contig=<ID=GL000249.1>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	73 ##contig=<ID=MT>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	74 ##contig=<ID=X>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	75 ##contig=<ID=Y>
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	76 ##FILTER=<ID=PASS,Description="All filters passed">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	77 ##INFO=<ID=AB,Number=A,Type=Float,Description="Allele balance at heterozygous sites: a number between 0 and 1 representing the ratio of reads showing the reference allele to all reads, considering only reads from individuals called as heterozygous">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	78 ##INFO=<ID=ABP,Number=A,Type=Float,Description="Allele balance probability at heterozygous sites: Phred-scaled upper-bounds estimate of the probability of observing the deviation between ABR and ABA given E(ABR/ABA) ~ 0.5, derived using Hoeffding's inequality">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	79 ##INFO=<ID=AC,Number=A,Type=Integer,Description="Total number of alternate alleles in called genotypes">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	80 ##INFO=<ID=AC_AFR,Number=A,Type=Integer,Description="African/African American Allele Counts (from input_0.vcf.gz)">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	81 ##INFO=<ID=AC_AMR,Number=A,Type=Integer,Description="American Allele Counts (from input_0.vcf.gz)">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	82 ##INFO=<ID=AC_EAS,Number=A,Type=Integer,Description="East Asian Allele Counts (from input_0.vcf.gz)">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	83 ##INFO=<ID=AF,Number=A,Type=Float,Description="Estimated allele frequency in the range (0,1]">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	84 ##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	85 ##INFO=<ID=AO,Number=A,Type=Integer,Description="Alternate allele observations, with partial observations recorded fractionally">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	86 ##INFO=<ID=CIGAR,Number=A,Type=String,Description="The extended CIGAR representation of each alternate allele, with the exception that '=' is replaced by 'M' to ease VCF parsing. Note that INDEL alleles do not have the first matched base (which is provided by default, per the spec) referred to by the CIGAR.">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	87 ##INFO=<ID=CSQ,Number=.,Type=String,Description="Consequence type as predicted by VEP. Format: Consequence\|Codons\|Amino_acids\|Gene\|SYMBOL\|Feature\|EXON\|PolyPhen\|SIFT\|Protein_position\|BIOTYPE">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	88 ##INFO=<ID=DP,Number=1,Type=Integer,Description="Total read depth at the locus">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	89 ##INFO=<ID=DPB,Number=1,Type=Float,Description="Total read depth per bp at the locus; bases in reads overlapping / bases in haplotype">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	90 ##INFO=<ID=DPRA,Number=A,Type=Float,Description="Alternate allele depth ratio. Ratio between depth in samples with each called alternate allele and those without.">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	91 ##INFO=<ID=EFF,Number=.,Type=String,Description="Predicted effects for this variant.Format: 'Effect ( Effect_Impact \| Functional_Class \| Codon_Change \| Amino_Acid_Change\| Amino_Acid_length \| Gene_Name \| Transcript_BioType \| Gene_Coding \| Transcript_ID \| Exon_Rank \| Genotype_Number [ \| ERRORS \| WARNINGS ] )' ">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	92 ##INFO=<ID=EPP,Number=A,Type=Float,Description="End Placement Probability: Phred-scaled upper-bounds estimate of the probability of observing the deviation between EL and ER given E(EL/ER) ~ 0.5, derived using Hoeffding's inequality">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	93 ##INFO=<ID=EPPR,Number=1,Type=Float,Description="End Placement Probability for reference observations: Phred-scaled upper-bounds estimate of the probability of observing the deviation between EL and ER given E(EL/ER) ~ 0.5, derived using Hoeffding's inequality">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	94 ##INFO=<ID=GTI,Number=1,Type=Integer,Description="Number of genotyping iterations required to reach convergence or bailout.">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	95 ##INFO=<ID=ICIEND,Number=2,Type=Integer,Description="CIEND">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	96 ##INFO=<ID=ICIPOS,Number=2,Type=Integer,Description="CIPOS">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	97 ##INFO=<ID=ID,Number=1,Type=String,Description="calculated by first of overlapping values in field ID from input_0.vcf.gz">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	98 ##INFO=<ID=LEN,Number=A,Type=Integer,Description="allele length">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	99 ##INFO=<ID=MEANALT,Number=A,Type=Float,Description="Mean number of unique non-reference allele observations per sample with the corresponding alternate alleles.">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	100 ##INFO=<ID=MQM,Number=A,Type=Float,Description="Mean mapping quality of observed alternate alleles">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	101 ##INFO=<ID=MQMR,Number=1,Type=Float,Description="Mean mapping quality of observed reference alleles">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	102 ##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of samples with data">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	103 ##INFO=<ID=NUMALT,Number=1,Type=Integer,Description="Number of unique non-reference alleles in called genotypes at this position.">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	104 ##INFO=<ID=ODDS,Number=1,Type=Float,Description="The log odds ratio of the best genotype combination to the second-best.">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	105 ##INFO=<ID=OLD_MULTIALLELIC,Number=1,Type=String,Description="Original chr:pos:ref:alt encoding">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	106 ##INFO=<ID=OLD_VARIANT,Number=1,Type=String,Description="Original chr:pos:ref:alt encoding">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	107 ##INFO=<ID=PAIRED,Number=A,Type=Float,Description="Proportion of observed alternate alleles which are supported by properly paired read fragments">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	108 ##INFO=<ID=PAIREDR,Number=1,Type=Float,Description="Proportion of observed reference alleles which are supported by properly paired read fragments">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	109 ##INFO=<ID=PAO,Number=A,Type=Float,Description="Alternate allele observations, with partial observations recorded fractionally">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	110 ##INFO=<ID=PQA,Number=A,Type=Float,Description="Alternate allele quality sum in phred for partial observations">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	111 ##INFO=<ID=PQR,Number=1,Type=Float,Description="Reference allele quality sum in phred for partial observations">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	112 ##INFO=<ID=PRO,Number=1,Type=Float,Description="Reference allele observation count, with partial observations recorded fractionally">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	113 ##INFO=<ID=QA,Number=A,Type=Integer,Description="Alternate allele quality sum in phred">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	114 ##INFO=<ID=QR,Number=1,Type=Integer,Description="Reference allele quality sum in phred">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	115 ##INFO=<ID=RO,Number=1,Type=Integer,Description="Reference allele observation count, with partial observations recorded fractionally">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	116 ##INFO=<ID=RPP,Number=A,Type=Float,Description="Read Placement Probability: Phred-scaled upper-bounds estimate of the probability of observing the deviation between RPL and RPR given E(RPL/RPR) ~ 0.5, derived using Hoeffding's inequality">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	117 ##INFO=<ID=RPPR,Number=1,Type=Float,Description="Read Placement Probability for reference observations: Phred-scaled upper-bounds estimate of the probability of observing the deviation between RPL and RPR given E(RPL/RPR) ~ 0.5, derived using Hoeffding's inequality">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	118 ##INFO=<ID=RUN,Number=A,Type=Integer,Description="Run length: the number of consecutive repeats of the alternate allele in the reference genome">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	119 ##INFO=<ID=SAF,Number=A,Type=Integer,Description="Number of alternate observations on the forward strand">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	120 ##INFO=<ID=SAP,Number=A,Type=Float,Description="Strand balance probability for the alternate allele: Phred-scaled upper-bounds estimate of the probability of observing the deviation between SAF and SAR given E(SAF/SAR) ~ 0.5, derived using Hoeffding's inequality">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	121 ##INFO=<ID=SAR,Number=A,Type=Integer,Description="Number of alternate observations on the reverse strand">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	122 ##INFO=<ID=SRF,Number=1,Type=Integer,Description="Number of reference observations on the forward strand">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	123 ##INFO=<ID=SRP,Number=1,Type=Float,Description="Strand balance probability for the reference allele: Phred-scaled upper-bounds estimate of the probability of observing the deviation between SRF and SRR given E(SRF/SRR) ~ 0.5, derived using Hoeffding's inequality">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	124 ##INFO=<ID=SRR,Number=1,Type=Integer,Description="Number of reference observations on the reverse strand">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	125 ##INFO=<ID=TYPE,Number=A,Type=String,Description="The type of allele, either snp, mnp, ins, del, or complex.">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	126 ##INFO=<ID=coverage,Number=1,Type=Float,Description="calculated by sum of overlapping values in field coverage from input_1.bam">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	127 ##INFO=<ID=lua_end,Number=1,Type=String,Description="calculated by first of overlapping values in column 4 from input_2.bed.gz">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	128 ##INFO=<ID=lua_len,Number=1,Type=String,Description="calculated by first of overlapping values in column 4 from input_2.bed.gz">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	129 ##INFO=<ID=lua_loc,Number=1,Type=String,Description="calculated by first of overlapping values in column 4 from input_2.bed.gz">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	130 ##INFO=<ID=lua_mean,Number=1,Type=String,Description="calculated by first of overlapping values in column 4 from input_2.bed.gz">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	131 ##INFO=<ID=lua_start,Number=1,Type=String,Description="calculated by first of overlapping values in column 4 from input_2.bed.gz">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	132 ##INFO=<ID=mapq,Number=1,Type=Float,Description="calculated by mean of overlapping values in field mapq from input_1.bam">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	133 ##INFO=<ID=xdp2,Number=2,Type=Integer,Description="calculated by coverage from input_1.bam values are numbers of forward,reverse reads">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	134 ##FORMAT=<ID=AO,Number=A,Type=Integer,Description="Alternate allele observation count">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	135 ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	136 ##FORMAT=<ID=GL,Number=G,Type=Float,Description="Genotype Likelihood, log10-scaled likelihoods of the data given the called genotype for each possible genotype generated from the reference and alternate alleles given the sample ploidy">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	137 ##FORMAT=<ID=GQ,Number=1,Type=Float,Description="Genotype Quality, the Phred-scaled marginal (or unconditional) probability of the called genotype">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	138 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	139 ##FORMAT=<ID=QA,Number=A,Type=Integer,Description="Sum of quality of the alternate observations">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	140 ##FORMAT=<ID=QR,Number=1,Type=Integer,Description="Sum of quality of the reference observations">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	141 ##FORMAT=<ID=RO,Number=1,Type=Integer,Description="Reference allele observation count">
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	142 ##fileDate=20140830
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	143 ##source=freeBayes v0.9.14
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	144 ##reference=/shared/genomes/b37/full/human_g1k_v37.fasta
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	145 ##phasing=none
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	146 ##commandline="/mnt/thor_pool1/user_data/cc2qe/code/speedseq/bin/freebayes -f /shared/genomes/b37/full/human_g1k_v37.fasta --region MT:12136..12498 bam/NA12877_S1/NA12877_S1.bam bam/NA12878_S1/NA12878_S1.bam bam/NA12879_S1/NA12879_S1.bam bam/NA12880_S1/NA12880_S1.bam bam/NA12881_S1/NA12881_S1.bam bam/NA12882_S1/NA12882_S1.bam bam/NA12883_S1/NA12883_S1.bam bam/NA12884_S1/NA12884_S1.bam bam/NA12885_S1/NA12885_S1.bam bam/NA12886_S1/NA12886_S1.bam bam/NA12887_S1/NA12887_S1.bam bam/NA12888_S1/NA12888_S1.bam bam/NA12889_S1/NA12889_S1.bam bam/NA12890_S1/NA12890_S1.bam bam/NA12891_S1/NA12891_S1.bam bam/NA12892_S1/NA12892_S1.bam bam/NA12893_S1/NA12893_S1.bam"
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	147 ##VEP=v76 cache=/shared/external_bin/ensembl-tools-release-76/cache/homo_sapiens/76_GRCh37 db=.
