Mercurial > repos > iuc > vg_deconstruct
comparison test-data/x.gfa @ 0:a347dad1f305 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vg commit fc3deb5bce07a12b7f9bbd380118a7d2230a1003"
author | iuc |
---|---|
date | Thu, 09 Apr 2020 04:36:41 -0400 |
parents | |
children |
comparison
equal
deleted
inserted
replaced
-1:000000000000 | 0:a347dad1f305 |
---|---|
1 H VN:Z:1.0 | |
2 S 56 ATTAGCCATGTGACTTTGAACAAGTTAGTTAA | |
3 S 35 A | |
4 S 110 TCATTGTCAAC | |
5 S 60 T | |
6 S 30 ACGTTTGACAATCTATCAC | |
7 S 6 TTG | |
8 S 67 T | |
9 S 215 A | |
10 S 73 A | |
11 S 182 CTGCTCTCTT | |
12 S 164 G | |
13 S 115 ACATTAGGA | |
14 S 153 T | |
15 S 112 ACAGTCAACGCTCAATACAAGG | |
16 S 185 TTGTCAGATC | |
17 S 64 A | |
18 S 186 G | |
19 S 90 GAGGAAAGCCTCTGACAACTGGT | |
20 S 139 GGGCAC | |
21 S 4 T | |
22 S 13 A | |
23 S 86 C | |
24 S 168 A | |
25 S 207 CAAA | |
26 S 104 TCCTTG | |
27 S 183 A | |
28 S 52 A | |
29 S 177 T | |
30 S 12 ATAT | |
31 S 179 TGTCCAGGAATGAACC | |
32 S 75 A | |
33 S 23 T | |
34 S 111 A | |
35 S 41 TGGAGCCA | |
36 S 43 G | |
37 S 11 T | |
38 S 68 GGAGAT | |
39 S 171 G | |
40 S 69 C | |
41 S 82 G | |
42 S 85 G | |
43 S 130 TTGTGT | |
44 S 119 G | |
45 S 125 T | |
46 S 39 C | |
47 S 77 A | |
48 S 126 G | |
49 S 108 C | |
50 S 71 AT | |
51 S 66 C | |
52 S 103 C | |
53 S 156 C | |
54 S 59 G | |
55 S 172 CTGCTCTTTCCCTCAATTGTTCATTTGTCT | |
56 S 208 T | |
57 S 2 A | |
58 S 10 A | |
59 S 27 CTTTGATTTATTTGAAGT | |
60 S 26 T | |
61 S 211 GG | |
62 S 124 TAAGACCCAGAGGGCTCACCCAGAGTCGAG | |
63 S 144 T | |
64 S 127 CTCAAGGACAGCTCTCC | |
65 S 116 A | |
66 S 100 T | |
67 S 79 TTTGCTGTGAAGATTAAATTAGGTGATGCTTG | |
68 S 200 C | |
69 S 20 TGCTATGTGTAACTAGTAATGGTAATGGATAT | |
70 S 81 T | |
71 S 195 A | |
72 S 141 T | |
73 S 187 A | |
74 S 213 A | |
75 S 135 T | |
76 S 9 AAATTTTCTGGAGTTCTAT | |
77 S 189 A | |
78 S 138 T | |
79 S 109 T | |
80 S 161 T | |
81 S 107 GGCTCTTCTGGCTT | |
82 S 46 T | |
83 S 57 TCTCTCTGAACTTCAGTT | |
84 S 152 GCTCTCCTTGTCCCTCC | |
85 S 170 C | |
86 S 88 C | |
87 S 129 T | |
88 S 209 G | |
89 S 120 CTCTGCTCACCG | |
90 S 78 G | |
91 S 133 CAGAGTGTATACGA | |
92 S 72 G | |
93 S 24 TT | |
94 S 8 G | |
95 S 184 C | |
96 S 37 A | |
97 S 1 CAAATAAG | |
98 S 137 TAACTCTGTTC | |
99 S 22 C | |
100 S 83 A | |
101 S 154 C | |
102 S 190 C | |
103 S 201 T | |
104 S 99 C | |
105 S 121 C | |
106 S 206 C | |
107 S 14 T | |
108 S 33 AGGGGTAATGTGGGGAA | |
109 S 40 T | |
110 S 113 A | |
111 S 174 T | |
112 S 165 A | |
113 S 142 GGTGAAAGA | |
114 S 5 C | |
115 S 55 T | |
116 S 114 G | |
