Mercurial > repos > iuc > virannot_blast2tsv

diff virAnnot_blast2tsv.xml @ 2:77c3ef9b0ed7 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/virAnnot commit ab5e1189217b6ed5f1c5d7c5ff6b79b6a4c18cff
author iuc
date Wed, 21 Aug 2024 13:13:39 +0000
parents 88ebde55bef8
children f8ebd1e802d7
line wrap: on
line diff
--- a/virAnnot_blast2tsv.xml	Sat May 18 18:14:54 2024 +0000
+++ b/virAnnot_blast2tsv.xml	Wed Aug 21 13:13:39 2024 +0000
@@ -1,4 +1,4 @@
-<tool id="virannot_blast2tsv" name="virAnnot Blast2tsv" version="1.0.0+galaxy0" profile="21.05">
+<tool id="virannot_blast2tsv" name="virAnnot Blast2tsv" version="1.0.1+galaxy0" profile="21.05">
     <description>convert XML blast results to tabular file with taxonomic informations</description>
     <macros>
         <import>macros.xml</import>
@@ -51,18 +51,8 @@
             <output name="out_annotation" file="blast2tsv_output.tab">
                 <assert_contents>
                     <has_n_columns n="16" />
-                    <has_n_lines n="6" />
-                </assert_contents>
-            </output>
-        </test>
-        <test>
-            <param name="blast_xml" value="blast2tsv_input.xml"/>
-            <param name="contigs" value="blast2tsv_contigs.fa"/>
-            <param name="blast_type" value="TBLASTX"/>
-            <param name="max_evalue" value="0.001"/>
-            <output name="out_annotation" file="blast2tsv_output.tab">
-                <assert_contents>
-                    <has_text text="NC_011554" />
+                    <has_n_lines n="13" />
+                    <has_text text="NODE_13_length_295_cov_0.945833" />
                 </assert_contents>
             </output>
         </test>
@@ -74,12 +64,14 @@
             <param name="read_nb" value="blast2tsv_read_nb.tab"/>
             <output name="out_annotation" file="blast2tsv_output_with_rn.tab">
                 <assert_contents>
-                    <has_text text="402" />
+                    <has_text text="pfam13603" />
+                    <has_n_lines n="13" />
                 </assert_contents>
             </output>
             <output name="out_annotation" file="blast2tsv_reads_with_rn.txt">
                 <assert_contents>
-                    <has_text text="8" />
+                    <has_text text="Desulfovibrio" />
+                    <has_n_lines n="13" />
                 </assert_contents>
             </output>
         </test>