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	148 ##SnpEffVersion="3.6c (build 2014-05-20), by Pablo Cingolani"
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	149 ##SnpEffCmd="SnpEff GRCh37.75 "
1 cdcaa40e5e45 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit c08085bc808613dd2b1a34d53e8366fafbda5ec7" iuc parents: 0 diff changeset	150 ##vcfanno=0.3.3
0 fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	151 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT NA12889 NA12890 NA12877
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	152 1 10492 . C T 3055.1 . AB=0.188084;ABP=726.385;AC=9;AF=0.264706;AN=34;AO=167;CIGAR=1X;TYPE=snp;mapq=55.5;coverage=12;xdp2=4,8 GT:DP:RO:QR:AO:QA:GL 0/0:117:117:3837:0:0:0,-10,-10 0/0:113:113:3758:0:0:0,-10,-10 0/0:132:132:4396:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	153 1 10583 . G A 1071.5 . AB=0.191964;ABP=372.238;AC=8;AF=0.235294;AN=34;AO=104;CIGAR=1X;TYPE=snp;mapq=52.6667;coverage=3;xdp2=1,2 GT:DP:RO:QR:AO:QA:GL 0/1:61:40:1252:20:580:-10,0,-10 0/0:57:51:1697:6:175:-6.44272,0,-10 0/0:64:56:1738:7:207:-8.6143,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	154 1 10616 . CCGCCGTTGCAAAGGCGCGCCG C 580.2 . AB=0.4375;ABP=3.55317;AC=31;AF=0.911765;AN=34;AO=54;CIGAR=1M21D1M;TYPE=del;mapq=21;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 1/1:2:0:0:2:35:-3.325,-0.60206,0 1/1:5:0:0:4:106:-9.744,-1.20412,0 1/1:9:0:0:9:208:-10,-2.70927,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	155 1 10623 . TGCAAAGGC CGCAAAG 580.2 . AB=0.375;ABP=5.18177;AC=3;AF=0.0882353;AN=34;AO=10;CIGAR=7M1X6M2D7M;TYPE=complex GT:DP:RO:QR:AO:QA:GL ./.:2:0:0:0:0:-3.325,-3.325,-3.325 ./.:5:0:0:0:0:-9.744,-9.744,-9.744 ./.:9:0:0:0:0:-10,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	156 1 10654 . G C 19.3 . AB=0.26087;ABP=14.4341;AC=2;AF=0.0588235;AN=34;AO=14;CIGAR=1X;TYPE=snp;mapq=21;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:10:10:273:0:0:0,-3.0103,-10 0/0:10:10:338:0:0:0,-3.0103,-10 0/0:20:19:610:1:7:0,-4.01957,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	157 1 10664 . C G 125.0 . AB=0.291667;ABP=30.1537;AC=5;AF=0.147059;AN=34;AO=32;CIGAR=1X;TYPE=snp;mapq=21;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:10:10:241:0:0:0,-3.0103,-10 0/0:9:9:308:0:0:0,-2.70927,-10 0/0:20:19:530:1:31:0,-1.61957,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	158 1 10665 . C G 717.5 . AB=0.406639;ABP=21.2561;AC=17;AF=0.5;AN=34;AO=98;CIGAR=1X;TYPE=snp;mapq=21;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/1:10:6:136:4:114:-9.85692,0,-10 0/1:9:4:139:5:139:-10,0,-10 0/1:20:13:390:7:147:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	159 1 10671 . G C 215.9 . AB=0.304878;ABP=30.1272;AC=7;AF=0.205882;AN=34;AO=33;CIGAR=1X;TYPE=snp;mapq=21;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:9:9:254:0:0:0,-2.70927,-10 0/0:6:6:163:0:0:0,-1.80618,-10 0/1:12:11:273:1:39:-1.36682,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	160 1 10683 . G C 244.6 . AB=0.3125;ABP=17.6677;AC=4;AF=0.117647;AN=34;AO=20;CIGAR=1X;TYPE=snp;mapq=21;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:8:8:264:0:0:0,-2.40824,-10 0/0:8:8:220:0:0:0,-2.40824,-10 0/0:11:11:324:0:0:0,-3.31133,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	161 1 10693 . C G 281.7 . AB=0.343284;ABP=17.3031;AC=6;AF=0.176471;AN=34;AO=31;CIGAR=1X;TYPE=snp;mapq=21;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:8:8:241:0:0:0,-2.40824,-10 0/0:8:8:236:0:0:0,-2.40824,-10 0/0:11:11:359:0:0:0,-3.31133,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	162 1 10694 . C G 1824.5 . AB=0.529412;ABP=4.41537;AC=17;AF=0.5;AN=34;AO=99;CIGAR=1X;TYPE=snp;mapq=21;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/1:8:4:93:4:132:-10,0,-8.03936 0/1:8:3:76:5:131:-10,0,-6.43328 0/1:11:4:131:7:213:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	163 1 10700 . G C 365.3 . AB=0.369863;ABP=13.7487;AC=7;AF=0.205882;AN=34;AO=31;CIGAR=1X;TYPE=snp;mapq=21;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:8:8:274:0:0:0,-2.40824,-10 0/0:9:9:291:0:0:0,-2.70927,-10 0/0:11:11:368:0:0:0,-3.31133,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	164 1 10712 . G C 121.1 . AB=0.305556;ABP=14.8328;AC=3;AF=0.0882353;AN=34;AO=17;CIGAR=1X;TYPE=snp;mapq=21;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:8:8:293:0:0:0,-2.40824,-10 0/0:9:9:318:0:0:0,-2.70927,-10 0/0:11:11:388:0:0:0,-3.31133,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	165 1 10722 . C G 230.0 . AB=0.311475;ABP=21.8416;AC=6;AF=0.176471;AN=34;AO=26;CIGAR=1X;TYPE=snp;mapq=21;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:5:5:184:0:0:0,-1.50515,-10 0/0:9:9:314:0:0:0,-2.70927,-10 0/0:10:10:347:0:0:0,-3.0103,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	166 1 10723 . C G 1706.7 . AB=0.516129;ABP=3.36054;AC=17;AF=0.5;AN=34;AO=80;CIGAR=1X;TYPE=snp;mapq=21;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/1:4:2:71:2:77:-6.88903,0,-6.31903 0/1:9:4:108:5:189:-10,0,-9.3811 0/1:9:4:141:5:175:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	167 1 10729 . G C 295.1 . AB=0.367347;ABP=10.4997;AC=6;AF=0.176471;AN=34;AO=21;CIGAR=1X;TYPE=snp;mapq=21;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:2:2:73:0:0:0,-0.60206,-6.935 0/0:8:8:270:0:0:0,-2.40824,-10 0/0:7:7:239:0:0:0,-2.10721,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	168 1 10741 . G C 120.7 . AB=0.409091;ABP=4.58955;AC=4;AF=0.125;AN=32;AO=10;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. 0/0:6:6:208:0:0:0,-1.80618,-10 0/0:4:4:139:0:0:0,-1.20412,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	169 1 17594 . C T 58.3 . AB=0.235294;ABP=13.3567;AC=1;AF=0.0294118;AN=34;AO=4;CIGAR=1X;TYPE=snp;mapq=40;coverage=7;xdp2=0,7 GT:DP:RO:QR:AO:QA:GL 0/0:26:26:916:0:0:0,-7.82678,-10 0/0:12:12:440:0:0:0,-3.61236,-10 0/0:18:18:610:0:0:0,-5.41854,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	170 1 17614 . G A 234.0 . AB=0.185567;ABP=86.3098;AC=4;AF=0.117647;AN=34;AO=20;CIGAR=1X;TYPE=snp;mapq=35.75;coverage=8;xdp2=0,8 GT:DP:RO:QR:AO:QA:GL 0/0:33:33:1181:0:0:0,-9.93399,-10 0/0:16:16:580:0:0:0,-4.81648,-10 0/0:23:23:811:0:0:0,-6.92369,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	171 1 17626 . G A 70.2 . AB=0.15625;ABP=68.6973;AC=3;AF=0.0882353;AN=34;AO=18;CIGAR=1X;TYPE=snp;mapq=35.1429;coverage=7;xdp2=0,7 GT:DP:RO:QR:AO:QA:GL 0/0:38:38:1359:0:0:0,-10,-10 0/0:20:20:716:0:0:0,-6.0206,-10 0/0:25:25:914:0:0:0,-7.52575,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	172 1 17697 . G C 195.1 . AB=0.164835;ABP=91.802;AC=2;AF=0.0588235;AN=34;AO=15;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:65:65:2215:0:0:0,-10,-10 0/1:46:40:1387:6:236:-10,0,-10 0/0:57:57:1918:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	173 1 17722 . A G 899.0 . AB=0.171429;ABP=265.572;AC=5;AF=0.147059;AN=34;AO=58;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:66:64:2340:2:80:0,-8.93655,-10 0/0:45:45:1703:0:0:0,-10,-10 0/0:63:63:2319:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	174 1 17730 . C A 575.3 . AB=0.166038;ABP=259.728;AC=5;AF=0.147059;AN=34;AO=53;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:68:65:2332:2:48:0,-10,-10 0/0:45:45:1693:0:0:0,-10,-10 0/0:62:62:2277:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	175 1 17746 . A G 3136.5 . AB=0.232172;ABP=378.711;AC=13;AF=0.382353;AN=34;AO=144;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:57:36:1275:21:779:-10,0,-10 0/1:39:32:1187:7:260:-10,0,-10 0/1:55:49:1802:6:224:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	176 1 17765 . G A 156.7 . AB=0.222222;ABP=33.1696;AC=1;AF=0.0294118;AN=34;AO=10;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:45:35:1233:10:329:-10,0,-10 0/0:36:36:1320:0:0:0,-10,-10 0/0:51:51:1811:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	177 1 18934 . C T 28.1 . AB=0.368421;ABP=5.8675;AC=5;AF=0.147059;AN=34;AO=9;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:7:5:138:2:65:-5.39001,0,-10 0/0:4:4:152:0:0:0,-1.20412,-10 0/0:5:4:153:1:30:-2.19382,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	178 1 19004 . A G 1577.9 . AB=0.565217;ABP=5.55942;AC=22;AF=0.6875;AN=32;AO=66;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:8:4:153:4:147:-10,0,-10 0/1:4:1:37:3:111:-9.75794,0,-3.09794 0/1:6:2:80:4:145:-10,0,-6.96991
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	179 1 19172 . A G 306.4 . AB=0.298851;ABP=33.5856;AC=10;AF=0.294118;AN=34;AO=31;CIGAR=1X;TYPE=snp;mapq=15;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:9:9:328:0:0:0,-2.70927,-10 0/1:4:3:111:1:31:-2.49794,0,-9.75794 0/0:13:12:431:1:34:-0.600553,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	180 1 19190 . GC G 2645.0 . AB=0.326923;ABP=97.7199;AC=17;AF=0.5;AN=34;AO=119;CIGAR=1M1D1M;TYPE=del;mapq=8;coverage=3;xdp2=1,2 GT:DP:RO:QR:AO:QA:GL 0/1:31:25:819:6:205:-10,0,-10 0/1:20:12:407:8:266:-10,0,-10 0/1:23:18:644:4:143:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	181 1 19322 . C T 683.2 . AB=0.386792;ABP=14.81;AC=12;AF=0.352941;AN=34;AO=43;CIGAR=1X;TYPE=snp;mapq=12;coverage=3;xdp2=2,1 GT:DP:RO:QR:AO:QA:GL 0/0:11:11:355:0:0:0,-3.31133,-10 0/1:7:4:111:3:101:-8.86352,0,-9.70436 0/1:20:12:386:8:211:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	182 1 19355 . G A 273.7 . AB=0.5;ABP=3.0103;AC=8;AF=0.25;AN=32;AO=20;CIGAR=1X;TYPE=snp;mapq=16;coverage=3;xdp2=0,3 GT:DP:RO:QR:AO:QA:GL 0/1:7:2:62:5:137:-10,0,-5.10501 0/1:4:2:71:2:53:-4.60903,0,-6.31903 0/1:6:4:131:2:61:-5.16491,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	183 1 19391 . G A 415.6 . AB=0.308642;ABP=28.7731;AC=8;AF=0.235294;AN=34;AO=29;CIGAR=1X;TYPE=snp;mapq=14.5;coverage=4;xdp2=0,4 GT:DP:RO:QR:AO:QA:GL 0/1:13:8:222:5:126:-10,0,-10 0/1:12:8:243:4:114:-9.62725,0,-10 0/1:13:9:272:4:124:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	184 1 19425 . A G 895.3 . AB=0.290456;ABP=94.924;AC=17;AF=0.5;AN=34;AO=70;CIGAR=1X;TYPE=snp;mapq=18;coverage=3;xdp2=0,3 GT:DP:RO:QR:AO:QA:GL 0/1:21:18:514:3:112:-7.25556,0,-10 0/1:13:8:298:5:172:-10,0,-10 0/1:29:23:763:4:57:-1.2948,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	185 1 19432 . A G 1157.1 . AB=0.298387;ABP=90.5697;AC=17;AF=0.5;AN=34;AO=74;CIGAR=1X;TYPE=snp;mapq=18;coverage=3;xdp2=0,3 GT:DP:RO:QR:AO:QA:GL 0/1:23:20:611:3:111:-6.68453,0,-10 0/1:14:10:359:4:145:-10,0,-10 0/1:29:24:843:5:113:-6.74078,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	186 1 19858 . C T 5330.3 . AB=0.321221;ABP=194.011;AC=17;AF=0.5;AN=34;AO=221;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:71:55:1892:16:563:-10,0,-10 0/1:38:20:709:18:676:-10,0,-10 0/1:58:40:1442:18:656:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	187 1 19865 . G T 1467.7 . AB=0.221184;ABP=219.758;AC=7;AF=0.205882;AN=34;AO=96;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:83:75:2673:8:277:-10,0,-10 0/1:45:37:1345:8:307:-10,0,-10 0/0:66:60:2142:6:213:-7.61539,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	188 1 19952 . G T 783.4 . AB=0.138462;ABP=519.587;AC=5;AF=0.147059;AN=34;AO=124;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:149:131:4603:18:645:-10,0,-10 0/0:94:89:3193:5:181:0,-3.90532,-10 0/1:91:71:2474:20:685:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	189 1 28247 . G A 97.4 . AB=0.75;ABP=5.18177;AC=7;AF=0.35;AN=20;AO=7;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. 0/0:1:1:40:0:0:0,-0.30103,-4 0/0:2:2:78:0:0:0,-0.60206,-7.41
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	190 1 28253 . G C 83.6 . AB=0.777778;ABP=9.04217;AC=5;AF=0.227273;AN=22;AO=7;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. 0/0:1:1:40:0:0:0,-0.30103,-4 0/1:2:0:0:2:81:-7.695,-0.60206,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	191 1 28326 . GT G 499.7 . AB=0.410714;ABP=6.88793;AC=15;AF=0.441176;AN=34;AO=28;CIGAR=1M1D1M;TYPE=del GT:DP:RO:QR:AO:QA:GL 0/1:5:2:80:3:110:-9.76152,0,-7.09485 0/0:3:3:116:0:0:0,-0.90309,-10 0/1:6:1:38:5:166:-10,0,-2.77197
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	192 1 28343 . G C 416.5 . AB=0.338983;ABP=16.2968;AC=14;AF=0.411765;AN=34;AO=24;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:6:3:119:3:118:-10,0,-10 0/0:3:3:114:0:0:0,-0.90309,-10 0/1:4:1:35:3:110:-9.66461,0,-2.89794
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	193 1 28354 . C T 367.0 . AB=0.316667;ABP=20.5268;AC=14;AF=0.411765;AN=34;AO=23;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:6:3:116:3:116:-10,0,-10 0/0:3:3:86:0:0:0,-0.90309,-8.02667 0/1:5:2:64:3:90:-7.89485,0,-5.57485
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	194 1 28367 . G A 44.3 . AB=0.25;ABP=22.5536;AC=7;AF=0.21875;AN=32;AO=9;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:5:5:190:0:0:0,-1.50515,-10 0/0:4:4:130:0:0:0,-1.20412,-10 0/0:4:4:131:0:0:0,-1.20412,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	195 1 28376 . G A 1645.1 . AB=0.571429;ABP=3.63072;AC=28;AF=0.875;AN=32;AO=60;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:4:1:41:3:113:-9.94461,0,-3.49794 0/1:4:2:43:2:71:-6.31903,0,-3.65903 0/1:2:1:41:1:31:-2.79897,0,-3.79897
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	196 1 28420 . A T 801.8 . AB=0.714286;ABP=5.80219;AC=17;AF=0.772727;AN=22;AO=33;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:2:2:72:0:0:0,-0.60206,-6.84 0/1:1:1:21:0:0:0,-0.30103,-2.1 0/1:1:1:35:0:0:0,-0.30103,-3.5
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	197 1 28494 . T C 518.0 . AB=0.483871;ABP=3.08035;AC=16;AF=0.533333;AN=30;AO=25;CIGAR=1X;TYPE=snp;mapq=13.6667;coverage=6;xdp2=6,0 GT:DP:RO:QR:AO:QA:GL 0/1:4:1:36:3:97:-8.45127,0,-2.99794 0/0:1:1:40:0:0:0,-0.30103,-4 1/1:4:0:0:4:137:-10,-1.20412,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	198 1 28501 . T C 213.1 . AB=0.341463;ABP=11.961;AC=8;AF=0.235294;AN=34;AO=14;CIGAR=1X;TYPE=snp;mapq=13.6667;coverage=6;xdp2=6,0 GT:DP:RO:QR:AO:QA:GL 0/0:5:5:164:0:0:0,-1.50515,-10 0/0:2:2:78:0:0:0,-0.60206,-7.41 0/0:6:6:210:0:0:0,-1.80618,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	199 1 28511 . G A 1185.0 . AB=0.528571;ABP=3.50664;AC=22;AF=0.647059;AN=34;AO=55;CIGAR=1X;TYPE=snp;mapq=13.6667;coverage=6;xdp2=6,0 GT:DP:RO:QR:AO:QA:GL 0/1:6:1:35:5:126:-10,0,-2.47197 0/1:2:1:41:1:41:-3.79897,0,-3.79897 1/1:6:0:0:6:208:-10,-1.80618,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	200 1 28558 . C T 1216.4 . AB=0.261905;ABP=85.7331;AC=19;AF=0.558824;AN=34;AO=56;CIGAR=1X;TYPE=snp;mapq=12;coverage=6;xdp2=2,4 GT:DP:RO:QR:AO:QA:GL 0/1:6:2:14:4:142:-10,0,-0.699911 0/1:6:5:157:1:40:-2.97197,0,-10 1/1:6:0:0:6:228:-10,-1.80618,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	201 1 28563 . A G 5576.5 . AB=0;ABP=0;AC=34;AF=1;AN=34;AO=184;CIGAR=1X;TYPE=snp;mapq=12;coverage=6;xdp2=2,4 GT:DP:RO:QR:AO:QA:GL 1/1:6:1:7:5:150:-10,-0.328029,0 1/1:7:1:10:6:220:-10,-0.262112,0 1/1:6:0:0:6:234:-10,-1.80618,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	202 1 28590 . T TTGG 219.5 . AB=0.269231;ABP=27.0635;AC=3;AF=0.0882353;AN=34;AO=16;CIGAR=1M3I1M;TYPE=ins;mapq=13.6667;coverage=6;xdp2=0,6 GT:DP:RO:QR:AO:QA:GL 0/0:7:7:247:0:0:0,-2.10721,-10 0/1:14:5:167:9:285:-10,0,-10 0/0:8:8:277:0:0:0,-2.40824,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	203 1 28628 . C T 52.5 . AB=0.327273;ABP=17.2631;AC=4;AF=0.142857;AN=28;AO=34;CIGAR=1X;TYPE=snp;mapq=14.6667;coverage=3;xdp2=0,3 GT:DP:RO:QR:AO:QA:GL 0/0:4:4:152:0:0:0,-1.20412,-10 0/0:12:11:332:1:7:0,-1.83318,-10 0/1:2:1:30:1:23:-1.99897,0,-2.69897
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	204 1 28663 . T A 779.4 . AB=0.642857;ABP=5.49198;AC=21;AF=0.807692;AN=26;AO=45;CIGAR=1X;TYPE=snp;mapq=16;coverage=2;xdp2=0,2 GT:DP:RO:QR:AO:QA:GL 0/1:1:1:39:0:0:0,-0.30103,-3.9 0/1:4:1:34:3:99:-8.63794,0,-2.79794 0/1:1:1:38:0:0:0,-0.30103,-3.8
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	205 1 28692 . CG AC 259.4 . AB=0;ABP=0;AC=14;AF=1;AN=14;AO=10;CIGAR=2X;TYPE=mnp GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. .:.:.:.:.:.:. .:.:.:.:.:.:.
