Mercurial > repos > iuc > vsnp_build_tables
diff test-data/01_1787_FL_Zoo_Jaguar.vcf @ 8:e54b96acea98 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vsnp commit 95b221f68d19702681babd765c67caeeb24e7f1d"
| author | iuc |
|---|---|
| date | Tue, 16 Nov 2021 08:29:11 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/01_1787_FL_Zoo_Jaguar.vcf Tue Nov 16 08:29:11 2021 +0000 @@ -0,0 +1,3765 @@ +##fileformat=VCFv4.2 +##FILTER=<ID=LowQual,Description="Low quality"> +##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed"> +##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth (reads with MQ=255 or with bad mates are filtered)"> +##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality"> +##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> +##FORMAT=<ID=PL,Number=G,Type=Integer,Description="Normalized, Phred-scaled likelihoods for genotypes as defined in the VCF specification"> +##GATKCommandLine.HaplotypeCaller=<ID=HaplotypeCaller,Version=3.8-0-ge9d806836,Date="Fri Dec 22 16:41:19 CST 2017",Epoch=1513982479531,CommandLineOptions="analysis_type=HaplotypeCaller input_file=[/scratch/analysis_staging/a_script/bovis_reanalysis_af2122_2017-12-14/2001-2008/01-1787/01-1787-quality.bam] showFullBamList=false read_buffer_size=null read_filter=[] disable_read_filter=[] intervals=null excludeIntervals=null interval_set_rule=UNION interval_merging=ALL interval_padding=0 reference_sequence=/scratch/analysis_staging/a_script/bovis_reanalysis_af2122_2017-12-14/2001-2008/01-1787/NC_002945v4.fasta nonDeterministicRandomSeed=false disableDithering=false maxRuntime=-1 maxRuntimeUnits=MINUTES downsampling_type=BY_SAMPLE downsample_to_fraction=null downsample_to_coverage=500 baq=OFF baqGapOpenPenalty=40.0 refactor_NDN_cigar_string=false fix_misencoded_quality_scores=false allow_potentially_misencoded_quality_scores=false useOriginalQualities=false defaultBaseQualities=-1 performanceLog=null BQSR=null quantize_quals=0 static_quantized_quals=null round_down_quantized=false disable_indel_quals=false emit_original_quals=false preserve_qscores_less_than=6 globalQScorePrior=-1.0 secondsBetweenProgressUpdates=10 validation_strictness=SILENT remove_program_records=false keep_program_records=false sample_rename_mapping_file=null unsafe=null use_jdk_deflater=false use_jdk_inflater=false disable_auto_index_creation_and_locking_when_reading_rods=false no_cmdline_in_header=false sites_only=false never_trim_vcf_format_field=false bcf=false bam_compression=null simplifyBAM=false disable_bam_indexing=false generate_md5=false num_threads=1 num_cpu_threads_per_data_thread=1 num_io_threads=0 monitorThreadEfficiency=false num_bam_file_handles=null read_group_black_list=null pedigree=[] pedigreeString=[] pedigreeValidationType=STRICT allow_intervals_with_unindexed_bam=false generateShadowBCF=false variant_index_type=DYNAMIC_SEEK variant_index_parameter=-1 reference_window_stop=0 phone_home= gatk_key=null tag=NA logging_level=INFO log_to_file=null help=false version=false out=/scratch/analysis_staging/a_script/bovis_reanalysis_af2122_2017-12-14/2001-2008/01-1787/01-1787-hapall.vcf likelihoodCalculationEngine=PairHMM heterogeneousKmerSizeResolution=COMBO_MIN dbsnp=(RodBinding name= source=UNBOUND) dontTrimActiveRegions=false maxDiscARExtension=25 maxGGAARExtension=300 paddingAroundIndels=150 paddingAroundSNPs=20 comp=[] annotation=[] excludeAnnotation=[] group=[StandardAnnotation, StandardHCAnnotation] debug=false useFilteredReadsForAnnotations=false emitRefConfidence=NONE bamWriterType=CALLED_HAPLOTYPES emitDroppedReads=false disableOptimizations=false annotateNDA=false useNewAFCalculator=false heterozygosity=0.001 indel_heterozygosity=1.25E-4 heterozygosity_stdev=0.01 standard_min_confidence_threshold_for_calling=10.0 standard_min_confidence_threshold_for_emitting=30.0 max_alternate_alleles=6 max_genotype_count=1024 max_num_PL_values=100 input_prior=[] sample_ploidy=2 genotyping_mode=DISCOVERY alleles=(RodBinding name= source=UNBOUND) contamination_fraction_to_filter=0.0 contamination_fraction_per_sample_file=null p_nonref_model=null exactcallslog=null output_mode=EMIT_VARIANTS_ONLY allSitePLs=false gcpHMM=10 pair_hmm_implementation=FASTEST_AVAILABLE phredScaledGlobalReadMismappingRate=45 noFpga=false nativePairHmmThreads=1 useDoublePrecision=false sample_name=null kmerSize=[10, 25] dontIncreaseKmerSizesForCycles=false allowNonUniqueKmersInRef=true numPruningSamples=1 recoverDanglingHeads=false doNotRecoverDanglingBranches=false minDanglingBranchLength=4 consensus=false maxNumHaplotypesInPopulation=128 errorCorrectKmers=false minPruning=2 debugGraphTransformations=false allowCyclesInKmerGraphToGeneratePaths=false graphOutput=null kmerLengthForReadErrorCorrection=25 minObservationsForKmerToBeSolid=20 GVCFGQBands=[1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 70, 80, 90, 99] indelSizeToEliminateInRefModel=10 min_base_quality_score=10 includeUmappedReads=false useAllelesTrigger=false doNotRunPhysicalPhasing=true keepRG=null justDetermineActiveRegions=false dontGenotype=false dontUseSoftClippedBases=true captureAssemblyFailureBAM=false errorCorrectReads=false pcr_indel_model=CONSERVATIVE maxReadsInRegionPerSample=10000 minReadsPerAlignmentStart=10 mergeVariantsViaLD=false activityProfileOut=null activeRegionOut=null activeRegionIn=null activeRegionExtension=null forceActive=false activeRegionMaxSize=null bandPassSigma=null maxReadsInMemoryPerSample=30000 maxTotalReadsInMemory=10000000 maxProbPropagationDistance=50 activeProbabilityThreshold=0.002 min_mapping_quality_score=20 filter_reads_with_N_cigar=false filter_mismatching_base_and_quals=false filter_bases_not_stored=false"> +##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed"> +##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed"> +##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes"> +##INFO=<ID=BaseQRankSum,Number=1,Type=Float,Description="Z-score from Wilcoxon rank sum test of Alt Vs. Ref base qualities"> +##INFO=<ID=ClippingRankSum,Number=1,Type=Float,Description="Z-score From Wilcoxon rank sum test of Alt vs. Ref number of hard clipped bases"> +##INFO=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth; some reads may have been filtered"> +##INFO=<ID=DS,Number=0,Type=Flag,Description="Were any of the samples downsampled?"> +##INFO=<ID=ExcessHet,Number=1,Type=Float,Description="Phred-scaled p-value for exact test of excess heterozygosity"> +##INFO=<ID=FS,Number=1,Type=Float,Description="Phred-scaled p-value using Fisher's exact test to detect strand bias"> +##INFO=<ID=HaplotypeScore,Number=1,Type=Float,Description="Consistency of the site with at most two segregating haplotypes"> +##INFO=<ID=InbreedingCoeff,Number=1,Type=Float,Description="Inbreeding coefficient as estimated from the genotype likelihoods per-sample when compared against the Hardy-Weinberg expectation"> +##INFO=<ID=MLEAC,Number=A,Type=Integer,Description="Maximum likelihood expectation (MLE) for the allele counts (not necessarily the same as the AC), for each ALT allele, in the same order as listed"> +##INFO=<ID=MLEAF,Number=A,Type=Float,Description="Maximum likelihood expectation (MLE) for the allele frequency (not necessarily the same as the AF), for each ALT allele, in the same order as listed"> +##INFO=<ID=MQ,Number=1,Type=Float,Description="RMS Mapping Quality"> +##INFO=<ID=MQRankSum,Number=1,Type=Float,Description="Z-score From Wilcoxon rank sum test of Alt vs. Ref read mapping qualities"> +##INFO=<ID=QD,Number=1,Type=Float,Description="Variant Confidence/Quality by Depth"> +##INFO=<ID=ReadPosRankSum,Number=1,Type=Float,Description="Z-score from Wilcoxon rank sum test of Alt vs. Ref read position bias"> +##INFO=<ID=SOR,Number=1,Type=Float,Description="Symmetric Odds Ratio of 2x2 contingency table to detect strand bias"> +##contig=<ID=NC_002945.4,length=4349904> +##reference=file:///scratch/analysis_staging/a_script/bovis_reanalysis_af2122_2017-12-14/2001-2008/01-1787/NC_002945v4.fasta +#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT 01-1787 +NC_002945.4 1057 . A G 10912.77 . AC=2;AF=1.00;AN=2;DP=397;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.56;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,396:396:99:10941,1177,0 +NC_002945.4 8741 . T C 8362.77 . AC=2;AF=1.00;AN=2;DP=250;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.45;SOR=1.392 GT:AD:DP:GQ:PL 1/1:0,250:250:99:8391,748,0 +NC_002945.4 14487 . C G 6175.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.669;ClippingRankSum=0.000;DP=165;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.88;ReadPosRankSum=-0.324;SOR=4.804 GT:AD:DP:GQ:PL 1/1:1,159:160:99:6204,468,0 +NC_002945.4 33788 . A G 7640.77 . AC=2;AF=1.00;AN=2;DP=180;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.31;SOR=4.828 GT:AD:DP:GQ:PL 1/1:0,180:180:99:7669,542,0 +NC_002945.4 41437 . T C 10083.77 . AC=2;AF=1.00;AN=2;DP=342;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.48;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,342:342:99:10112,1020,0 +NC_002945.4 57197 . G C 3714.77 . AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.21;SOR=3.809 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3743,315,0 +NC_002945.4 67098 . G A 7793.77 . AC=2;AF=1.00;AN=2;DP=260;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.09;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,259:259:99:7822,775,0 +NC_002945.4 69913 . T C 10036.77 . AC=2;AF=1.00;AN=2;DP=321;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.27;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,321:321:99:10065,956,0 +NC_002945.4 103928 . G C 4649.77 . AC=2;AF=1.00;AN=2;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.64;QD=27.17;SOR=2.573 GT:AD:DP:GQ:PL 1/1:0,110:110:99:4678,331,0 +NC_002945.4 103931 . G C 4505.77 . AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.18;QD=26.01;SOR=2.509 GT:AD:DP:GQ:PL 1/1:0,107:107:99:4534,321,0 +NC_002945.4 104264 . A G 241.80 . AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=34.54;QD=34.54;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:270,21,0 +NC_002945.4 119328 . G T 12064.77 . AC=2;AF=1.00;AN=2;DP=423;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.52;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,423:423:99:12093,1260,0 +NC_002945.4 127447 . G C 6051.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.843;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.52;ReadPosRankSum=-0.504;SOR=0.572 GT:AD:DP:GQ:PL 1/1:1,191:192:99:6080,562,0 +NC_002945.4 130237 . T C 8833.77 . AC=2;AF=1.00;AN=2;DP=293;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.15;SOR=1.012 GT:AD:DP:GQ:PL 1/1:0,293:293:99:8862,869,0 +NC_002945.4 159370 . A G 6799.77 . AC=2;AF=1.00;AN=2;DP=217;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.34;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,217:217:99:6828,648,0 +NC_002945.4 160535 . T C 8515.77 . AC=2;AF=1.00;AN=2;DP=279;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.63;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,278:278:99:8544,826,0 +NC_002945.4 165799 . G A 8624.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.926;ClippingRankSum=0.000;DP=307;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.19;ReadPosRankSum=1.442;SOR=0.272 GT:AD:DP:GQ:PL 1/1:1,305:306:99:8653,897,0 +NC_002945.4 166696 . A G 6491.77 . AC=2;AF=1.00;AN=2;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.77;SOR=1.079 GT:AD:DP:GQ:PL 1/1:0,211:211:99:6520,627,0 +NC_002945.4 180444 . T C 8771.77 . AC=2;AF=1.00;AN=2;DP=315;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.94;SOR=1.168 GT:AD:DP:GQ:PL 1/1:0,314:314:99:8800,931,0 +NC_002945.4 182704 . G A 7366.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.976;ClippingRankSum=0.000;DP=272;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.49;ReadPosRankSum=1.545;SOR=0.382 GT:AD:DP:GQ:PL 1/1:3,265:268:99:7395,761,0 +NC_002945.4 185429 . T C 6597.77 . AC=2;AF=1.00;AN=2;DP=187;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.02;SOR=2.760 GT:AD:DP:GQ:PL 1/1:0,187:187:99:6626,561,0 +NC_002945.4 228660 . C T 6295.77 . AC=2;AF=1.00;AN=2;DP=232;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.49;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,229:229:99:6324,681,0 +NC_002945.4 232188 . G C 4879.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.654;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.94;ReadPosRankSum=1.419;SOR=0.712 GT:AD:DP:GQ:PL 1/1:1,162:163:99:4908,474,0 +NC_002945.4 246207 . C T 8706.77 . AC=2;AF=1.00;AN=2;DP=298;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.22;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,298:298:99:8735,889,0 +NC_002945.4 255465 . A G 9237.77 . AC=2;AF=1.00;AN=2;DP=284;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.53;SOR=0.875 GT:AD:DP:GQ:PL 1/1:0,284:284:99:9266,848,0 +NC_002945.4 295519 . T C 9658.77 . AC=2;AF=1.00;AN=2;DP=309;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.36;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,308:308:99:9687,920,0 +NC_002945.4 306689 . N . . . . GT ./. +NC_002945.4 306690 . N . . . . GT ./. +NC_002945.4 306691 . N . . . . GT ./. +NC_002945.4 306692 . N . . . . GT ./. +NC_002945.4 306693 . N . . . . GT ./. +NC_002945.4 306694 . N . . . . GT ./. +NC_002945.4 306695 . N . . . . GT ./. +NC_002945.4 306696 . N . . . . GT ./. +NC_002945.4 306697 . N . . . . GT ./. +NC_002945.4 306698 . N . . . . GT ./. +NC_002945.4 306699 . N . . . . GT ./. +NC_002945.4 306700 . N . . . . GT ./. +NC_002945.4 306701 . N . . . . GT ./. +NC_002945.4 306702 . N . . . . GT ./. +NC_002945.4 306703 . N . . . . GT ./. +NC_002945.4 306704 . N . . . . GT ./. +NC_002945.4 306705 . N . . . . GT ./. +NC_002945.4 306706 . N . . . . GT ./. +NC_002945.4 306707 . N . . . . GT ./. +NC_002945.4 306708 . N . . . . GT ./. +NC_002945.4 306709 . N . . . . GT ./. +NC_002945.4 324581 . G A 8321.77 . AC=2;AF=1.00;AN=2;DP=280;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,280:280:99:8350,837,0 +NC_002945.4 333332 . N . . . . GT ./. +NC_002945.4 333333 . N . . . . GT ./. +NC_002945.4 333334 . N . . . . GT ./. +NC_002945.4 333335 . N . . . . GT ./. +NC_002945.4 333336 . N . . . . GT ./. +NC_002945.4 333337 . N . . . . GT ./. +NC_002945.4 333338 . N . . . . GT ./. +NC_002945.4 333342 . N . . . . GT ./. +NC_002945.4 333343 . N . . . . GT ./. +NC_002945.4 333344 . N . . . . GT ./. +NC_002945.4 333345 . N . . . . GT ./. +NC_002945.4 333346 . N . . . . GT ./. +NC_002945.4 333347 . N . . . . GT ./. +NC_002945.4 333363 . N . . . . GT ./. +NC_002945.4 333364 . N . . . . GT ./. +NC_002945.4 333365 . N . . . . GT ./. +NC_002945.4 333366 . N . . . . GT ./. +NC_002945.4 333367 . N . . . . GT ./. +NC_002945.4 333368 . N . . . . GT ./. +NC_002945.4 333369 . N . . . . GT ./. +NC_002945.4 333370 . N . . . . GT ./. +NC_002945.4 333371 . N . . . . GT ./. +NC_002945.4 333372 . N . . . . GT ./. +NC_002945.4 333373 . N . . . . GT ./. +NC_002945.4 333374 . N . . . . GT ./. +NC_002945.4 333375 . N . . . . GT ./. +NC_002945.4 333376 . N . . . . GT ./. +NC_002945.4 333377 . N . . . . GT ./. +NC_002945.4 333378 . N . . . . GT ./. +NC_002945.4 333379 . N . . . . GT ./. +NC_002945.4 333380 . N . . . . GT ./. +NC_002945.4 333381 . N . . . . GT ./. +NC_002945.4 333382 . N . . . . GT ./. +NC_002945.4 333383 . N . . . . GT ./. +NC_002945.4 333384 . N . . . . GT ./. +NC_002945.4 333385 . N . . . . GT ./. +NC_002945.4 333386 . N . . . . GT ./. +NC_002945.4 333387 . N . . . . GT ./. +NC_002945.4 333388 . N . . . . GT ./. +NC_002945.4 333389 . N . . . . GT ./. +NC_002945.4 333390 . N . . . . GT ./. +NC_002945.4 333391 . N . . . . GT ./. +NC_002945.4 333392 . N . . . . GT ./. +NC_002945.4 333393 . N . . . . GT ./. +NC_002945.4 333394 . N . . . . GT ./. +NC_002945.4 333395 . N . . . . GT ./. +NC_002945.4 333396 . N . . . . GT ./. +NC_002945.4 333397 . N . . . . GT ./. +NC_002945.4 333398 . N . . . . GT ./. +NC_002945.4 333399 . N . . . . GT ./. +NC_002945.4 333400 . N . . . . GT ./. +NC_002945.4 333401 . N . . . . GT ./. +NC_002945.4 333402 . N . . . . GT ./. +NC_002945.4 333403 . N . . . . GT ./. +NC_002945.4 333404 . N . . . . GT ./. +NC_002945.4 333405 . N . . . . GT ./. +NC_002945.4 333406 . N . . . . GT ./. +NC_002945.4 333407 . N . . . . GT ./. +NC_002945.4 333408 . N . . . . GT ./. +NC_002945.4 333409 . N . . . . GT ./. +NC_002945.4 333410 . N . . . . GT ./. +NC_002945.4 333495 . N . . . . GT ./. +NC_002945.4 333496 . N . . . . GT ./. +NC_002945.4 333497 . N . . . . GT ./. +NC_002945.4 333498 . N . . . . GT ./. +NC_002945.4 333499 . N . . . . GT ./. +NC_002945.4 333500 . N . . . . GT ./. +NC_002945.4 333501 . N . . . . GT ./. +NC_002945.4 333502 . N . . . . GT ./. +NC_002945.4 333503 . N . . . . GT ./. +NC_002945.4 333504 . N . . . . GT ./. +NC_002945.4 333505 . N . . . . GT ./. +NC_002945.4 333506 . N . . . . GT ./. +NC_002945.4 333507 . N . . . . GT ./. +NC_002945.4 333508 . N . . . . GT ./. +NC_002945.4 333509 . N . . . . GT ./. +NC_002945.4 333510 . N . . . . GT ./. +NC_002945.4 333511 . N . . . . GT ./. +NC_002945.4 333512 . N . . . . GT ./. +NC_002945.4 333513 . N . . . . GT ./. +NC_002945.4 333514 . N . . . . GT ./. +NC_002945.4 333515 . N . . . . GT ./. +NC_002945.4 333516 . N . . . . GT ./. +NC_002945.4 333517 . N . . . . GT ./. +NC_002945.4 333518 . N . . . . GT ./. +NC_002945.4 333519 . N . . . . GT ./. +NC_002945.4 333520 . N . . . . GT ./. +NC_002945.4 333574 . N . . . . GT ./. +NC_002945.4 333575 . N . . . . GT ./. +NC_002945.4 333576 . N . . . . GT ./. +NC_002945.4 333577 . N . . . . GT ./. +NC_002945.4 333578 . N . . . . GT ./. +NC_002945.4 333579 . N . . . . GT ./. +NC_002945.4 333580 . N . . . . GT ./. +NC_002945.4 333581 . N . . . . GT ./. +NC_002945.4 333582 . N . . . . GT ./. +NC_002945.4 333583 . N . . . . GT ./. +NC_002945.4 333584 . N . . . . GT ./. +NC_002945.4 333585 . N . . . . GT ./. +NC_002945.4 333586 . N . . . . GT ./. +NC_002945.4 333587 . N . . . . GT ./. +NC_002945.4 333588 . N . . . . GT ./. +NC_002945.4 333589 . N . . . . GT ./. +NC_002945.4 333590 . N . . . . GT ./. +NC_002945.4 333591 . N . . . . GT ./. +NC_002945.4 333592 . N . . . . GT ./. +NC_002945.4 333593 . N . . . . GT ./. +NC_002945.4 333594 . N . . . . GT ./. +NC_002945.4 333595 . N . . . . GT ./. +NC_002945.4 333596 . N . . . . GT ./. +NC_002945.4 333597 . N . . . . GT ./. +NC_002945.4 333598 . N . . . . GT ./. +NC_002945.4 333599 . N . . . . GT ./. +NC_002945.4 333600 . N . . . . GT ./. +NC_002945.4 333601 . N . . . . GT ./. +NC_002945.4 333602 . N . . . . GT ./. +NC_002945.4 333603 . N . . . . GT ./. +NC_002945.4 333604 . N . . . . GT ./. +NC_002945.4 333605 . N . . . . GT ./. +NC_002945.4 333606 . N . . . . GT ./. +NC_002945.4 333607 . N . . . . GT ./. +NC_002945.4 333608 . N . . . . GT ./. +NC_002945.4 333609 . N . . . . GT ./. +NC_002945.4 333610 . N . . . . GT ./. +NC_002945.4 333611 . N . . . . GT ./. +NC_002945.4 333612 . N . . . . GT ./. +NC_002945.4 333613 . N . . . . GT ./. +NC_002945.4 333614 . N . . . . GT ./. +NC_002945.4 333615 . N . . . . GT ./. +NC_002945.4 333616 . N . . . . GT ./. +NC_002945.4 333617 . N . . . . GT ./. +NC_002945.4 333618 . N . . . . GT ./. +NC_002945.4 333619 . N . . . . GT ./. +NC_002945.4 333620 . N . . . . GT ./. +NC_002945.4 333621 . N . . . . GT ./. +NC_002945.4 333622 . N . . . . GT ./. +NC_002945.4 333623 . N . . . . GT ./. +NC_002945.4 333624 . N . . . . GT ./. +NC_002945.4 333625 . N . . . . GT ./. +NC_002945.4 333626 . N . . . . GT ./. +NC_002945.4 333627 . N . . . . GT ./. +NC_002945.4 333628 . N . . . . GT ./. +NC_002945.4 333629 . N . . . . GT ./. +NC_002945.4 333630 . N . . . . GT ./. +NC_002945.4 333631 . N . . . . GT ./. +NC_002945.4 333632 . N . . . . GT ./. +NC_002945.4 333633 . N . . . . GT ./. +NC_002945.4 333634 . N . . . . GT ./. +NC_002945.4 333635 . N . . . . GT ./. +NC_002945.4 333636 . N . . . . GT ./. +NC_002945.4 333637 . N . . . . GT ./. +NC_002945.4 333638 . N . . . . GT ./. +NC_002945.4 333639 . N . . . . GT ./. +NC_002945.4 333640 . N . . . . GT ./. +NC_002945.4 333641 . N . . . . GT ./. +NC_002945.4 333642 . N . . . . GT ./. +NC_002945.4 333643 . N . . . . GT ./. +NC_002945.4 333644 . N . . . . GT ./. +NC_002945.4 333645 . N . . . . GT ./. +NC_002945.4 333646 . N . . . . GT ./. +NC_002945.4 333647 . N . . . . GT ./. +NC_002945.4 333648 . N . . . . GT ./. +NC_002945.4 333649 . N . . . . GT ./. +NC_002945.4 333650 . N . . . . GT ./. +NC_002945.4 334320 . T C 6159.77 . AC=2;AF=1.00;AN=2;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.82;QD=34.79;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,140:140:99:6188,430,0 +NC_002945.4 334323 . T C 6159.77 . AC=2;AF=1.00;AN=2;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.88;QD=30.48;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,140:140:99:6188,430,0 +NC_002945.4 334911 . T C 1126.77 . AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.75;QD=34.14;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1155,99,0 +NC_002945.4 339207 . C T 1731.77 . AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.53;QD=27.70;SOR=5.464 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1760,141,0 +NC_002945.4 340088 . G T 7466.77 . AC=2;AF=1.00;AN=2;DP=163;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.52;QD=31.90;SOR=0.951 GT:AD:DP:GQ:PL 1/1:0,163:163:99:7495,503,0 +NC_002945.4 340097 . C G 7625.77 . AC=2;AF=1.00;AN=2;DP=172;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.55;QD=26.48;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,172:172:99:7654,518,0 +NC_002945.4 341466 . C T 580.77 . AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.66;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,21:21:61:609,61,0 +NC_002945.4 362818 . T C 475.77 . AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.98;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:41:504,41,0 +NC_002945.4 364560 . A G 8761.77 . AC=2;AF=1.00;AN=2;DP=277;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,277:277:99:8790,827,0 +NC_002945.4 364804 . T C 8881.77 . AC=2;AF=1.00;AN=2;DP=291;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.52;SOR=0.928 GT:AD:DP:GQ:PL 1/1:0,291:291:99:8910,868,0 +NC_002945.4 364938 . A G 8855.77 . AC=2;AF=1.00;AN=2;DP=281;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.52;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,281:281:99:8884,838,0 +NC_002945.4 366022 . T C 7240.77 . AC=2;AF=1.00;AN=2;DP=241;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.17;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,240:240:99:7269,717,0 +NC_002945.4 397805 . N . . . . GT ./. +NC_002945.4 425171 . A G 9315.77 . AC=2;AF=1.00;AN=2;DP=296;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.58;SOR=1.337 GT:AD:DP:GQ:PL 1/1:0,295:295:99:9344,882,0 +NC_002945.4 425180 . C G 12925.77 . AC=2;AF=1.00;AN=2;DP=285;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.45;SOR=1.249 GT:AD:DP:GQ:PL 1/1:0,284:284:99:12954,888,0 +NC_002945.4 430077 . C T 8390.77 . AC=2;AF=1.00;AN=2;DP=300;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.35;SOR=0.982 GT:AD:DP:GQ:PL 1/1:0,296:296:99:8419,880,0 +NC_002945.4 441762 . C T 5249.77 . AC=2;AF=1.00;AN=2;DP=185;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.53;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,184:184:99:5278,544,0 +NC_002945.4 467343 . C T 7100.77 . AC=2;AF=1.00;AN=2;DP=252;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.29;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,251:251:99:7129,743,0 +NC_002945.4 490878 . G A 10603.77 . AC=2;AF=1.00;AN=2;DP=363;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.37;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,361:361:99:10632,1077,0 +NC_002945.4 507929 . T C 8684.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.936;ClippingRankSum=0.000;DP=305;ExcessHet=3.0103;FS=6.064;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.47;ReadPosRankSum=1.196;SOR=0.141 GT:AD:DP:GQ:PL 1/1:2,303:305:99:8713,890,0 +NC_002945.4 519412 . T C 5638.77 . AC=2;AF=1.00;AN=2;DP=178;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.68;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,178:178:99:5667,529,0 +NC_002945.4 544180 . C T 8067.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.894;ClippingRankSum=0.000;DP=289;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.31;ReadPosRankSum=-0.364;SOR=0.410 GT:AD:DP:GQ:PL 1/1:1,284:285:99:8096,836,0 +NC_002945.4 598704 . C G 9550.77 . AC=2;AF=1.00;AN=2;DP=310;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.91;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,309:309:99:9579,925,0 +NC_002945.4 602816 . A C 6370.77 . AC=2;AF=1.00;AN=2;DP=204;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.23;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,204:204:99:6399,609,0 +NC_002945.4 611077 . A G 8592.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.869;ClippingRankSum=0.000;DP=289;ExcessHet=3.0103;FS=4.300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.84;ReadPosRankSum=3.109;SOR=1.145 GT:AD:DP:GQ:PL 1/1:1,287:288:99:8621,846,0 +NC_002945.4 616758 . C T 5823.77 . AC=2;AF=1.00;AN=2;DP=203;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.83;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,202:202:99:5852,601,0 +NC_002945.4 622386 . C G 7860.77 . AC=2;AF=1.00;AN=2;DP=244;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.22;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,244:244:99:7889,731,0 +NC_002945.4 624481 . N . . . . GT ./. +NC_002945.4 624482 . N . . . . GT ./. +NC_002945.4 624483 . N . . . . GT ./. +NC_002945.4 624484 . N . . . . GT ./. +NC_002945.4 624485 . N . . . . GT ./. +NC_002945.4 624486 . N . . . . GT ./. +NC_002945.4 624487 . N . . . . GT ./. +NC_002945.4 624488 . N . . . . GT ./. +NC_002945.4 624489 . N . . . . GT ./. +NC_002945.4 624490 . N . . . . GT ./. +NC_002945.4 624491 . N . . . . GT ./. +NC_002945.4 624492 . N . . . . GT ./. +NC_002945.4 624493 . N . . . . GT ./. +NC_002945.4 624494 . N . . . . GT ./. +NC_002945.4 624495 . N . . . . GT ./. +NC_002945.4 624496 . N . . . . GT ./. +NC_002945.4 624497 . N . . . . GT ./. +NC_002945.4 624498 . N . . . . GT ./. +NC_002945.4 624499 . N . . . . GT ./. +NC_002945.4 624500 . N . . . . GT ./. +NC_002945.4 624501 . N . . . . GT ./. +NC_002945.4 624502 . N . . . . GT ./. +NC_002945.4 624503 . N . . . . GT ./. +NC_002945.4 624504 . N . . . . GT ./. +NC_002945.4 624505 . N . . . . GT ./. +NC_002945.4 624506 . N . . . . GT ./. +NC_002945.4 624507 . N . . . . GT ./. +NC_002945.4 624508 . N . . . . GT ./. +NC_002945.4 624509 . N . . . . GT ./. +NC_002945.4 624510 . N . . . . GT ./. +NC_002945.4 624511 . N . . . . GT ./. +NC_002945.4 624512 . N . . . . GT ./. +NC_002945.4 624513 . N . . . . GT ./. +NC_002945.4 624514 . N . . . . GT ./. +NC_002945.4 624515 . N . . . . GT ./. +NC_002945.4 624516 . N . . . . GT ./. +NC_002945.4 624517 . N . . . . GT ./. +NC_002945.4 624518 . N . . . . GT ./. +NC_002945.4 624519 . N . . . . GT ./. +NC_002945.4 624520 . N . . . . GT ./. +NC_002945.4 624521 . N . . . . GT ./. +NC_002945.4 624522 . N . . . . GT ./. +NC_002945.4 624523 . N . . . . GT ./. +NC_002945.4 624524 . N . . . . GT ./. +NC_002945.4 624525 . N . . . . GT ./. +NC_002945.4 624526 . N . . . . GT ./. +NC_002945.4 624527 . N . . . . GT ./. +NC_002945.4 624528 . N . . . . GT ./. +NC_002945.4 624529 . N . . . . GT ./. +NC_002945.4 624530 . N . . . . GT ./. +NC_002945.4 624531 . N . . . . GT ./. +NC_002945.4 624532 . N . . . . GT ./. +NC_002945.4 624533 . N . . . . GT ./. +NC_002945.4 624534 . N . . . . GT ./. +NC_002945.4 624535 . N . . . . GT ./. +NC_002945.4 624536 . N . . . . GT ./. +NC_002945.4 624537 . N . . . . GT ./. +NC_002945.4 624538 . N . . . . GT ./. +NC_002945.4 624539 . N . . . . GT ./. +NC_002945.4 624540 . N . . . . GT ./. +NC_002945.4 624541 . N . . . . GT ./. +NC_002945.4 624542 . N . . . . GT ./. +NC_002945.4 624543 . N . . . . GT ./. +NC_002945.4 624544 . N . . . . GT ./. +NC_002945.4 624545 . N . . . . GT ./. +NC_002945.4 624546 . N . . . . GT ./. +NC_002945.4 624547 . N . . . . GT ./. +NC_002945.4 624548 . N . . . . GT ./. +NC_002945.4 624549 . N . . . . GT ./. +NC_002945.4 624550 . N . . . . GT ./. +NC_002945.4 624551 . N . . . . GT ./. +NC_002945.4 624552 . N . . . . GT ./. +NC_002945.4 624553 . N . . . . GT ./. +NC_002945.4 624554 . N . . . . GT ./. +NC_002945.4 624555 . N . . . . GT ./. +NC_002945.4 624556 . N . . . . GT ./. +NC_002945.4 624557 . N . . . . GT ./. +NC_002945.4 624558 . N . . . . GT ./. +NC_002945.4 624559 . N . . . . GT ./. +NC_002945.4 624560 . N . . . . GT ./. +NC_002945.4 624561 . N . . . . GT ./. +NC_002945.4 624562 . N . . . . GT ./. +NC_002945.4 624563 . N . . . . GT ./. +NC_002945.4 624564 . N . . . . GT ./. +NC_002945.4 624565 . N . . . . GT ./. +NC_002945.4 624566 . N . . . . GT ./. +NC_002945.4 624567 . N . . . . GT ./. +NC_002945.4 624568 . N . . . . GT ./. +NC_002945.4 624569 . N . . . . GT ./. +NC_002945.4 624570 . N . . . . GT ./. +NC_002945.4 624571 . N . . . . GT ./. +NC_002945.4 624572 . N . . . . GT ./. +NC_002945.4 624573 . N . . . . GT ./. +NC_002945.4 624574 . N . . . . GT ./. +NC_002945.4 624575 . N . . . . GT ./. +NC_002945.4 624576 . N . . . . GT ./. +NC_002945.4 624577 . N . . . . GT ./. +NC_002945.4 624578 . N . . . . GT ./. +NC_002945.4 624579 . N . . . . GT ./. +NC_002945.4 624580 . N . . . . GT ./. +NC_002945.4 624581 . N . . . . GT ./. +NC_002945.4 624582 . N . . . . GT ./. +NC_002945.4 624583 . N . . . . GT ./. +NC_002945.4 624584 . N . . . . GT ./. +NC_002945.4 624585 . N . . . . GT ./. +NC_002945.4 624586 . N . . . . GT ./. +NC_002945.4 624587 . N . . . . GT ./. +NC_002945.4 624588 . N . . . . GT ./. +NC_002945.4 624589 . N . . . . GT ./. +NC_002945.4 624590 . N . . . . GT ./. +NC_002945.4 624591 . N . . . . GT ./. +NC_002945.4 624592 . N . . . . GT ./. +NC_002945.4 624593 . N . . . . GT ./. +NC_002945.4 624594 . N . . . . GT ./. +NC_002945.4 624595 . N . . . . GT ./. +NC_002945.4 624596 . N . . . . GT ./. +NC_002945.4 624597 . N . . . . GT ./. +NC_002945.4 624598 . N . . . . GT ./. +NC_002945.4 624599 . N . . . . GT ./. +NC_002945.4 624600 . N . . . . GT ./. +NC_002945.4 624601 . N . . . . GT ./. +NC_002945.4 624602 . N . . . . GT ./. +NC_002945.4 624603 . N . . . . GT ./. +NC_002945.4 624604 . N . . . . GT ./. +NC_002945.4 624605 . N . . . . GT ./. +NC_002945.4 624606 . N . . . . GT ./. +NC_002945.4 624607 . N . . . . GT ./. +NC_002945.4 624608 . N . . . . GT ./. +NC_002945.4 624609 . N . . . . GT ./. +NC_002945.4 624610 . N . . . . GT ./. +NC_002945.4 624611 . N . . . . GT ./. +NC_002945.4 624612 . N . . . . GT ./. +NC_002945.4 624613 . N . . . . GT ./. +NC_002945.4 624614 . N . . . . GT ./. +NC_002945.4 624615 . N . . . . GT ./. +NC_002945.4 624616 . N . . . . GT ./. +NC_002945.4 624617 . N . . . . GT ./. +NC_002945.4 624618 . N . . . . GT ./. +NC_002945.4 624619 . N . . . . GT ./. +NC_002945.4 624620 . N . . . . GT ./. +NC_002945.4 624621 . N . . . . GT ./. +NC_002945.4 624622 . N . . . . GT ./. +NC_002945.4 624623 . N . . . . GT ./. +NC_002945.4 624624 . N . . . . GT ./. +NC_002945.4 624625 . N . . . . GT ./. +NC_002945.4 624626 . N . . . . GT ./. +NC_002945.4 624627 . N . . . . GT ./. +NC_002945.4 624628 . N . . . . GT ./. +NC_002945.4 624629 . N . . . . GT ./. +NC_002945.4 624630 . N . . . . GT ./. +NC_002945.4 624631 . N . . . . GT ./. +NC_002945.4 624632 . N . . . . GT ./. +NC_002945.4 624633 . N . . . . GT ./. +NC_002945.4 624634 . N . . . . GT ./. +NC_002945.4 624635 . N . . . . GT ./. +NC_002945.4 624636 . N . . . . GT ./. +NC_002945.4 624637 . N . . . . GT ./. +NC_002945.4 624638 . N . . . . GT ./. +NC_002945.4 624639 . N . . . . GT ./. +NC_002945.4 624640 . N . . . . GT ./. +NC_002945.4 624641 . N . . . . GT ./. +NC_002945.4 624642 . N . . . . GT ./. +NC_002945.4 624643 . N . . . . GT ./. +NC_002945.4 624644 . N . . . . GT ./. +NC_002945.4 624645 . N . . . . GT ./. +NC_002945.4 624646 . N . . . . GT ./. +NC_002945.4 624647 . N . . . . GT ./. +NC_002945.4 624648 . N . . . . GT ./. +NC_002945.4 624649 . N . . . . GT ./. +NC_002945.4 624650 . N . . . . GT ./. +NC_002945.4 624651 . N . . . . GT ./. +NC_002945.4 624652 . N . . . . GT ./. +NC_002945.4 624653 . N . . . . GT ./. +NC_002945.4 624654 . N . . . . GT ./. +NC_002945.4 624655 . N . . . . GT ./. +NC_002945.4 624656 . N . . . . GT ./. +NC_002945.4 624657 . N . . . . GT ./. +NC_002945.4 624658 . N . . . . GT ./. +NC_002945.4 624659 . N . . . . GT ./. +NC_002945.4 624660 . N . . . . GT ./. +NC_002945.4 624661 . N . . . . GT ./. +NC_002945.4 624662 . N . . . . GT ./. +NC_002945.4 624663 . N . . . . GT ./. +NC_002945.4 624664 . N . . . . GT ./. +NC_002945.4 624665 . N . . . . GT ./. +NC_002945.4 624666 . N . . . . GT ./. +NC_002945.4 624667 . N . . . . GT ./. +NC_002945.4 624668 . N . . . . GT ./. +NC_002945.4 624890 . N . . . . GT ./. +NC_002945.4 624891 . N . . . . GT ./. +NC_002945.4 624892 . N . . . . GT ./. +NC_002945.4 624893 . N . . . . GT ./. +NC_002945.4 624894 . N . . . . GT ./. +NC_002945.4 624895 . N . . . . GT ./. +NC_002945.4 624896 . N . . . . GT ./. +NC_002945.4 624897 . N . . . . GT ./. +NC_002945.4 624898 . N . . . . GT ./. +NC_002945.4 624899 . N . . . . GT ./. +NC_002945.4 624900 . N . . . . GT ./. +NC_002945.4 624901 . N . . . . GT ./. +NC_002945.4 624902 . N . . . . GT ./. +NC_002945.4 624903 . N . . . . GT ./. +NC_002945.4 624904 . N . . . . GT ./. +NC_002945.4 624905 . N . . . . GT ./. +NC_002945.4 624906 . N . . . . GT ./. +NC_002945.4 624907 . N . . . . GT ./. +NC_002945.4 624908 . N . . . . GT ./. +NC_002945.4 624909 . N . . . . GT ./. +NC_002945.4 624910 . N . . . . GT ./. +NC_002945.4 624911 . N . . . . GT ./. +NC_002945.4 624912 . N . . . . GT ./. +NC_002945.4 624913 . N . . . . GT ./. +NC_002945.4 624914 . N . . . . GT ./. +NC_002945.4 624915 . N . . . . GT ./. +NC_002945.4 624916 . N . . . . GT ./. +NC_002945.4 624917 . N . . . . GT ./. +NC_002945.4 639982 . A C 7683.77 . AC=2;AF=1.00;AN=2;DP=239;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.15;SOR=0.964 GT:AD:DP:GQ:PL 1/1:0,239:239:99:7712,711,0 +NC_002945.4 644245 . C G 7458.77 . AC=2;AF=1.00;AN=2;DP=258;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.91;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,258:258:99:7487,767,0 +NC_002945.4 649910 . T C 9252.77 . AC=2;AF=1.00;AN=2;DP=304;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.44;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,304:304:99:9281,906,0 +NC_002945.4 669797 . C T 7566.