117 S 123 GATCTTCAAGTTTGAAAATTGCATCTCAAATC | |
118 S 32 T | |
119 S 136 G | |
120 S 117 T | |
121 S 45 C | |
122 S 145 AACAGAGGAAATGCC | |
123 S 197 T | |
124 S 196 AGGGC | |
125 S 210 CTACCCAGGCCATTTTAAGTTTCCTGT | |
126 S 151 A | |
127 S 54 G | |
128 S 63 C | |
129 S 191 TTCTCATCCCTCCT | |
130 S 91 G | |
131 S 62 ATT | |
132 S 205 TACTCCACAT | |
133 S 158 GATCTCTTCACT | |
134 S 150 T | |
135 S 176 C | |
136 S 122 T | |
137 S 58 C | |
138 S 199 T | |
139 S 28 A | |
140 S 173 C | |
141 S 148 GGCTTTTTATCAGAACATGTTTCCAAGCTTAT | |
142 S 188 G | |
143 S 92 A | |
144 S 36 TGGAAAGAATAC | |
145 S 98 TA | |
146 S 204 C | |
147 S 118 TGGCAGTAGCTCAGAGATCT | |
148 S 162 C | |
149 S 84 AAGCT | |
150 S 7 A | |
151 S 25 C | |
152 S 203 G | |
153 S 95 TTACTG | |
154 S 76 G | |
155 S 34 G | |
156 S 50 TCCTCACTTTGCC | |
157 S 93 A | |
158 S 18 TCCTGG | |
159 S 194 G | |
160 S 147 T | |
161 S 42 T | |
162 S 87 AGGGAATAGTGCCTGGCAT | |
163 S 132 C | |
164 S 140 C | |
165 S 157 A | |
166 S 167 G | |
167 S 169 GAA | |
168 S 202 TAA | |
169 S 16 G | |
170 S 180 G | |
171 S 160 GCCT | |
172 S 19 T | |
173 S 49 A | |
174 S 44 ACAAATCTGGGT | |
175 S 31 C | |
176 S 146 G | |
177 S 74 CTACTGACAGCAGA | |
178 S 106 A | |
179 S 61 A | |
180 S 29 G | |
181 S 94 G | |
182 S 212 ACTAAGGACAAAGGTGCGGGGAGAT | |
183 S 102 GAAACATTTGGCTATTGACCTCTTTC | |
184 S 128 C | |
185 S 159 G | |
186 S 70 G | |
187 S 21 GTTGGGCTT | |
188 S 193 C | |
189 S 38 AAGAT | |
190 S 163 TTATCTTTACTGTTACC | |
191 S 131 T | |
192 S 192 T | |
193 S 101 TTACTATGAATCCTCACCTTCCTTGACTTCTT | |
194 S 105 G | |
195 S 17 T | |
196 S 53 CA | |
197 S 47 CAA | |
198 S 175 A | |
199 S 166 AATCTTTCC | |
200 S 89 A | |
201 S 214 G | |
202 S 198 C | |
203 S 3 G | |
204 S 80 TGA | |
205 S 96 C | |
206 S 51 G | |
207 S 178 A | |
208 S 149 CCCTTTTCCC | |
209 S 155 A | |
210 S 181 A | |
211 S 143 A | |
212 S 48 G | |
213 S 15 CCAACTCTCTGG | |
214 S 65 TCTCTAATA | |
215 S 97 T | |
216 S 134 A | |
217 P x 1+,3+,5+,6+,8+,9+,11+,12+,14+,15+,17+,18+,20+,21+,23+,24+,26+,27+,29+,30+,32+,33+,35+,36+,38+,40+,41+,43+,44+,46+,47+,49+,50+,52+,53+,55+,56+,57+,60+,61+,62+,64+,65+,67+,68+,70+,71+,73+,74+,76+,78+,79+,81+,83+,84+,86+,87+,89+,90+,92+,94+,95+,97+,98+,100+,101+,102+,103+,104+,106+,107+,109+,110+,112+,114+,115+,117+,118+,120+,122+,123+,124+,126+,127+,129+,130+,132+,133+,135+,136+,137+,139+,141+,142+,144+,145+,147+,148+,149+,151+,152+,154+,155+,157+,158+,159+,160+,162+,163+,165+,166+,168+,169+,171+,172+,174+,176+,177+,179+,181+,182+,184+,185+,187+,188+,190+,191+,193+,195+,196+,198+,199+,201+,202+,204+,205+,206+,207+,209+,210+,211+,212+,214+,215+ 