Mercurial > repos > iuc > vsnp_add_zero_coverage

comparison vsnp_add_zero_coverage.xml @ 4:e12ccc57875c draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vsnp commit a80e3713d10fafef22e964198d59251adf955812"
author iuc
date Thu, 14 Jan 2021 09:11:12 +0000
parents 2e863710a2f0
children 5a5cf6f024bf
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3:2e863710a2f0 4:e12ccc57875c
1 <tool id="vsnp_add_zero_coverage" name="vSNP: add zero coverage" version="@WRAPPER_VERSION@.1" profile="@PROFILE@"> 1 <tool id="vsnp_add_zero_coverage" name="vSNP: add zero coverage" version="@WRAPPER_VERSION@.2" profile="@PROFILE@">
2 <description></description> 2 <description></description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <requirements> 6 <requirements>
35 <conditional name="reference_cond"> 35 <conditional name="reference_cond">
36 <expand macro="param_reference_source"/> 36 <expand macro="param_reference_source"/>
37 <when value="cached"> 37 <when value="cached">
38 <param name="reference" type="select" label="Using reference genome"> 38 <param name="reference" type="select" label="Using reference genome">
39 <options from_data_table="fasta_indexes"> 39 <options from_data_table="fasta_indexes">
40 <filter type="data_meta" column="dbkey" key="dbkey" ref="bam_input"/> 40 <filter type="data_meta" column="1" key="dbkey" ref="bam_input"/>
41 <validator type="no_options" message="A built-in reference genome is not available for the build associated with the selected BAM file"/> 41 <validator type="no_options" message="A built-in reference genome is not available for the build associated with the selected BAM file"/>
42 </options> 42 </options>
43 </param> 43 </param>
44 </when> 44 </when>
45 <when value="history"> 45 <when value="history">