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.881;ClippingRankSum=0.000;DP=272;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.03;ReadPosRankSum=1.178;SOR=0.245 GT:AD:DP:GQ:PL 1/1:1,269:270:99:7595,789,0 +NC_002945.4 673880 . T C 1212.77 . AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.69;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1241,107,0 +NC_002945.4 676376 . N . . . . GT ./. +NC_002945.4 676377 . N . . . . GT ./. +NC_002945.4 676378 . N . . . . GT ./. +NC_002945.4 676379 . N . . . . GT ./. +NC_002945.4 676380 . N . . . . GT ./. +NC_002945.4 676381 . N . . . . GT ./. +NC_002945.4 676382 . N . . . . GT ./. +NC_002945.4 676383 . N . . . . GT ./. +NC_002945.4 676384 . N . . . . GT ./. +NC_002945.4 676385 . N . . . . GT ./. +NC_002945.4 676386 . N . . . . GT ./. +NC_002945.4 676387 . N . . . . GT ./. +NC_002945.4 676388 . N . . . . GT ./. +NC_002945.4 676389 . N . . . . GT ./. +NC_002945.4 676390 . N . . . . GT ./. +NC_002945.4 676391 . N . . . . GT ./. +NC_002945.4 676392 . N . . . . GT ./. +NC_002945.4 676393 . N . . . . GT ./. +NC_002945.4 676394 . N . . . . GT ./. +NC_002945.4 676395 . N . . . . GT ./. +NC_002945.4 676396 . N . . . . GT ./. +NC_002945.4 676397 . N . . . . GT ./. +NC_002945.4 676398 . N . . . . GT ./. +NC_002945.4 676399 . N . . . . GT ./. +NC_002945.4 676400 . N . . . . GT ./. +NC_002945.4 676401 . N . . . . GT ./. +NC_002945.4 676402 . N . . . . GT ./. +NC_002945.4 676403 . N . . . . GT ./. +NC_002945.4 676404 . N . . . . GT ./. +NC_002945.4 676405 . N . . . . GT ./. +NC_002945.4 676406 . N . . . . GT ./. +NC_002945.4 676407 . N . . . . GT ./. +NC_002945.4 676408 . N . . . . GT ./. +NC_002945.4 676409 . N . . . . GT ./. +NC_002945.4 676410 . N . . . . GT ./. +NC_002945.4 676411 . N . . . . GT ./. +NC_002945.4 676412 . N . . . . GT ./. +NC_002945.4 676413 . N . . . . GT ./. +NC_002945.4 676414 . N . . . . GT ./. +NC_002945.4 676415 . N . . . . GT ./. +NC_002945.4 676416 . N . . . . GT ./. +NC_002945.4 676417 . N . . . . GT ./. +NC_002945.4 676418 . N . . . . GT ./. +NC_002945.4 676419 . N . . . . GT ./. +NC_002945.4 676420 . N . . . . GT ./. +NC_002945.4 676421 . N . . . . GT ./. +NC_002945.4 676422 . N . . . . GT ./. +NC_002945.4 676423 . N . . . . GT ./. +NC_002945.4 676424 . N . . . . GT ./. +NC_002945.4 676425 . N . . . . GT ./. +NC_002945.4 676426 . N . . . . GT ./. +NC_002945.4 676427 . N . . . . GT ./. +NC_002945.4 676428 . N . . . . GT ./. +NC_002945.4 676429 . N . . . . GT ./. +NC_002945.4 676430 . N . . . . GT ./. +NC_002945.4 676431 . N . . . . GT ./. +NC_002945.4 676432 . N . . . . GT ./. +NC_002945.4 676433 . N . . . . GT ./. +NC_002945.4 676434 . N . . . . GT ./. +NC_002945.4 676435 . N . . . . GT ./. +NC_002945.4 676436 . N . . . . GT ./. +NC_002945.4 676437 . N . . . . GT ./. +NC_002945.4 676438 . N . . . . GT ./. +NC_002945.4 676439 . N . . . . GT ./. +NC_002945.4 676440 . N . . . . GT ./. +NC_002945.4 676441 . N . . . . GT ./. +NC_002945.4 676442 . N . . . . GT ./. +NC_002945.4 676443 . N . . . . GT ./. +NC_002945.4 676444 . N . . . . GT ./. +NC_002945.4 676445 . N . . . . GT ./. +NC_002945.4 676446 . N . . . . GT ./. +NC_002945.4 676447 . N . . . . GT ./. +NC_002945.4 676448 . N . . . . GT ./. +NC_002945.4 676449 . N . . . . GT ./. +NC_002945.4 676450 . N . . . . GT ./. +NC_002945.4 676451 . N . . . . GT ./. +NC_002945.4 676452 . N . . . . GT ./. +NC_002945.4 676453 . N . . . . GT ./. +NC_002945.4 676454 . N . . . . GT ./. +NC_002945.4 676455 . N . . . . GT ./. +NC_002945.4 676456 . N . . . . GT ./. +NC_002945.4 676457 . N . . . . GT ./. +NC_002945.4 676458 . N . . . . GT ./. +NC_002945.4 676459 . N . . . . GT ./. +NC_002945.4 676460 . N . . . . GT ./. +NC_002945.4 676461 . N . . . . GT ./. +NC_002945.4 676462 . N . . . . GT ./. +NC_002945.4 676463 . N . . . . GT ./. +NC_002945.4 676464 . N . . . . GT ./. +NC_002945.4 676465 . N . . . . GT ./. +NC_002945.4 676466 . N . . . . GT ./. +NC_002945.4 676467 . N . . . . GT ./. +NC_002945.4 676468 . N . . . . GT ./. +NC_002945.4 676469 . N . . . . GT ./. +NC_002945.4 676470 . N . . . . GT ./. +NC_002945.4 676471 . N . . . . GT ./. +NC_002945.4 676472 . N . . . . GT ./. +NC_002945.4 676473 . N . . . . GT ./. +NC_002945.4 676474 . N . . . . GT ./. +NC_002945.4 676475 . N . . . . GT ./. +NC_002945.4 676476 . N . . . . GT ./. +NC_002945.4 676477 . N . . . . GT ./. +NC_002945.4 676478 . N . . . . GT ./. +NC_002945.4 676479 . N . . . . GT ./. +NC_002945.4 676480 . N . . . . GT ./. +NC_002945.4 676481 . N . . . . GT ./. +NC_002945.4 676482 . N . . . . GT ./. +NC_002945.4 676483 . N . . . . GT ./. +NC_002945.4 676484 . N . . . . GT ./. +NC_002945.4 676485 . N . . . . GT ./. +NC_002945.4 676486 . N . . . . GT ./. +NC_002945.4 676487 . N . . . . GT ./. +NC_002945.4 676488 . N . . . . GT ./. +NC_002945.4 676489 . N . . . . GT ./. +NC_002945.4 676490 . N . . . . GT ./. +NC_002945.4 676491 . N . . . . GT ./. +NC_002945.4 676492 . N . . . . GT ./. +NC_002945.4 676493 . N . . . . GT ./. +NC_002945.4 676494 . N . . . . GT ./. +NC_002945.4 676495 . N . . . . GT ./. +NC_002945.4 676496 . N . . . . GT ./. +NC_002945.4 676497 . N . . . . GT ./. +NC_002945.4 676498 . N . . . . GT ./. +NC_002945.4 676499 . N . . . . GT ./. +NC_002945.4 676500 . N . . . . GT ./. +NC_002945.4 676501 . N . . . . GT ./. +NC_002945.4 676502 . N . . . . GT ./. +NC_002945.4 676503 . N . . . . GT ./. +NC_002945.4 676504 . N . . . . GT ./. +NC_002945.4 676505 . N . . . . GT ./. +NC_002945.4 676506 . N . . . . GT ./. +NC_002945.4 676507 . N . . . . GT ./. +NC_002945.4 676508 . N . . . . GT ./. +NC_002945.4 676509 . N . . . . GT ./. +NC_002945.4 676510 . N . . . . GT ./. +NC_002945.4 676511 . N . . . . GT ./. +NC_002945.4 676512 . N . . . . GT ./. +NC_002945.4 676513 . N . . . . GT ./. +NC_002945.4 676514 . N . . . . GT ./. +NC_002945.4 676515 . N . . . . GT ./. +NC_002945.4 676516 . N . . . . GT ./. +NC_002945.4 676517 . N . . . . GT ./. +NC_002945.4 676518 . N . . . . GT ./. +NC_002945.4 676519 . N . . . . GT ./. +NC_002945.4 676520 . N . . . . GT ./. +NC_002945.4 676521 . N . . . . GT ./. +NC_002945.4 676522 . N . . . . GT ./. +NC_002945.4 676523 . N . . . . GT ./. +NC_002945.4 676524 . N . . . . GT ./. +NC_002945.4 676525 . N . . . . GT ./. +NC_002945.4 676526 . N . . . . GT ./. +NC_002945.4 676527 . N . . . . GT ./. +NC_002945.4 676528 . N . . . . GT ./. +NC_002945.4 676529 . N . . . . GT ./. +NC_002945.4 676530 . N . . . . GT ./. +NC_002945.4 676531 . N . . . . GT ./. +NC_002945.4 676532 . N . . . . GT ./. +NC_002945.4 676533 . N . . . . GT ./. +NC_002945.4 676534 . N . . . . GT ./. +NC_002945.4 676535 . N . . . . GT ./. +NC_002945.4 676536 . N . . . . GT ./. +NC_002945.4 676537 . N . . . . GT ./. +NC_002945.4 676538 . N . . . . GT ./. +NC_002945.4 676539 . N . . . . GT ./. +NC_002945.4 676540 . N . . . . GT ./. +NC_002945.4 676541 . N . . . . GT ./. +NC_002945.4 676542 . N . . . . GT ./. +NC_002945.4 676543 . N . . . . GT ./. +NC_002945.4 676544 . N . . . . GT ./. +NC_002945.4 676545 . N . . . . GT ./. +NC_002945.4 676546 . N . . . . GT ./. +NC_002945.4 676547 . N . . . . GT ./. +NC_002945.4 676548 . N . . . . GT ./. +NC_002945.4 676549 . N . . . . GT ./. +NC_002945.4 676550 . N . . . . GT ./. +NC_002945.4 676551 . N . . . . GT ./. +NC_002945.4 676552 . N . . . . GT ./. +NC_002945.4 676553 . N . . . . GT ./. +NC_002945.4 676554 . N . . . . GT ./. +NC_002945.4 676555 . N . . . . GT ./. +NC_002945.4 676556 . N . . . . GT ./. +NC_002945.4 676557 . N . . . . GT ./. +NC_002945.4 676558 . N . . . . GT ./. +NC_002945.4 676559 . N . . . . GT ./. +NC_002945.4 676560 . N . . . . GT ./. +NC_002945.4 676561 . N . . . . GT ./. +NC_002945.4 676562 . N . . . . GT ./. +NC_002945.4 676563 . N . . . . GT ./. +NC_002945.4 676564 . N . . . . GT ./. +NC_002945.4 676565 . N . . . . GT ./. +NC_002945.4 676566 . N . . . . GT ./. +NC_002945.4 676567 . N . . . . GT ./. +NC_002945.4 676568 . N . . . . GT ./. +NC_002945.4 676569 . N . . . . GT ./. +NC_002945.4 676570 . N . . . . GT ./. +NC_002945.4 676571 . N . . . . GT ./. +NC_002945.4 676572 . N . . . . GT ./. +NC_002945.4 676573 . N . . . . GT ./. +NC_002945.4 676574 . N . . . . GT ./. +NC_002945.4 676575 . N . . . . GT ./. +NC_002945.4 676576 . N . . . . GT ./. +NC_002945.4 676577 . N . . . . GT ./. +NC_002945.4 676578 . N . . . . GT ./. +NC_002945.4 676579 . N . . . . GT ./. +NC_002945.4 676580 . N . . . . GT ./. +NC_002945.4 676581 . N . . . . GT ./. +NC_002945.4 676582 . N . . . . GT ./. +NC_002945.4 676583 . N . . . . GT ./. +NC_002945.4 676584 . N . . . . GT ./. +NC_002945.4 676585 . N . . . . GT ./. +NC_002945.4 676586 . N . . . . GT ./. +NC_002945.4 676587 . N . . . . GT ./. +NC_002945.4 676588 . N . . . . GT ./. +NC_002945.4 676589 . N . . . . GT ./. +NC_002945.4 676590 . N . . . . GT ./. +NC_002945.4 676591 . N . . . . GT ./. +NC_002945.4 676592 . N . . . . GT ./. +NC_002945.4 680416 . C T 9113.77 . AC=2;AF=1.00;AN=2;DP=313;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.40;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,310:310:99:9142,919,0 +NC_002945.4 685069 . T C 4998.77 . AC=2;AF=1.00;AN=2;DP=164;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.67;SOR=1.482 GT:AD:DP:GQ:PL 1/1:0,163:163:99:5027,487,0 +NC_002945.4 698889 . T C 253.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.769;ClippingRankSum=0.000;DP=270;ExcessHet=3.0103;FS=2.667;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=0.95;ReadPosRankSum=0.959;SOR=0.459 GT:AD:DP:GQ:PL 0/1:235,31:266:99:282,0,7083 +NC_002945.4 701329 . G C 4240.77 . AC=2;AF=1.00;AN=2;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.62;SOR=2.961 GT:AD:DP:GQ:PL 1/1:0,130:130:99:4269,387,0 +NC_002945.4 701386 . A G 5073.77 . AC=2;AF=1.00;AN=2;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.99;SOR=1.710 GT:AD:DP:GQ:PL 1/1:0,145:145:99:5102,435,0 +NC_002945.4 704374 . A G 7568.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.841;ClippingRankSum=0.000;DP=262;ExcessHet=3.0103;FS=28.810;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.89;ReadPosRankSum=3.213;SOR=2.109 GT:AD:DP:GQ:PL 1/1:5,257:262:99:7597,720,0 +NC_002945.4 712319 . T C 6346.77 . AC=2;AF=1.00;AN=2;DP=218;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=0.938 GT:AD:DP:GQ:PL 1/1:0,216:216:99:6375,641,0 +NC_002945.4 726979 . A G 4985.77 . AC=2;AF=1.00;AN=2;DP=165;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.59;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,163:163:99:5014,486,0 +NC_002945.4 736081 . T C 6125.77 . AC=2;AF=1.00;AN=2;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.58;SOR=1.345 GT:AD:DP:GQ:PL 1/1:0,194:194:99:6154,576,0 +NC_002945.4 754315 . G T 6871.77 . AC=2;AF=1.00;AN=2;DP=160;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.56;SOR=0.948 GT:AD:DP:GQ:PL 1/1:0,156:156:99:6900,472,0 +NC_002945.4 754317 . C T 6871.77 . AC=2;AF=1.00;AN=2;DP=160;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.60;SOR=0.980 GT:AD:DP:GQ:PL 1/1:0,156:156:99:6900,472,0 +NC_002945.4 759943 . C T 7848.77 . AC=2;AF=1.00;AN=2;DP=275;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.54;SOR=0.873 GT:AD:DP:GQ:PL 1/1:0,275:275:99:7877,812,0 +NC_002945.4 776314 . A C 5932.77 . AC=2;AF=1.00;AN=2;DP=206;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.80;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,206:206:99:5961,609,0 +NC_002945.4 804997 . T C 7945.77 . AC=2;AF=1.00;AN=2;DP=243;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,242:242:99:7974,721,0 +NC_002945.4 808092 . T C 10525.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.833;ClippingRankSum=0.000;DP=343;ExcessHet=3.0103;FS=4.209;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.96;ReadPosRankSum=0.319;SOR=1.082 GT:AD:DP:GQ:PL 1/1:1,339:340:99:10554,1001,0 +NC_002945.4 808601 . T G 11137.77 . AC=2;AF=1.00;AN=2;DP=373;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.86;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,373:373:99:11166,1112,0 +NC_002945.4 811737 . C A 8235.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.698;ClippingRankSum=0.000;DP=292;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.30;ReadPosRankSum=-0.582;SOR=0.772 GT:AD:DP:GQ:PL 1/1:2,289:291:99:8264,843,0 +NC_002945.4 812709 . G A 6893.77 . AC=2;AF=1.00;AN=2;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.79;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,204:204:99:6922,609,0 +NC_002945.4 828003 . C G 4476.77 . AC=2;AF=1.00;AN=2;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.53;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,142:142:99:4505,421,0 +NC_002945.4 838144 . N . . . . GT ./. +NC_002945.4 838145 . N . . . . GT ./. +NC_002945.4 838146 . N . . . . GT ./. +NC_002945.4 838147 . N . . . . GT ./. +NC_002945.4 838148 . N . . . . GT ./. +NC_002945.4 838149 . N . . . . GT ./. +NC_002945.4 838150 . N . . . . GT ./. +NC_002945.4 838151 . N . . . . GT ./. +NC_002945.4 838152 . N . . . . GT ./. +NC_002945.4 838153 . N . . . . GT ./. +NC_002945.4 838154 . N . . . . GT ./. +NC_002945.4 838155 . N . . . . GT ./. +NC_002945.4 838156 . N . . . . GT ./. +NC_002945.4 838157 . N . . . . GT ./. +NC_002945.4 838158 . N . . . . GT ./. +NC_002945.4 838159 . N . . . . GT ./. +NC_002945.4 838160 . N . . . . GT ./. +NC_002945.4 838161 . N . . . . GT ./. +NC_002945.4 838162 . N . . . . GT ./. +NC_002945.4 838163 . N . . . . GT ./. +NC_002945.4 838164 . N . . . . GT ./. +NC_002945.4 838165 . N . . . . GT ./. +NC_002945.4 838166 . N . . . . GT ./. +NC_002945.4 838167 . N . . . . GT ./. +NC_002945.4 838168 . N . . . . GT ./. +NC_002945.4 838169 . N . . . . GT ./. +NC_002945.4 838170 . N . . . . GT ./. +NC_002945.4 838171 . N . . . . GT ./. +NC_002945.4 838172 . N . . . . GT ./. +NC_002945.4 838173 . N . . . . GT ./. +NC_002945.4 838174 . N . . . . GT ./. +NC_002945.4 838175 . N . . . . GT ./. +NC_002945.4 838176 . N . . . . GT ./. +NC_002945.4 838177 . N . . . . GT ./. +NC_002945.4 838178 . N . . . . GT ./. +NC_002945.4 838179 . N . . . . GT ./. +NC_002945.4 838180 . N . . . . GT ./. +NC_002945.4 838181 . N . . . . GT ./. +NC_002945.4 838182 . N . . . . GT ./. +NC_002945.4 838183 . N . . . . GT ./. +NC_002945.4 838184 . N . . . . GT ./. +NC_002945.4 838185 . N . . . . GT ./. +NC_002945.4 838186 . N . . . . GT ./. +NC_002945.4 838187 . N . . . . GT ./. +NC_002945.4 838188 . N . . . . GT ./. +NC_002945.4 838189 . N . . . . GT ./. +NC_002945.4 838190 . N . . . . GT ./. +NC_002945.4 838191 . N . . . . GT ./. +NC_002945.4 838192 . N . . . . GT ./. +NC_002945.4 838193 . N . . . . GT ./. +NC_002945.4 838194 . N . . . . GT ./. +NC_002945.4 838195 . N . . . . GT ./. +NC_002945.4 838196 . N . . . . GT ./. +NC_002945.4 838197 . N . . . . GT ./. +NC_002945.4 838198 . N . . . . GT ./. +NC_002945.4 838199 . N . . . . GT ./. +NC_002945.4 838200 . N . . . . GT ./. +NC_002945.4 838201 . N . . . . GT ./. +NC_002945.4 838202 . N . . . . GT ./. +NC_002945.4 838203 . N . . . . GT ./. +NC_002945.4 838204 . N . . . . GT ./. +NC_002945.4 838205 . N . . . . GT ./. +NC_002945.4 838206 . N . . . . GT ./. +NC_002945.4 838207 . N . . . . GT ./. +NC_002945.4 838208 . N . . . . GT ./. +NC_002945.4 838209 . N . . . . GT ./. +NC_002945.4 838210 . N . . . . GT ./. +NC_002945.4 838211 . N . . . . GT ./. +NC_002945.4 838212 . N . . . . GT ./. +NC_002945.4 838213 . N . . . . GT ./. +NC_002945.4 838996 . N . . . . GT ./. +NC_002945.4 838997 . N . . . . GT ./. +NC_002945.4 838998 . N . . . . GT ./. +NC_002945.4 838999 . N . . . . GT ./. +NC_002945.4 839000 . N . . . . GT ./. +NC_002945.4 839001 . N . . . . GT ./. +NC_002945.4 839002 . N . . . . GT ./. +NC_002945.4 839003 . N . . . . GT ./. +NC_002945.4 839004 . N . . . . GT ./. +NC_002945.4 839005 . N . . . . GT ./. +NC_002945.4 839006 . N . . . . GT ./. +NC_002945.4 839007 . N . . . . GT ./. +NC_002945.4 839008 . N . . . . GT ./. +NC_002945.4 839009 . N . . . . GT ./. +NC_002945.4 839010 . N . . . . GT ./. +NC_002945.4 839011 . N . . . . GT ./. +NC_002945.4 839012 . N . . . . GT ./. +NC_002945.4 839013 . N . . . . GT ./. +NC_002945.4 839014 . N . . . . GT ./. +NC_002945.4 839015 . N . . . . GT ./. +NC_002945.4 839016 . N . . . . GT ./. +NC_002945.4 839017 . N . . . . GT ./. +NC_002945.4 839018 . N . . . . GT ./. +NC_002945.4 839019 . N . . . . GT ./. +NC_002945.4 839020 . N . . . . GT ./. +NC_002945.4 839021 . N . . . . GT ./. +NC_002945.4 839022 . N . . . . GT ./. +NC_002945.4 839023 . N . . . . GT ./. +NC_002945.4 839024 . N . . . . GT ./. +NC_002945.4 839025 . N . . . . GT ./. +NC_002945.4 839026 . N . . . . GT ./. +NC_002945.4 839027 . N . . . . GT ./. +NC_002945.4 839028 . N . . . . GT ./. +NC_002945.4 839029 . N . . . . GT ./. +NC_002945.4 839030 . N . . . . GT ./. +NC_002945.4 839031 . N . . . . GT ./. +NC_002945.4 839032 . N . . . . GT ./. +NC_002945.4 839033 . N . . . . GT ./. +NC_002945.4 839034 . N . . . . GT ./. +NC_002945.4 839035 . N . . . . GT ./. +NC_002945.4 839036 . N . . . . GT ./. +NC_002945.4 839037 . N . . . . GT ./. +NC_002945.4 839038 . N . . . . GT ./. +NC_002945.4 839039 . N . . . . GT ./. +NC_002945.4 839040 . N . . . . GT ./. +NC_002945.4 839041 . N . . . . GT ./. +NC_002945.4 839042 . N . . . . GT ./. +NC_002945.4 839043 . N . . . . GT ./. +NC_002945.4 839044 . N . . . . GT ./. +NC_002945.4 839045 . N . . . . GT ./. +NC_002945.4 839046 . N . . . . GT ./. +NC_002945.4 839047 . N . . . . GT ./. +NC_002945.4 839048 . N . . . . GT ./. +NC_002945.4 839049 . N . . . . GT ./. +NC_002945.4 839050 . N . . . . GT ./. +NC_002945.4 839051 . N . . . . GT ./. +NC_002945.4 839052 . N . . . . GT ./. +NC_002945.4 839053 . N . . . . GT ./. +NC_002945.4 839054 . N . . . . GT ./. +NC_002945.4 839055 . N . . . . GT ./. +NC_002945.4 839056 . N . . . . GT ./. +NC_002945.4 839057 . N . . . . GT ./. +NC_002945.4 839058 . N . . . . GT ./. +NC_002945.4 839059 . N . . . . GT ./. +NC_002945.4 839060 . N . . . . GT ./. +NC_002945.4 839061 . N . . . . GT ./. +NC_002945.4 839062 . N . . . . GT ./. +NC_002945.4 839063 . N . . . . GT ./. +NC_002945.4 839064 . N . . . . GT ./. +NC_002945.4 839065 . N . . . . GT ./. +NC_002945.4 839066 . N . . . . GT ./. +NC_002945.4 839067 . N . . . . GT ./. +NC_002945.4 