8M,1M,1M,3M,1M,19M,1M,4M,1M,12M,1M,6M,32M,9M,1M,2M,1M,18M,1M,19M,1M,17M,1M,12M,5M,1M,8M,1M,12M,1M,3M,1M,13M,1M,2M,1M,32M,18M,1M,1M,3M,1M,9M,1M,6M,1M,2M,1M,14M,1M,1M,32M,1M,1M,5M,1M,19M,1M,23M,1M,1M,6M,1M,2M,1M,32M,26M,1M,6M,1M,14M,1M,11M,22M,1M,9M,1M,20M,12M,1M,32M,30M,1M,17M,1M,6M,1M,14M,1M,1M,11M,6M,1M,9M,1M,15M,1M,32M,10M,1M,17M,1M,1M,1M,12M,1M,4M,1M,17M,1M,9M,1M,3M,1M,30M,1M,1M,1M,16M,1M,10M,1M,10M,1M,1M,1M,14M,1M,1M,5M,1M,1M,1M,3M,1M,10M,1M,4M,1M,27M,2M,25M,1M,1M | |
218 L 56 + 57 + 0M | |
219 L 35 + 36 + 0M | |
220 L 110 + 111 + 0M | |
221 L 110 + 112 + 0M | |
222 L 60 + 61 + 0M | |
223 L 30 + 31 + 0M | |
224 L 30 + 32 + 0M | |
225 L 6 + 7 + 0M | |
226 L 6 + 8 + 0M | |
227 L 67 + 68 + 0M | |
228 L 73 + 74 + 0M | |
229 L 182 + 183 + 0M | |
230 L 182 + 184 + 0M | |
231 L 164 + 166 + 0M | |
232 L 115 + 116 + 0M | |
233 L 115 + 117 + 0M | |
234 L 153 + 155 + 0M | |
235 L 112 + 113 + 0M | |
236 L 112 + 114 + 0M | |
237 L 185 + 186 + 0M | |
238 L 185 + 187 + 0M | |
239 L 64 + 65 + 0M | |
240 L 186 + 188 + 0M | |
241 L 90 + 91 + 0M | |
242 L 90 + 92 + 0M | |
243 L 139 + 140 + 0M | |
244 L 139 + 141 + 0M | |
245 L 4 + 6 + 0M | |
246 L 13 + 15 + 0M | |
247 L 86 + 87 + 0M | |
248 L 168 + 169 + 0M | |
249 L 207 + 208 + 0M | |
250 L 207 + 209 + 0M | |
251 L 104 + 105 + 0M | |
252 L 104 + 106 + 0M | |
253 L 183 + 185 + 0M | |
254 L 52 + 53 + 0M | |
255 L 177 + 178 + 0M | |
256 L 177 + 179 + 0M | |
257 L 12 + 13 + 0M | |
258 L 12 + 14 + 0M | |
259 L 179 + 180 + 0M | |
260 L 179 + 181 + 0M | |
261 L 75 + 77 + 0M | |
262 L 75 + 78 + 0M | |
263 L 23 + 24 + 0M | |
264 L 111 + 112 + 0M | |
265 L 41 + 42 + 0M | |
266 L 41 + 43 + 0M | |
267 L 43 + 44 + 0M | |
268 L 11 + 12 + 0M | |
269 L 68 + 69 + 0M | |
270 L 68 + 70 + 0M | |
271 L 171 + 172 + 0M | |
272 L 69 + 71 + 0M | |
273 L 82 + 84 + 0M | |
274 L 85 + 87 + 0M | |
275 L 130 + 131 + 0M | |
276 L 130 + 132 + 0M | |
277 L 119 + 120 + 0M | |
278 L 125 + 127 + 0M | |
279 L 39 + 41 + 0M | |
280 L 77 + 79 + 0M | |
281 L 126 + 127 + 0M | |
282 L 108 + 110 + 0M | |
283 L 71 + 72 + 0M | |
284 L 71 + 73 + 0M | |
285 L 66 + 68 + 0M | |
286 L 103 + 104 + 0M | |
287 L 156 + 158 + 0M | |
288 L 59 + 62 + 0M | |
289 L 60 + 59 + 0M | |
290 L 172 + 173 + 0M | |
291 L 172 + 174 + 0M | |
292 L 208 + 210 + 0M | |
293 L 2 + 4 + 0M | |
294 L 2 + 5 + 0M | |
295 L 10 + 12 + 0M | |
296 L 27 + 28 + 0M | |
297 L 27 + 29 + 0M | |
298 L 26 + 27 + 0M | |
299 L 211 + 212 + 0M | |
300 L 124 + 125 + 0M | |
301 L 124 + 126 + 0M | |
302 L 144 + 145 + 0M | |