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	206 1 28815 . G A 6.3 . AB=1;ABP=7.35324;AC=1;AF=0.0416667;AN=24;AO=3;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. 0/1:2:0:0:2:69:-6.555,-0.60206,0 0/0:2:2:66:0:0:0,-0.60206,-6.27
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	207 1 28835 . A G 851.4 . AB=0.8;ABP=6.91895;AC=17;AF=0.772727;AN=22;AO=35;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. .:.:.:.:.:.:. 0/1:1:1:35:0:0:0,-0.30103,-3.5
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	208 1 28875 . G A 27.4 . AB=1;ABP=11.6962;AC=2;AF=0.0666667;AN=30;AO=5;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. 0/1:3:0:0:3:105:-9.8,-0.90309,0 0/0:2:2:69:0:0:0,-0.60206,-6.555
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	209 1 28905 . C A 192.0 . AB=0.5;ABP=3.0103;AC=6;AF=0.1875;AN=32;AO=12;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. 0/0:4:4:131:0:0:0,-1.20412,-10 0/0:3:3:100:0:0:0,-0.90309,-9.33333
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	210 1 28959 . A C 173.7 . AB=0.34375;ABP=9.79615;AC=6;AF=0.1875;AN=32;AO=13;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:5:5:183:0:0:0,-1.50515,-10 0/1:8:4:153:4:145:-10,0,-10 0/0:6:6:171:0:0:0,-1.80618,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	211 1 29443 . A G 126.2 . AB=0;ABP=0;AC=14;AF=1;AN=14;AO=8;CIGAR=1X;TYPE=snp;mapq=18;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. .:.:.:.:.:.:. .:.:.:.:.:.:.
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	212 1 29571 . G C 163.7 . AB=0.268293;ABP=22.1298;AC=5;AF=0.147059;AN=34;AO=14;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:11:9:284:2:72:-5.26903,0,-10 0/0:15:15:441:0:0:0,-4.51545,-10 0/0:9:9:303:0:0:0,-2.70927,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	213 1 30528 . C T 98.0 . AB=0.321429;ABP=10.7656;AC=8;AF=0.235294;AN=34;AO=10;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:2:1:41:1:41:-3.79897,0,-3.79897 0/0:2:2:78:0:0:0,-0.60206,-7.41 0/1:5:3:103:2:68:-5.95485,0,-9.10818
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	214 1 30548 . T G 489.0 . AB=0.539683;ABP=3.872;AC=18;AF=0.529412;AN=34;AO=45;CIGAR=1X3M;TYPE=snp;AC_AFR=0;AC_AMR=0;AC_EAS=0 GT:DP:RO:QR:AO:QA:GL 0/1:3:1:40:2:51:-4.41903,0,-3.57403 0/1:3:1:40:2:34:-2.80403,0,-3.57403 0/1:9:5:186:2:51:-3.75251,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	215 1 30779 . T C 6.8 . AB=0.4;ABP=3.44459;AC=1;AF=0.0294118;AN=34;AO=2;CIGAR=1X;TYPE=snp;mapq=16.6667;coverage=3;xdp2=3,0 GT:DP:RO:QR:AO:QA:GL 0/0:1:1:35:0:0:0,-0.30103,-3.5 0/1:5:3:113:2:73:-6.42985,0,-10 0/0:3:3:112:0:0:0,-0.90309,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	216 1 30860 . G C 1261.2 . AB=0.178733;ABP=399.26;AC=10;AF=0.294118;AN=34;AO=104;CIGAR=1X;TYPE=snp;mapq=14;coverage=4;xdp2=1,3 GT:DP:RO:QR:AO:QA:GL 0/0:36:32:1047:4:94:-2.62807,0,-10 0/0:28:26:826:2:49:0,-1.19635,-10 0/1:51:41:1342:10:328:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	217 1 30923 . G T 9831.3 . AB=0;ABP=0;AC=34;AF=1;AN=34;AO=341;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 1/1:21:0:0:20:699:-10,-6.0206,0 1/1:10:0:0:10:356:-10,-3.0103,0 1/1:23:0:0:23:836:-10,-6.92369,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	218 1 31029 . G A 1422.4 . AB=0.469565;ABP=3.93554;AC=20;AF=0.588235;AN=34;AO=66;CIGAR=1X;TYPE=snp;mapq=5;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/1:11:9:319:2:68:-4.88903,0,-10 0/1:7:6:232:1:39:-2.63789,0,-10 0/1:15:7:259:8:274:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	219 1 31166 . C T 108.4 . AB=0.22449;ABP=35.3165;AC=6;AF=0.176471;AN=34;AO=16;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:7:7:262:0:0:0,-2.10721,-10 0/1:6:5:189:1:41:-3.07197,0,-10 0/0:9:8:313:1:39:-2.14497,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	220 1 33430 . A T 1.3 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. .:.:.:.:.:.:. .:.:.:.:.:.:.
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	221 1 39015 . A C 1688.4 . AB=0.367568;ABP=31.1925;AC=13;AF=0.382353;AN=34;AO=70;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:21:18:650:3:114:-7.44222,0,-10 0/1:21:9:281:12:468:-10,0,-10 0/1:14:10:341:4:130:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	222 1 39185 . T C 33.6 . AB=0.179487;ABP=37.8095;AC=2;AF=0.0588235;AN=34;AO=25;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:30:29:1036:1:37:0,-3.85378,-10 0/1:16:12:435:4:136:-10,0,-10 0/0:29:29:961:0:0:0,-8.72987,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	223 1 39230 . G A 5254.8 . AB=0.336554;ABP=147.107;AC=15;AF=0.441176;AN=34;AO=210;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:58:38:1374:20:682:-10,0,-10 0/0:45:44:1552:1:37:0,-8.19314,-10 0/1:46:24:835:22:661:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	224 1 39247 . A G 2079.6 . AB=0.209677;ABP=320.746;AC=10;AF=0.294118;AN=34;AO=98;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:52:44:1616:8:296:-10,0,-10 0/1:43:32:1195:11:355:-10,0,-10 0/1:41:30:1061:11:396:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	225 1 39255 . A C 5317.3 . AB=0.355422;ABP=93.4273;AC=13;AF=0.382353;AN=34;AO=178;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:49:33:1284:16:598:-10,0,-10 0/1:44:32:1225:12:409:-10,0,-10 0/0:41:41:1461:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	226 1 39256 . A G 1801.7 . AB=0.175097;ABP=474.296;AC=14;AF=0.411765;AN=34;AO=100;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:48:41:1500:7:271:-10,0,-10 0/1:44:38:1364:6:227:-10,0,-10 0/0:43:38:1321:5:164:-8.12716,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	227 1 39261 . T C 12137.2 . AB=0.670157;ABP=147.112;AC=18;AF=0.529412;AN=34;AO=424;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:46:12:438:34:1166:-10,0,-10 0/1:43:22:756:21:704:-10,0,-10 0/1:42:25:907:17:584:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	228 1 39406 . G C 698.1 . AB=0.235669;ABP=98.2923;AC=9;AF=0.264706;AN=34;AO=47;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:28:26:977:2:74:-1.17865,0,-10 0/1:8:4:143:4:154:-10,0,-10 0/0:16:15:558:1:40:-0.38764,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	229 1 39423 . T C 67.6 . AB=0.21875;ABP=24.9965;AC=2;AF=0.0588235;AN=34;AO=12;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:39:39:1463:0:0:0,-10,-10 0/0:13:13:477:0:0:0,-3.91339,-10 0/0:21:21:763:0:0:0,-6.32163,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	230 1 40639 . CTTT C 650.3 . AB=0.626556;ABP=36.5375;AC=23;AF=0.676471;AN=34;AO=229;CIGAR=1M3D17M;TYPE=del;mapq=6.5;coverage=4;xdp2=2,2 GT:DP:RO:QR:AO:QA:GL 1/1:8:0:0:6:36:-3.16125,-1.80618,0 0/1:15:5:184:7:49:-3.6987,0,-10 0/1:17:4:126:12:82:-5.84051,0,-9.99559
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	231 1 40894 . G AA 2480.0 . AB=0.67;ABP=28.1125;AC=21;AF=0.617647;AN=34;AO=91;CIGAR=1M1I1X;TYPE=complex GT:DP:RO:QR:AO:QA:GL 0/1:2:2:54:0:0:0,-0.60206,-5.13 0/1:6:3:115:3:112:-9.94818,0,-10 0/1:7:2:68:5:183:-10,0,-5.67501
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	232 1 46320 . A G 27.2 . AB=0.666667;ABP=3.73412;AC=1;AF=0.125;AN=8;AO=2;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:3:1:39:2:82:-7.36403,0,-3.47403 .:.:.:.:.:.:. 0/0:1:1:38:0:0:0,-0.30103,-3.8
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	233 1 47267 . T G 645.8 . AB=0.305882;ABP=30.8307;AC=1;AF=0.0357143;AN=28;AO=26;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:85:59:2191:26:889:-10,0,-10 .:.:.:.:.:.:. 0/0:33:33:1170:0:0:0,-9.93399,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	234 1 47960 . T A 2823.7 . AB=0.482143;ABP=3.47562;AC=16;AF=0.470588;AN=34;AO=99;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:21:21:767:0:0:0,-6.32163,-10 1/1:3:0:0:3:112:-10,-0.90309,0 0/1:19:11:420:8:314:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	235 1 48127 . T C 332.8 . AB=0.28;ABP=24.0302;AC=1;AF=0.0294118;AN=34;AO=14;CIGAR=1X;TYPE=snp;mapq=25;coverage=6;xdp2=3,3 GT:DP:RO:QR:AO:QA:GL 0/1:50:36:1360:14:508:-10,0,-10 0/0:10:10:364:0:0:0,-3.0103,-10 0/0:33:33:1242:0:0:0,-9.93399,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	236 1 48448 . C T 1564.1 . AB=0.506329;ABP=3.03779;AC=15;AF=0.441176;AN=34;AO=58;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:21:21:752:0:0:0,-6.32163,-10 0/1:8:1:38:7:258:-10,0,-2.29485 0/0:7:7:239:0:0:0,-2.10721,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	237 1 49243 . G A 116.6 . AB=1;ABP=33.4109;AC=5;AF=0.178571;AN=28;AO=24;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:61:61:2236:0:0:0,-10,-10 0/1:2:0:0:2:68:-6.46,-0.60206,0 0/0:23:21:794:2:70:-2.12943,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	238 1 49291 . C T 131.4 . AB=0.354839;ABP=8.68415;AC=3;AF=0.09375;AN=32;AO=18;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:57:57:2053:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:22:22:799:0:0:0,-6.62266,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	239 1 49298 . T C 6036.0 . AB=0.75;ABP=18.2106;AC=24;AF=0.75;AN=32;AO=203;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 1/1:54:2:72:52:1850:-10,-6.25998,0 .:.:.:.:.:.:. 1/1:22:2:73:20:743:-10,0,-2.67595
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	240 1 49404 . C A 559.5 . AB=0.313131;ABP=33.038;AC=7;AF=0.205882;AN=34;AO=31;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:33:33:1195:0:0:0,-9.93399,-10 0/1:4:0:0:4:106:-9.805,-1.20412,0 0/1:14:11:397:3:115:-9.08001,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	241 1 49427 . C T 225.6 . AB=0.212121;ABP=74.2741;AC=7;AF=0.205882;AN=34;AO=24;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:38:37:1283:1:35:0,-6.35936,-10 0/1:5:3:87:2:69:-6.04985,0,-7.61485 0/1:13:11:404:2:60:-3.6787,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	242 1 49448 . A G 1074.9 . AB=0.284211;ABP=79.8576;AC=11;AF=0.323529;AN=34;AO=57;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:52:52:1775:0:0:0,-10,-10 0/1:8:2:69:6:183:-10,0,-5.59392 0/0:15:14:509:1:36:-0.260641,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	243 1 49514 . AG A 278.8 . AB=0.15873;ABP=66.7413;AC=2;AF=0.0625;AN=32;AO=19;CIGAR=1M1D1M;TYPE=del GT:DP:RO:QR:AO:QA:GL 0/0:87:87:3244:0:0:0,-10,-10 0/1:4:0:0:3:121:-10,-0.90309,0 0/0:25:23:856:1:35:0,-2.64451,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	244 1 49515 . G GA 278.8 . AB=0.294118;ABP=28.0461;AC=6;AF=0.1875;AN=32;AO=20;CIGAR=2M1I1M;TYPE=ins GT:DP:RO:QR:AO:QA:GL 0/0:87:87:3244:0:0:0,-10,-10 0/.:4:0:0:0:0:-10,-10,-10 0/0:25:23:856:0:0:0,-6.92369,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	245 1 49554 . A G 465.0 . AB=0.3;ABP=23.8564;AC=2;AF=0.0666667;AN=30;AO=18;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:60:42:1605:18:665:-10,0,-10 .:.:.:.:.:.:. 0/0:14:14:518:0:0:0,-4.21442,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	246 1 50299 . CA C 797.8 . AB=0.280822;ABP=63.9305;AC=13;AF=0.382353;AN=34;AO=41;CIGAR=1M1D1M;TYPE=del GT:DP:RO:QR:AO:QA:GL 0/1:17:14:522:3:115:-8.44833,0,-10 0/1:7:5:192:2:77:-6.53001,0,-10 0/1:9:7:236:2:73:-5.78203,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	247 1 51476 . T C 17.4 . AB=0.625;ABP=4.09604;AC=2;AF=0.0714286;AN=28;AO=11;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:80:80:2829:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:29:28:945:0:0:0,-8.42884,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	248 1 51479 . T A 583.4 . AB=0;ABP=0;AC=2;AF=0.0666667;AN=30;AO=22;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:79:79:2959:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:29:29:1028:0:0:0,-8.72987,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	249 1 51587 . C T 13.0 . AB=0.3;ABP=9.95901;AC=3;AF=0.0882353;AN=34;AO=8;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:40:40:1410:0:0:0,-10,-10 0/0:2:2:64:0:0:0,-0.60206,-6.08 0/0:16:16:529:0:0:0,-4.81648,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	250 1 51668 . C A 480.4 . AB=0.452055;ABP=4.46786;AC=7;AF=0.205882;AN=34;AO=35;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:78:78:2448:0:0:0,-10,-10 0/0:9:9:323:0:0:0,-2.70927,-10 0/0:47:47:1571:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	251 1 51673 . T C 525.9 . AB=0.45;ABP=4.74748;AC=8;AF=0.235294;AN=34;AO=39;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:78:76:2335:2:13:0,-10,-10 0/0:9:9:325:0:0:0,-2.70927,-10 0/0:48:48:1533:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	252 1 51803 . T C 2171.2 . AB=0.651852;ABP=30.0492;AC=10;AF=0.294118;AN=34;AO=89;CIGAR=1X;TYPE=snp;mapq=25;coverage=1;xdp2=1,0 GT:DP:RO:QR:AO:QA:GL 0/1:40:12:365:26:848:-10,0,-10 0/1:1:1:39:0:0:0,-0.30103,-3.9 0/1:10:2:68:8:228:-10,0,-5.10291