839068 . N . . . . GT ./. +NC_002945.4 839069 . N . . . . GT ./. +NC_002945.4 839070 . N . . . . GT ./. +NC_002945.4 839071 . N . . . . GT ./. +NC_002945.4 839072 . N . . . . GT ./. +NC_002945.4 839073 . N . . . . GT ./. +NC_002945.4 839074 . N . . . . GT ./. +NC_002945.4 839075 . N . . . . GT ./. +NC_002945.4 839076 . N . . . . GT ./. +NC_002945.4 839077 . N . . . . GT ./. +NC_002945.4 839078 . N . . . . GT ./. +NC_002945.4 839079 . N . . . . GT ./. +NC_002945.4 839080 . N . . . . GT ./. +NC_002945.4 839081 . N . . . . GT ./. +NC_002945.4 839082 . N . . . . GT ./. +NC_002945.4 839083 . N . . . . GT ./. +NC_002945.4 839084 . N . . . . GT ./. +NC_002945.4 839085 . N . . . . GT ./. +NC_002945.4 839086 . N . . . . GT ./. +NC_002945.4 839087 . N . . . . GT ./. +NC_002945.4 839088 . N . . . . GT ./. +NC_002945.4 839089 . N . . . . GT ./. +NC_002945.4 839090 . N . . . . GT ./. +NC_002945.4 839091 . N . . . . GT ./. +NC_002945.4 839092 . N . . . . GT ./. +NC_002945.4 839093 . N . . . . GT ./. +NC_002945.4 839094 . N . . . . GT ./. +NC_002945.4 839095 . N . . . . GT ./. +NC_002945.4 839096 . N . . . . GT ./. +NC_002945.4 839097 . N . . . . GT ./. +NC_002945.4 839098 . N . . . . GT ./. +NC_002945.4 839099 . N . . . . GT ./. +NC_002945.4 839100 . N . . . . GT ./. +NC_002945.4 839101 . N . . . . GT ./. +NC_002945.4 839102 . N . . . . GT ./. +NC_002945.4 839103 . N . . . . GT ./. +NC_002945.4 839104 . N . . . . GT ./. +NC_002945.4 839105 . N . . . . GT ./. +NC_002945.4 839106 . N . . . . GT ./. +NC_002945.4 839107 . N . . . . GT ./. +NC_002945.4 839108 . N . . . . GT ./. +NC_002945.4 839109 . N . . . . GT ./. +NC_002945.4 839110 . N . . . . GT ./. +NC_002945.4 839111 . N . . . . GT ./. +NC_002945.4 839112 . N . . . . GT ./. +NC_002945.4 839113 . N . . . . GT ./. +NC_002945.4 839172 . N . . . . GT ./. +NC_002945.4 839173 . N . . . . GT ./. +NC_002945.4 839174 . N . . . . GT ./. +NC_002945.4 839175 . N . . . . GT ./. +NC_002945.4 839176 . N . . . . GT ./. +NC_002945.4 839177 . N . . . . GT ./. +NC_002945.4 839178 . N . . . . GT ./. +NC_002945.4 839179 . N . . . . GT ./. +NC_002945.4 839180 . N . . . . GT ./. +NC_002945.4 839308 . A G 375.77 . AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.45;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:404,30,0 +NC_002945.4 840813 . N . . . . GT ./. +NC_002945.4 840814 . N . . . . GT ./. +NC_002945.4 840815 . N . . . . GT ./. +NC_002945.4 840816 . N . . . . GT ./. +NC_002945.4 840817 . N . . . . GT ./. +NC_002945.4 840818 . N . . . . GT ./. +NC_002945.4 840819 . N . . . . GT ./. +NC_002945.4 840820 . N . . . . GT ./. +NC_002945.4 840821 . N . . . . GT ./. +NC_002945.4 840822 . N . . . . GT ./. +NC_002945.4 840823 . N . . . . GT ./. +NC_002945.4 840824 . N . . . . GT ./. +NC_002945.4 840825 . N . . . . GT ./. +NC_002945.4 840826 . N . . . . GT ./. +NC_002945.4 840827 . N . . . . GT ./. +NC_002945.4 840828 . N . . . . GT ./. +NC_002945.4 840829 . N . . . . GT ./. +NC_002945.4 840830 . N . . . . GT ./. +NC_002945.4 840831 . N . . . . GT ./. +NC_002945.4 840832 . N . . . . GT ./. +NC_002945.4 840833 . N . . . . GT ./. +NC_002945.4 840834 . N . . . . GT ./. +NC_002945.4 840835 . N . . . . GT ./. +NC_002945.4 840836 . N . . . . GT ./. +NC_002945.4 840837 . N . . . . GT ./. +NC_002945.4 840838 . N . . . . GT ./. +NC_002945.4 840839 . N . . . . GT ./. +NC_002945.4 840840 . N . . . . GT ./. +NC_002945.4 840841 . N . . . . GT ./. +NC_002945.4 840842 . N . . . . GT ./. +NC_002945.4 840843 . N . . . . GT ./. +NC_002945.4 840844 . N . . . . GT ./. +NC_002945.4 840845 . N . . . . GT ./. +NC_002945.4 840846 . N . . . . GT ./. +NC_002945.4 840847 . N . . . . GT ./. +NC_002945.4 840848 . N . . . . GT ./. +NC_002945.4 840849 . N . . . . GT ./. +NC_002945.4 840850 . N . . . . GT ./. +NC_002945.4 840851 . N . . . . GT ./. +NC_002945.4 840852 . N . . . . GT ./. +NC_002945.4 840853 . N . . . . GT ./. +NC_002945.4 840854 . N . . . . GT ./. +NC_002945.4 840855 . N . . . . GT ./. +NC_002945.4 840856 . N . . . . GT ./. +NC_002945.4 840857 . N . . . . GT ./. +NC_002945.4 840858 . N . . . . GT ./. +NC_002945.4 840859 . N . . . . GT ./. +NC_002945.4 840860 . N . . . . GT ./. +NC_002945.4 840861 . N . . . . GT ./. +NC_002945.4 840862 . N . . . . GT ./. +NC_002945.4 840863 . N . . . . GT ./. +NC_002945.4 840864 . N . . . . GT ./. +NC_002945.4 840865 . N . . . . GT ./. +NC_002945.4 840866 . N . . . . GT ./. +NC_002945.4 840867 . N . . . . GT ./. +NC_002945.4 840868 . N . . . . GT ./. +NC_002945.4 840869 . N . . . . GT ./. +NC_002945.4 840870 . N . . . . GT ./. +NC_002945.4 840871 . N . . . . GT ./. +NC_002945.4 840872 . N . . . . GT ./. +NC_002945.4 840873 . N . . . . GT ./. +NC_002945.4 840874 . N . . . . GT ./. +NC_002945.4 840875 . N . . . . GT ./. +NC_002945.4 840876 . N . . . . GT ./. +NC_002945.4 840877 . N . . . . GT ./. +NC_002945.4 840878 . N . . . . GT ./. +NC_002945.4 840879 . N . . . . GT ./. +NC_002945.4 840880 . N . . . . GT ./. +NC_002945.4 840881 . N . . . . GT ./. +NC_002945.4 840882 . N . . . . GT ./. +NC_002945.4 840883 . N . . . . GT ./. +NC_002945.4 840884 . N . . . . GT ./. +NC_002945.4 840885 . N . . . . GT ./. +NC_002945.4 840886 . N . . . . GT ./. +NC_002945.4 840887 . N . . . . GT ./. +NC_002945.4 840888 . N . . . . GT ./. +NC_002945.4 840889 . N . . . . GT ./. +NC_002945.4 840890 . N . . . . GT ./. +NC_002945.4 840891 . N . . . . GT ./. +NC_002945.4 840892 . N . . . . GT ./. +NC_002945.4 840893 . N . . . . GT ./. +NC_002945.4 840894 . N . . . . GT ./. +NC_002945.4 840895 . N . . . . GT ./. +NC_002945.4 840896 . N . . . . GT ./. +NC_002945.4 840897 . N . . . . GT ./. +NC_002945.4 840898 . N . . . . GT ./. +NC_002945.4 840899 . N . . . . GT ./. +NC_002945.4 840900 . N . . . . GT ./. +NC_002945.4 840901 . N . . . . GT ./. +NC_002945.4 840902 . N . . . . GT ./. +NC_002945.4 840903 . N . . . . GT ./. +NC_002945.4 840904 . N . . . . GT ./. +NC_002945.4 840905 . N . . . . GT ./. +NC_002945.4 840906 . N . . . . GT ./. +NC_002945.4 840907 . N . . . . GT ./. +NC_002945.4 840908 . N . . . . GT ./. +NC_002945.4 840909 . N . . . . GT ./. +NC_002945.4 840910 . N . . . . GT ./. +NC_002945.4 840911 . N . . . . GT ./. +NC_002945.4 840912 . N . . . . GT ./. +NC_002945.4 840913 . N . . . . GT ./. +NC_002945.4 840914 . N . . . . GT ./. +NC_002945.4 840915 . N . . . . GT ./. +NC_002945.4 840916 . N . . . . GT ./. +NC_002945.4 840917 . N . . . . GT ./. +NC_002945.4 840918 . N . . . . GT ./. +NC_002945.4 840919 . N . . . . GT ./. +NC_002945.4 840920 . N . . . . GT ./. +NC_002945.4 840921 . N . . . . GT ./. +NC_002945.4 840922 . N . . . . GT ./. +NC_002945.4 840923 . N . . . . GT ./. +NC_002945.4 840924 . N . . . . GT ./. +NC_002945.4 840925 . N . . . . GT ./. +NC_002945.4 840926 . N . . . . GT ./. +NC_002945.4 840927 . N . . . . GT ./. +NC_002945.4 840928 . N . . . . GT ./. +NC_002945.4 840929 . N . . . . GT ./. +NC_002945.4 840930 . N . . . . GT ./. +NC_002945.4 840931 . N . . . . GT ./. +NC_002945.4 840932 . N . . . . GT ./. +NC_002945.4 840933 . N . . . . GT ./. +NC_002945.4 840934 . N . . . . GT ./. +NC_002945.4 840935 . N . . . . GT ./. +NC_002945.4 840936 . N . . . . GT ./. +NC_002945.4 840937 . N . . . . GT ./. +NC_002945.4 840938 . N . . . . GT ./. +NC_002945.4 840939 . N . . . . GT ./. +NC_002945.4 840940 . N . . . . GT ./. +NC_002945.4 840941 . N . . . . GT ./. +NC_002945.4 840942 . N . . . . GT ./. +NC_002945.4 840943 . N . . . . GT ./. +NC_002945.4 840944 . N . . . . GT ./. +NC_002945.4 840945 . N . . . . GT ./. +NC_002945.4 840946 . N . . . . GT ./. +NC_002945.4 840947 . N . . . . GT ./. +NC_002945.4 840948 . N . . . . GT ./. +NC_002945.4 840949 . N . . . . GT ./. +NC_002945.4 840950 . N . . . . GT ./. +NC_002945.4 840951 . N . . . . GT ./. +NC_002945.4 840952 . N . . . . GT ./. +NC_002945.4 840953 . N . . . . GT ./. +NC_002945.4 840954 . N . . . . GT ./. +NC_002945.4 840955 . N . . . . GT ./. +NC_002945.4 840956 . N . . . . GT ./. +NC_002945.4 840957 . N . . . . GT ./. +NC_002945.4 840958 . N . . . . GT ./. +NC_002945.4 840959 . N . . . . GT ./. +NC_002945.4 840960 . N . . . . GT ./. +NC_002945.4 840961 . N . . . . GT ./. +NC_002945.4 840962 . N . . . . GT ./. +NC_002945.4 840963 . N . . . . GT ./. +NC_002945.4 840964 . N . . . . GT ./. +NC_002945.4 840965 . N . . . . GT ./. +NC_002945.4 840966 . N . . . . GT ./. +NC_002945.4 840967 . N . . . . GT ./. +NC_002945.4 840968 . N . . . . GT ./. +NC_002945.4 840969 . N . . . . GT ./. +NC_002945.4 840970 . N . . . . GT ./. +NC_002945.4 840971 . N . . . . GT ./. +NC_002945.4 840972 . N . . . . GT ./. +NC_002945.4 840973 . N . . . . GT ./. +NC_002945.4 840974 . N . . . . GT ./. +NC_002945.4 840975 . N . . . . GT ./. +NC_002945.4 840976 . N . . . . GT ./. +NC_002945.4 840977 . N . . . . GT ./. +NC_002945.4 840978 . N . . . . GT ./. +NC_002945.4 840979 . N . . . . GT ./. +NC_002945.4 840980 . N . . . . GT ./. +NC_002945.4 840981 . N . . . . GT ./. +NC_002945.4 840982 . N . . . . GT ./. +NC_002945.4 840983 . N . . . . GT ./. +NC_002945.4 840984 . N . . . . GT ./. +NC_002945.4 840985 . N . . . . GT ./. +NC_002945.4 840986 . N . . . . GT ./. +NC_002945.4 840987 . N . . . . GT ./. +NC_002945.4 840988 . N . . . . GT ./. +NC_002945.4 840989 . N . . . . GT ./. +NC_002945.4 840990 . N . . . . GT ./. +NC_002945.4 840991 . N . . . . GT ./. +NC_002945.4 840992 . N . . . . GT ./. +NC_002945.4 840993 . N . . . . GT ./. +NC_002945.4 840994 . N . . . . GT ./. +NC_002945.4 840995 . N . . . . GT ./. +NC_002945.4 840996 . N . . . . GT ./. +NC_002945.4 840997 . N . . . . GT ./. +NC_002945.4 840998 . N . . . . GT ./. +NC_002945.4 840999 . N . . . . GT ./. +NC_002945.4 841000 . N . . . . GT ./. +NC_002945.4 841001 . N . . . . GT ./. +NC_002945.4 841002 . N . . . . GT ./. +NC_002945.4 841003 . N . . . . GT ./. +NC_002945.4 841004 . N . . . . GT ./. +NC_002945.4 841005 . N . . . . GT ./. +NC_002945.4 841006 . N . . . . GT ./. +NC_002945.4 841007 . N . . . . GT ./. +NC_002945.4 841008 . N . . . . GT ./. +NC_002945.4 841009 . N . . . . GT ./. +NC_002945.4 841010 . N . . . . GT ./. +NC_002945.4 841011 . N . . . . GT ./. +NC_002945.4 841012 . N . . . . GT ./. +NC_002945.4 841013 . N . . . . GT ./. +NC_002945.4 841014 . N . . . . GT ./. +NC_002945.4 841015 . N . . . . GT ./. +NC_002945.4 841016 . N . . . . GT ./. +NC_002945.4 841017 . N . . . . GT ./. +NC_002945.4 841018 . N . . . . GT ./. +NC_002945.4 841019 . N . . . . GT ./. +NC_002945.4 841020 . N . . . . GT ./. +NC_002945.4 841021 . N . . . . GT ./. +NC_002945.4 841022 . N . . . . GT ./. +NC_002945.4 841023 . N . . . . GT ./. +NC_002945.4 841024 . N . . . . GT ./. +NC_002945.4 841025 . N . . . . GT ./. +NC_002945.4 841026 . N . . . . GT ./. +NC_002945.4 841027 . N . . . . GT ./. +NC_002945.4 841028 . N . . . . GT ./. +NC_002945.4 841029 . N . . . . GT ./. +NC_002945.4 841030 . N . . . . GT ./. +NC_002945.4 841031 . N . . . . GT ./. +NC_002945.4 841032 . N . . . . GT ./. +NC_002945.4 841033 . N . . . . GT ./. +NC_002945.4 841034 . N . . . . GT ./. +NC_002945.4 841035 . N . . . . GT ./. +NC_002945.4 841036 . N . . . . GT ./. +NC_002945.4 841037 . N . . . . GT ./. +NC_002945.4 841038 . N . . . . GT ./. +NC_002945.4 841039 . N . . . . GT ./. +NC_002945.4 841040 . N . . . . GT ./. +NC_002945.4 841041 . N . . . . GT ./. +NC_002945.4 841042 . N . . . . GT ./. +NC_002945.4 841043 . N . . . . GT ./. +NC_002945.4 841044 . N . . . . GT ./. +NC_002945.4 841045 . N . . . . GT ./. +NC_002945.4 841046 . N . . . . GT ./. +NC_002945.4 841047 . N . . . . GT ./. +NC_002945.4 841048 . N . . . . GT ./. +NC_002945.4 841049 . N . . . . GT ./. +NC_002945.4 841050 . N . . . . GT ./. +NC_002945.4 841051 . N . . . . GT ./. +NC_002945.4 841052 . N . . . . GT ./. +NC_002945.4 841053 . N . . . . GT ./. +NC_002945.4 841054 . N . . . . GT ./. +NC_002945.4 841055 . N . . . . GT ./. +NC_002945.4 841056 . N . . . . GT ./. +NC_002945.4 841057 . N . . . . GT ./. +NC_002945.4 841058 . N . . . . GT ./. +NC_002945.4 841059 . N . . . . GT ./. +NC_002945.4 841060 . N . . . . GT ./. +NC_002945.4 841061 . N . . . . GT ./. +NC_002945.4 841062 . N . . . . GT ./. +NC_002945.4 841063 . N . . . . GT ./. +NC_002945.4 841064 . N . . . . GT ./. +NC_002945.4 841065 . N . . . . GT ./. +NC_002945.4 841066 . N . . . . GT ./. +NC_002945.4 841067 . N . . . . GT ./. +NC_002945.4 841068 . N . . . . GT ./. +NC_002945.4 841069 . N . . . . GT ./. +NC_002945.4 841070 . N . . . . GT ./. +NC_002945.4 841071 . N . . . . GT ./. +NC_002945.4 841072 . N . . . . GT ./. +NC_002945.4 841073 . N . . . . GT ./. +NC_002945.4 841074 . N . . . . GT ./. +NC_002945.4 841075 . N . . . . GT ./. +NC_002945.4 841076 . N . . . . GT ./. +NC_002945.4 841077 . N . . . . GT ./. +NC_002945.4 841078 . N . . . . GT ./. +NC_002945.4 841079 . N . . . . GT ./. +NC_002945.4 841080 . N . . . . GT ./. +NC_002945.4 841081 . N . . . . GT ./. +NC_002945.4 841082 . N . . . . GT ./. +NC_002945.4 841083 . N . . . . GT ./. +NC_002945.4 841084 . N . . . . GT ./. +NC_002945.4 841085 . N . . . . GT ./. +NC_002945.4 841086 . N . . . . GT ./. +NC_002945.4 841087 . N . . . . GT ./. +NC_002945.4 841088 . N . . . . GT ./. +NC_002945.4 841089 . N . . . . GT ./. +NC_002945.4 841090 . N . . . . GT ./. +NC_002945.4 841091 . N . . . . GT ./. +NC_002945.4 841092 . N . . . . GT ./. +NC_002945.4 841093 . N . . . . GT ./. +NC_002945.4 841094 . N . . . . GT ./. +NC_002945.4 841095 . N . . . . GT ./. +NC_002945.4 841096 . N . . . . GT ./. +NC_002945.4 841097 . N . . . . GT ./. +NC_002945.4 841098 . N . . . . GT ./. +NC_002945.4 841099 . N . . . . GT ./. +NC_002945.4 841100 . N . . . . GT ./. +NC_002945.4 841101 . N . . . . GT ./. +NC_002945.4 841102 . N . . . . GT ./. +NC_002945.4 841103 . N . . . . GT ./. +NC_002945.4 841104 . N . . . . GT ./. +NC_002945.4 841105 . N . . . . GT ./. +NC_002945.4 841106 . N . . . . GT ./. +NC_002945.4 841107 . N . . . . GT ./. +NC_002945.4 841108 . N . . . . GT ./. +NC_002945.4 841109 . N . . . . GT ./. +NC_002945.4 841110 . N . . . . GT ./. +NC_002945.4 841111 . N . . . . GT ./. +NC_002945.4 841112 . N . . . . GT ./. +NC_002945.4 841113 . N . . . . GT ./. +NC_002945.4 841114 . N . . . . GT ./. +NC_002945.4 841115 . N . . . . GT ./. +NC_002945.4 841116 . N . . . . GT ./. +NC_002945.4 841117 . N . . . . GT ./. +NC_002945.4 841118 . N . . . . GT ./. +NC_002945.4 841119 . N . . . . GT ./. +NC_002945.4 841120 . N . . . . GT ./. +NC_002945.4 841121 . N . . . . GT ./. +NC_002945.4 841122 . N . . . . GT ./. +NC_002945.4 841123 . N . . . . GT ./. +NC_002945.4 841124 . N . . . . GT ./. +NC_002945.4 841125 . N . . . . GT ./. +NC_002945.4 841126 . N . . . . GT ./. +NC_002945.4 841127 . N . . . . GT ./. +NC_002945.4 841128 . N . . . . GT ./. +NC_002945.4 841129 . N . . . . GT ./. +NC_002945.4 841130 . N . . . . GT ./. +NC_002945.4 841131 . N . . . . GT ./. +NC_002945.4 841132 . N . . . . GT ./. +NC_002945.4 841133 . N . . . . GT ./. +NC_002945.4 841134 . N . . . . GT ./. +NC_002945.4 841135 . N . . . . GT ./. +NC_002945.4 841136 . N . . . . GT ./. +NC_002945.4 841137 . N . . . . GT ./. +NC_002945.4 841138 . N . . . . GT ./. +NC_002945.4 841139 . N . . . . GT ./. +NC_002945.4 841140 . N . . . . GT ./. +NC_002945.4 841141 . N . . . . GT ./. +NC_002945.4 841142 . N . . . . GT ./. +NC_002945.4 841143 . N . . . . GT ./. +NC_002945.4 841144 . N . . . . GT ./. +NC_002945.4 841145 . N . . . . GT ./. +NC_002945.4 841146 . N . . . . GT ./. +NC_002945.4 841147 . N . . . . GT ./. +NC_002945.4 841148 . N . . . . GT ./. +NC_002945.4 841149 . N . . . . GT ./. +NC_002945.4 841150 . N . . . . GT ./. +NC_002945.4 841151 . N . . . . GT ./. +NC_002945.4 841152 . N . . . . GT ./. +NC_002945.4 841153 . N . . . . GT ./. +NC_002945.4 841154 . N . . . . GT ./. +NC_002945.4 841155 . N . . . . GT ./. +NC_002945.4 841156 . N . . . . GT ./. +NC_002945.4 841157 . N . . . . GT ./. +NC_002945.4 841158 . N . . . . GT ./. +NC_002945.4 841159 . N . . . . GT ./. +NC_002945.4 841160 . N . . . . GT ./. +NC_002945.4 841161 . N . . . . GT ./. +NC_002945.4 841162 . N . . . . GT ./. +NC_002945.4 841163 . N . . . . GT ./. +NC_002945.4 841164 . N . . . . GT ./. +NC_002945.4 841165 . N . . . . GT ./. +NC_002945.4 841166 . N . . . . GT ./. +NC_002945.4 841167 . N . . . . GT ./. +NC_002945.4 841168 . N . . . . GT ./. +NC_002945.4 841169 . N . . . . GT ./. +NC_002945.4 841170 . N . . . . GT ./. +NC_002945.4 841171 . N . . . . GT ./. +NC_002945.4 841172 . N . . . . GT ./. +NC_002945.4 841173 . N . . . . GT ./. +NC_002945.4 841174 . N . . . . GT ./. +NC_002945.4 841175 . N . . . . GT ./. +NC_002945.4 841176 . N . . . . GT ./. +NC_002945.4 841177 . N . . . . GT ./. +NC_002945.4 841178 . N . . . . GT ./. +NC_002945.4 841179 . N . . . . GT ./. +NC_002945.4 841180 . N . . . . GT ./. +NC_002945.4 841181 . N . . . . GT ./. +NC_002945.4 841182 . N . . . . GT ./. +NC_002945.4 841183 . N . . . . GT ./. +NC_002945.4 841184 . N . . . . GT ./. +NC_002945.4 841185 . N . . . . GT ./. +NC_002945.4 841186 . N . . . . GT ./. +NC_002945.4 841187 . N . . . . GT ./. +NC_002945.4 841188 . N . . . . GT ./. +NC_002945.4 841189 . N . . . . GT ./. +NC_002945.4 841190 . N . . . . GT ./. +NC_002945.4 841191 . N . . . . GT ./. +NC_002945.4 841192 . N . . . . GT ./. +NC_002945.4 841193 . N . . . . GT ./. +NC_002945.4 841194 . N . . . . GT ./. +NC_002945.4 841195 . N . . . . GT ./. +NC_002945.4 841196 . N . . . . GT ./. +NC_002945.4 841197 . N . . . . GT ./. +NC_002945.4 841198 . N . . . . GT ./. +NC_002945.4 841199 . N . . . . GT ./. +NC_002945.4 841200 . N . . . . GT ./. +NC_002945.4 841201 . N . . . . GT ./. +NC_002945.4 841202 . N . . . . GT ./. +NC_002945.4 841203 . N . . . . GT ./. +NC_002945.4 842360 . N . . . . GT ./. +NC_002945.4 842361 . N . . . . GT ./. +NC_002945.4 842362 . N . . . . GT ./. +NC_002945.4 842363 . N . . . . GT ./. +NC_002945.4 842364 . N . . . . GT ./. +NC_002945.4 842365 . N . . . . GT ./. +NC_002945.4 842366 . N . . . . GT ./. +NC_002945.4 842367 . N . . . . GT ./. +NC_002945.4 842368 . N . . . . GT ./. +NC_002945.4 842369 . N . . . . GT ./. +NC_002945.4 842370 . N . . . . GT ./. +NC_002945.4 842371 . N . . . . GT ./. +NC_002945.4 842372 . N . . . . GT ./. +NC_002945.4 842373 . N . . . . GT ./. +NC_002945.4 842374 . N . . . . GT ./. +NC_002945.4 842375 . N . . . . GT ./. +NC_002945.4 842376 . N . . . . GT ./. +NC_002945.4 842377 . N . . . . GT ./. +NC_002945.4 842378 . N . . . . GT ./. +NC_002945.4 842379 . N . . . . GT ./. +NC_002945.4 842380 . N . . . . GT ./. +NC_002945.4 842381 . N . . . . GT ./. +NC_002945.4 842382 . N . . . . GT ./. +NC_002945.4 842383 . N . . . . GT ./. +NC_002945.4 842384 . N . . . . GT ./. +NC_002945.4 842385 . N . . . . GT ./. +NC_002945.4 855884 . A G 20.