303 L 127 + 128 + 0M | |
304 L 127 + 129 + 0M | |
305 L 116 + 118 + 0M | |
306 L 100 + 101 + 0M | |
307 L 79 + 80 + 0M | |
308 L 79 + 81 + 0M | |
309 L 200 + 202 + 0M | |
310 L 20 + 21 + 0M | |
311 L 81 + 82 + 0M | |
312 L 81 + 83 + 0M | |
313 L 195 + 196 + 0M | |
314 L 141 + 142 + 0M | |
315 L 187 + 188 + 0M | |
316 L 213 + 215 + 0M | |
317 L 135 + 136 + 0M | |
318 L 135 + 137 + 0M | |
319 L 9 + 10 + 0M | |
320 L 9 + 11 + 0M | |
321 L 189 + 191 + 0M | |
322 L 138 + 139 + 0M | |
323 L 109 + 110 + 0M | |
324 L 161 + 163 + 0M | |
325 L 107 + 108 + 0M | |
326 L 107 + 109 + 0M | |
327 L 46 + 47 + 0M | |
328 L 57 + 58 + 0M | |
329 L 57 + 60 + 0M | |
330 L 152 + 153 + 0M | |
331 L 152 + 154 + 0M | |
332 L 170 + 172 + 0M | |
333 L 88 + 90 + 0M | |
334 L 129 + 130 + 0M | |
335 L 209 + 210 + 0M | |
336 L 120 + 121 + 0M | |
337 L 120 + 122 + 0M | |
338 L 78 + 79 + 0M | |
339 L 133 + 134 + 0M | |
340 L 133 + 135 + 0M | |
341 L 72 + 74 + 0M | |
342 L 24 + 25 + 0M | |
343 L 24 + 26 + 0M | |
344 L 8 + 9 + 0M | |
345 L 184 + 185 + 0M | |
346 L 37 + 38 + 0M | |
347 L 1 + 2 + 0M | |
348 L 1 + 3 + 0M | |
349 L 137 + 138 + 0M | |
350 L 137 + 139 + 0M | |
351 L 22 + 24 + 0M | |
352 L 83 + 84 + 0M | |
353 L 154 + 155 + 0M | |
354 L 190 + 191 + 0M | |
355 L 201 + 202 + 0M | |
356 L 99 + 101 + 0M | |
357 L 121 + 123 + 0M | |
358 L 206 + 207 + 0M | |
359 L 14 + 15 + 0M | |
360 L 33 + 34 + 0M | |
361 L 33 + 35 + 0M | |
362 L 40 + 41 + 0M | |
363 L 113 + 115 + 0M | |
364 L 174 + 175 + 0M | |
365 L 174 + 176 + 0M | |
366 L 165 + 166 + 0M | |
367 L 142 + 143 + 0M | |
368 L 142 + 144 + 0M | |
369 L 5 + 6 + 0M | |
370 L 55 + 56 + 0M | |
371 L 114 + 115 + 0M | |
372 L 123 + 124 + 0M | |
373 L 32 + 33 + 0M | |
374 L 136 + 137 + 0M | |
375 L 117 + 118 + 0M | |
376 L 45 + 47 + 0M | |
377 L 145 + 146 + 0M | |
378 L 145 + 147 + 0M | |
379 L 197 + 199 + 0M | |
380 L 196 + 197 + 0M | |
381 L 196 + 198 + 0M | |
382 L 210 + 211 + 0M | |
383 L 210 + 212 + 0M | |
384 L 151 + 152 + 0M | |
385 L 54 + 56 + 0M | |
386 L 63 + 65 + 0M | |
387 L 191 + 192 + 0M | |
388 L 191 + 193 + 0M | |
389 L 91 + 93 + 0M | |
390 L 91 + 94 + 0M | |
391 L 62 + 63 + 0M | |
392 L 62 + 64 + 0M | |
393 L 205 + 206 + 0M | |
394 L 205 + 207 + 0M | |
395 L 158 + 159 + 0M | |
396 L 158 + 160 + 0M | |
397 L 150 + 152 + 0M | |
398 L 176 + 177 + 0M | |
399 L 122 + 123 + 0M | |
400 L 58 + 59 + 0M | |
401 L 58 + 61 + 0M | |
402 L 199 + 200 + 0M | |
403 L 199 + 201 + 0M | |
404 L 28 + 30 + 0M | |
405 L 173 + 175 + 0M | |
406 L 173 + 176 + 0M | |
407 L 148 + 149 + 0M | |
