view test-data/hla_variants.vcf @ 1:ee62774bb5bd draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vg commit b991ebbd9f59ffff1b3eae09f65b59b02ad7cf8e
author iuc
date Thu, 23 Jun 2022 07:46:02 +0000
parents 95ec8f978762
children
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##fileformat=VCFv4.2
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##contig=<ID=gi|568815592:29791752-29792749,length=998>
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	gi|157734152:29563108-29564082	gi|528476637:29761569-29762543	gi|568815454:1057585-1058559	gi|568815529:1275535-1276509	gi|568815551:1054737-1055734	gi|568815561:1054328-1055325	gi|568815564:1054403-1055400	gi|568815567:1054737-1055711	gi|568815569:1097903-1098900
gi|568815592:29791752-29792749	92	.	G	A	23	.	.	GT	1	1	1	1	0	0	0	1	0
gi|568815592:29791752-29792749	105	.	C	T	23	.	.	GT	1	1	1	1	0	0	0	1	0
gi|568815592:29791752-29792749	151	.	CAG	C	23	.	.	GT	1	1	1	1	0	0	0	1	0
gi|568815592:29791752-29792749	160	.	A	G	23	.	.	GT	1	1	1	1	0	0	0	1	0
gi|568815592:29791752-29792749	222	.	G	A	23	.	.	GT	1	1	1	1	0	0	0	1	0
gi|568815592:29791752-29792749	283	.	C	G	23	.	.	GT	1	1	1	1	0	0	0	1	0
gi|568815592:29791752-29792749	295	.	TT	CC	23	.	.	GT	1	1	1	1	0	0	0	1	0
gi|568815592:29791752-29792749	348	.	G	A	23	.	.	GT	1	1	1	1	0	0	0	1	0
gi|568815592:29791752-29792749	357	.	G	A	23	.	.	GT	1	1	1	1	0	0	0	1	0
gi|568815592:29791752-29792749	395	.	T	C	23	.	.	GT	1	1	1	1	0	0	0	1	0
gi|568815592:29791752-29792749	468	.	T	C	23	.	.	GT	1	1	1	1	0	0	0	1	0
gi|568815592:29791752-29792749	583	.	G	C	23	.	.	GT	1	1	1	1	0	0	0	1	0
gi|568815592:29791752-29792749	621	.	G	T	23	.	.	GT	0	1	0	0	0	0	0	1	0
gi|568815592:29791752-29792749	660	.	G	A	23	.	.	GT	1	1	1	1	0	0	0	1	0
gi|568815592:29791752-29792749	824	.	CGCGGGCGCCGTGGATGGAGCA	C	23	.	.	GT	1	1	1	1	0	0	0	1	0
gi|568815592:29791752-29792749	982	.	G	A	23	.	.	GT	1	1	1	1	0	0	0	1	0
gi|568815592:29791752-29792749	995	.	C	T	23	.	.	GT	1	1	1	1	0	0	0	1	0