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=-5.728;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=180.018;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=0.14;ReadPosRankSum=-2.646;SOR=5.205 GT:AD:DP:GQ:PL 0/1:127,27:154:49:49,0,3313 +NC_002945.4 865821 . G T 7081.77 . AC=2;AF=1.00;AN=2;DP=232;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.52;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,232:232:99:7110,690,0 +NC_002945.4 866123 . C T 7447.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.857;ClippingRankSum=0.000;DP=256;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.44;ReadPosRankSum=1.415;SOR=0.243 GT:AD:DP:GQ:PL 1/1:1,252:253:99:7476,742,0 +NC_002945.4 870116 . G T 4189.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.021;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.31;ReadPosRankSum=-0.397;SOR=0.290 GT:AD:DP:GQ:PL 1/1:1,147:148:99:4218,431,0 +NC_002945.4 905912 . C G 7189.77 . AC=2;AF=1.00;AN=2;DP=229;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.67;SOR=1.497 GT:AD:DP:GQ:PL 1/1:0,227:227:99:7218,676,0 +NC_002945.4 926342 . N . . . . GT ./. +NC_002945.4 926343 . N . . . . GT ./. +NC_002945.4 926344 . N . . . . GT ./. +NC_002945.4 926345 . N . . . . GT ./. +NC_002945.4 926346 . N . . . . GT ./. +NC_002945.4 926347 . N . . . . GT ./. +NC_002945.4 926348 . N . . . . GT ./. +NC_002945.4 926349 . N . . . . GT ./. +NC_002945.4 926350 . N . . . . GT ./. +NC_002945.4 926351 . N . . . . GT ./. +NC_002945.4 926352 . N . . . . GT ./. +NC_002945.4 926572 . N . . . . GT ./. +NC_002945.4 926573 . N . . . . GT ./. +NC_002945.4 926574 . N . . . . GT ./. +NC_002945.4 926575 . N . . . . GT ./. +NC_002945.4 926576 . N . . . . GT ./. +NC_002945.4 926689 . N . . . . GT ./. +NC_002945.4 926690 . N . . . . GT ./. +NC_002945.4 926691 . N . . . . GT ./. +NC_002945.4 926692 . N . . . . GT ./. +NC_002945.4 926693 . N . . . . GT ./. +NC_002945.4 926694 . N . . . . GT ./. +NC_002945.4 926695 . N . . . . GT ./. +NC_002945.4 926696 . N . . . . GT ./. +NC_002945.4 926697 . N . . . . GT ./. +NC_002945.4 926698 . N . . . . GT ./. +NC_002945.4 926699 . N . . . . GT ./. +NC_002945.4 926700 . N . . . . GT ./. +NC_002945.4 926701 . N . . . . GT ./. +NC_002945.4 926702 . N . . . . GT ./. +NC_002945.4 926703 . N . . . . GT ./. +NC_002945.4 926704 . N . . . . GT ./. +NC_002945.4 926705 . N . . . . GT ./. +NC_002945.4 926706 . N . . . . GT ./. +NC_002945.4 926707 . N . . . . GT ./. +NC_002945.4 926708 . N . . . . GT ./. +NC_002945.4 926709 . N . . . . GT ./. +NC_002945.4 926710 . N . . . . GT ./. +NC_002945.4 926711 . N . . . . GT ./. +NC_002945.4 926712 . N . . . . GT ./. +NC_002945.4 926713 . N . . . . GT ./. +NC_002945.4 926714 . N . . . . GT ./. +NC_002945.4 926715 . N . . . . GT ./. +NC_002945.4 926716 . N . . . . GT ./. +NC_002945.4 926717 . N . . . . GT ./. +NC_002945.4 926718 . N . . . . GT ./. +NC_002945.4 926719 . N . . . . GT ./. +NC_002945.4 926720 . N . . . . GT ./. +NC_002945.4 926721 . N . . . . GT ./. +NC_002945.4 926722 . N . . . . GT ./. +NC_002945.4 926723 . N . . . . GT ./. +NC_002945.4 926724 . N . . . . GT ./. +NC_002945.4 926848 . N . . . . GT ./. +NC_002945.4 926849 . N . . . . GT ./. +NC_002945.4 926850 . N . . . . GT ./. +NC_002945.4 926851 . N . . . . GT ./. +NC_002945.4 926852 . N . . . . GT ./. +NC_002945.4 926853 . N . . . . GT ./. +NC_002945.4 926854 . N . . . . GT ./. +NC_002945.4 926855 . N . . . . GT ./. +NC_002945.4 926856 . N . . . . GT ./. +NC_002945.4 926857 . N . . . . GT ./. +NC_002945.4 926858 . N . . . . GT ./. +NC_002945.4 926859 . N . . . . GT ./. +NC_002945.4 926860 . N . . . . GT ./. +NC_002945.4 926861 . N . . . . GT ./. +NC_002945.4 926862 . N . . . . GT ./. +NC_002945.4 926863 . N . . . . GT ./. +NC_002945.4 926864 . N . . . . GT ./. +NC_002945.4 926865 . N . . . . GT ./. +NC_002945.4 926866 . N . . . . GT ./. +NC_002945.4 926867 . N . . . . GT ./. +NC_002945.4 926868 . N . . . . GT ./. +NC_002945.4 926869 . N . . . . GT ./. +NC_002945.4 926870 . N . . . . GT ./. +NC_002945.4 926871 . N . . . . GT ./. +NC_002945.4 926872 . N . . . . GT ./. +NC_002945.4 926873 . N . . . . GT ./. +NC_002945.4 926874 . N . . . . GT ./. +NC_002945.4 926875 . N . . . . GT ./. +NC_002945.4 926876 . N . . . . GT ./. +NC_002945.4 926877 . N . . . . GT ./. +NC_002945.4 926878 . N . . . . GT ./. +NC_002945.4 926879 . N . . . . GT ./. +NC_002945.4 926880 . N . . . . GT ./. +NC_002945.4 926881 . N . . . . GT ./. +NC_002945.4 926882 . N . . . . GT ./. +NC_002945.4 926883 . N . . . . GT ./. +NC_002945.4 926884 . N . . . . GT ./. +NC_002945.4 926885 . N . . . . GT ./. +NC_002945.4 926886 . N . . . . GT ./. +NC_002945.4 926887 . N . . . . GT ./. +NC_002945.4 926888 . N . . . . GT ./. +NC_002945.4 926889 . N . . . . GT ./. +NC_002945.4 926890 . N . . . . GT ./. +NC_002945.4 926891 . N . . . . GT ./. +NC_002945.4 926892 . N . . . . GT ./. +NC_002945.4 926893 . N . . . . GT ./. +NC_002945.4 926894 . N . . . . GT ./. +NC_002945.4 926895 . N . . . . GT ./. +NC_002945.4 926896 . N . . . . GT ./. +NC_002945.4 926897 . N . . . . GT ./. +NC_002945.4 926898 . N . . . . GT ./. +NC_002945.4 926899 . N . . . . GT ./. +NC_002945.4 926900 . N . . . . GT ./. +NC_002945.4 926901 . N . . . . GT ./. +NC_002945.4 926902 . N . . . . GT ./. +NC_002945.4 926903 . N . . . . GT ./. +NC_002945.4 926904 . N . . . . GT ./. +NC_002945.4 926905 . N . . . . GT ./. +NC_002945.4 926906 . N . . . . GT ./. +NC_002945.4 926907 . N . . . . GT ./. +NC_002945.4 926908 . N . . . . GT ./. +NC_002945.4 926909 . N . . . . GT ./. +NC_002945.4 926910 . N . . . . GT ./. +NC_002945.4 926911 . N . . . . GT ./. +NC_002945.4 926912 . N . . . . GT ./. +NC_002945.4 926913 . N . . . . GT ./. +NC_002945.4 926914 . N . . . . GT ./. +NC_002945.4 926915 . N . . . . GT ./. +NC_002945.4 926916 . N . . . . GT ./. +NC_002945.4 926917 . N . . . . GT ./. +NC_002945.4 926918 . N . . . . GT ./. +NC_002945.4 926919 . N . . . . GT ./. +NC_002945.4 926920 . N . . . . GT ./. +NC_002945.4 926921 . N . . . . GT ./. +NC_002945.4 926922 . N . . . . GT ./. +NC_002945.4 926923 . N . . . . GT ./. +NC_002945.4 926924 . N . . . . GT ./. +NC_002945.4 926925 . N . . . . GT ./. +NC_002945.4 926926 . N . . . . GT ./. +NC_002945.4 926927 . N . . . . GT ./. +NC_002945.4 926928 . N . . . . GT ./. +NC_002945.4 926929 . N . . . . GT ./. +NC_002945.4 927689 . N . . . . GT ./. +NC_002945.4 927690 . N . . . . GT ./. +NC_002945.4 927691 . N . . . . GT ./. +NC_002945.4 927692 . N . . . . GT ./. +NC_002945.4 927693 . N . . . . GT ./. +NC_002945.4 927694 . N . . . . GT ./. +NC_002945.4 927695 . N . . . . GT ./. +NC_002945.4 927696 . N . . . . GT ./. +NC_002945.4 927697 . N . . . . GT ./. +NC_002945.4 927698 . N . . . . GT ./. +NC_002945.4 927699 . N . . . . GT ./. +NC_002945.4 927700 . N . . . . GT ./. +NC_002945.4 927701 . N . . . . GT ./. +NC_002945.4 927702 . N . . . . GT ./. +NC_002945.4 927703 . N . . . . GT ./. +NC_002945.4 927704 . N . . . . GT ./. +NC_002945.4 927705 . N . . . . GT ./. +NC_002945.4 927706 . N . . . . GT ./. +NC_002945.4 927707 . N . . . . GT ./. +NC_002945.4 927708 . N . . . . GT ./. +NC_002945.4 927709 . N . . . . GT ./. +NC_002945.4 927710 . N . . . . GT ./. +NC_002945.4 927711 . N . . . . GT ./. +NC_002945.4 927712 . N . . . . GT ./. +NC_002945.4 927713 . N . . . . GT ./. +NC_002945.4 927714 . N . . . . GT ./. +NC_002945.4 927715 . N . . . . GT ./. +NC_002945.4 927716 . N . . . . GT ./. +NC_002945.4 927717 . N . . . . GT ./. +NC_002945.4 927718 . N . . . . GT ./. +NC_002945.4 927719 . N . . . . GT ./. +NC_002945.4 927720 . N . . . . GT ./. +NC_002945.4 927721 . N . . . . GT ./. +NC_002945.4 927722 . N . . . . GT ./. +NC_002945.4 927723 . N . . . . GT ./. +NC_002945.4 927724 . N . . . . GT ./. +NC_002945.4 927725 . N . . . . GT ./. +NC_002945.4 927726 . N . . . . GT ./. +NC_002945.4 927727 . N . . . . GT ./. +NC_002945.4 927728 . N . . . . GT ./. +NC_002945.4 927729 . N . . . . GT ./. +NC_002945.4 927730 . N . . . . GT ./. +NC_002945.4 927731 . N . . . . GT ./. +NC_002945.4 927732 . N . . . . GT ./. +NC_002945.4 927733 . N . . . . GT ./. +NC_002945.4 927734 . N . . . . GT ./. +NC_002945.4 927735 . N . . . . GT ./. +NC_002945.4 927736 . N . . . . GT ./. +NC_002945.4 927737 . N . . . . GT ./. +NC_002945.4 927738 . N . . . . GT ./. +NC_002945.4 927739 . N . . . . GT ./. +NC_002945.4 927740 . N . . . . GT ./. +NC_002945.4 927741 . N . . . . GT ./. +NC_002945.4 927742 . N . . . . GT ./. +NC_002945.4 927743 . N . . . . GT ./. +NC_002945.4 927744 . N . . . . GT ./. +NC_002945.4 927745 . N . . . . GT ./. +NC_002945.4 927746 . N . . . . GT ./. +NC_002945.4 927747 . N . . . . GT ./. +NC_002945.4 927748 . N . . . . GT ./. +NC_002945.4 927749 . N . . . . GT ./. +NC_002945.4 927750 . N . . . . GT ./. +NC_002945.4 927751 . N . . . . GT ./. +NC_002945.4 927752 . N . . . . GT ./. +NC_002945.4 927753 . N . . . . GT ./. +NC_002945.4 927754 . N . . . . GT ./. +NC_002945.4 927755 . N . . . . GT ./. +NC_002945.4 927756 . N . . . . GT ./. +NC_002945.4 927757 . N . . . . GT ./. +NC_002945.4 927758 . N . . . . GT ./. +NC_002945.4 927759 . N . . . . GT ./. +NC_002945.4 928976 . G A 1961.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.343;ClippingRankSum=0.000;DP=148;ExcessHet=3.0103;FS=5.393;MLEAC=1;MLEAF=0.500;MQ=59.54;MQRankSum=0.963;QD=13.35;ReadPosRankSum=-7.884;SOR=1.170 GT:AD:DP:GQ:PL 0/1:68,79:147:99:1990,0,4143 +NC_002945.4 928982 . G A 1892.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.315;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=7.758;MLEAC=1;MLEAF=0.500;MQ=59.34;MQRankSum=0.339;QD=25.24;ReadPosRankSum=-2.745;SOR=2.245 GT:AD:DP:GQ:PL 0/1:73,2:75:99:1921,0,4143 +NC_002945.4 941068 . A C 8058.77 . AC=2;AF=1.00;AN=2;DP=260;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.11;SOR=1.375 GT:AD:DP:GQ:PL 1/1:0,259:259:99:8087,772,0 +NC_002945.4 943719 . G A 8250.77 . AC=2;AF=1.00;AN=2;DP=299;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.59;SOR=0.937 GT:AD:DP:GQ:PL 1/1:0,299:299:99:8279,889,0 +NC_002945.4 946102 . G T 8300.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.231;ClippingRankSum=0.000;DP=313;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=26.61;ReadPosRankSum=3.137;SOR=0.530 GT:AD:DP:GQ:PL 1/1:3,309:312:99:8329,890,0 +NC_002945.4 967989 . T C 9648.77 . AC=2;AF=1.00;AN=2;DP=328;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.51;SOR=0.975 GT:AD:DP:GQ:PL 1/1:0,327:327:99:9677,977,0 +NC_002945.4 970113 . N . . . . GT ./. +NC_002945.4 970114 . N . . . . GT ./. +NC_002945.4 970115 . N . . . . GT ./. +NC_002945.4 970116 . N . . . . GT ./. +NC_002945.4 970117 . N . . . . GT ./. +NC_002945.4 970118 . N . . . . GT ./. +NC_002945.4 970119 . N . . . . GT ./. +NC_002945.4 970120 . N . . . . GT ./. +NC_002945.4 970121 . N . . . . GT ./. +NC_002945.4 970122 . N . . . . GT ./. +NC_002945.4 970123 . N . . . . GT ./. +NC_002945.4 970124 . N . . . . GT ./. +NC_002945.4 970125 . N . . . . GT ./. +NC_002945.4 970126 . N . . . . GT ./. +NC_002945.4 970127 . N . . . . GT ./. +NC_002945.4 970128 . N . . . . GT ./. +NC_002945.4 970129 . N . . . . GT ./. +NC_002945.4 970130 . N . . . . GT ./. +NC_002945.4 970131 . N . . . . GT ./. +NC_002945.4 970132 . N . . . . GT ./. +NC_002945.4 970133 . N . . . . GT ./. +NC_002945.4 970134 . N . . . . GT ./. +NC_002945.4 970135 . N . . . . GT ./. +NC_002945.4 970136 . N . . . . GT ./. +NC_002945.4 970137 . N . . . . GT ./. +NC_002945.4 970138 . N . . . . GT ./. +NC_002945.4 970139 . N . . . . GT ./. +NC_002945.4 970140 . N . . . . GT ./. +NC_002945.4 970141 . N . . . . GT ./. +NC_002945.4 970142 . N . . . . GT ./. +NC_002945.4 970143 . N . . . . GT ./. +NC_002945.4 970144 . N . . . . GT ./. +NC_002945.4 970145 . N . . . . GT ./. +NC_002945.4 970146 . N . . . . GT ./. +NC_002945.4 970147 . N . . . . GT ./. +NC_002945.4 970148 . N . . . . GT ./. +NC_002945.4 970149 . N . . . . GT ./. +NC_002945.4 970150 . N . . . . GT ./. +NC_002945.4 970151 . N . . . . GT ./. +NC_002945.4 970152 . N . . . . GT ./. +NC_002945.4 970153 . N . . . . GT ./. +NC_002945.4 970154 . N . . . . GT ./. +NC_002945.4 970155 . N . . . . GT ./. +NC_002945.4 970156 . N . . . . GT ./. +NC_002945.4 970157 . N . . . . GT ./. +NC_002945.4 970158 . N . . . . GT ./. +NC_002945.4 970159 . N . . . . GT ./. +NC_002945.4 970160 . N . . . . GT ./. +NC_002945.4 970161 . N . . . . GT ./. +NC_002945.4 970162 . N . . . . GT ./. +NC_002945.4 970163 . N . . . . GT ./. +NC_002945.4 970164 . N . . . . GT ./. +NC_002945.4 970165 . N . . . . GT ./. +NC_002945.4 970166 . N . . . . GT ./. +NC_002945.4 970167 . N . . . . GT ./. +NC_002945.4 970168 . N . . . . GT ./. +NC_002945.4 970169 . N . . . . GT ./. +NC_002945.4 970170 . N . . . . GT ./. +NC_002945.4 970171 . N . . . . GT ./. +NC_002945.4 970172 . N . . . . GT ./. +NC_002945.4 970173 . N . . . . GT ./. +NC_002945.4 970174 . N . . . . GT ./. +NC_002945.4 970175 . N . . . . GT ./. +NC_002945.4 970176 . N . . . . GT ./. +NC_002945.4 970177 . N . . . . GT ./. +NC_002945.4 970178 . N . . . . GT ./. +NC_002945.4 970179 . N . . . . GT ./. +NC_002945.4 970180 . N . . . . GT ./. +NC_002945.4 970181 . N . . . . GT ./. +NC_002945.4 970182 . N . . . . GT ./. +NC_002945.4 970183 . N . . . . GT ./. +NC_002945.4 970184 . N . . . . GT ./. +NC_002945.4 970185 . N . . . . GT ./. +NC_002945.4 970186 . N . . . . GT ./. +NC_002945.4 970187 . N . . . . GT ./. +NC_002945.4 970188 . N . . . . GT ./. +NC_002945.4 976327 . C T 6121.77 . AC=2;AF=1.00;AN=2;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.22;SOR=2.621 GT:AD:DP:GQ:PL 1/1:0,190:190:99:6150,563,0 +NC_002945.4 982007 . G C 7198.77 . AC=2;AF=1.00;AN=2;DP=246;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,245:245:99:7227,728,0 +NC_002945.4 998183 . C G 10840.77 . AC=2;AF=1.00;AN=2;DP=378;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.68;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,378:378:99:10869,1123,0 +NC_002945.4 1053067 . T G 9896.77 . AC=2;AF=1.00;AN=2;DP=342;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.19;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,339:339:99:9925,1004,0 +NC_002945.4 1087368 . G A 6513.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.656;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=2.952;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.96;ReadPosRankSum=0.578;SOR=0.168 GT:AD:DP:GQ:PL 1/1:2,231:233:99:6542,672,0 +NC_002945.4 1092430 . N . . . . GT ./. +NC_002945.4 1092431 . N . . . . GT ./. +NC_002945.4 1096802 . T G 6064.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.184;ClippingRankSum=0.000;DP=182;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.78;MQRankSum=0.042;QD=34.66;ReadPosRankSum=2.149;SOR=2.584 GT:AD:DP:GQ:PL 1/1:1,174:175:99:6093,485,0 +NC_002945.4 1104019 . T C 10941.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.834;ClippingRankSum=0.000;DP=390;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.20;ReadPosRankSum=1.431;SOR=0.972 GT:AD:DP:GQ:PL 1/1:2,386:388:99:10970,1130,0 +NC_002945.4 1124266 . G A 9536.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.005;ClippingRankSum=0.000;DP=335;ExcessHet=3.0103;FS=3.102;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.47;ReadPosRankSum=1.484;SOR=0.300 GT:AD:DP:GQ:PL 1/1:1,334:335:99:9565,987,0 +NC_002945.4 1137800 . G C 7224.77 . AC=2;AF=1.00;AN=2;DP=226;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.11;SOR=0.834 GT:AD:DP:GQ:PL 1/1:0,225:225:99:7253,673,0 +NC_002945.4 1139489 . T C 6218.77 . AC=2;AF=1.00;AN=2;DP=211;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.47;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,211:211:99:6247,630,0 +NC_002945.4 1141124 . C T 4889.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.811;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.78;ReadPosRankSum=-0.454;SOR=0.325 GT:AD:DP:GQ:PL 1/1:1,175:176:99:4918,508,0 +NC_002945.4 1168458 . G T 6765.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.643;ClippingRankSum=0.000;DP=245;ExcessHet=3.0103;FS=3.016;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.62;ReadPosRankSum=1.997;SOR=0.125 GT:AD:DP:GQ:PL 1/1:2,243:245:99:6794,704,0 +NC_002945.4 1206896 . A G 7606.77 . AC=2;AF=1.00;AN=2;DP=225;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.11;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,223:223:99:7635,664,0 +NC_002945.4 1214540 . T C 1448.77 . AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.64;QD=32.93;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1477,130,0 +NC_002945.4 1214767 . C T 72.