Mercurial > repos > iuc > vegan_diversity

comparison vegan_diversity.xml @ 4:a1b80a746054 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vegan/ commit f93edebf6c946402f105f0622aacb0baa216a70c
author iuc
date Fri, 15 Mar 2024 15:26:38 +0000
parents a2c047a2c380
children
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3:a2c047a2c380 4:a1b80a746054
3 index 3 index
4 </description> 4 </description>
5 <macros> 5 <macros>
6 <import>macros.xml</import> 6 <import>macros.xml</import>
7 </macros> 7 </macros>
8 <expand macro="bio.tools_xrefs" />
8 <expand macro="requirements" /> 9 <expand macro="requirements" />
9 <expand macro="stdio" /> 10 <expand macro="stdio" />
10 <expand macro="version_command" /> 11 <expand macro="version_command" />
11 <command> 12 <command>
12 <![CDATA[ 13 <![CDATA[
55 </inputs> 56 </inputs>
56 <outputs> 57 <outputs>
57 <data format="tabular" name="output_diversity_index" /> 58 <data format="tabular" name="output_diversity_index" />
58 </outputs> 59 </outputs>
59 <tests> 60 <tests>
60 <test> 61 <test expect_num_outputs="1">
61 <param name="input_abundance" ftype="tabular" value="vegan_in.tabular"/> 62 <param name="input_abundance" ftype="tabular" value="vegan_in.tabular"/>
62 <param name="species_column" value="6"/> 63 <param name="species_column" value="6"/>
63 <param name="sample_columns" value="2"/> 64 <param name="sample_columns" value="2"/>
64 <param name="index_type_selector" value="shannon"/> 65 <param name="index_type_selector" value="shannon"/>
65 <param name="margin" value="1"/> 66 <param name="margin" value="1"/>
70 <help> 71 <help>
71 <![CDATA[ 72 <![CDATA[
72 Calculate Diversity index using vegan and selected method. 73 Calculate Diversity index using vegan and selected method.
73 ]]> 74 ]]>
74 </help> 75 </help>
75 <citations> 76 <expand macro="citations" />
76 </citations>
77 </tool> 77 </tool>