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diff tool-data/virhunter.loc.sample @ 2:ea2cccb9f73e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/VirHunter commit c3685ed6a70b47012b62b95a2a3db062bd3b7475
author iuc
date Thu, 05 Jan 2023 14:27:54 +0000
parents 457fd8fd681a
children
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--- a/tool-data/virhunter.loc.sample	Wed Nov 30 17:31:52 2022 +0000
+++ b/tool-data/virhunter.loc.sample	Thu Jan 05 14:27:54 2023 +0000
@@ -1,29 +1,27 @@
 #This is a sample file distributed with Galaxy that enables tools
-#to use a directory of Samtools indexed sequences data files.  You will need
-#to create these data files and then create a fasta_indexes.loc file
+#to use a directory of virhunter hdf5 model files.  You will need
+#to create these data files and then create a virhunter.loc file
 #similar to this one (store it in this directory) that points to
-#the directories in which those files are stored. The fasta_indexes.loc
+#the directories in which those files are stored. The virhunter.loc
 #file has this format (white space characters are TAB characters):
 #
-# <unique_build_id>	<dbkey>	<display_name>	<file_base_path>
+# <value>	<name>	<path>
 #
-#So, for example, if you had hg19 Canonical indexed stored in
+#So, for example, if you had fungi hdf5 model files  stored in
 #
-# /depot/data2/galaxy/hg19/sam/,
+# /tool-data/weights/peach/,
 #
-#then the fasta_indexes.loc entry would look like this:
+#then the virhunter.loc entry would look like this:
 #
-#hg19canon	hg19	Human (Homo sapiens): hg19 Canonical	/depot/data2/galaxy/hg19/sam/hg19canon.fa
+#peach	peach	/data/databases/path/weights/peach
 #
-#and your /depot/data2/galaxy/hg19/sam/ directory
-#would contain hg19canon.fa and hg19canon.fa.fai files.
+#and your /tool-data/weights/peach/ directory
+#would contain model_5_500.h5,model_7_500.h5,model_10_500.h5 and model_5_1000.h5, model_7_1000.h5, model_10_1000.h5 files.
 #
-#Your fasta_indexes.loc file should include an entry per line for
+#Your virhunter.loc file should include an entry per line for
 #each index set you have stored.  The file in the path does actually
 #exist, but it should never be directly used. Instead, the name serves
 #as a prefix for the index file.  For example:
 #
-#hg18canon	hg18	Human (Homo sapiens): hg18 Canonical	/depot/data2/galaxy/hg18/sam/hg18canon.fa
-#hg18full	hg18	Human (Homo sapiens): hg18 Full	/depot/data2/galaxy/hg18/sam/hg18full.fa
-#hg19canon	hg19	Human (Homo sapiens): hg19 Canonical	/depot/data2/galaxy/hg19/sam/hg19canon.fa
-#hg19full	hg19	Human (Homo sapiens): hg19 Full	/depot/data2/galaxy/hg19/sam/hg19full.fa
\ No newline at end of file
+#peach	peach	/data/databases/path/weights/peach
+#grapevine	grapevine	/data/databases/path/weights/peach