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.901;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=41.217;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=1.46;ReadPosRankSum=-6.174;SOR=2.203 GT:AD:DP:GQ:PL 0/1:36,14:50:99:101,0,712 +NC_002945.4 1218462 . N . . . . GT ./. +NC_002945.4 1218463 . N . . . . GT ./. +NC_002945.4 1218464 . N . . . . GT ./. +NC_002945.4 1218966 . N . . . . GT ./. +NC_002945.4 1218967 . N . . . . GT ./. +NC_002945.4 1218968 . N . . . . GT ./. +NC_002945.4 1218969 . N . . . . GT ./. +NC_002945.4 1218970 . N . . . . GT ./. +NC_002945.4 1218971 . N . . . . GT ./. +NC_002945.4 1218972 . N . . . . GT ./. +NC_002945.4 1218973 . N . . . . GT ./. +NC_002945.4 1218974 . N . . . . GT ./. +NC_002945.4 1218975 . N . . . . GT ./. +NC_002945.4 1218976 . N . . . . GT ./. +NC_002945.4 1218977 . N . . . . GT ./. +NC_002945.4 1218978 . N . . . . GT ./. +NC_002945.4 1218979 . N . . . . GT ./. +NC_002945.4 1218980 . N . . . . GT ./. +NC_002945.4 1218981 . N . . . . GT ./. +NC_002945.4 1218982 . N . . . . GT ./. +NC_002945.4 1218983 . N . . . . GT ./. +NC_002945.4 1218984 . N . . . . GT ./. +NC_002945.4 1218985 . N . . . . GT ./. +NC_002945.4 1218986 . N . . . . GT ./. +NC_002945.4 1218987 . N . . . . GT ./. +NC_002945.4 1218988 . N . . . . GT ./. +NC_002945.4 1218989 . N . . . . GT ./. +NC_002945.4 1218990 . N . . . . GT ./. +NC_002945.4 1218991 . N . . . . GT ./. +NC_002945.4 1218992 . N . . . . GT ./. +NC_002945.4 1218993 . N . . . . GT ./. +NC_002945.4 1218994 . N . . . . GT ./. +NC_002945.4 1218995 . N . . . . GT ./. +NC_002945.4 1218996 . N . . . . GT ./. +NC_002945.4 1218997 . N . . . . GT ./. +NC_002945.4 1218998 . N . . . . GT ./. +NC_002945.4 1218999 . N . . . . GT ./. +NC_002945.4 1219000 . N . . . . GT ./. +NC_002945.4 1219001 . N . . . . GT ./. +NC_002945.4 1219002 . N . . . . GT ./. +NC_002945.4 1219003 . N . . . . GT ./. +NC_002945.4 1219004 . N . . . . GT ./. +NC_002945.4 1219005 . N . . . . GT ./. +NC_002945.4 1219006 . N . . . . GT ./. +NC_002945.4 1219007 . N . . . . GT ./. +NC_002945.4 1219008 . N . . . . GT ./. +NC_002945.4 1219009 . N . . . . GT ./. +NC_002945.4 1219010 . N . . . . GT ./. +NC_002945.4 1219011 . N . . . . GT ./. +NC_002945.4 1219012 . N . . . . GT ./. +NC_002945.4 1219013 . N . . . . GT ./. +NC_002945.4 1219014 . N . . . . GT ./. +NC_002945.4 1219015 . N . . . . GT ./. +NC_002945.4 1219016 . N . . . . GT ./. +NC_002945.4 1219017 . N . . . . GT ./. +NC_002945.4 1219018 . N . . . . GT ./. +NC_002945.4 1219019 . N . . . . GT ./. +NC_002945.4 1219020 . N . . . . GT ./. +NC_002945.4 1219021 . N . . . . GT ./. +NC_002945.4 1219022 . N . . . . GT ./. +NC_002945.4 1219023 . N . . . . GT ./. +NC_002945.4 1219024 . N . . . . GT ./. +NC_002945.4 1219025 . N . . . . GT ./. +NC_002945.4 1219026 . N . . . . GT ./. +NC_002945.4 1219027 . N . . . . GT ./. +NC_002945.4 1219028 . N . . . . GT ./. +NC_002945.4 1219029 . N . . . . GT ./. +NC_002945.4 1219030 . N . . . . GT ./. +NC_002945.4 1219031 . N . . . . GT ./. +NC_002945.4 1219032 . N . . . . GT ./. +NC_002945.4 1219033 . N . . . . GT ./. +NC_002945.4 1219034 . N . . . . GT ./. +NC_002945.4 1219035 . N . . . . GT ./. +NC_002945.4 1219036 . N . . . . GT ./. +NC_002945.4 1219037 . N . . . . GT ./. +NC_002945.4 1219038 . N . . . . GT ./. +NC_002945.4 1219039 . N . . . . GT ./. +NC_002945.4 1219040 . N . . . . GT ./. +NC_002945.4 1219041 . N . . . . GT ./. +NC_002945.4 1219042 . N . . . . GT ./. +NC_002945.4 1219043 . N . . . . GT ./. +NC_002945.4 1219044 . N . . . . GT ./. +NC_002945.4 1219045 . N . . . . GT ./. +NC_002945.4 1219046 . N . . . . GT ./. +NC_002945.4 1219387 . G A 43.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.655;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=7.782;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.86;ReadPosRankSum=-2.655;SOR=0.027 GT:AD:DP:GQ:PL 0/1:5,4:9:72:72,0,182 +NC_002945.4 1230875 . G T 6698.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.419;ClippingRankSum=0.000;DP=238;ExcessHet=3.0103;FS=7.955;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.51;ReadPosRankSum=5.525;SOR=1.840 GT:AD:DP:GQ:PL 1/1:5,222:227:99:6727,530,0 +NC_002945.4 1285158 . C T 6685.77 . AC=2;AF=1.00;AN=2;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.24;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,214:214:99:6714,639,0 +NC_002945.4 1295549 . C T 11485.77 . AC=2;AF=1.00;AN=2;DP=411;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.15;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,408:408:99:11514,1216,0 +NC_002945.4 1329774 . C T 7694.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.889;ClippingRankSum=0.000;DP=271;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.39;ReadPosRankSum=1.370;SOR=0.261 GT:AD:DP:GQ:PL 1/1:1,270:271:99:7723,794,0 +NC_002945.4 1343752 . A G 1334.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.657;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=15.563;MLEAC=2;MLEAF=1.00;MQ=39.61;MQRankSum=6.085;QD=33.38;ReadPosRankSum=-0.418;SOR=7.167 GT:AD:DP:GQ:PL 1/1:1,35:36:98:1363,98,0 +NC_002945.4 1367962 . C G 7373.77 . AC=2;AF=1.00;AN=2;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.48;SOR=2.701 GT:AD:DP:GQ:PL 1/1:0,206:206:99:7402,616,0 +NC_002945.4 1417775 . N . . . . GT ./. +NC_002945.4 1417776 . N . . . . GT ./. +NC_002945.4 1417777 . N . . . . GT ./. +NC_002945.4 1417778 . N . . . . GT ./. +NC_002945.4 1417779 . N . . . . GT ./. +NC_002945.4 1417780 . N . . . . GT ./. +NC_002945.4 1417781 . N . . . . GT ./. +NC_002945.4 1417782 . N . . . . GT ./. +NC_002945.4 1417783 . N . . . . GT ./. +NC_002945.4 1417784 . N . . . . GT ./. +NC_002945.4 1417785 . N . . . . GT ./. +NC_002945.4 1417786 . N . . . . GT ./. +NC_002945.4 1417787 . N . . . . GT ./. +NC_002945.4 1417788 . N . . . . GT ./. +NC_002945.4 1417789 . N . . . . GT ./. +NC_002945.4 1417790 . N . . . . GT ./. +NC_002945.4 1417791 . N . . . . GT ./. +NC_002945.4 1417792 . N . . . . GT ./. +NC_002945.4 1417793 . N . . . . GT ./. +NC_002945.4 1417794 . N . . . . GT ./. +NC_002945.4 1417795 . N . . . . GT ./. +NC_002945.4 1417796 . N . . . . GT ./. +NC_002945.4 1417797 . N . . . . GT ./. +NC_002945.4 1417798 . N . . . . GT ./. +NC_002945.4 1417799 . N . . . . GT ./. +NC_002945.4 1417800 . N . . . . GT ./. +NC_002945.4 1417801 . N . . . . GT ./. +NC_002945.4 1417802 . N . . . . GT ./. +NC_002945.4 1417803 . N . . . . GT ./. +NC_002945.4 1417804 . N . . . . GT ./. +NC_002945.4 1417805 . N . . . . GT ./. +NC_002945.4 1421330 . G A 4105.77 . AC=2;AF=1.00;AN=2;DP=168;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.66;SOR=1.565 GT:AD:DP:GQ:PL 1/1:0,160:160:99:4134,456,0 +NC_002945.4 1421904 . T C 9463.77 . AC=2;AF=1.00;AN=2;DP=302;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.34;SOR=0.819 GT:AD:DP:GQ:PL 1/1:0,302:302:99:9492,902,0 +NC_002945.4 1442194 . T G 8885.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.879;ClippingRankSum=0.000;DP=279;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.85;ReadPosRankSum=-0.953;SOR=0.310 GT:AD:DP:GQ:PL 1/1:1,278:279:99:8914,824,0 +NC_002945.4 1491894 . N . . . . GT ./. +NC_002945.4 1491895 . N . . . . GT ./. +NC_002945.4 1491896 . N . . . . GT ./. +NC_002945.4 1491897 . N . . . . GT ./. +NC_002945.4 1491898 . N . . . . GT ./. +NC_002945.4 1491899 . N . . . . GT ./. +NC_002945.4 1491900 . N . . . . GT ./. +NC_002945.4 1491901 . N . . . . GT ./. +NC_002945.4 1491902 . N . . . . GT ./. +NC_002945.4 1491903 . N . . . . GT ./. +NC_002945.4 1491904 . N . . . . GT ./. +NC_002945.4 1491905 . N . . . . GT ./. +NC_002945.4 1491906 . N . . . . GT ./. +NC_002945.4 1491907 . N . . . . GT ./. +NC_002945.4 1491908 . N . . . . GT ./. +NC_002945.4 1491909 . N . . . . GT ./. +NC_002945.4 1491910 . N . . . . GT ./. +NC_002945.4 1491911 . N . . . . GT ./. +NC_002945.4 1491912 . N . . . . GT ./. +NC_002945.4 1491913 . N . . . . GT ./. +NC_002945.4 1491914 . N . . . . GT ./. +NC_002945.4 1498117 . G A 8837.77 . AC=2;AF=1.00;AN=2;DP=308;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.69;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,308:308:99:8866,916,0 +NC_002945.4 1509487 . A G 8127.77 . AC=2;AF=1.00;AN=2;DP=263;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.14;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,261:261:99:8156,781,0 +NC_002945.4 1529147 . T G 9064.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.010;ClippingRankSum=0.000;DP=318;ExcessHet=3.0103;FS=3.065;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.51;ReadPosRankSum=1.715;SOR=0.274 GT:AD:DP:GQ:PL 1/1:1,317:318:99:9093,936,0 +NC_002945.4 1533175 . A G 11277.77 . AC=2;AF=1.00;AN=2;DP=393;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.70;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,393:393:99:11306,1171,0 +NC_002945.4 1535271 . A T 6912.77 . AC=2;AF=1.00;AN=2;DP=239;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.76;QD=29.05;SOR=1.252 GT:AD:DP:GQ:PL 1/1:0,238:238:99:6941,710,0 +NC_002945.4 1573990 . N . . . . GT ./. +NC_002945.4 1573991 . N . . . . GT ./. +NC_002945.4 1573992 . N . . . . GT ./. +NC_002945.4 1573993 . N . . . . GT ./. +NC_002945.4 1573994 . N . . . . GT ./. +NC_002945.4 1573995 . N . . . . GT ./. +NC_002945.4 1573996 . N . . . . GT ./. +NC_002945.4 1573997 . N . . . . GT ./. +NC_002945.4 1573998 . N . . . . GT ./. +NC_002945.4 1573999 . N . . . . GT ./. +NC_002945.4 1574000 . N . . . . GT ./. +NC_002945.4 1574001 . N . . . . GT ./. +NC_002945.4 1574002 . N . . . . GT ./. +NC_002945.4 1574003 . N . . . . GT ./. +NC_002945.4 1574004 . N . . . . GT ./. +NC_002945.4 1574005 . N . . . . GT ./. +NC_002945.4 1574006 . N . . . . GT ./. +NC_002945.4 1574007 . N . . . . GT ./. +NC_002945.4 1574008 . N . . . . GT ./. +NC_002945.4 1574009 . N . . . . GT ./. +NC_002945.4 1574010 . N . . . . GT ./. +NC_002945.4 1574011 . N . . . . GT ./. +NC_002945.4 1574012 . N . . . . GT ./. +NC_002945.4 1574013 . N . . . . GT ./. +NC_002945.4 1574014 . N . . . . GT ./. +NC_002945.4 1574015 . N . . . . GT ./. +NC_002945.4 1574016 . N . . . . GT ./. +NC_002945.4 1574017 . N . . . . GT ./. +NC_002945.4 1582413 . G C 7693.77 . AC=2;AF=1.00;AN=2;DP=257;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.94;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,257:257:99:7722,762,0 +NC_002945.4 1601835 . G A 8195.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.869;ClippingRankSum=0.000;DP=316;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=26.27;ReadPosRankSum=-0.436;SOR=0.289 GT:AD:DP:GQ:PL 1/1:1,311:312:99:8224,868,0 +NC_002945.4 1610248 . C G 7736.77 . AC=2;AF=1.00;AN=2;DP=266;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.42;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,263:263:99:7765,784,0 +NC_002945.4 1619153 . A G 2239.77 . AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.00;SOR=1.503 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2268,188,0 +NC_002945.4 1632869 . G T 2587.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.762;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=4.102;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.75;ReadPosRankSum=1.959;SOR=1.033 GT:AD:DP:GQ:PL 1/1:1,89:90:99:2616,255,0 +NC_002945.4 1633321 . N . . . . GT ./. +NC_002945.4 1633322 . N . . . . GT ./. +NC_002945.4 1633323 . N . . . . GT ./. +NC_002945.4 1633324 . N . . . . GT ./. +NC_002945.4 1633325 . N . . . . GT ./. +NC_002945.4 1633326 . N . . . . GT ./. +NC_002945.4 1633327 . N . . . . GT ./. +NC_002945.4 1633328 . N . . . . GT ./. +NC_002945.4 1633329 . N . . . . GT ./. +NC_002945.4 1633330 . N . . . . GT ./. +NC_002945.4 1633331 . N . . . . GT ./. +NC_002945.4 1633332 . N . . . . GT ./. +NC_002945.4 1633333 . N . . . . GT ./. +NC_002945.4 1633334 . N . . . . GT ./. +NC_002945.4 1633335 . N . . . . GT ./. +NC_002945.4 1633336 . N . . . . GT ./. +NC_002945.4 1633337 . N . . . . GT ./. +NC_002945.4 1633338 . N . . . . GT ./. +NC_002945.4 1633339 . N . . . . GT ./. +NC_002945.4 1633340 . N . . . . GT ./. +NC_002945.4 1633341 . N . . . . GT ./. +NC_002945.4 1633342 . N . . . . GT ./. +NC_002945.4 1633343 . N . . . . GT ./. +NC_002945.4 1633344 . N . . . . GT ./. +NC_002945.4 1633345 . N . . . . GT ./. +NC_002945.4 1633346 . N . . . . GT ./. +NC_002945.4 1633347 . N . . . . GT ./. +NC_002945.4 1633348 . N . . . . GT ./. +NC_002945.4 1633349 . N . . . . GT ./. +NC_002945.4 1633350 . N . . . . GT ./. +NC_002945.4 1633351 . N . . . . GT ./. +NC_002945.4 1634471 . N . . . . GT ./. +NC_002945.4 1634472 . N . . . . GT ./. +NC_002945.4 1634473 . N . . . . GT ./. +NC_002945.4 1634474 . N . . . . GT ./. +NC_002945.4 1634475 . N . . . . GT ./. +NC_002945.4 1634476 . N . . . . GT ./. +NC_002945.4 1634477 . N . . . . GT ./. +NC_002945.4 1634478 . N . . . . GT ./. +NC_002945.4 1634479 . N . . . . GT ./. +NC_002945.4 1634480 . N . . . . GT ./. +NC_002945.4 1634481 . N . . . . GT ./. +NC_002945.4 1634482 . N . . . . GT ./. +NC_002945.4 1634483 . N . . . . GT ./. +NC_002945.4 1634484 . N . . . . GT ./. +NC_002945.4 1634485 . N . . . . GT ./. +NC_002945.4 1634486 . N . . . . GT ./. +NC_002945.4 1634487 . N . . . . GT ./. +NC_002945.4 1634488 . N . . . . GT ./. +NC_002945.4 1634489 . N . . . . GT ./. +NC_002945.4 1634490 . N . . . . GT ./. +NC_002945.4 1634491 . N . . . . GT ./. +NC_002945.4 1634492 . N . . . . GT ./. +NC_002945.4 1634493 . N . . . . GT ./. +NC_002945.4 1634494 . N . . . . GT ./. +NC_002945.4 1634495 . N . . . . GT ./. +NC_002945.4 1634496 . N . . . . GT ./. +NC_002945.4 1634497 . N . . . . GT ./. +NC_002945.4 1634498 . N . . . . GT ./. +NC_002945.4 1634499 . N . . . . GT ./. +NC_002945.4 1634500 . N . . . . GT ./. +NC_002945.4 1634501 . N . . . . GT ./. +NC_002945.4 1634502 . N . . . . GT ./. +NC_002945.4 1634503 . N . . . . GT ./. +NC_002945.4 1634504 . N . . . . GT ./. +NC_002945.4 1634505 . N . . . . GT ./. +NC_002945.4 1634506 . N . . . . GT ./. +NC_002945.4 1634507 . N . . . . GT ./. +NC_002945.4 1634508 . N . . . . GT ./. +NC_002945.4 1634509 . N . . . . GT ./. +NC_002945.4 1634510 . N . . . . GT ./. +NC_002945.4 1634511 . N . . . . GT ./. +NC_002945.4 1634512 . N . . . . GT ./. +NC_002945.4 1634513 . N . . . . GT ./. +NC_002945.4 1634514 . N . . . . GT ./. +NC_002945.4 1634515 . N . . . . GT ./. +NC_002945.4 1634516 . N . . . . GT ./. +NC_002945.4 1634517 . N . . . . GT ./. +NC_002945.4 1634518 . N . . . . GT ./. +NC_002945.4 1634519 . N . . . . GT ./. +NC_002945.4 1634520 . N . . . . GT ./. +NC_002945.4 1634521 . N . . . . GT ./. +NC_002945.4 1634522 . N . . . . GT ./. +NC_002945.4 1634523 . N . . . . GT ./. +NC_002945.4 1634524 . N . . . . GT ./. +NC_002945.4 1634525 . N . . . . GT ./. +NC_002945.4 1634526 . N . . . . GT ./. +NC_002945.4 1634527 . N . . . . GT ./. +NC_002945.4 1634528 . N . . . . GT ./. +NC_002945.4 1634529 . N . . . . GT ./. +NC_002945.4 1634530 . N . . . . GT ./. +NC_002945.4 1634531 . N . . . . GT ./. +NC_002945.4 1634532 . N . . . . GT ./. +NC_002945.4 1634533 . N . . . . GT ./. +NC_002945.4 1634534 . N . . . . GT ./. +NC_002945.4 1634535 . N . . . . GT ./. +NC_002945.4 1634536 . N . . . . GT ./. +NC_002945.4 1634537 . N . . . . GT ./. +NC_002945.4 1634538 . N . . . . GT ./. +NC_002945.4 1634539 . N . . . . GT ./. +NC_002945.4 1634540 . N . . . . GT ./. +NC_002945.4 1634541 . N . . . . GT ./. +NC_002945.4 1634542 . N . . . . GT ./. +NC_002945.4 1634543 . N . . . . GT ./. +NC_002945.4 1634544 . N . . . . GT ./. +NC_002945.4 1634545 . N . . . . GT ./. +NC_002945.4 1634546 . N . . . . GT ./. +NC_002945.4 1634547 . N . . . . GT ./. +NC_002945.4 1634548 . N . . . . GT ./. +NC_002945.4 1634549 . N . . . . GT ./. +NC_002945.4 1634550 . N . . . . GT ./. +NC_002945.4 1634551 . N . . . . GT ./. +NC_002945.4 1634552 . N . . . . GT ./. +NC_002945.4 1634553 . N . . . . GT ./. +NC_002945.4 1634554 . N . . . . GT ./. +NC_002945.4 1634555 . N . . . . GT ./. +NC_002945.4 1634556 . N . . . . GT ./. +NC_002945.4 1634557 . N . . . . GT ./. +NC_002945.4 1634558 . N . . . . GT ./. +NC_002945.4 1634559 . N . . . . GT ./. +NC_002945.4 1634560 . N . . . . GT ./. +NC_002945.4 1634903 . N . . . . GT ./. +NC_002945.4 1634904 . N . . . . GT ./. +NC_002945.4 1634905 . N . . . . GT ./. +NC_002945.4 1634906 . N . . . . GT ./. +NC_002945.4 1634907 . N . . . . GT ./. +NC_002945.4 1634908 . N . . . . GT ./. +NC_002945.4 1634909 . N . . . . GT ./. +NC_002945.4 1634910 . N . . . . GT ./. +NC_002945.4 1634911 . N . . . . GT ./. +NC_002945.4 1634912 . N . . . . GT ./. +NC_002945.4 1634913 . N . . . . GT ./. +NC_002945.4 1634914 . N . . . . GT ./. +NC_002945.4 1634915 . N . . . . GT ./. +NC_002945.4 1634916 . N . . . . GT ./. +NC_002945.4 1634917 . N . . . . GT ./. +NC_002945.4 1634918 . N . . . . GT ./. +NC_002945.4 1634919 . N . . . . GT ./. +NC_002945.4 1634920 . N . . . . GT ./. +NC_002945.4 1634921 . N . . . . GT ./. +NC_002945.4 1634922 . N . . . . GT ./. +NC_002945.4 1634923 . N . . . . GT ./. +NC_002945.4 1634924 . N . . . . GT ./. +NC_002945.4 1634925 . N . . . . GT ./. +NC_002945.4 1634926 . N . . . . GT ./. +NC_002945.4 1634927 . N . . . . GT ./. +NC_002945.4 1634928 . N . . . . GT ./. +NC_002945.4 1634929 . N . . . . GT ./. +NC_002945.4 1634930 . N . . . . GT ./. +NC_002945.4 1634965 . N . . . . GT ./. +NC_002945.4 1634966 . N . . . . GT ./. +NC_002945.4 1634967 . N . . . . GT ./. +NC_002945.4 1634968 . N . . . . GT ./. +NC_002945.4 1634969 . N . . . . GT ./. +NC_002945.4 1634970 . N . . . . GT ./. +NC_002945.4 1634971 . N . . . . GT ./. +NC_002945.4 1634972 . N . . . . GT ./. +NC_002945.4 1634973 . N . . . . GT ./. +NC_002945.4 1634974 . N . . . . GT ./. +NC_002945.4 1634975 . N . . . . GT ./. +NC_002945.4 1634976 . N . . . . GT ./. +NC_002945.4 1634977 . N . . . . GT ./. +NC_002945.4 1634978 . N . . . . GT ./. +NC_002945.4 1634979 . N . . . . GT ./. +NC_002945.4 1634980 . N . . . . GT ./. +NC_002945.4 1634981 . N . . . . GT ./. +NC_002945.4 1634982 . N . . . . GT ./. +NC_002945.4 1634983 . N . . . . GT ./. +NC_002945.4 1634984 . N . . . . GT ./. +NC_002945.4 1634985 . N . . . . GT ./. +NC_002945.4 1634986 . N . . . . GT ./. +NC_002945.4 1634987 . N . . . . GT ./. +NC_002945.4 1634988 . N . . . . GT ./. +NC_002945.4 1634989 . N . . . . GT ./. +NC_002945.4 1634990 . N . . . . GT ./. +NC_002945.4 1634991 . N . . . . GT ./. +NC_002945.4 1634992 . N . . . . GT ./. +NC_002945.4 1634993 . N . . . . GT ./. +NC_002945.4 1634994 . N . . . . GT ./. +NC_002945.4 1634995 . N . . . . GT ./. +NC_002945.4 1634996 . N . . . . GT ./. +NC_002945.4 1634997 . N . . . . GT ./. +NC_002945.4 1634998 . N . . . . GT ./. +NC_002945.4 1634999 . N . . . . GT ./. +NC_002945.4 1635000 . N . . . . GT ./. +NC_002945.4 1635001 . N . . . . GT ./. +NC_002945.4 1635002 . N . . . . GT ./. +NC_002945.4 1635003 . N . . . . GT ./. +NC_002945.4 1635004 . N . . . . GT ./. +NC_002945.4 1635005 . N . . . . GT ./. +NC_002945.4 1635006 . N . . . . GT ./. +NC_002945.4 1635007 . N . . . . GT ./. +NC_002945.4 1635008 . N . . . . GT ./. +NC_002945.4 1635009 . N . . . . GT ./. +NC_002945.4 1635010 . N . . . . GT ./. +NC_002945.4 1635011 . N . . . . GT ./. +NC_002945.4 1635012 . N . . . . GT ./. +NC_002945.4 1635013 . N . . . . GT ./. +NC_002945.4 1635014 . N . . . . GT ./. +NC_002945.4 1635015 . N . . . . GT ./. +NC_002945.4 1635016 . N . . . . GT ./. +NC_002945.4 1635017 . N . . . . GT ./. +NC_002945.4 1635018 . N . . . . GT ./. +NC_002945.4 1635019 . N . . . . GT ./. +NC_002945.4 1635020 . N . . . . GT ./. +NC_002945.4 1635021 . N . . . . GT ./. +NC_002945.4 1635022 . N . . . . GT ./. +NC_002945.4 1635023 . N . . . . GT ./. +NC_002945.4 1635024 . N . . . . GT ./. +NC_002945.4 1635025 . N . . . . GT ./. +NC_002945.4 1635026 . N . . . . GT ./. +NC_002945.4 1635027 . N . . . . GT ./. +NC_002945.4 1635028 . N . . . . GT ./. +NC_002945.4 1635029 . N . . . . GT ./. +NC_002945.4 1635030 . N . . . . GT ./. +NC_002945.4 1635031 . N . . . . GT ./. +NC_002945.4 1635032 . N . . . . GT ./. +NC_002945.4 1635033 . N . . . . GT ./. +NC_002945.4 1635034 . N . . . . GT ./. +NC_002945.4 1635035 . N . . . . GT ./. +NC_002945.4 1635036 . N . . . . GT ./. +NC_002945.4 1635037 . N . . . . GT ./. +NC_002945.4 1635038 . N . . . . GT ./. +NC_002945.4 1635039 . N . . . . GT ./. +NC_002945.4 1635040 . N . . . . GT ./. +NC_002945.4 1635041 . N . . . . GT ./. +NC_002945.4 1635042 . N . . . . GT ./. +NC_002945.4 1635043 . N . . . . GT ./. +NC_002945.4 1635044 . N . . . . GT ./. +NC_002945.4 1635045 . N . . . . GT ./. +NC_002945.4 1635046 . N . . . . GT ./. +NC_002945.4 1635047 . N . . . . GT ./. +NC_002945.4 1635048 . N . . . . GT ./. +NC_002945.4 1635049 . N . . . . GT ./. +NC_002945.4 1635050 . N . . . . GT ./. +NC_002945.4 1635051 . N . . . . GT ./. +NC_002945.4 1635052 . N . . . . GT ./. +NC_002945.4 1635053 . N . . . . GT ./. +NC_002945.4 1635054 . N . . . . GT ./. +NC_002945.4 1635055 . N . . . . GT ./. +NC_002945.4 1635056 . N . . . . GT ./. +NC_002945.4 1635057 . N . . . . GT ./. +NC_002945.4 1635058 . N . . . . GT ./. +NC_002945.4 1635059 . N . . . . GT ./. +NC_002945.4 1635060 . N . . . . GT ./. +NC_002945.4 1635061 . N . . . . GT ./. +NC_002945.4 1635062 . N . . . . GT ./. +NC_002945.4 1635063 . N . . . . GT ./. +NC_002945.4 1635064 . N . . . . GT ./. +NC_002945.4 1635065 . N . . . . GT ./. +NC_002945.4 1635066 . N . . . . GT ./. +NC_002945.4 1635067 . N . . . . GT ./. +NC_002945.4 1635068 . N . . . . GT ./. +NC_002945.4 1635069 . N . . . . GT ./. +NC_002945.4 1635070 . N . . . . GT ./. +NC_002945.4 1635071 . N . . . . GT ./. +NC_002945.4 1635072 . N . . . . GT ./. +NC_002945.4 1635073 . N . . . . GT ./. +NC_002945.4 1635074 . N . . . . GT ./. +NC_002945.4 1635075 . N . . . . GT ./. +NC_002945.4 1635076 . N . . . . GT ./. +NC_002945.4 1635077 . N . . . . GT ./. +NC_002945.4 1635078 . N . . . . GT ./. +NC_002945.4 1635079 . N . . . . GT ./. +NC_002945.4 1635080 . N . . . . GT ./. +NC_002945.4 1635081 . N . . . . GT ./. +NC_002945.4 1635082 . N . . . . GT ./. +NC_002945.4 1635083 . N . . . . GT ./. +NC_002945.4 1635084 . N . . . . GT ./. +NC_002945.4 1635085 . N . . . . GT ./. +NC_002945.4 1635086 . N . . . . GT ./. +NC_002945.4 1635087 . N . . . . GT ./. +NC_002945.4 1635088 . N . . . . GT ./. +NC_002945.4 1635089 . N . . . . GT ./. +NC_002945.4 1635090 . N . . . . GT ./. +NC_002945.4 1635091 . N . . . . GT ./. +NC_002945.4 1635092 . N . . . . GT ./. +NC_002945.4 1635093 . N . . . . GT ./. +NC_002945.4 1635094 . N . . . . GT ./. +NC_002945.4 1635095 . N . . . . GT ./. +NC_002945.4 1635096 . N . . . . GT ./. +NC_002945.4 1635097 . N . . . . GT ./. +NC_002945.4 1635098 . N . . . . GT ./. +NC_002945.4 1635099 . N . . . . GT ./. +NC_002945.4 1635100 . N . . . . GT ./. +NC_002945.4 1638251 . N . . . . GT ./. +NC_002945.4 1638252 . N . . . . GT ./. +NC_002945.4 1638253 . N . . . . GT ./. +NC_002945.4 1638254 . N . . . . GT ./. +NC_002945.4 1638255 . N . . . . GT ./. +NC_002945.4 1638256 . N . . . . GT ./. +NC_002945.4 1638257 . N . . . . GT ./. +NC_002945.4 1638258 . N . . . . GT ./. +NC_002945.4 1638259 . N . . . . GT ./. +NC_002945.4 1638260 . N . . . . GT ./. +NC_002945.4 1638261 . N . . . . GT ./. +NC_002945.4 1638262 . N . . . . GT ./. +NC_002945.4 1638263 . N . . . . GT ./. +NC_002945.4 1638264 . N . . . . GT ./. +NC_002945.4 1638265 . N . . . . GT ./. +NC_002945.4 1638266 . N . . . . GT ./. +NC_002945.4 1638267 . N . . . . GT ./. +NC_002945.4 1638268 . N . . . . GT ./. +NC_002945.4 1638269 . N . . . . GT ./. +NC_002945.4 1638270 . N . . . . GT ./. +NC_002945.4 1638271 . N . . . . GT ./. +NC_002945.4 1638272 . N . . . . GT ./. +NC_002945.4 1638273 . N . . . . GT ./. +NC_002945.4 1638274 . N . . . . GT ./. +NC_002945.4 1638275 . N . . . . GT ./. +NC_002945.4 1638276 . N . . . . GT ./. +NC_002945.4 1638277 . N . . . . GT ./. +NC_002945.4 1638278 . N . . . . GT ./. +NC_002945.4 1638279 . N . . . . GT ./. +NC_002945.4 1638280 . N . . . . GT ./. +NC_002945.4 1638281 . N . . . . GT ./. +NC_002945.4 1638282 . N . . . . GT ./. +NC_002945.4 1638283 . N . . . . GT ./. +NC_002945.4 1638284 . N . . . . GT ./. +NC_002945.4 1638285 . N . . . . GT ./. +NC_002945.4 1638286 . N . . . . GT ./. +NC_002945.4 1638287 . N . . . . GT ./. +NC_002945.4 1638848 . N . . . . GT ./. +NC_002945.4 1638849 . N . . . . GT ./. +NC_002945.4 1638850 . N . . . . GT ./. +NC_002945.4 1638851 . N . . . . GT ./. +NC_002945.4 1638852 . N . . . . GT ./. +NC_002945.4 1638853 . N . . . . GT ./. +NC_002945.4 1638854 . N . . . . GT ./. +NC_002945.4 1638855 . N . . . . GT ./. +NC_002945.4 1638856 . N . . . . GT ./. +NC_002945.4 1638857 . N . . . . GT ./. +NC_002945.4 1638858 . N . . . . GT ./. +NC_002945.4 1638859 . N . . . . GT ./. +NC_002945.4 1638860 . N . . . . GT ./. +NC_002945.4 1638861 . N . . . . GT ./. +NC_002945.4 1638862 . N . . . . GT ./. +NC_002945.4 1638863 . N . . . . GT ./. +NC_002945.4 1638864 . N . . . . GT ./. +NC_002945.4 1638865 . N . . . . GT ./. +NC_002945.4 1638866 . N . . . . GT ./. +NC_002945.4 1638867 . N . . . . GT ./. +NC_002945.4 1638868 . N . . . . GT ./. +NC_002945.4 1638869 . N . . . . GT ./. +NC_002945.4 1638870 . N . . . . GT ./. +NC_002945.4 1638871 . N . . . . GT ./. +NC_002945.4 1638872 . N . . . . GT ./. +NC_002945.4 1638873 . N . . . . GT ./. +NC_002945.4 1653866 . C A 6879.77 . AC=2;AF=1.00;AN=2;DP=228;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.44;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,226:226:99:6908,673,0 +NC_002945.4 1665501 . G A 6621.77 . AC=2;AF=1.00;AN=2;DP=255;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.07;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,254:254:99:6650,745,0 +NC_002945.4 1677471 . C G 7578.77 . AC=2;AF=1.00;AN=2;DP=241;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.58;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,240:240:99:7607,719,0 +NC_002945.4 1690441 . G A 6232.77 . AC=2;AF=1.00;AN=2;DP=221;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.59;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,218:218:99:6261,643,0 +NC_002945.4 1705279 . C G 8183.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.797;ClippingRankSum=0.000;DP=258;ExcessHet=3.0103;FS=3.044;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.72;ReadPosRankSum=2.478;SOR=0.260 GT:AD:DP:GQ:PL 1/1:1,257:258:99:8212,761,0 +NC_002945.4 1716181 . T G 8964.77 . AC=2;AF=1.00;AN=2;DP=297;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.29;SOR=0.915 GT:AD:DP:GQ:PL 1/1:0,296:296:99:8993,882,0 +NC_002945.4 1717086 . T C 8208.77 . AC=2;AF=1.00;AN=2;DP=275;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,274:274:99:8237,813,0 +NC_002945.4 1721077 . A G 8899.77 . AC=2;AF=1.00;AN=2;DP=294;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.27;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,294:294:99:8928,878,0 +NC_002945.4 1726384 . C G 10800.77 . AC=2;AF=1.00;AN=2;DP=362;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.92;SOR=0.879 GT:AD:DP:GQ:PL 1/1:0,361:361:99:10829,1074,0 +NC_002945.4 1750007 . C G 9816.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.995;ClippingRankSum=0.000;DP=325;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.21;ReadPosRankSum=-0.348;SOR=0.260 GT:AD:DP:GQ:PL 1/1:1,324:325:99:9845,961,0 +NC_002945.4 1776339 . G A 7668.77 . AC=2;AF=1.00;AN=2;DP=266;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.94;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,265:265:99:7697,789,0 +NC_002945.4 1803035 . C T 8042.77 . AC=2;AF=1.00;AN=2;DP=280;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.72;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,280:280:99:8071,835,0 +NC_002945.4 1833330 . A G 8001.77 . AC=2;AF=1.00;AN=2;DP=260;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.78;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,260:260:99:8030,776,0 +NC_002945.4 1865339 . T G 106.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-3.576;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=140.956;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=1.37;ReadPosRankSum=-4.814;SOR=6.664 GT:AD:DP:GQ:PL 0/1:51,27:78:99:135,0,1193 +NC_002945.4 1869365 . G C 37.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.72;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,2:8:66:66,0,366 +NC_002945.4 1871246 . C A 6579.77 . AC=2;AF=1.00;AN=2;DP=208;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.90;SOR=1.321 GT:AD:DP:GQ:PL 1/1:0,200:200:99:6608,598,0 +NC_002945.4 1878223 . G A 7787.77 . AC=2;AF=1.00;AN=2;DP=272;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.63;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,272:272:99:7816,812,0 +NC_002945.4 1880869 . C T 9831.77 . AC=2;AF=1.00;AN=2;DP=348;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.25;SOR=0.935 GT:AD:DP:GQ:PL 1/1:0,348:348:99:9860,1038,0 +NC_002945.4 1915461 . G C 5888.77 . AC=2;AF=1.00;AN=2;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.27;SOR=1.988 GT:AD:DP:GQ:PL 1/1:0,177:177:99:5917,529,0 +NC_002945.4 1915936 . A G 8092.77 . AC=2;AF=1.00;AN=2;DP=269;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.08;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,269:269:99:8121,799,0 +NC_002945.4 1920100 . T C 9802.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.973;ClippingRankSum=0.000;DP=320;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.63;ReadPosRankSum=-0.502;SOR=0.380 GT:AD:DP:GQ:PL 1/1:1,319:320:99:9831,946,0 +NC_002945.4 1932972 . A G 5515.77 . AC=2;AF=1.00;AN=2;DP=168;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.23;SOR=2.542 GT:AD:DP:GQ:PL 1/1:0,166:166:99:5544,495,0 +NC_002945.4 1957978 . T G 6398.77 . AC=2;AF=1.00;AN=2;DP=221;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.95;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,221:221:99:6427,660,0 +NC_002945.4 1958977 . A T 6372.77 . AC=2;AF=1.00;AN=2;DP=184;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.82;SOR=1.342 GT:AD:DP:GQ:PL 1/1:0,183:183:99:6401,545,0 +NC_002945.4 1961656 . G A 6461.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.923;ClippingRankSum=0.000;DP=223;ExcessHet=3.0103;FS=3.271;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.98;ReadPosRankSum=-0.541;SOR=0.428 GT:AD:DP:GQ:PL 1/1:1,222:223:99:6490,653,0 +NC_002945.4 1971992 . N . . . . GT ./. +NC_002945.4 1971993 . N . . . . GT ./. +NC_002945.4 1971994 . N . . . . GT ./. +NC_002945.4 1971995 . N . . . . GT ./. +NC_002945.4 1971996 . N . . . . GT ./. +NC_002945.4 1971997 . N . . . . GT ./. +NC_002945.4 1986855 . N . . . . GT ./. +NC_002945.4 1986856 . N . . . . GT ./. +NC_002945.4 1986857 . N . . . . GT ./. +NC_002945.4 1986858 . N . . . . GT ./. +NC_002945.4 1986859 . N . . . . GT ./. +NC_002945.4 1986860 . N . . . . GT ./. +NC_002945.4 1986861 . N . . . . GT ./. +NC_002945.4 1986862 . N . . . . GT ./. +NC_002945.4 1986863 . N . . . . GT ./. +NC_002945.4 1986864 . N . . . . GT ./. +NC_002945.4 1986865 . N . . . . GT ./. +NC_002945.4 1986866 . N . . . . GT ./. +NC_002945.4 1986867 . N . . . . GT ./. +NC_002945.4 1986868 . N . . . . GT ./. +NC_002945.4 1986869 . N . . . . GT ./. +NC_002945.4 1986870 . N . . . . GT ./. +NC_002945.4 1986871 . N . . . . GT ./. +NC_002945.4 1986872 . N . . . . GT ./. +NC_002945.4 1986873 . N . . . . GT ./. +NC_002945.4 1986874 . N . . . . GT ./. +NC_002945.4 1986875 . N . . . . GT ./. +NC_002945.4 1986876 . N . . . . GT ./. +NC_002945.4 1986877 . N . . . . GT ./. +NC_002945.4 1986878 . N . . . . GT ./. +NC_002945.4 1986879 . N . . . . GT ./. +NC_002945.4 1986880 . N . . . . GT ./. +NC_002945.4 1986881 . N . . . . GT ./. +NC_002945.4 1986882 . N . . . . GT ./. +NC_002945.4 1986883 . N . . . . GT ./. +NC_002945.4 1986884 . N . . . . GT ./. +NC_002945.4 1986885 . N . . . . GT ./. +NC_002945.4 1986886 . N . . . . GT ./. +NC_002945.4 1986887 . N . . . . GT ./. +NC_002945.4 1986888 . N . . . . GT ./. +NC_002945.4 1986889 . N . . . . GT ./. +NC_002945.4 1986890 . N . . . . GT ./. +NC_002945.4 1986891 . N . . . . GT ./. +NC_002945.4 1986892 . N . . . . GT ./. +NC_002945.4 1986893 . N . . . . GT ./. +NC_002945.4 1986894 . N . . . . GT ./. +NC_002945.4 1986895 . N . . . . GT ./. +NC_002945.4 1986896 . N . . . . GT ./. +NC_002945.4 1986897 . N . . . . GT ./. +NC_002945.4 1986898 . N . . . . GT ./. +NC_002945.4 1986899 . N . . . . GT ./. +NC_002945.4 1986900 . N . . . . GT ./. +NC_002945.4 1986901 . N . . . . GT ./. +NC_002945.4 1986902 . N . . . . GT ./. +NC_002945.4 1986903 . N . . . . GT ./. +NC_002945.4 1986904 . N . . . . GT ./. +NC_002945.4 1986905 . N . . . . GT ./. +NC_002945.4 1986906 . N . . . . GT ./. +NC_002945.4 1986907 . N . . . . GT ./. +NC_002945.4 1986908 . N . . . . GT ./. +NC_002945.4 1986909 . N . . . . GT ./. +NC_002945.4 1986910 . N . . . . GT ./. +NC_002945.4 1986911 . N . . . . GT ./. +NC_002945.4 1986912 . N . . . . GT ./. +NC_002945.4 1986913 . N . . . . GT ./. +NC_002945.4 1986914 . N . . . . GT ./. +NC_002945.4 1986915 . N . . . . GT ./. +NC_002945.4 1986916 . N . . . . GT ./. +NC_002945.4 1986917 . N . . . . GT ./. +NC_002945.4 1986918 . N . . . . GT ./. +NC_002945.4 1986919 . N . . . . GT ./. +NC_002945.4 1986920 . N . . . . GT ./. +NC_002945.4 1986921 . N . . . . GT ./. +NC_002945.4 1986922 . N . . . . GT ./. +NC_002945.4 1986923 . N . . . . GT ./. +NC_002945.4 1986924 . N . . . . GT ./. +NC_002945.4 1986925 . N . . . . GT ./. +NC_002945.4 1986926 . N . . . . GT ./. +NC_002945.4 1986927 . N . . . . GT ./. +NC_002945.4 1986928 . N . . . . GT ./. +NC_002945.4 1986929 . N . . . . GT ./. +NC_002945.4 1986930 . N . . . . GT ./. +NC_002945.4 1986931 . N . . . . GT ./. +NC_002945.4 1986932 . N . . . . GT ./. +NC_002945.4 1986933 . N . . . . GT ./. +NC_002945.4 1986934 . N . . . . GT ./. +NC_002945.4 1986935 . N . . . . GT ./. +NC_002945.4 1986936 . N . . . . GT ./. +NC_002945.4 1986937 . N . . . . GT ./. +NC_002945.4 1986938 . N . . . . GT ./. +NC_002945.4 1986939 . N . . . . GT ./. +NC_002945.4 1986940 . N . . . . GT ./. +NC_002945.4 1986941 . N . . . . GT ./. +NC_002945.4 1986942 . N . . . . GT ./. +NC_002945.4 1986943 . N . . . . GT ./. +NC_002945.4 1986944 . N . . . . GT ./. +NC_002945.4 1986945 . N . . . . GT ./. +NC_002945.4 1986946 . N . . . . GT ./. +NC_002945.4 1986947 . N . . . . GT ./. +NC_002945.4 1986948 . N . . . . GT ./. +NC_002945.4 1986949 . N . . . . GT ./. +NC_002945.4 1986950 . N . . . . GT ./. +NC_002945.4 1986951 . N . . . . GT ./. +NC_002945.4 1986952 . N . . . . GT ./. +NC_002945.4 1986953 . N . . . . GT ./. +NC_002945.4 1986954 . N . . . . GT ./. +NC_002945.4 1986955 . N . . . . GT ./. +NC_002945.4 1986956 . N . . . . GT ./. +NC_002945.4 1986957 . N . . . . GT ./. +NC_002945.4 1986958 . N . . . . GT ./. +NC_002945.4 1986959 . N . . . . GT ./. +NC_002945.4 1986960 . N . . . . GT ./. +NC_002945.4 1986961 . N . . . . GT ./. +NC_002945.4 1986962 . N . . . . GT ./. +NC_002945.4 1986963 . N . . . . GT ./. +NC_002945.4 1986964 . N . . . . GT ./. +NC_002945.4 1986965 . N . . . . GT ./. +NC_002945.4 1986966 . N . . . . GT ./. +NC_002945.4 1986967 . N . . . . GT ./. +NC_002945.4 1986968 . N . . . . GT ./. +NC_002945.4 1986969 . N . . . . GT ./. +NC_002945.4 1986970 . N . . . . GT ./. +NC_002945.4 1986971 . N . . . . GT ./. +NC_002945.4 1986972 . N . . . . GT ./. +NC_002945.4 1986973 . N . . . . GT ./. +NC_002945.4 1986974 . N . . . . GT ./. +NC_002945.4 1986975 . N . . . . GT ./. +NC_002945.4 1986976 . N . . . . GT ./. +NC_002945.4 1996036 . G A 1074.