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	253 1 51898 . C A 912.0 . AB=0.234818;ABP=153.879;AC=10;AF=0.294118;AN=34;AO=64;CIGAR=1X;TYPE=snp;mapq=25;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:90:90:3105:0:0:0,-10,-10 0/1:5:0:0:5:156:-10,-1.50515,0 0/0:35:32:1060:3:60:0,-1.12014,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	254 1 51928 . G A 2893.1 . AB=0.288557;ABP=159.119;AC=13;AF=0.382353;AN=34;AO=117;CIGAR=1X;TYPE=snp;mapq=25;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:98:97:3437:1:19:0,-10,-10 0/1:8:0:0:8:268:-10,-2.40824,0 0/1:40:33:1190:7:207:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	255 1 52058 . G C 1329.4 . AB=0.369128;ABP=25.1768;AC=16;AF=0.470588;AN=34;AO=83;CIGAR=1X;TYPE=snp;mapq=32.5;coverage=2;xdp2=2,0 GT:DP:RO:QR:AO:QA:GL 0/0:72:72:2488:0:0:0,-10,-10 0/1:3:0:0:3:101:-9.42667,-0.90309,0 0/0:24:22:747:2:82:-3.00619,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	256 1 52091 . A C 75.4 . AB=0.319149;ABP=69.7715;AC=7;AF=0.205882;AN=34;AO=121;CIGAR=1X;TYPE=snp;mapq=24;coverage=3;xdp2=2,1 GT:DP:RO:QR:AO:QA:GL 0/1:67:48:1443:17:138:-8.13888,0,-10 0/0:7:6:225:1:6:0,-0.662112,-10 0/0:31:23:629:7:54:-2.15284,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	257 1 52093 . TCCA CCCC 162.9 . AB=0.170543;ABP=246.249;AC=2;AF=0.0588235;AN=34;AO=67;CIGAR=1X2M1X;TYPE=complex;mapq=20;coverage=4;xdp2=2,2 GT:DP:RO:QR:AO:QA:GL 0/.:69:42:1496:8:63:-10,-10,-10 0/0:8:8:285:0:0:0,-2.40824,-10 0/.:31:16:571:6:74:-8.13985,-3.22658,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	258 1 52096 . A C 162.9 . AB=0.236434;ABP=158.683;AC=5;AF=0.147059;AN=34;AO=83;CIGAR=3M1X;TYPE=snp;mapq=20;coverage=4;xdp2=2,2 GT:DP:RO:QR:AO:QA:GL 0/1:69:42:1496:18:175:-10,0,-10 0/0:8:8:285:0:0:0,-2.40824,-10 0/1:31:16:571:9:104:-8.13985,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	259 1 52238 . T G 11802.2 . AB=0;ABP=0;AC=32;AF=1;AN=32;AO=365;CIGAR=1X;TYPE=snp;mapq=27;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 1/1:48:0:0:48:1840:-10,-10,0 1/1:13:0:0:13:491:-10,-3.91339,0 1/1:35:0:0:35:1313:-10,-10,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	260 1 53920 . G C 183.6 . AB=0.285714;ABP=14.1779;AC=1;AF=0.0294118;AN=34;AO=8;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:28:20:748:8:316:-10,0,-10 0/0:2:2:70:0:0:0,-0.60206,-6.65 0/0:17:17:633:0:0:0,-5.11751,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	261 1 54001 . A G 780.9 . AB=0.294872;ABP=60.0254;AC=10;AF=0.3125;AN=32;AO=48;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:49:49:1856:0:0:0,-10,-10 0/1:5:0:0:5:189:-10,-1.50515,0 0/1:20:16:610:4:153:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	262 1 54366 . A G 78.1 . AB=1;ABP=18.2106;AC=2;AF=0.0588235;AN=34;AO=25;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:98:98:3615:0:0:0,-10,-10 0/0:1:0:0:1:41:-4.1,-0.30103,0 0/0:28:26:966:2:73:-1.08365,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	263 1 54380 . T C 79.9 . AB=1;ABP=18.2106;AC=2;AF=0.0588235;AN=34;AO=17;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:106:106:3952:0:0:0,-10,-10 0/1:2:0:0:2:82:-7.79,-0.60206,0 0/0:24:23:863:1:31:0,-2.74451,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	264 1 54490 . G A 686.7 . AB=0.5;ABP=3.0103;AC=1;AF=0.0294118;AN=34;AO=23;CIGAR=1X;TYPE=snp;mapq=7;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:88:88:3211:0:0:0,-10,-10 0/0:17:17:659:0:0:0,-5.11751,-10 0/0:46:46:1731:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	265 1 54586 . T C 1657.2 . AB=0.269504;ABP=133.145;AC=11;AF=0.323529;AN=34;AO=82;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:87:87:3136:0:0:0,-10,-10 0/1:6:0:0:6:217:-10,-1.80618,0 0/1:29:24:876:5:186:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	266 1 54676 . C T 3057.6 . AB=0.373802;ABP=46.3079;AC=11;AF=0.323529;AN=34;AO=123;CIGAR=1X;TYPE=snp;mapq=33.5;coverage=2;xdp2=2,0 GT:DP:RO:QR:AO:QA:GL 0/0:89:89:3000:0:0:0,-10,-10 0/1:5:0:0:5:183:-10,-1.50515,0 0/1:37:25:902:12:445:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	267 1 54708 . GTATTTTTC CTATTTTTTT 3037.9 . AB=0.340517;ABP=54.2645;AC=7;AF=0.205882;AN=34;AO=79;CIGAR=1X2M1I5M1X;TYPE=complex;mapq=49;coverage=3;xdp2=2,1 GT:DP:RO:QR:AO:QA:GL 0/0:65:62:2240:0:0:0,-10,-10 0/.:8:0:0:0:0:-10,-10,-10 0/.:38:23:851:0:0:-10,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	268 1 54708 . GTATTTTTC CTATTTTTT 3037.9 . AB=0.321138;ABP=71.3675;AC=6;AF=0.176471;AN=34;AO=79;CIGAR=1X7M1X;TYPE=complex;mapq=49;coverage=3;xdp2=2,1 GT:DP:RO:QR:AO:QA:GL 0/0:65:62:2240:0:0:0,-10,-10 0/1:8:0:0:8:196:-10,-2.40824,0 0/1:38:23:851:14:479:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	269 1 54720 . CT C 745.3 . AB=0.553191;ABP=4.16534;AC=1;AF=0.0294118;AN=34;AO=26;CIGAR=1M1D1M;TYPE=del;mapq=49;coverage=3;xdp2=2,1 GT:DP:RO:QR:AO:QA:GL 0/0:80:78:2824:0:0:0,-10,-10 0/0:12:12:446:0:0:0,-3.61236,-10 0/0:48:48:1769:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	270 1 54724 . C CTT 583.3 . AB=0.15869;ABP=404.711;AC=9;AF=0.264706;AN=34;AO=71;CIGAR=1M2I3M;TYPE=ins;mapq=49;coverage=3;xdp2=2,1 GT:DP:RO:QR:AO:QA:GL 0/0:79:78:2836:0:0:0,-10,-10 0/0:14:9:344:3:102:-7.91006,0,-10 0/1:51:40:1473:8:288:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	271 1 54760 . C CTT 121.0 . AB=0.152;ABP=134.497;AC=3;AF=0.0882353;AN=34;AO=34;CIGAR=1M2I3M;TYPE=ins;mapq=39.75;coverage=4;xdp2=2,2 GT:DP:RO:QR:AO:QA:GL 0/0:66:66:2384:0:0:0,-10,-10 0/1:19:14:521:5:126:-9.93794,0,-10 0/1:54:46:1699:7:223:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	272 1 54844 . G A 3279.5 . AB=0.381323;ABP=34.4502;AC=15;AF=0.441176;AN=34;AO=115;CIGAR=1X;TYPE=snp;mapq=24;coverage=4;xdp2=2,2 GT:DP:RO:QR:AO:QA:GL 0/0:64:64:2268:0:0:0,-10,-10 0/1:2:0:0:2:73:-6.935,-0.60206,0 0/1:17:10:379:7:220:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	273 1 54933 . C G 251.6 . AB=0.3125;ABP=12.7819;AC=1;AF=0.0294118;AN=34;AO=10;CIGAR=1X;TYPE=snp;mapq=22;coverage=2;xdp2=0,2 GT:DP:RO:QR:AO:QA:GL 0/1:32:22:796:10:377:-10,0,-10 0/0:11:11:425:0:0:0,-3.31133,-10 0/0:22:22:827:0:0:0,-6.62266,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	274 1 55085 . T A 3143.9 . AB=0.289809;ABP=123.506;AC=15;AF=0.441176;AN=34;AO=115;CIGAR=1X;TYPE=snp;mapq=22.6;coverage=5;xdp2=3,2 GT:DP:RO:QR:AO:QA:GL 0/0:70:70:2691:0:0:0,-10,-10 1/1:12:0:0:12:471:-10,-3.61236,0 0/1:24:20:779:4:140:-9.75165,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	275 1 55164 . C A 8121.5 . AB=0;ABP=0;AC=32;AF=1;AN=32;AO=251;CIGAR=1X;TYPE=snp;mapq=23;coverage=3;xdp2=0,3 GT:DP:RO:QR:AO:QA:GL 1/1:44:0:0:44:1661:-10,-10,0 .:.:.:.:.:.:. 1/1:13:0:0:13:495:-10,-3.91339,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	276 1 55299 . C T 8698.7 . AB=0.385057;ABP=22.9779;AC=16;AF=0.571429;AN=28;AO=273;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:102:72:2565:30:1111:-10,0,-10 .:.:.:.:.:.:. 0/0:28:28:1058:0:0:0,-8.42884,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	277 1 55326 . T C 7649.7 . AB=0.538462;ABP=3.84548;AC=15;AF=0.535714;AN=28;AO=237;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:106:106:3890:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:33:33:1254:0:0:0,-9.93399,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	278 1 55545 . C T 4360.5 . AB=0.283951;ABP=68.6906;AC=15;AF=0.535714;AN=28;AO=149;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:94:77:2848:17:590:-10,0,-10 .:.:.:.:.:.:. 0/0:21:21:751:0:0:0,-6.32163,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	279 1 55926 . T C 3730.9 . AB=0;ABP=0;AC=28;AF=1;AN=28;AO=121;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 1/1:21:0:0:21:737:-10,-6.32163,0 .:.:.:.:.:.:. 1/1:3:0:0:3:106:-9.89333,-0.90309,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	280 1 56799 . T C 633.8 . AB=0.204545;ABP=169.819;AC=10;AF=0.294118;AN=34;AO=53;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:81:81:3014:0:0:0,-10,-10 0/1:2:0:0:2:81:-7.695,-0.60206,0 0/1:27:23:811:4:151:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	281 1 57033 . T C 111.4 . AB=0.275862;ABP=15.6647;AC=1;AF=0.0294118;AN=34;AO=27;CIGAR=1X;TYPE=snp;mapq=29.7143;coverage=7;xdp2=2,5 GT:DP:RO:QR:AO:QA:GL 0/0:89:89:3249:0:0:0,-10,-10 0/0:13:13:451:0:0:0,-3.91339,-10 0/0:57:57:2068:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	282 1 57158 . G C 5444.2 . AB=0.747126;ABP=95.3104;AC=11;AF=0.323529;AN=34;AO=175;CIGAR=1X;TYPE=snp;mapq=40;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:68:68:2501:0:0:0,-10,-10 0/1:2:2:80:0:0:0,-0.60206,-7.6 0/0:33:33:1275:0:0:0,-9.93399,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	283 1 57246 . C G 1279.9 . AB=0.209091;ABP=245.584;AC=11;AF=0.323529;AN=34;AO=76;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:90:90:3397:0:0:0,-10,-10 0/1:3:0:0:3:121:-10,-0.90309,0 0/0:33:30:1086:3:112:-4.25622,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	284 1 57292 . C T 6195.9 . AB=0.728261;ABP=86.2815;AC=12;AF=0.375;AN=32;AO=198;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:73:73:2759:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:25:25:967:0:0:0,-7.52575,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	285 1 57376 . C T 69.2 . AB=0.158537;ABP=86.0559;AC=4;AF=0.117647;AN=34;AO=23;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:72:72:2529:0:0:0,-10,-10 0/0:2:0:0:2:49:-4.655,-0.60206,0 0/1:27:24:892:3:108:-5.41832,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	286 1 57856 . T A 5432.2 . AB=0.361979;ABP=66.5485;AC=16;AF=0.470588;AN=34;AO=179;CIGAR=1X;TYPE=snp;mapq=47;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:64:64:2407:0:0:0,-10,-10 1/1:10:0:0:10:378:-10,-3.0103,0 0/1:25:13:496:12:443:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	287 1 57952 . A C 3032.5 . AB=0;ABP=0;AC=28;AF=1;AN=28;AO=104;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 1/1:18:0:0:18:670:-10,-5.41854,0 .:.:.:.:.:.:. 1/1:6:0:0:6:200:-10,-1.80618,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	288 1 58176 . G A 241.5 . AB=0.4;ABP=5.18177;AC=1;AF=0.0294118;AN=34;AO=10;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:25:15:520:10:374:-10,0,-10 0/0:4:4:137:0:0:0,-1.20412,-10 0/0:15:15:541:0:0:0,-4.51545,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	289 1 58193 . G A 124.8 . AB=0.291667;ABP=12.0581;AC=1;AF=0.0294118;AN=34;AO=7;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:24:17:618:7:227:-10,0,-10 0/0:3:3:97:0:0:0,-0.90309,-9.05333 0/0:14:14:490:0:0:0,-4.21442,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	290 1 58211 . A G 4531.5 . AB=0;ABP=0;AC=34;AF=1;AN=34;AO=149;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 1/1:24:0:0:24:868:-10,-7.22472,0 1/1:2:0:0:2:59:-5.605,-0.60206,0 1/1:15:0:0:15:524:-10,-4.51545,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	291 1 58771 . T C 7453.7 . AB=0.474074;ABP=5.37479;AC=16;AF=0.470588;AN=34;AO=243;CIGAR=1X;TYPE=snp;mapq=32.3333;coverage=3;xdp2=3,0 GT:DP:RO:QR:AO:QA:GL 0/0:61:61:2242:0:0:0,-10,-10 1/1:17:0:0:17:618:-10,-5.11751,0 0/1:36:18:633:18:657:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	292 1 58814 . G A 1239.3 . AB=0.425532;ABP=7.53805;AC=1;AF=0.0294118;AN=34;AO=40;CIGAR=1X;TYPE=snp;mapq=36;coverage=4;xdp2=3,1 GT:DP:RO:QR:AO:QA:GL 0/1:94:54:2026:40:1494:-10,0,-10 0/0:22:22:822:0:0:0,-6.62266,-10 0/0:52:52:1945:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	293 1 58866 . C G 2036.2 . AB=0.318966;ABP=69.053;AC=7;AF=0.205882;AN=34;AO=74;CIGAR=1X;TYPE=snp;mapq=36;coverage=2;xdp2=0,2 GT:DP:RO:QR:AO:QA:GL 0/0:67:67:2539:0:0:0,-10,-10 0/1:10:0:0:10:354:-10,-3.0103,0 0/1:33:20:737:13:489:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	294 1 58989 . C G 1050.0 . AB=0.29771;ABP=49.5726;AC=6;AF=0.176471;AN=34;AO=41;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:67:67:2490:0:0:0,-10,-10 0/1:7:0:0:7:277:-10,-2.10721,0 0/1:30:19:708:11:411:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	295 1 59051 . A G 88.4 . AB=0.285714;ABP=19.7617;AC=4;AF=0.153846;AN=26;AO=19;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:94:94:3494:0:0:0,-10,-10 .:.:.:.:.:.:. 