Mercurial > repos > iuc > virhunter
diff virhunter.xml @ 2:ea2cccb9f73e draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/VirHunter commit c3685ed6a70b47012b62b95a2a3db062bd3b7475
author | iuc |
---|---|
date | Thu, 05 Jan 2023 14:27:54 +0000 |
parents | 457fd8fd681a |
children | 302332b914ef |
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--- a/virhunter.xml Wed Nov 30 17:31:52 2022 +0000 +++ b/virhunter.xml Thu Jan 05 14:27:54 2023 +0000 @@ -1,6 +1,6 @@ <tool id="virhunter" name="virhunter" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="20.05"> <description> - Deep learning method to identify viruses in sequencing datasets.. + Deep learning method to identify viruses in sequencing datasets </description> <macros> <import>macros.xml</import> @@ -24,7 +24,7 @@ ]]></command> <inputs> - <param name="fasta_file" type="data" format="fasta" label="DNA FASTA file(s)"/> + <param name="fasta_file" type="data" format="fasta" label="DNA FASTA file"/> <param name="weights" type="select" label="Select a reference model" help="If your model of interest is not listed, contact the Galaxy team"> <options from_data_table="virhunter_models"> <validator type="no_options" message="No models are available for the selected input dataset" /> @@ -49,7 +49,8 @@ <help> <![CDATA[ - VirHunter is a deep learning method that uses Convolutional Neural Networks (CNNs) and a Random Forest Classifier to identify viruses in sequening datasets. More precisely, VirHunter classifies previously assembled contigs as viral, host and bacterial (contamination). + VirHunter is a tool that uses deep learning to identify viruses in plant virome sequencing datasets. + In particular, VirHunter classifies previously assembled contigs into virus, host and bacteria classes. ]]></help> <expand macro="citations" /> </tool> \ No newline at end of file