408 L 188 + 189 + 0M | |
409 L 188 + 190 + 0M | |
410 L 92 + 93 + 0M | |
411 L 92 + 94 + 0M | |
412 L 36 + 37 + 0M | |
413 L 36 + 38 + 0M | |
414 L 98 + 99 + 0M | |
415 L 98 + 100 + 0M | |
416 L 204 + 205 + 0M | |
417 L 118 + 119 + 0M | |
418 L 118 + 120 + 0M | |
419 L 162 + 163 + 0M | |
420 L 84 + 85 + 0M | |
421 L 84 + 86 + 0M | |
422 L 7 + 9 + 0M | |
423 L 25 + 27 + 0M | |
424 L 203 + 205 + 0M | |
425 L 95 + 96 + 0M | |
426 L 95 + 97 + 0M | |
427 L 76 + 77 + 0M | |
428 L 76 + 78 + 0M | |
429 L 34 + 36 + 0M | |
430 L 50 + 51 + 0M | |
431 L 50 + 52 + 0M | |
432 L 93 + 95 + 0M | |
433 L 18 + 19 + 0M | |
434 L 18 + 20 + 0M | |
435 L 194 + 196 + 0M | |
436 L 147 + 148 + 0M | |
437 L 42 + 44 + 0M | |
438 L 87 + 88 + 0M | |
439 L 87 + 89 + 0M | |
440 L 132 + 133 + 0M | |
441 L 140 + 142 + 0M | |
442 L 157 + 158 + 0M | |
443 L 167 + 169 + 0M | |
444 L 169 + 170 + 0M | |
445 L 169 + 171 + 0M | |
446 L 202 + 203 + 0M | |
447 L 202 + 204 + 0M | |
448 L 16 + 18 + 0M | |
449 L 180 + 182 + 0M | |
450 L 160 + 161 + 0M | |
451 L 160 + 162 + 0M | |
452 L 19 + 20 + 0M | |
453 L 49 + 50 + 0M | |
454 L 44 + 45 + 0M | |
455 L 44 + 46 + 0M | |
456 L 31 + 33 + 0M | |
457 L 146 + 148 + 0M | |
458 L 74 + 75 + 0M | |
459 L 74 + 76 + 0M | |
460 L 106 + 107 + 0M | |
461 L 61 + 62 + 0M | |
462 L 29 + 30 + 0M | |
463 L 94 + 95 + 0M | |
464 L 212 + 213 + 0M | |
465 L 212 + 214 + 0M | |
466 L 102 + 103 + 0M | |
467 L 102 + 104 + 0M | |
468 L 128 + 130 + 0M | |
469 L 159 + 160 + 0M | |
470 L 70 + 71 + 0M | |
471 L 21 + 22 + 0M | |
472 L 21 + 23 + 0M | |
473 L 193 + 194 + 0M | |
474 L 193 + 195 + 0M | |
475 L 38 + 39 + 0M | |
476 L 38 + 40 + 0M | |
477 L 163 + 164 + 0M | |
478 L 163 + 165 + 0M | |
479 L 131 + 133 + 0M | |
480 L 192 + 194 + 0M | |
481 L 192 + 195 + 0M | |
482 L 101 + 102 + 0M | |
483 L 105 + 107 + 0M | |
484 L 17 + 18 + 0M | |
485 L 53 + 54 + 0M | |
486 L 53 + 55 + 0M | |
487 L 47 + 48 + 0M | |
488 L 47 + 49 + 0M | |
489 L 175 + 177 + 0M | |
490 L 166 + 167 + 0M | |
491 L 166 + 168 + 0M | |
492 L 89 + 90 + 0M | |
493 L 214 + 215 + 0M | |
494 L 198 + 199 + 0M | |
495 L 3 + 4 + 0M | |
496 L 3 + 5 + 0M | |
497 L 80 + 81 + 0M | |
498 L 96 + 98 + 0M | |
499 L 51 + 53 + 0M | |
500 L 178 + 179 + 0M | |
501 L 149 + 150 + 0M | |
502 L 149 + 151 + 0M | |
503 L 155 + 156 + 0M | |
504 L 155 + 157 + 0M | |
505 L 181 + 182 + 0M | |
506 L 143 + 145 + 0M | |
507 L 48 + 50 + 0M | |
508 L 15 + 16 + 0M | |
509 L 15 + 17 + 0M | |
510 L 65 + 66 + 0M | |
511 L 65 + 67 + 0M | |
512 L 97 + 98 + 0M | |
513 L 134 + 135 + 0M |