0/1:34:30:1117:4:136:-7.01127,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	296 1 59108 . G A 442.5 . AB=0.285714;ABP=25.3454;AC=1;AF=0.0294118;AN=34;AO=16;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:56:40:1528:16:637:-10,0,-10 0/0:2:2:67:0:0:0,-0.60206,-6.365 0/0:24:24:887:0:0:0,-7.22472,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	297 1 59121 . G T 380.0 . AB=0.285714;ABP=22.5536;AC=1;AF=0.0294118;AN=34;AO=14;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:49:35:1323:14:550:-10,0,-10 0/0:2:2:73:0:0:0,-0.60206,-6.935 0/0:24:24:895:0:0:0,-7.22472,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	298 1 59445 . T TAAAC 88.8 . AB=0.40625;ABP=7.89611;AC=6;AF=0.176471;AN=34;AO=29;CIGAR=1M4I5M;TYPE=ins;mapq=13;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:69:68:2591:0:0:0,-10,-10 0/0:3:3:119:0:0:0,-0.90309,-10 0/0:27:27:1020:0:0:0,-8.12781,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	299 1 59498 . T C 103.8 . AB=1;ABP=29.068;AC=5;AF=0.15625;AN=32;AO=17;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:112:112:4078:0:0:0,-10,-10 0/1:2:0:0:2:68:-6.46,-0.60206,0 0/0:38:37:1398:1:24:0,-7.45936,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	300 1 60249 . C T 611.4 . AB=0.28;ABP=34.5401;AC=1;AF=0.0294118;AN=34;AO=21;CIGAR=1X;TYPE=snp;mapq=25;coverage=6;xdp2=4,2 GT:DP:RO:QR:AO:QA:GL 0/1:75:54:1952:21:804:-10,0,-10 0/0:12:12:443:0:0:0,-3.61236,-10 0/0:37:37:1294:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	301 1 60332 . T C 6010.7 . AB=0.427481;ABP=20.9622;AC=16;AF=0.470588;AN=34;AO=210;CIGAR=1X;TYPE=snp;mapq=25;coverage=3;xdp2=0,3 GT:DP:RO:QR:AO:QA:GL 0/0:65:65:2371:0:0:0,-10,-10 1/1:11:0:0:11:392:-10,-3.31133,0 0/1:35:23:899:12:419:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	302 1 60791 . A G 80.2 . AB=0.909091;ABP=19.0002;AC=4;AF=0.166667;AN=24;AO=15;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:84:84:3011:0:0:0,-10,-10 0/0:1:0:0:1:34:-3.4,-0.30103,0 0/0:31:31:1130:0:0:0,-9.33193,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	303 1 61021 . G A 473.4 . AB=0.478261;ABP=3.19912;AC=7;AF=0.205882;AN=34;AO=23;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:46:46:1720:0:0:0,-10,-10 0/0:4:4:156:0:0:0,-1.20412,-10 0/0:18:18:620:0:0:0,-5.41854,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	304 1 61219 . T C 1008.0 . AB=0.274809;ABP=60.7118;AC=13;AF=0.382353;AN=34;AO=47;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:60:59:2194:0:0:0,-10,-10 0/1:2:0:0:2:74:-7.03,-0.60206,0 0/1:17:14:507:3:114:-8.355,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	305 1 61289 . A AG 885.8 . AB=0.530303;ABP=3.53672;AC=10;AF=0.3125;AN=32;AO=53;CIGAR=1M1I1M;TYPE=ins GT:DP:RO:QR:AO:QA:GL 0/0:106:106:3931:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:32:29:1050:2:60:0,-1.29114,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	306 1 61350 . T TA 1234.1 . AB=0.440909;ABP=9.68264;AC=10;AF=0.294118;AN=34;AO=126;CIGAR=1M1I12M;TYPE=ins;mapq=37;coverage=4;xdp2=4,0 GT:DP:RO:QR:AO:QA:GL 0/.:42:28:1066:0:0:-10,-10,-10 0/0:11:11:400:0:0:0,-3.31133,-10 0/.:24:16:612:0:0:-10,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	307 1 61350 . TA T 1234.1 . AB=0.207143;ABP=107.303;AC=3;AF=0.0882353;AN=34;AO=45;CIGAR=1M1D11M;TYPE=del;mapq=37;coverage=4;xdp2=4,0 GT:DP:RO:QR:AO:QA:GL 0/1:42:28:1066:11:186:-10,0,-10 0/0:11:11:400:0:0:0,-3.31133,-10 0/1:24:16:612:8:172:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	308 1 61442 . A G 9490.6 . AB=0;ABP=0;AC=32;AF=1;AN=32;AO=286;CIGAR=1X;TYPE=snp;mapq=35.5;coverage=4;xdp2=0,4 GT:DP:RO:QR:AO:QA:GL 1/1:53:0:0:53:1995:-10,-10,0 1/1:1:0:0:1:37:-3.7,-0.30103,0 1/1:26:0:0:26:945:-10,-7.82678,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	309 1 61499 . G A 2247.0 . AB=0.253521;ABP=190.338;AC=12;AF=0.352941;AN=34;AO=93;CIGAR=1X;TYPE=snp;mapq=37;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:94:94:3589:0:0:0,-10,-10 0/1:4:0:0:4:159:-10,-1.20412,0 0/1:50:41:1496:9:346:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	310 1 61579 . G A 707.3 . AB=0.337838;ABP=19.9126;AC=1;AF=0.0294118;AN=34;AO=26;CIGAR=1X;TYPE=snp;mapq=25;coverage=2;xdp2=2,0 GT:DP:RO:QR:AO:QA:GL 0/1:74:49:1869:25:925:-10,0,-10 0/0:6:6:227:0:0:0,-1.80618,-10 0/0:39:39:1500:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	311 1 61851 . T A 1851.7 . AB=0.303502;ABP=89.2017;AC=9;AF=0.264706;AN=34;AO=93;CIGAR=1X;TYPE=snp;mapq=22;coverage=2;xdp2=1,1 GT:DP:RO:QR:AO:QA:GL 0/0:103:103:3688:0:0:0,-10,-10 0/1:5:0:0:5:189:-10,-1.50515,0 0/1:42:33:1215:9:343:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	312 1 61871 . C CT 2050.2 . AB=0.289189;ABP=145.834;AC=13;AF=0.382353;AN=34;AO=113;CIGAR=1M1I10M;TYPE=ins;mapq=35.5;coverage=2;xdp2=2,0 GT:DP:RO:QR:AO:QA:GL 0/1:76:59:2121:15:461:-10,0,-10 0/1:6:0:0:6:158:-10,-1.80618,0 0/1:38:27:988:10:272:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	313 1 61987 . AAG GAC 7455.0 . AB=0.43913;ABP=17.8141;AC=16;AF=0.470588;AN=34;AO=247;CIGAR=1X1M1X;TYPE=complex;mapq=54.2;coverage=5;xdp2=3,2 GT:DP:RO:QR:AO:QA:GL 0/0:68:68:2493:0:0:0,-10,-10 1/1:17:0:0:17:602:-10,-5.11751,0 0/1:37:17:583:20:649:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	314 1 62203 . T C 9054.0 . AB=0.411654;ABP=39.0763;AC=16;AF=0.470588;AN=34;AO=279;CIGAR=1X;TYPE=snp;mapq=26.6;coverage=5;xdp2=1,4 GT:DP:RO:QR:AO:QA:GL 0/0:104:104:3880:0:0:0,-10,-10 1/1:20:0:0:20:751:-10,-6.0206,0 0/1:51:36:1346:15:579:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	315 1 62239 . TAC T 2646.6 . AB=0.334177;ABP=97.3512;AC=13;AF=0.382353;AN=34;AO=132;CIGAR=1M2D15M;TYPE=del;mapq=27;coverage=2;xdp2=0,2 GT:DP:RO:QR:AO:QA:GL 0/0:82:81:3019:0:0:0,-10,-10 0/1:6:0:0:6:193:-10,-1.80618,0 0/1:46:34:1254:9:254:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	316 1 62271 . A G 2164.8 . AB=0.266106;ABP=172.647;AC=13;AF=0.382353;AN=34;AO=95;CIGAR=1X;TYPE=snp;mapq=27;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:83:83:3128:0:0:0,-10,-10 0/1:4:0:0:4:148:-10,-1.20412,0 0/1:52:44:1567:8:276:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	317 1 62578 . G A 177.6 . AB=1;ABP=31.2394;AC=4;AF=0.133333;AN=30;AO=25;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:137:137:5182:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:36:35:1324:1:37:0,-5.58078,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	318 1 62777 . A T 4344.6 . AB=0.344828;ABP=69.7269;AC=16;AF=0.470588;AN=34;AO=147;CIGAR=1X;TYPE=snp;mapq=28.1429;coverage=7;xdp2=2,5 GT:DP:RO:QR:AO:QA:GL 0/0:116:116:4181:0:0:0,-10,-10 1/1:12:0:0:12:465:-10,-3.61236,0 0/1:32:25:873:7:239:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	319 1 63239 . C T 78.9 . AB=1;ABP=20.3821;AC=3;AF=0.115385;AN=26;AO=16;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:70:69:2539:1:34:0,-10,-10 .:.:.:.:.:.:. 0/0:30:30:1134:0:0:0,-9.0309,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	320 1 63268 . T C 331.4 . AB=1;ABP=55.1256;AC=7;AF=0.233333;AN=30;AO=39;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:76:70:2639:6:199:-3.70307,0,-10 .:.:.:.:.:.:. 0/0:25:24:904:1:17:0,-4.42781,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	321 1 63336 . C T 3933.0 . AB=0.549356;ABP=7.94038;AC=7;AF=0.205882;AN=34;AO=128;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:70:49:1805:21:792:-10,0,-10 0/0:6:6:243:0:0:0,-1.80618,-10 0/1:25:8:314:17:627:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	322 1 63495 . C T 879.9 . AB=0.481481;ABP=3.25157;AC=8;AF=0.235294;AN=34;AO=39;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:68:68:2525:0:0:0,-10,-10 0/0:3:3:109:0:0:0,-0.90309,-10 0/0:17:17:633:0:0:0,-5.11751,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	323 1 63516 . A G 456.0 . AB=0.195266;ABP=139.325;AC=8;AF=0.25;AN=32;AO=40;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:69:63:2296:6:219:-7.38267,0,-10 0/0:1:0:0:1:35:-3.5,-0.30103,0 0/0:18:16:582:2:63:-2.75115,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	324 1 63527 . T C 636.3 . AB=0.435294;ABP=6.10145;AC=10;AF=0.333333;AN=30;AO=46;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:63:58:2091:5:176:-4.07399,0,-10 .:.:.:.:.:.:. 0/0:14:13:475:1:35:-0.431708,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	325 1 63671 . G A 439.4 . AB=0.204545;ABP=69.7337;AC=1;AF=0.0294118;AN=34;AO=18;CIGAR=1X;TYPE=snp;mapq=12.25;coverage=4;xdp2=0,4 GT:DP:RO:QR:AO:QA:GL 0/1:88:69:2494:18:673:-10,0,-10 0/0:23:23:859:0:0:0,-6.92369,-10 0/0:43:43:1556:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	326 1 63697 . T C 3900.2 . AB=0.397727;ABP=26.9952;AC=11;AF=0.323529;AN=34;AO=132;CIGAR=1X;TYPE=snp;mapq=25;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/1:64:56:2024:8:295:-10,0,-10 0/0:17:17:620:0:0:0,-5.11751,-10 0/0:42:42:1551:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	327 1 63735 . CCTA C 2709.8 . AB=0.603448;ABP=19.184;AC=11;AF=0.323529;AN=34;AO=153;CIGAR=1M3D4M;TYPE=del;mapq=25;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 1/1:50:2:65:48:1228:-10,-5.78836,0 0/0:7:7:233:0:0:0,-2.10721,-10 0/1:27:10:342:17:358:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	328 1 63792 . G T 14.0 . AB=1;ABP=9.52472;AC=1;AF=0.0454545;AN=22;AO=9;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:78:78:2925:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:29:28:1022:1:37:0,-3.56747,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	329 1 64235 . T C 93.8 . AB=0.428571;ABP=3.63072;AC=1;AF=0.0333333;AN=30;AO=6;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:14:8:305:6:205:-10,0,-10 .:.:.:.:.:.:. 0/0:5:5:186:0:0:0,-1.50515,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	330 1 64428 . G A 1861.7 . AB=0.390533;ABP=20.6005;AC=6;AF=0.176471;AN=34;AO=66;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:32:25:942:7:259:-10,0,-10 0/0:19:19:730:0:0:0,-5.71957,-10 0/1:25:10:393:15:515:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	331 1 64442 . G A 1173.5 . AB=0.281437;ABP=72.3024;AC=7;AF=0.205882;AN=34;AO=47;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:28:28:1079:0:0:0,-8.42884,-10 0/1:18:11:424:7:271:-10,0,-10 0/1:27:22:809:5:186:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	332 1 64517 . GG T 247.7 . AB=0.48;ABP=3.27088;AC=7;AF=0.205882;AN=34;AO=37;CIGAR=1M1D4M1X1M;TYPE=complex GT:DP:RO:QR:AO:QA:GL 0/0:22:19:589:0:0:0,-5.71957,-10 0/0:9:8:226:0:0:0,-2.40824,-10 0/0:18:18:517:0:0:0,-5.41854,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	333 1 64548 . ACTAG CCTAA 1161.6 . AB=0.396947;ABP=15.0943;AC=13;AF=0.382353;AN=34;AO=52;CIGAR=1X3M1X;TYPE=complex;mapq=40;coverage=2;xdp2=2,0 GT:DP:RO:QR:AO:QA:GL 0/0:18:18:639:0:0:0,-5.41854,-10 0/1:5:2:70:3:94:-8.26818,0,-6.14485 0/1:15:11:385:4:156:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	334 1 64613 . T A 1408.7 . AB=0.224852;ABP=225.271;AC=9;AF=0.264706;AN=34;AO=82;CIGAR=1X;TYPE=snp;mapq=46;coverage=5;xdp2=3,2 GT:DP:RO:QR:AO:QA:GL 0/1:47:41:1511:6:218:-10,0,-10 0/1:19:9:340:10:335:-10,0,-10 0/1:42:30:1063:12:417:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	335 1 64832 . C T 81.9 . AB=0.142857;ABP=127.094;AC=4;AF=0.117647;AN=34;AO=36;CIGAR=1X;TYPE=snp;mapq=27;coverage=9;xdp2=3,6 GT:DP:RO:QR:AO:QA:GL 0/0:63:58:2183:4:153:-1.10265,0,-10 0/1:12:9:336:3:117:-9.65006,0,-10 0/0:47:44:1589:3:107:-0.0481738,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	336 1 64927 . G T 310.2 . AB=0.314815;ABP=19.0953;AC=3;AF=0.0882353;AN=34;AO=27;CIGAR=1X;TYPE=snp;mapq=36.5;coverage=2;xdp2=0,2 GT:DP:RO:QR:AO:QA:GL 0/0:63:61:2264:2:78:0,-8.26419,-10 0/1:16:8:274:8:309:-10,0,-10 0/0:35:33:1193:2:80:0,-0.161533,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	337 1 64976 . C T 1379.6 . AB=0.358333;ABP=23.9288;AC=14;AF=0.411765;AN=34;AO=67;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:58:54:1992:4:141:-1.2104,0,-10 0/1:2:0:0:2:78:-7.41,-0.60206,0 0/1:32:28:1036:4:152:-8.98286,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	338 1 65745 . A G 19.4 . AB=0.3;ABP=6.48466;AC=2;AF=0.0666667;AN=30;AO=6;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:25:25:918:0:0:0,-7.52575,-10 0/1:1:0:0:1:39:-3.9,-0.30103,0 0/0:9:8:293:1:36:-1.84497,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	339 1 65797 . T C 401.7 . AB=0.294118;ABP=34.305;AC=10;AF=0.294118;AN=34;AO=26;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:33:33:1262:0:0:0,-9.93399,-10 0/1:4:0:0:4:145:-10,-1.20412,0 0/1:13:11:418:2:65:-4.1537,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	340 1 65872 . T G 2125.4 . AB=0.407407;ABP=15.074;AC=16;AF=0.470588;AN=34;AO=82;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:41:41:1527:0:0:0,-10,-10 1/1:6:0:0:6:227:-10,-1.80618,0 0/1:21:9:324:12:460:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	341 1 66008 . C G 575.8 . AB=0.280374;ABP=47.84;AC=6;AF=0.1875;AN=32;AO=37;CIGAR=1X;TYPE=snp;mapq=27;coverage=1;xdp2=1,0 GT:DP:RO:QR:AO:QA:GL 0/0:63:63:2381:0:0:0,-10,-10 0/1:3:0:0:3:108:-10,-0.90309,0 0/1:21:18:709:3:109:-6.97556,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	342 1 66160 . TTATATA T 3221.7 . AB=0.489796;ABP=3.09893;AC=11;AF=0.323529;AN=34;AO=63;CIGAR=1M6D9M;TYPE=del;mapq=27;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:31:30:1151:0:0:0,-9.0309,-10 ./.:8:0:0:0:0:-10,-10,-10 0/.:28:14:549:0:0:-10,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	343 1 66162 . A T 3221.7 . AB=0.514851;ABP=3.3973;AC=16;AF=0.470588;AN=34;AO=118;CIGAR=2M1X13M;TYPE=snp;mapq=27;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:31:30:1151:0:0:0,-9.0309,-10 1/1:8:0:0:8:207:-10,-2.40824,0 0/1:28:14:549:14:447:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	344 1 66221 . A AT 968.3 . AB=0.411215;ABP=10.3365;AC=12;AF=0.352941;AN=34;AO=47;CIGAR=1M1I2M;TYPE=ins GT:DP:RO:QR:AO:QA:GL 0/0:5:5:196:0:0:0,-1.50515,-10 0/1:4:2:81:2:69:-6.12903,0,-7.26903 0/1:24:14:537:9:300:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	345 1 66225 . AT A 1000.6 . AB=0.393939;ABP=12.6832;AC=12;AF=0.375;AN=32;AO=41;CIGAR=1M1D1M;TYPE=del GT:DP:RO:QR:AO:QA:GL 0/0:5:5:198:0:0:0,-1.50515,-10 0/1:4:2:81:2:62:-5.46403,0,-7.26903 0/1:22:14:541:8:309:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	346 1 66229 . T TACA 15.5 . AB=0.5;ABP=3.0103;AC=1;AF=0.0333333;AN=30;AO=2;CIGAR=1M3I1M;TYPE=ins GT:DP:RO:QR:AO:QA:GL 0/0:5:5:181:0:0:0,-1.50515,-10 0/1:4:2:76:2:78:-6.98403,0,-6.79403 0/0:22:22:848:0:0:0,-6.62266,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	347 1 66231 . TAATA T 6.9 . AB=0.5;ABP=3.0103;AC=1;AF=0.0357143;AN=28;AO=2;CIGAR=1M4D1M;TYPE=del GT:DP:RO:QR:AO:QA:GL 0/1:4:2:75:2:67:-5.93903,0,-6.69903 0/0:4:4:147:0:0:0,-1.20412,-10 0/0:20:20:776:0:0:0,-6.0206,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	348 1 66248 . TATA T 303.7 . AB=0.414634;ABP=5.60547;AC=5;AF=0.3125;AN=16;AO=18;CIGAR=1M3D4M;TYPE=del GT:DP:RO:QR:AO:QA:GL 0/0:2:2:79:0:0:0,-0.60206,-7.505 0/0:2:0:0:0:0:0,0,0 0/1:15:11:428:4:135:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	349 1 66258 . A T 21.1 . AB=1;ABP=7.35324;AC=1;AF=0.0625;AN=16;AO=2;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:2:2:82:0:0:0,-0.60206,-7.79 0/1:2:0:0:2:82:-7.79,-0.60206,0 0/0:18:18:694:0:0:0,-5.41854,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	350 1 66262 . TAA T 287.5 . AB=0.317073;ABP=14.9269;AC=4;AF=0.285714;AN=14;AO=13;CIGAR=1M2D1M;TYPE=del GT:DP:RO:QR:AO:QA:GL 0/0:2:2:76:0:0:0,-0.60206,-7.22 .:.:.:.:.:.:. 0/1:16:12:456:4:153:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	351 1 66275 . AAT A 95.3 . AB=0.206897;ABP=24.6501;AC=2;AF=0.142857;AN=14;AO=7;CIGAR=1M2D1M;TYPE=del GT:DP:RO:QR:AO:QA:GL 0/0:1:1:30:0:0:0,-0.30103,-3 0/0:2:2:79:0:0:0,-0.60206,-7.505 0/1:20:13:491:3:116:-8.38528,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	352 1 66289 . AT A 43.0 . AB=0.272727;ABP=7.94546;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1M1D1M;TYPE=del GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. .:.:.:.:.:.:. 0/0:22:21:806:1:41:0,-1.18024,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	353 1 66300 . A ATAT 88.4 . AB=0.16129;ABP=33.9012;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=2M3I1M;TYPE=ins GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. .:.:.:.:.:.:. 0/.:21:16:612:1:41:-8.16175,-8.35631,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	354 1 66300 . A AT 88.4 . AB=0.16129;ABP=33.9012;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=2M1I1M;TYPE=ins GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. .:.:.:.:.:.:. 0/1:21:16:612:3:121:-8.16175,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	355 1 66312 . A T 108.1 . AB=0.170732;ABP=41.6201;AC=3;AF=0.25;AN=12;AO=7;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. .:.:.:.:.:.:. 0/1:21:19:748:2:82:-3.79059,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	356 1 66335 . T A 756.9 . AB=0.345679;ABP=19.7655;AC=6;AF=0.5;AN=12;AO=28;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. .:.:.:.:.:.:. 0/1:33:22:870:11:384:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	357 1 66336 . T A 167.7 . AB=0.169231;ABP=64.7803;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. .:.:.:.:.:.:. 0/1:33:29:1143:4:159:-9.38545,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	358 1 66359 . T TA 286.4 . AB=0.175258;ABP=91.8616;AC=5;AF=0.357143;AN=14;AO=17;CIGAR=1M1I2M;TYPE=ins GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. .:.:.:.:.:.:. 0/1:43:36:1408:7:265:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	359 1 66363 . TA T 1156.8 . AB=0.412371;ABP=9.47994;AC=7;AF=0.5;AN=14;AO=40;CIGAR=1M1D1M;TYPE=del GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. .:.:.:.:.:.:. 0/1:40:26:1035:14:539:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	360 1 66369 . TA T 765.7 . AB=0.263158;ABP=49.2969;AC=3;AF=0.214286;AN=14;AO=25;CIGAR=1M1D1M;TYPE=del GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. .:.:.:.:.:.:. 0/.:39:20:800:8:314:-10,-8.60693,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	361 1 66371 . A T 765.7 . AB=0.27957;ABP=42.2602;AC=4;AF=0.285714;AN=14;AO=26;CIGAR=2M1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. .:.:.:.:.:.:. 0/1:39:20:800:11:404:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	362 1 66373 . ATATAA TT 1265.4 . AB=0.302632;ABP=28.7251;AC=8;AF=0.571429;AN=14;AO=26;CIGAR=1M1X1M4D1M;TYPE=complex GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. .:.:.:.:.:.:. 1/.:33:0:0:11:404:-10,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	363 1 66375 . ATAA TAT 1265.4 . AB=0.217949;ABP=56.9074;AC=4;AF=0.285714;AN=14;AO=17;CIGAR=3M1D2M1X1M;TYPE=complex GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. .:.:.:.:.:.:. ./.:33:0:0:7:264:-10,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	364 1 66376 . TA T 1265.4 . AB=0.223684;ABP=53.4113;AC=2;AF=0.142857;AN=14;AO=17;CIGAR=5M1D2M;TYPE=del GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. .:.:.:.:.:.:. ./1:33:0:0:9:361:-10,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	365 1 66432 . T TATA 710.3 . AB=0.2;ABP=128.087;AC=6;AF=0.333333;AN=18;AO=32;CIGAR=1M3I4M;TYPE=ins GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. 0/0:3:3:119:0:0:0,-0.90309,-10 0/1:50:41:1608:8:294:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	366 1 66442 . T A 1196.0 . AB=0.258824;ABP=88.8984;AC=4;AF=0.222222;AN=18;AO=44;CIGAR=1X1M;TYPE=snp GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. 0/.:3:2:80:0:0:-3.57403,-4.17609,-10 0/.:48:25:958:10:333:-10,-0.146852,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	367 1 66442 . T TCTATATA 1196.0 . AB=0.2;ABP=139.813;AC=5;AF=0.277778;AN=18;AO=35;CIGAR=1M7I1M;TYPE=ins GT:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:. 0/1:3:2:80:1:40:-3.57403,0,-7.17403 0/1:48:25:958:9:337:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	368 1 66487 . GAATAT G 168.8 . AB=0.275862;ABP=15.6647;AC=2;AF=0.125;AN=16;AO=8;CIGAR=1M5D6M;TYPE=del GT:DP:RO:QR:AO:QA:GL 0/0:1:1:40:0:0:0,-0.30103,-4 0/0:1:1:40:0:0:0,-0.30103,-4 0/0:17:17:659:0:0:0,-5.11751,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	369 1 66507 . T A 1338.1 . AB=0.361345;ABP=22.882;AC=5;AF=0.25;AN=20;AO=43;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:2:1:41:1:41:-3.79897,0,-3.79897 .:.:.:.:.:.:. 0/1:27:18:712:9:360:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	370 1 66514 . T C 8.1 . AB=1;ABP=7.35324;AC=1;AF=0.0454545;AN=22;AO=9;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:2:1:39:1:40:-3.69897,0,-3.59897 .:.:.:.:.:.:. 0/0:27:25:971:2:81:-2.1125,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	371 1 66520 . T G 611.7 . AB=0.27451;ABP=48.0577;AC=9;AF=0.409091;AN=22;AO=30;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:2:1:31:1:41:-3.79897,0,-2.79897 .:.:.:.:.:.:. 0/1:27:19:745:8:325:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	372 1 66521 . T TATATA 451.9 . AB=0.237624;ABP=63.403;AC=11;AF=0.5;AN=22;AO=24;CIGAR=1M5I11M;TYPE=ins GT:DP:RO:QR:AO:QA:GL 0/1:2:1:40:0:0:0,-0.30103,-3.755 .:.:.:.:.:.:. 0/1:21:9:358:3:106:-8.33506,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	373 1 66572 . GTA G 463.5 . AB=0.223529;ABP=59.443;AC=5;AF=0.227273;AN=22;AO=20;CIGAR=1M2D1M;TYPE=del GT:DP:RO:QR:AO:QA:GL 0/0:2:2:71:0:0:0,-0.60206,-6.745 0/1:1:0:0:1:39:-3.9,-0.30103,0 0/1:19:14:532:5:197:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	374 1 66577 . A C 482.1 . AB=0.210526;ABP=72.1546;AC=6;AF=0.272727;AN=22;AO=20;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:3:3:110:0:0:0,-0.90309,-10 0/1:1:0:0:1:38:-3.8,-0.30103,0 0/1:19:14:553:5:204:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	375 1 66737 . G A 13.9 . AB=0.208333;ABP=20.744;AC=2;AF=0.0666667;AN=30;AO=5;CIGAR=1X;TYPE=snp;mapq=23;coverage=4;xdp2=1,3 GT:DP:RO:QR:AO:QA:GL 0/0:46:46:1687:0:0:0,-10,-10 0/0:7:7:268:0:0:0,-2.10721,-10 0/0:26:26:916:0:0:0,-7.82678,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	376 1 66814 . A G 900.3 . AB=0.493671;ABP=3.03779;AC=9;AF=0.321429;AN=28;AO=40;CIGAR=1X;TYPE=snp;mapq=19;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:62:61:2322:1:37:0,-10,-10 0/1:2:0:0:2:71:-6.745,-0.60206,0 0/0:17:17:650:0:0:0,-5.11751,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	377 1 69081 . G C 15.4 . AB=0.333333;ABP=4.45795;AC=1;AF=0.0555556;AN=18;AO=2;CIGAR=1X;TYPE=snp;AC_AFR=0;AC_AMR=0;AC_EAS=0 GT:DP:RO:QR:AO:QA:GL 0/1:6:4:151:2:75:-6.49491,0,-10 .:.:.:.:.:.:. .:.:.:.:.:.:.
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	378 1 69270 . A G 1229.5 . AB=0;ABP=0;AC=14;AF=1;AN=14;AO=43;CIGAR=1X;TYPE=snp;AC_AFR=166;AC_AMR=48;AC_EAS=114 GT:DP:RO:QR:AO:QA:GL 1/1:12:0:0:12:399:-10,-3.61236,0 .:.:.:.:.:.:. 1/1:9:0:0:9:303:-10,-2.70927,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	379 1 69511 . A G 3184.7 . AB=0;ABP=0;AC=14;AF=1;AN=14;AO=106;CIGAR=1X;TYPE=snp;AC_AFR=4392;AC_AMR=6155;AC_EAS=8379;ID=rs75062661 GT:DP:RO:QR:AO:QA:GL 1/1:23:0:0:23:818:-10,-6.92369,0 .:.:.:.:.:.:. 1/1:18:0:0:18:626:-10,-5.41854,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	380 1 69897 . T C 1013.8 . AB=0.733333;ABP=10.1038;AC=11;AF=0.916667;AN=12;AO=33;CIGAR=1X;TYPE=snp;AC_AFR=90;AC_AMR=28;AC_EAS=62 GT:DP:RO:QR:AO:QA:GL 0/1:15:4:161:11:407:-10,0,-10 .:.:.:.:.:.:. 1/1:8:0:0:8:301:-10,-2.40824,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	381 1 70728 . C T 1921.6 . AB=0.374046;ABP=21.0617;AC=10;AF=0.294118;AN=34;AO=74;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:42:42:1481:0:0:0,-10,-10 0/0:8:8:293:0:0:0,-2.40824,-10 0/0:26:26:948:0:0:0,-7.82678,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	382 1 70761 . T C 47.3 . AB=0.454545;ABP=3.20771;AC=3;AF=0.115385;AN=26;AO=7;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:25:25:945:0:0:0,-7.52575,-10 0/0:1:1:34:0:0:0,-0.30103,-3.4 0/0:6:5:176:1:8:0,-0.228029,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	383 1 71807 . A C 289.1 . AB=0.6;ABP=4.74748;AC=1;AF=0.03125;AN=32;AO=12;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:20:8:306:12:452:-10,0,-10 0/0:10:10:387:0:0:0,-3.0103,-10 0/0:7:7:273:0:0:0,-2.10721,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	384 1 71846 . CT C 36.2 . AB=0.296296;ABP=12.7417;AC=3;AF=0.107143;AN=28;AO=12;CIGAR=1M1D15M;TYPE=del GT:DP:RO:QR:AO:QA:GL 0/1:14:9:322:3:102:-8.02406,0,-10 0/0:9:9:333:0:0:0,-2.70927,-10 0/0:9:8:288:1:1:0,-1.65503,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	385 1 71875 . G A 1377.4 . AB=0.513889;ABP=3.13094;AC=19;AF=0.678571;AN=28;AO=75;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:27:25:717:2:14:0,-4.2525,-10 1/1:9:0:0:9:289:-10,-2.70927,0 0/1:10:5:127:5:169:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	386 1 71907 . T G 1000.0 . AB=0.546875;ABP=4.23175;AC=7;AF=0.269231;AN=26;AO=45;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:26:17:630:9:284:-10,0,-10 0/0:2:2:65:0:0:0,-0.60206,-6.175 0/1:9:2:66:7:235:-10,0,-5.11703
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	387 1 72446 . T A 442.7 . AB=0.333333;ABP=15.3153;AC=1;AF=0.0714286;AN=14;AO=17;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:51:34:1262:17:594:-10,0,-10 .:.:.:.:.:.:. 0/0:21:21:723:0:0:0,-6.32163,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	388 1 72787 . C T 478.8 . AB=0;ABP=0;AC=14;AF=1;AN=14;AO=16;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 1/1:3:0:0:3:94:-8.77333,-0.90309,0 .:.:.:.:.:.:. 1/1:1:0:0:1:34:-3.4,-0.30103,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	389 1 72862 . G A 3209.9 . AB=0.462185;ABP=4.48836;AC=24;AF=0.705882;AN=34;AO=114;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:36:36:1356:0:0:0,-10,-10 1/1:9:0:0:9:349:-10,-2.70927,0 0/1:12:8:300:4:151:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	390 1 72893 . T C 2485.2 . AB=0.39779;ABP=19.4343;AC=16;AF=0.470588;AN=34;AO=94;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:45:45:1703:0:0:0,-10,-10 1/1:12:0:0:12:456:-10,-3.61236,0 0/1:16:13:458:3:117:-8.85171,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	391 1 73233 . T C 1.2 . AB=1;ABP=7.35324;AC=1;AF=0.0454545;AN=22;AO=9;CIGAR=1X;TYPE=snp;mapq=18;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:69:69:2545:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:22:21:799:1:41:0,-1.18024,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	392 1 73259 . C T 77.1 . AB=0.37037;ABP=6.95112;AC=3;AF=0.107143;AN=28;AO=19;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:79:79:2949:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:29:27:993:2:68:-0.338656,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	393 1 73353 . T C 1028.1 . AB=0.535714;ABP=3.63072;AC=9;AF=0.264706;AN=34;AO=40;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:22:22:826:0:0:0,-6.62266,-10 0/0:3:3:117:0:0:0,-0.90309,-10 0/0:14:14:543:0:0:0,-4.21442,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	394 1 73648 . C G 2.4 . AB=0.2;ABP=10.8276;AC=1;AF=0.0384615;AN=26;AO=2;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:18:18:655:0:0:0,-5.41854,-10 0/0:2:2:73:0:0:0,-0.60206,-6.935 0/0:12:12:455:0:0:0,-3.61236,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	395 1 73673 . CAT C 32.6 . AB=0.230769;ABP=11.1951;AC=1;AF=0.0384615;AN=26;AO=3;CIGAR=1M2D1M;TYPE=del GT:DP:RO:QR:AO:QA:GL 0/1:13:10:364:3:108:-8.62298,0,-10 0/0:1:1:35:0:0:0,-0.30103,-3.5 0/0:10:10:382:0:0:0,-3.0103,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	396 1 73841 . C T 5.4 . AB=0.206897;ABP=24.6501;AC=2;AF=0.0714286;AN=28;AO=18;CIGAR=1X;TYPE=snp;mapq=6;coverage=1;xdp2=1,0 GT:DP:RO:QR:AO:QA:GL 0/0:86:85:2909:1:7:0,-10,-10 0/1:4:1:7:3:81:-6.95794,0,-0.09794 0/0:34:33:1144:1:11:0,-7.60354,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	397 1 73883 . T A 2.5 . AB=0.666667;ABP=3.73412;AC=1;AF=0.0384615;AN=26;AO=4;CIGAR=1X;TYPE=snp;mapq=6;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:59:58:1856:1:7:0,-10,-10 0/0:1:1:10:0:0:0,-0.30103,-1 0/0:21:21:708:0:0:0,-6.32163,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	398 1 74555 . A G 501.0 . AB=0.27957;ABP=42.2602;AC=12;AF=0.352941;AN=34;AO=26;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:15:15:569:0:0:0,-4.51545,-10 0/1:6:4:162:2:81:-7.06491,0,-10 0/0:9:9:351:0:0:0,-2.70927,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	399 1 74570 . T A 151.3 . AB=0.229508;ABP=41.7764;AC=7;AF=0.21875;AN=32;AO=16;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:17:17:609:0:0:0,-5.11751,-10 0/1:6:4:156:2:78:-6.77991,0,-10 0/0:7:7:267:0:0:0,-2.10721,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	400 1 74681 . G T 8746.2 . AB=0.774194;ABP=104.229;AC=26;AF=0.764706;AN=34;AO=296;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 1/1:38:0:0:38:1414:-10,-10,0 0/1:12:3:106:9:346:-10,0,-8.6234 1/1:23:1:35:22:824:-10,-2.06196,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	401 1 74709 . T A 313.9 . AB=0.177966;ABP=109.302;AC=6;AF=0.176471;AN=34;AO=31;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:46:46:1610:0:0:0,-10,-10 0/1:12:10:356:2:82:-5.99718,0,-10 0/0:26:25:878:1:40:0,-2.41181,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	402 1 74764 . A T 495.4 . AB=0.266187;ABP=69.0137;AC=14;AF=0.411765;AN=34;AO=56;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:51:51:1800:0:0:0,-10,-10 0/1:3:1:37:2:61:-5.36903,0,-3.27403 0/0:24:22:782:2:69:-1.77119,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	403 1 74771 . A G 146.3 . AB=0.4;ABP=6.91895;AC=9;AF=0.28125;AN=32;AO=35;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:54:52:1918:2:72:0,-6.25998,-10 0/1:2:0:0:2:70:-6.65,-0.60206,0 0/0:25:24:890:1:35:0,-2.62781,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	404 1 75139 . C G 2352.7 . AB=0.407821;ABP=16.2211;AC=15;AF=0.441176;AN=34;AO=88;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:24:24:886:0:0:0,-7.22472,-10 0/1:10:1:36:9:348:-10,0,-1.5897 0/1:18:11:415:7:267:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	405 1 75194 . G C 1087.8 . AB=0.329114;ABP=23.0483;AC=18;AF=0.529412;AN=34;AO=47;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:27:27:1021:0:0:0,-8.12781,-10 0/1:3:1:38:2:79:-7.07903,0,-3.37403 0/1:9:7:243:1:41:-2.35485,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	406 1 75206 . G A 813.0 . AB=0.352941;ABP=15.7837;AC=17;AF=0.53125;AN=32;AO=39;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:26:26:904:0:0:0,-7.82678,-10 0/1:2:0:0:2:77:-7.315,-0.60206,0 0/0:8:8:252:0:0:0,-2.40824,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	407 1 76573 . C T 186.5 . AB=0.197183;ABP=59.5603;AC=4;AF=0.125;AN=32;AO=19;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:63:62:2258:1:37:0,-10,-10 0/0:1:1:37:0:0:0,-0.30103,-3.7 0/0:24:24:922:0:0:0,-7.22472,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	408 1 76610 . C A 1.1 . AB=0.666667;ABP=3.73412;AC=1;AF=0.0384615;AN=26;AO=7;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:66:66:2459:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:24:22:825:2:64:-1.29619,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	409 1 77202 . T A 239.8 . AB=0.359223;ABP=38.4707;AC=20;AF=0.588235;AN=34;AO=87;CIGAR=1X4M;TYPE=snp;mapq=37;coverage=1;xdp2=1,0 GT:DP:RO:QR:AO:QA:GL 0/1:36:21:709:7:91:-5.85319,0,-10 0/1:5:1:39:4:30:-1.96882,0,-3.09382 0/1:19:8:260:8:109:-9.14643,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	410 1 77430 . G A 37.1 . AB=0.666667;ABP=4.45795;AC=2;AF=0.0588235;AN=34;AO=10;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:64:64:2395:0:0:0,-10,-10 0/0:3:3:111:0:0:0,-0.90309,-10 0/0:25:24:912:1:39:0,-2.22781,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	411 1 77462 . G A 4.8 . AB=1;ABP=7.35324;AC=1;AF=0.0357143;AN=28;AO=13;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:63:61:2300:1:38:0,-10,-10 0/1:2:0:0:2:82:-7.79,-0.60206,0 0/0:38:37:1457:1:40:0,-5.85936,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	412 1 78061 . C G 1159.2 . AB=0.422222;ABP=7.73928;AC=1;AF=0.0714286;AN=14;AO=38;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:90:52:1982:38:1440:-10,0,-10 .:.:.:.:.:.:. 0/0:21:21:806:0:0:0,-6.32163,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	413 1 79033 . A G 338.7 . AB=0;ABP=0;AC=14;AF=1;AN=14;AO=12;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 1/1:2:0:0:2:35:-3.325,-0.60206,0 .:.:.:.:.:.:. 1/1:1:0:0:1:35:-3.5,-0.30103,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	414 1 79050 . G T 616.4 . AB=0;ABP=0;AC=14;AF=1;AN=14;AO=20;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 1/1:6:0:0:6:225:-10,-1.80618,0 .:.:.:.:.:.:. 1/1:1:0:0:1:35:-3.5,-0.30103,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	415 1 79301 . C A 428.9 . AB=0.326923;ABP=16.5402;AC=2;AF=0.1;AN=20;AO=17;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:52:34:1073:17:606:-10,0,-10 .:.:.:.:.:.:. 0/0:16:16:532:0:0:0,-4.81648,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	416 1 79629 . A C 762.7 . AB=0.388889;ABP=10.7311;AC=2;AF=0.125;AN=16;AO=28;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:72:44:1555:28:963:-10,0,-10 .:.:.:.:.:.:. 0/0:25:25:896:0:0:0,-7.52575,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	417 1 79898 . A G 614.5 . AB=0.318841;ABP=22.6794;AC=1;AF=0.0714286;AN=14;AO=22;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:69:47:1699:22:795:-10,0,-10 .:.:.:.:.:.:. 0/0:22:22:824:0:0:0,-6.62266,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	418 1 80849 . G C 156.8 . AB=0.388889;ABP=4.9405;AC=1;AF=0.0714286;AN=14;AO=7;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:18:11:411:7:268:-10,0,-10 .:.:.:.:.:.:. 0/0:8:8:297:0:0:0,-2.40824,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	419 1 82133 . CAA C 739.0 . AB=0.509434;ABP=3.05127;AC=11;AF=0.6875;AN=16;AO=47;CIGAR=1M2D20M;TYPE=del GT:DP:RO:QR:AO:QA:GL 0/1:29:4:131:12:210:-10,0,-10 .:.:.:.:.:.:. 0/1:15:3:95:9:225:-10,0,-7.40006
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	420 1 82162 . C A 136.6 . AB=0.928571;ABP=25.3454;AC=5;AF=0.178571;AN=28;AO=18;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:85:85:2614:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:27:27:903:0:0:0,-8.12781,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	421 1 82249 . A G 209.7 . AB=0.424242;ABP=4.65535;AC=4;AF=0.166667;AN=24;AO=18;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:86:85:3166:1:41:0,-10,-10 .:.:.:.:.:.:. 0/0:15:15:545:0:0:0,-4.51545,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	422 1 82400 . G A 605.2 . AB=0.30137;ABP=28.0269;AC=2;AF=0.0625;AN=32;AO=22;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:73:51:1911:22:815:-10,0,-10 0/0:2:2:68:0:0:0,-0.60206,-6.46 0/0:25:25:945:0:0:0,-7.52575,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	423 1 82652 . C G 830.5 . AB=0.291667;ABP=39.2015;AC=1;AF=0.0714286;AN=14;AO=29;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:96:68:2465:28:1063:-10,0,-10 .:.:.:.:.:.:. 0/0:30:30:1140:0:0:0,-9.0309,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	424 1 83084 . T A 5099.6 . AB=0;ABP=0;AC=14;AF=1;AN=14;AO=155;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 1/1:32:0:0:32:1251:-10,-9.63296,0 .:.:.:.:.:.:. 1/1:20:0:0:20:774:-10,-6.0206,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	425 1 83514 . C T 1419.2 . AB=0.782609;ABP=18.9659;AC=14;AF=0.777778;AN=18;AO=51;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:23:5:155:18:608:-10,0,-10 .:.:.:.:.:.:. 1/1:6:0:0:6:205:-10,-1.80618,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	426 1 83574 . G T 280.6 . AB=0.285714;ABP=19.7617;AC=1;AF=0.0416667;AN=24;AO=12;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:42:30:1120:12:433:-10,0,-10 .:.:.:.:.:.:. 0/0:7:7:266:0:0:0,-2.10721,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	427 1 83786 . T TA 75.9 . AB=0.413043;ABP=6.03148;AC=5;AF=0.178571;AN=28;AO=33;CIGAR=1M1I9M;TYPE=ins GT:DP:RO:QR:AO:QA:GL 0/0:74:73:2710:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:22:20:728:2:6:0,-3.68905,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	428 1 83819 . A AAGAAAG 342.3 . AB=0.394366;ABP=9.89173;AC=7;AF=0.25;AN=28;AO=29;CIGAR=5M6I9M;TYPE=ins GT:DP:RO:QR:AO:QA:GL 0/0:64:61:2187:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:19:19:675:0:0:0,-5.71957,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	429 1 83829 . G GAGAA 469.4 . AB=0.363636;ABP=8.34028;AC=6;AF=0.230769;AN=26;AO=14;CIGAR=1M4I45M;TYPE=ins GT:DP:RO:QR:AO:QA:GL 0/.:37:26:979:0:0:-10,-10,-10 .:.:.:.:.:.:. 0/0:10:10:343:0:0:0,-3.0103,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	430 1 83829 . GAGAA G 469.4 . AB=0;ABP=0;AC=2;AF=0.0769231;AN=26;AO=16;CIGAR=1M4D41M;TYPE=del GT:DP:RO:QR:AO:QA:GL 0/.:37:26:979:0:0:-10,-10,-10 .:.:.:.:.:.:. 0/0:10:10:343:0:0:0,-3.0103,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	431 1 83854 . AGAAAGAAAGAAAGAAAG GAGAAAGAAAGAAAGAAGA 469.4 . AB=0.189189;ABP=34.0565;AC=1;AF=0.0384615;AN=26;AO=7;CIGAR=25M1I16M2X3M;TYPE=complex GT:DP:RO:QR:AO:QA:GL 0/1:37:26:979:7:184:-10,0,-10 .:.:.:.:.:.:. 0/0:10:10:343:0:0:0,-3.0103,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	432 1 83878 . AAGAAAGAAAG A 10.1 . AB=0.170732;ABP=41.6201;AC=3;AF=0.09375;AN=32;AO=18;CIGAR=1M10D1M;TYPE=del GT:DP:RO:QR:AO:QA:GL 0/0:90:87:3239:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:26:24:897:1:40:0,-2.36281,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	433 1 83895 . GAGAA G 1472.9 . AB=0.609756;ABP=11.5903;AC=6;AF=0.230769;AN=26;AO=50;CIGAR=1M4D13M;TYPE=del GT:DP:RO:QR:AO:QA:GL 0/1:82:25:926:50:1839:-10,0,-10 .:.:.:.:.:.:. 0/0:30:29:1089:0:0:0,-8.72987,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	434 1 83978 . G A 36.4 . AB=0.25;ABP=13.8677;AC=1;AF=0.0384615;AN=26;AO=5;CIGAR=1X;TYPE=snp;mapq=35;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:99:99:3560:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:27:27:956:0:0:0,-8.12781,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	435 1 83998 . G A 2231.2 . AB=0.252964;ABP=137.118;AC=3;AF=0.115385;AN=26;AO=64;CIGAR=1X1M;TYPE=snp;mapq=35;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/1:99:66:2388:24:845:-10,0,-10 .:.:.:.:.:.:. 0/.:20:6:218:5:149:-10,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	436 1 83998 . G GAAAA 2231.2 . AB=0.258621;ABP=120.42;AC=4;AF=0.153846;AN=26;AO=60;CIGAR=1M4I1M;TYPE=ins;mapq=35;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/.:99:66:2388:9:279:-10,-10,-10 .:.:.:.:.:.:. 0/1:20:6:218:9:315:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	437 1 84002 . G A 2055.1 . AB=0.278571;ABP=122.255;AC=8;AF=0.285714;AN=28;AO=78;CIGAR=1X;TYPE=snp;mapq=35;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/1:110:95:3465:15:537:-10,0,-10 .:.:.:.:.:.:. 0/1:21:14:501:7:247:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	438 1 84026 . GAA G 338.3 . AB=0.758621;ABP=19.8579;AC=7;AF=0.233333;AN=30;AO=31;CIGAR=1M2D1M;TYPE=del;mapq=34.5;coverage=2;xdp2=1,1 GT:DP:RO:QR:AO:QA:GL 0/0:120:119:4285:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:29:27:939:0:0:0,-8.12781,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	439 1 84133 . A T 2789.0 . AB=0.460526;ABP=6.09608;AC=8;AF=0.235294;AN=34;AO=105;CIGAR=1X;TYPE=snp;mapq=29.6667;coverage=3;xdp2=1,2 GT:DP:RO:QR:AO:QA:GL 0/0:91:91:3219:0:0:0,-10,-10 0/0:8:8:310:0:0:0,-2.40824,-10 0/0:43:43:1569:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	440 1 84214 . AT A 31.4 . AB=0.492063;ABP=3.04477;AC=5;AF=0.178571;AN=28;AO=62;CIGAR=1M1D6M;TYPE=del;mapq=27.5;coverage=2;xdp2=0,2 GT:DP:RO:QR:AO:QA:GL 0/0:94:93:3532:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:33:32:1215:1:15:0,-6.91548,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	441 1 84230 . T C 851.5 . AB=0.223958;ABP=130.087;AC=9;AF=0.28125;AN=32;AO=49;CIGAR=1X;TYPE=snp;mapq=15;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:100:100:3771:0:0:0,-10,-10 0/0:1:0:0:1:36:-3.6,-0.30103,0 0/0:32:30:1166:2:74:-0.0925218,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	442 1 84307 . C A 3840.1 . AB=0.348432;ABP=60.2782;AC=19;AF=0.558824;AN=34;AO=144;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:112:110:4158:2:77:0,-10,-10 0/1:3:0:0:3:123:-10,-0.90309,0 0/1:34:27:1051:7:253:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	443 1 85022 . G A 2889.1 . AB=0.378788;ABP=36.701;AC=8;AF=0.235294;AN=34;AO=100;CIGAR=1X;TYPE=snp;mapq=27;coverage=10;xdp2=6,4 GT:DP:RO:QR:AO:QA:GL 0/0:102:100:3656:0:0:0,-10,-10 0/0:9:9:337:0:0:0,-2.70927,-10 0/0:42:42:1546:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	444 1 85150 . G A 100.9 . AB=1;ABP=29.068;AC=4;AF=0.142857;AN=28;AO=26;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:95:95:3612:0:0:0,-10,-10 0/0:1:0:0:1:35:-3.5,-0.30103,0 0/0:46:46:1763:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	445 1 85200 . T C 1.4 . AB=1;ABP=9.52472;AC=1;AF=0.0454545;AN=22;AO=10;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:91:91:3410:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:34:33:1281:1:35:0,-5.20354,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	446 1 87190 . G A 636.0 . AB=0.349206;ABP=15.4532;AC=1;AF=0.0714286;AN=14;AO=22;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:63:41:1446:22:808:-10,0,-10 .:.:.:.:.:.:. 0/0:34:34:1240:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	447 1 88169 . C T 250.5 . AB=0.203125;ABP=52.0041;AC=1;AF=0.0714286;AN=14;AO=13;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:64:51:1877:13:415:-10,0,-10 .:.:.:.:.:.:. 0/0:23:23:790:0:0:0,-6.92369,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	448 1 88338 . G A 610.8 . AB=0.359375;ABP=14.0034;AC=1;AF=0.0625;AN=16;AO=23;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:64:40:1306:23:797:-10,0,-10 .:.:.:.:.:.:. 0/0:20:20:677:0:0:0,-6.0206,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	449 1 88370 . G A 587.5 . AB=0.366667;ABP=12.2752;AC=1;AF=0.0625;AN=16;AO=22;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:60:38:1266:22:763:-10,0,-10 0/0:1:1:37:0:0:0,-0.30103,-3.7 0/0:21:21:766:0:0:0,-6.32163,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	450 1 89946 . A T 487.5 . AB=0;ABP=0;AC=2;AF=0.142857;AN=14;AO=20;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:82:82:3025:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:32:31:1142:1:17:0,-6.42781,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	451 1 91119 . C T 262.4 . AB=0.264151;ABP=28.6173;AC=1;AF=0.0454545;AN=22;AO=14;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:53:39:1297:14:417:-10,0,-10 0/0:2:2:67:0:0:0,-0.60206,-6.365 0/0:23:23:741:0:0:0,-6.92369,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	452 1 91256 . A G 78.3 . AB=0.209302;ABP=34.5724;AC=4;AF=0.166667;AN=24;AO=14;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:56:53:1754:2:82:0,-5.77826,-10 0/0:2:2:76:0:0:0,-0.60206,-7.22 0/0:10:10:353:0:0:0,-3.0103,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	453 1 91268 . G A 125.3 . AB=0.243902;ABP=26.3669;AC=5;AF=0.208333;AN=24;AO=14;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:48:45:1380:2:81:0,-3.58792,-10 0/0:2:2:74:0:0:0,-0.60206,-7.03 0/0:12:12:361:0:0:0,-3.61236,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	454 1 91336 . A T 290.1 . AB=0.444444;ABP=3.73412;AC=2;AF=0.125;AN=16;AO=12;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:26:15:516:11:382:-10,0,-10 0/1:1:0:0:1:33:-3.3,-0.30103,0 0/0:14:14:465:0:0:0,-4.21442,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	455 1 91475 . G A 429.0 . AB=0.357143;ABP=12.937;AC=9;AF=0.45;AN=20;AO=23;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:38:28:964:10:358:-10,0,-10 .:.:.:.:.:.:. 0/1:4:1:5:3:111:-9.86,-0.10206,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	456 1 91486 . GTACA CTACG 46.6 . AB=0.454545;ABP=3.20771;AC=4;AF=0.222222;AN=18;AO=6;CIGAR=1X3M1X;TYPE=complex GT:DP:RO:QR:AO:QA:GL 0/0:25:23:809:1:38:0,-2.26951,-10 .:.:.:.:.:.:. 0/1:1:0:0:1:39:-3.9,-0.30103,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	457 1 91581 . G A 542.8 . AB=0.217391;ABP=18.9659;AC=16;AF=0.8;AN=20;AO=22;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:20:17:579:2:72:-3.17343,0,-10 0/1:1:0:0:1:40:-4,-0.30103,0 1/1:3:0:0:3:104:-9.70667,-0.90309,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	458 1 91731 . G A 1953.5 . AB=0.666667;ABP=12.42;AC=17;AF=0.772727;AN=22;AO=68;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:33:12:443:21:714:-10,0,-10 0/1:1:1:39:0:0:0,-0.30103,-3.9 1/1:10:0:0:10:345:-10,-3.0103,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	459 1 92481 . G A 114.6 . AB=0.27027;ABP=19.9713;AC=6;AF=0.176471;AN=34;AO=11;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:13:13:430:0:0:0,-3.91339,-10 0/1:4:3:116:1:41:-3.49794,0,-10 0/0:6:6:203:0:0:0,-1.80618,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	460 1 92633 . C T 629.6 . AB=0.857143;ABP=34.0313;AC=2;AF=0.0833333;AN=24;AO=25;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:48:48:1571:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:31:31:1001:0:0:0,-9.33193,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	461 1 92654 . T C 65.1 . AB=0.857143;ABP=18.5208;AC=4;AF=0.125;AN=32;AO=26;CIGAR=1X;TYPE=snp;mapq=10;coverage=2;xdp2=2,0 GT:DP:RO:QR:AO:QA:GL 0/0:56:53:1669:3:62:0,-6.62822,-10 0/1:3:0:0:3:59:-5.50667,-0.90309,0 0/0:32:30:975:1:7:0,-7.20557,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	462 1 92858 . G T 807.0 . AB=0;ABP=0;AC=2;AF=0.125;AN=16;AO=29;CIGAR=1X;TYPE=snp;mapq=31;coverage=1;xdp2=0,1 GT:DP:RO:QR:AO:QA:GL 0/0:74:74:2761:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:28:28:1042:0:0:0,-8.42884,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	463 1 92875 . T C 747.8 . AB=0;ABP=0;AC=2;AF=0.0909091;AN=22;AO=29;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:75:75:2750:0:0:0,-10,-10 .:.:.:.:.:.:. 0/0:30:30:1126:0:0:0,-9.0309,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	464 1 92930 . G T 50.1 . AB=0.225806;ABP=23.254;AC=2;AF=0.0625;AN=32;AO=11;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:43:42:1526:1:29:0,-8.41082,-10 0/0:4:4:152:0:0:0,-1.20412,-10 0/0:23:23:800:0:0:0,-6.92369,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	465 1 93757 . C T 61.6 . AB=0.222222;ABP=15.074;AC=1;AF=0.0714286;AN=14;AO=4;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:18:14:516:4:155:-10,0,-10 .:.:.:.:.:.:. 0/0:7:7:253:0:0:0,-2.10721,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	466 1 94260 . G A 57.4 . AB=0.285714;ABP=8.59409;AC=1;AF=0.0333333;AN=30;AO=5;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:45:45:1548:0:0:0,-10,-10 0/1:14:10:376:4:154:-10,0,-10 0/0:12:12:442:0:0:0,-3.61236,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	467 1 94271 . C G 4600.8 . AB=0.560166;ABP=10.5879;AC=18;AF=0.6;AN=30;AO=165;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:47:34:1165:13:490:-10,0,-10 0/1:14:4:156:10:381:-10,0,-10 0/1:13:10:381:3:104:-8.24964,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	468 1 94570 . T G 614.0 . AB=0.328947;ABP=22.325;AC=15;AF=0.441176;AN=34;AO=32;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:14:12:450:2:82:-5.53462,0,-10 0/0:7:6:227:1:29:-1.63789,0,-10 0/0:6:6:214:0:0:0,-1.80618,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	469 1 94699 . G A 22.3 . AB=0.24;ABP=17.6895;AC=3;AF=0.0882353;AN=34;AO=9;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:45:45:1655:0:0:0,-10,-10 0/1:6:4:144:2:72:-6.20991,0,-10 0/0:11:11:414:0:0:0,-3.31133,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	470 1 94725 . C T 51.0 . AB=1;ABP=13.8677;AC=3;AF=0.107143;AN=28;AO=9;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:42:42:1539:0:0:0,-10,-10 0/0:3:3:114:0:0:0,-0.90309,-10 0/0:13:12:474:1:9:0,-1.89945,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	471 1 94819 . C T 316.5 . AB=0.217082;ABP=198.373;AC=6;AF=0.176471;AN=34;AO=101;CIGAR=1X;TYPE=snp;mapq=33.5;coverage=4;xdp2=4,0 GT:DP:RO:QR:AO:QA:GL 0/1:94:76:2505:18:295:-10,0,-10 0/0:22:20:520:2:37:0,-0.744048,-10 0/0:48:39:1379:9:107:-4.52401,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	472 1 94824 . C T 6727.2 . AB=0.423369;ABP=36.6236;AC=17;AF=0.5;AN=34;AO=279;CIGAR=1X;TYPE=snp;mapq=33.5;coverage=4;xdp2=4,0 GT:DP:RO:QR:AO:QA:GL 0/1:107:78:2566:29:706:-10,0,-10 0/1:26:19:535:7:195:-10,0,-10 0/1:48:32:1112:16:437:-10,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	473 1 94861 . G T 35.0 . AB=0.4;ABP=3.87889;AC=1;AF=0.0294118;AN=34;AO=6;CIGAR=1X;TYPE=snp;mapq=37;coverage=1;xdp2=1,0 GT:DP:RO:QR:AO:QA:GL 0/0:56:53:1764:0:0:0,-10,-10 0/1:10:6:174:4:132:-10,0,-10 0/0:24:21:714:0:0:0,-6.32163,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	474 1 94893 . A G 35.0 . AB=1;ABP=11.6962;AC=1;AF=0.0357143;AN=28;AO=15;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:68:68:2470:0:0:0,-10,-10 0/1:4:0:0:4:135:-10,-1.20412,0 0/0:27:25:880:2:23:0,-3.3975,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	475 1 94991 . G A 683.9 . AB=0.351351;ABP=17.2129;AC=2;AF=0.111111;AN=18;AO=26;CIGAR=1X;TYPE=snp;mapq=40.1429;coverage=7;xdp2=3,4 GT:DP:RO:QR:AO:QA:GL 0/1:74:48:1608:26:918:-10,0,-10 .:.:.:.:.:.:. 0/0:26:26:868:0:0:0,-7.82678,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	476 1 95006 . A T 1209.5 . AB=0.274611;ABP=88.1703;AC=16;AF=0.470588;AN=34;AO=71;CIGAR=1X;TYPE=snp;mapq=39;coverage=2;xdp2=1,1 GT:DP:RO:QR:AO:QA:GL 0/0:86:83:2850:3:106:0,-10,-10 0/1:4:0:0:4:152:-10,-1.20412,0 0/1:33:29:1025:4:128:-6.51795,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	477 1 95011 . T G 674.6 . AB=0.47619;ABP=3.94093;AC=12;AF=0.352941;AN=34;AO=111;CIGAR=1X1M;TYPE=snp;mapq=21.6667;coverage=3;xdp2=2,1 GT:DP:RO:QR:AO:QA:GL 0/0:84:79:2791:3:19:0,-10,-10 0/1:10:3:49:6:64:-4.76644,0,-3.48501 0/0:34:29:1054:3:26:0,-3.75548,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	478 1 95054 . G A 201.1 . AB=0.25;ABP=24.725;AC=1;AF=0.0294118;AN=34;AO=10;CIGAR=1X;TYPE=snp;mapq=28.6667;coverage=3;xdp2=1,2 GT:DP:RO:QR:AO:QA:GL 0/0:85:85:2938:0:0:0,-10,-10 0/0:16:16:558:0:0:0,-4.81648,-10 0/0:49:49:1618:0:0:0,-10,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	479 1 95611 . G A 36.8 . AB=0.235294;ABP=13.3567;AC=1;AF=0.0294118;AN=34;AO=4;CIGAR=1X;TYPE=snp;mapq=20;coverage=3;xdp2=3,0 GT:DP:RO:QR:AO:QA:GL 0/0:17:17:620:0:0:0,-5.11751,-10 0/0:2:2:70:0:0:0,-0.60206,-6.65 0/0:7:7:252:0:0:0,-2.10721,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	480 1 96594 . C T 953.0 . AB=0.355556;ABP=19.3205;AC=2;AF=0.111111;AN=18;AO=32;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:90:58:2040:32:1200:-10,0,-10 .:.:.:.:.:.:. 0/0:18:18:623:0:0:0,-5.41854,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	481 1 97164 . A G 353.7 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=12;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 1/1:3:0:0:3:102:-9.52,-0.90309,0 .:.:.:.:.:.:. 1/1:1:0:0:1:35:-3.5,-0.30103,0
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	482 1 97587 . G C 303.7 . AB=0.285714;ABP=19.7617;AC=1;AF=0.05;AN=20;AO=12;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/1:42:30:1120:12:451:-10,0,-10 0/0:1:1:40:0:0:0,-0.30103,-4 0/0:21:21:796:0:0:0,-6.32163,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	483 1 97661 . T C 33.4 . AB=0.3;ABP=6.48466;AC=1;AF=0.0333333;AN=30;AO=5;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:19:18:629:1:41:0,-0.340816,-10 0/0:2:2:74:0:0:0,-0.60206,-7.03 0/0:8:8:292:0:0:0,-2.40824,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	484 1 97937 . T A 12.3 . AB=0.428571;ABP=3.32051;AC=2;AF=0.0588235;AN=34;AO=5;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:26:26:899:0:0:0,-7.82678,-10 0/0:3:3:113:0:0:0,-0.90309,-10 0/0:7:7:248:0:0:0,-2.10721,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	485 1 97953 . A G 1000.6 . AB=0.401709;ABP=12.8283;AC=13;AF=0.382353;AN=34;AO=48;CIGAR=1X;TYPE=snp;mapq=20.5;coverage=2;xdp2=2,0 GT:DP:RO:QR:AO:QA:GL 0/0:32:32:1102:0:0:0,-9.63296,-10 0/1:6:4:155:2:77:-6.68491,0,-10 0/0:10:10:355:0:0:0,-3.0103,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	486 1 98683 . G A 610.5 . AB=0.282443;ABP=56.8661;AC=11;AF=0.34375;AN=32;AO=45;CIGAR=1X;TYPE=snp;AC_AFR=0;AC_AMR=0;AC_EAS=0 GT:DP:RO:QR:AO:QA:GL 0/0:73:71:2641:2:78:0,-10,-10 0/0:1:0:0:1:34:-3.4,-0.30103,0 0/1:33:29:1059:4:139:-7.53545,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	487 1 98688 . G <DEL> 610.5 . CIEND=-4,2;SVLEN=10;AB=0.282443;ABP=56.8661;AC=11;AF=0.34375;AN=32;AO=45;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:73:71:2641:2:78:0,-10,-10 0/0:1:0:0:1:34:-3.4,-0.30103,0 0/1:33:29:1059:4:139:-7.53545,0,-10
fb20fa735dfe "planemo upload for repository https://github.com/galaxyproject/tools-iuc/vcfanno/ commit d962b44c5d3fecd1a315d6fbda8831d6de1b2801" iuc parents: diff changeset	488 2 98688 . G <DEL> 610.5 . CIEND=-4,2;SVLEN=10;AB=0.282443;ABP=56.8661;AC=11;AF=0.34375;AN=32;AO=45;CIGAR=1X;TYPE=snp GT:DP:RO:QR:AO:QA:GL 0/0:73:71:2641:2:78:0,-10,-10 0/0:1:0:0:1:34:-3.4,-0.30103,0 0/1:33:29:1059:4:139:-7.53545,0,-10

Mercurial > repos > iuc > vcfanno

annotate test-data/vcfanno_result.vcf @ 2:4f3c5e634679 draft default tip