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.805;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=34.67;ReadPosRankSum=1.701;SOR=5.486 GT:AD:DP:GQ:PL 1/1:1,30:31:82:1103,82,0 +NC_002945.4 2002061 . A G 6500.77 . AC=2;AF=1.00;AN=2;DP=211;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.96;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,210:210:99:6529,629,0 +NC_002945.4 2007303 . C G 9314.77 . AC=2;AF=1.00;AN=2;DP=336;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.81;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,335:335:99:9343,987,0 +NC_002945.4 2024890 . T C 7058.77 . AC=2;AF=1.00;AN=2;DP=235;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.17;SOR=1.692 GT:AD:DP:GQ:PL 1/1:0,234:234:99:7087,695,0 +NC_002945.4 2027869 . G A 6404.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.799;ClippingRankSum=0.000;DP=204;ExcessHet=3.0103;FS=3.533;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.55;ReadPosRankSum=1.940;SOR=0.618 GT:AD:DP:GQ:PL 1/1:1,202:203:99:6433,595,0 +NC_002945.4 2039619 . A G 8259.77 . AC=2;AF=1.00;AN=2;DP=269;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.94;SOR=1.422 GT:AD:DP:GQ:PL 1/1:0,267:267:99:8288,796,0 +NC_002945.4 2046459 . T G 112.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-7.187;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=62.753;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=1.03;ReadPosRankSum=2.589;SOR=5.633 GT:AD:DP:GQ:PL 0/1:68,42:110:99:141,0,1053 +NC_002945.4 2046882 . C T 8099.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.983;ClippingRankSum=0.000;DP=284;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.52;ReadPosRankSum=1.080;SOR=0.250 GT:AD:DP:GQ:PL 1/1:1,283:284:99:8128,802,0 +NC_002945.4 2049171 . A G 4143.77 . AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.58;SOR=1.253 GT:AD:DP:GQ:PL 1/1:0,109:109:99:4172,320,0 +NC_002945.4 2050664 . C T 7679.77 . AC=2;AF=1.00;AN=2;DP=265;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,264:264:99:7708,786,0 +NC_002945.4 2057553 . G A 4693.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.895;ClippingRankSum=0.000;DP=173;ExcessHet=3.0103;FS=6.076;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.45;ReadPosRankSum=-0.087;SOR=0.066 GT:AD:DP:GQ:PL 1/1:3,168:171:99:4722,471,0 +NC_002945.4 2059249 . G A 10709.77 . AC=2;AF=1.00;AN=2;DP=383;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.96;SOR=0.698 GT:AD:DP:GQ:PL 1/1:0,383:383:99:10738,1139,0 +NC_002945.4 2059920 . A G 8213.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.891;ClippingRankSum=0.000;DP=261;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.47;ReadPosRankSum=2.576;SOR=0.308 GT:AD:DP:GQ:PL 1/1:1,260:261:99:8242,771,0 +NC_002945.4 2060304 . T C 4795.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.895;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.90;MQRankSum=0.000;QD=29.97;ReadPosRankSum=4.523;SOR=0.718 GT:AD:DP:GQ:PL 1/1:2,158:160:99:4824,427,0 +NC_002945.4 2075405 . C T 7577.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.076;ClippingRankSum=0.000;DP=271;ExcessHet=3.0103;FS=3.124;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.96;ReadPosRankSum=-0.386;SOR=0.318 GT:AD:DP:GQ:PL 1/1:1,270:271:99:7606,797,0 +NC_002945.4 2079345 . T C 7464.77 . AC=2;AF=1.00;AN=2;DP=253;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.62;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,252:252:99:7493,750,0 +NC_002945.4 2089475 . C T 7606.77 . AC=2;AF=1.00;AN=2;DP=244;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.30;SOR=1.378 GT:AD:DP:GQ:PL 1/1:0,243:243:99:7635,724,0 +NC_002945.4 2099043 . T C 5481.77 . AC=2;AF=1.00;AN=2;DP=173;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.44;SOR=2.462 GT:AD:DP:GQ:PL 1/1:0,169:169:99:5510,505,0 +NC_002945.4 2108042 . G A 5119.77 . AC=2;AF=1.00;AN=2;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.26;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,175:175:99:5148,517,0 +NC_002945.4 2140772 . N . . . . GT ./. +NC_002945.4 2140773 . N . . . . GT ./. +NC_002945.4 2145868 . T C 8934.77 . AC=2;AF=1.00;AN=2;DP=295;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.29;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,295:295:99:8963,882,0 +NC_002945.4 2150565 . G A 8639.77 . AC=2;AF=1.00;AN=2;DP=301;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.90;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,299:299:99:8668,888,0 +NC_002945.4 2186489 . C T 9516.77 . AC=2;AF=1.00;AN=2;DP=326;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.28;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,325:325:99:9545,970,0 +NC_002945.4 2215255 . G A 4313.77 . AC=2;AF=1.00;AN=2;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.19;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4342,392,0 +NC_002945.4 2222708 . C G 7090.77 . AC=2;AF=1.00;AN=2;DP=220;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.38;SOR=1.242 GT:AD:DP:GQ:PL 1/1:0,219:219:99:7119,652,0 +NC_002945.4 2244454 . C G 5424.77 . AC=2;AF=1.00;AN=2;DP=192;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.55;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,190:190:99:5453,565,0 +NC_002945.4 2246992 . C G 7949.77 . AC=2;AF=1.00;AN=2;DP=266;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.11;SOR=0.964 GT:AD:DP:GQ:PL 1/1:0,264:264:99:7978,787,0 +NC_002945.4 2249617 . A G 7430.77 . AC=2;AF=1.00;AN=2;DP=237;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.62;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,235:235:99:7459,703,0 +NC_002945.4 2256653 . C A 3996.77 . AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.61;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,135:135:99:4025,399,0 +NC_002945.4 2257546 . C A 5988.77 . AC=2;AF=1.00;AN=2;DP=203;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.79;SOR=1.333 GT:AD:DP:GQ:PL 1/1:0,201:201:99:6017,590,0 +NC_002945.4 2283200 . A G 7108.77 . AC=2;AF=1.00;AN=2;DP=241;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.50;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,241:241:99:7137,717,0 +NC_002945.4 2283218 . C G 10440.77 . AC=2;AF=1.00;AN=2;DP=233;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.02;SOR=0.755 GT:AD:DP:GQ:PL 1/1:0,233:233:99:10469,701,0 +NC_002945.4 2283220 . A G 10485.77 . AC=2;AF=1.00;AN=2;DP=233;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.06;SOR=0.755 GT:AD:DP:GQ:PL 1/1:0,233:233:99:10514,704,0 +NC_002945.4 2283227 . A G 10834.77 . AC=2;AF=1.00;AN=2;DP=239;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.53;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,239:239:99:10863,728,0 +NC_002945.4 2283235 . G A 11042.77 . AC=2;AF=1.00;AN=2;DP=234;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,234:234:99:11071,744,0 +NC_002945.4 2283236 . G C 11042.77 . AC=2;AF=1.00;AN=2;DP=240;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.60;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,240:240:99:11071,744,0 +NC_002945.4 2283350 . C T 8786.77 . AC=2;AF=1.00;AN=2;DP=197;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.96;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,197:197:99:8815,593,0 +NC_002945.4 2283353 . G T 8786.77 . AC=2;AF=1.00;AN=2;DP=194;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.55;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,194:194:99:8815,593,0 +NC_002945.4 2283355 . G C 8701.77 . AC=2;AF=1.00;AN=2;DP=194;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.69;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,194:194:99:8730,584,0 +NC_002945.4 2283362 . A T 8701.77 . AC=2;AF=1.00;AN=2;DP=191;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.70;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,191:191:99:8730,584,0 +NC_002945.4 2283371 . C A 8576.77 . AC=2;AF=1.00;AN=2;DP=192;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.95;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,192:192:99:8605,577,0 +NC_002945.4 2284754 . G C 4657.77 . AC=2;AF=1.00;AN=2;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.55;QD=28.32;SOR=2.235 GT:AD:DP:GQ:PL 1/1:0,103:103:99:4686,316,0 +NC_002945.4 2317251 . C T 7010.77 . AC=2;AF=1.00;AN=2;DP=227;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.88;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,227:227:99:7039,679,0 +NC_002945.4 2325841 . N . . . . GT ./. +NC_002945.4 2325842 . N . . . . GT ./. +NC_002945.4 2325843 . N . . . . GT ./. +NC_002945.4 2325844 . N . . . . GT ./. +NC_002945.4 2326260 . N . . . . GT ./. +NC_002945.4 2326261 . N . . . . GT ./. +NC_002945.4 2326262 . N . . . . GT ./. +NC_002945.4 2326263 . N . . . . GT ./. +NC_002945.4 2326264 . N . . . . GT ./. +NC_002945.4 2326265 . N . . . . GT ./. +NC_002945.4 2326266 . N . . . . GT ./. +NC_002945.4 2333994 . T C 6298.77 . AC=2;AF=1.00;AN=2;DP=224;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,222:222:99:6327,658,0 +NC_002945.4 2338765 . G A 7208.77 . AC=2;AF=1.00;AN=2;DP=254;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.38;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,254:254:99:7237,758,0 +NC_002945.4 2339770 . A G 6564.77 . AC=2;AF=1.00;AN=2;DP=205;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.34;SOR=0.944 GT:AD:DP:GQ:PL 1/1:0,203:203:99:6593,604,0 +NC_002945.4 2358298 . T C 7410.77 . AC=2;AF=1.00;AN=2;DP=237;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.27;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,237:237:99:7439,707,0 +NC_002945.4 2361398 . T C 5974.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.644;ClippingRankSum=0.000;DP=189;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.78;ReadPosRankSum=-0.550;SOR=0.368 GT:AD:DP:GQ:PL 1/1:1,187:188:99:6003,549,0 +NC_002945.4 2372329 . N . . . . GT ./. +NC_002945.4 2372330 . N . . . . GT ./. +NC_002945.4 2372331 . N . . . . GT ./. +NC_002945.4 2372332 . N . . . . GT ./. +NC_002945.4 2372333 . N . . . . GT ./. +NC_002945.4 2372334 . N . . . . GT ./. +NC_002945.4 2372335 . N . . . . GT ./. +NC_002945.4 2372336 . N . . . . GT ./. +NC_002945.4 2372337 . N . . . . GT ./. +NC_002945.4 2372338 . N . . . . GT ./. +NC_002945.4 2372339 . N . . . . GT ./. +NC_002945.4 2372340 . N . . . . GT ./. +NC_002945.4 2372341 . N . . . . GT ./. +NC_002945.4 2372342 . N . . . . GT ./. +NC_002945.4 2372343 . N . . . . GT ./. +NC_002945.4 2372344 . N . . . . GT ./. +NC_002945.4 2372345 . N . . . . GT ./. +NC_002945.4 2372346 . N . . . . GT ./. +NC_002945.4 2372347 . N . . . . GT ./. +NC_002945.4 2372348 . N . . . . GT ./. +NC_002945.4 2372349 . N . . . . GT ./. +NC_002945.4 2372350 . N . . . . GT ./. +NC_002945.4 2372351 . N . . . . GT ./. +NC_002945.4 2372352 . N . . . . GT ./. +NC_002945.4 2372353 . N . . . . GT ./. +NC_002945.4 2372354 . N . . . . GT ./. +NC_002945.4 2372355 . N . . . . GT ./. +NC_002945.4 2372356 . N . . . . GT ./. +NC_002945.4 2372357 . N . . . . GT ./. +NC_002945.4 2372358 . N . . . . GT ./. +NC_002945.4 2372359 . N . . . . GT ./. +NC_002945.4 2372360 . N . . . . GT ./. +NC_002945.4 2372361 . N . . . . GT ./. +NC_002945.4 2375846 . G A 4244.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.694;ClippingRankSum=0.000;DP=191;ExcessHet=3.0103;FS=3.208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=23.58;ReadPosRankSum=-0.314;SOR=0.385 GT:AD:DP:GQ:PL 1/1:1,179:180:99:4273,504,0 +NC_002945.4 2378324 . C T 6501.77 . AC=2;AF=1.00;AN=2;DP=239;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.55;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,236:236:99:6530,701,0 +NC_002945.4 2381437 . C A 9016.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.985;ClippingRankSum=0.000;DP=304;ExcessHet=3.0103;FS=3.112;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.76;ReadPosRankSum=0.885;SOR=0.308 GT:AD:DP:GQ:PL 1/1:1,302:303:99:9045,895,0 +NC_002945.4 2397934 . C T 2299.77 . AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.08;SOR=2.568 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2328,218,0 +NC_002945.4 2408931 . N . . . . GT ./. +NC_002945.4 2408951 . N . . . . GT ./. +NC_002945.4 2408952 . N . . . . GT ./. +NC_002945.4 2408953 . N . . . . GT ./. +NC_002945.4 2408954 . N . . . . GT ./. +NC_002945.4 2408955 . N . . . . GT ./. +NC_002945.4 2408956 . N . . . . GT ./. +NC_002945.4 2408957 . N . . . . GT ./. +NC_002945.4 2408958 . N . . . . GT ./. +NC_002945.4 2408959 . N . . . . GT ./. +NC_002945.4 2408960 . N . . . . GT ./. +NC_002945.4 2408961 . N . . . . GT ./. +NC_002945.4 2408962 . N . . . . GT ./. +NC_002945.4 2408963 . N . . . . GT ./. +NC_002945.4 2408964 . N . . . . GT ./. +NC_002945.4 2408965 . N . . . . GT ./. +NC_002945.4 2408966 . N . . . . GT ./. +NC_002945.4 2408967 . N . . . . GT ./. +NC_002945.4 2408968 . N . . . . GT ./. +NC_002945.4 2408969 . N . . . . GT ./. +NC_002945.4 2408970 . N . . . . GT ./. +NC_002945.4 2408971 . N . . . . GT ./. +NC_002945.4 2408972 . N . . . . GT ./. +NC_002945.4 2408973 . N . . . . GT ./. +NC_002945.4 2408974 . N . . . . GT ./. +NC_002945.4 2408975 . N . . . . GT ./. +NC_002945.4 2408976 . N . . . . GT ./. +NC_002945.4 2408977 . N . . . . GT ./. +NC_002945.4 2408978 . N . . . . GT ./. +NC_002945.4 2408979 . N . . . . GT ./. +NC_002945.4 2408980 . N . . . . GT ./. +NC_002945.4 2408981 . N . . . . GT ./. +NC_002945.4 2408982 . N . . . . GT ./. +NC_002945.4 2408983 . N . . . . GT ./. +NC_002945.4 2408984 . N . . . . GT ./. +NC_002945.4 2408985 . N . . . . GT ./. +NC_002945.4 2408986 . N . . . . GT ./. +NC_002945.4 2408987 . N . . . . GT ./. +NC_002945.4 2412437 . G A 5042.77 . AC=2;AF=1.00;AN=2;DP=182;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.86;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,181:181:99:5071,537,0 +NC_002945.4 2418267 . G A 6239.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.771;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=3.200;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.57;ReadPosRankSum=1.035;SOR=0.377 GT:AD:DP:GQ:PL 1/1:1,210:211:99:6268,616,0 +NC_002945.4 2422964 . G A 966.77 . AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=34.83;QD=34.53;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,28:28:84:995,84,0 +NC_002945.4 2423049 . T G 896.77 . AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=33.65;QD=32.55;SOR=1.893 GT:AD:DP:GQ:PL 1/1:0,25:25:75:925,75,0 +NC_002945.4 2425939 . G A 7090.77 . AC=2;AF=1.00;AN=2;DP=247;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.06;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,244:244:99:7119,726,0 +NC_002945.4 2426072 . G A 7305.77 . AC=2;AF=1.00;AN=2;DP=264;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.88;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,262:262:99:7334,770,0 +NC_002945.4 2458252 . C T 9192.77 . AC=2;AF=1.00;AN=2;DP=318;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.91;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,318:318:99:9221,948,0 +NC_002945.4 2479007 . C T 8049.77 . AC=2;AF=1.00;AN=2;DP=279;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.06;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,277:277:99:8078,826,0 +NC_002945.4 2497022 . C G 10187.77 . AC=2;AF=1.00;AN=2;DP=322;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.64;SOR=1.068 GT:AD:DP:GQ:PL 1/1:0,322:322:99:10216,960,0 +NC_002945.4 2506199 . A C 8495.77 . AC=2;AF=1.00;AN=2;DP=287;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.71;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,286:286:99:8524,851,0 +NC_002945.4 2508626 . G T 7842.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.633;ClippingRankSum=0.000;DP=276;ExcessHet=3.0103;FS=7.758;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.26;ReadPosRankSum=-0.424;SOR=0.806 GT:AD:DP:GQ:PL 1/1:2,266:268:99:7871,778,0 +NC_002945.4 2512809 . A C 8540.77 . AC=2;AF=1.00;AN=2;DP=282;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.29;SOR=0.980 GT:AD:DP:GQ:PL 1/1:0,282:282:99:8569,840,0 +NC_002945.4 2513801 . C A 4793.77 . AC=2;AF=1.00;AN=2;DP=169;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.05;SOR=1.638 GT:AD:DP:GQ:PL 1/1:0,165:165:99:4822,487,0 +NC_002945.4 2515471 . N . . . . GT ./. +NC_002945.4 2524942 . G A 5458.77 . AC=2;AF=1.00;AN=2;DP=183;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.83;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,183:183:99:5487,542,0 +NC_002945.4 2528517 . T C 9471.77 . AC=2;AF=1.00;AN=2;DP=314;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.16;SOR=0.857 GT:AD:DP:GQ:PL 1/1:0,314:314:99:9500,935,0 +NC_002945.4 2529413 . G C 7588.77 . AC=2;AF=1.00;AN=2;DP=237;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,234:234:99:7617,700,0 +NC_002945.4 2532958 . G A 6695.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.925;ClippingRankSum=0.000;DP=245;ExcessHet=3.0103;FS=11.724;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.67;ReadPosRankSum=-0.927;SOR=0.818 GT:AD:DP:GQ:PL 1/1:3,239:242:99:6724,681,0 +NC_002945.4 2537125 . T C 6239.77 . AC=2;AF=1.00;AN=2;DP=218;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.75;SOR=1.117 GT:AD:DP:GQ:PL 1/1:0,217:217:99:6268,643,0 +NC_002945.4 2665769 . N . . . . GT ./. +NC_002945.4 2665770 . N . . . . GT ./. +NC_002945.4 2665771 . N . . . . GT ./. +NC_002945.4 2665772 . N . . . . GT ./. +NC_002945.4 2665773 . N . . . . GT ./. +NC_002945.4 2665774 . N . . . . GT ./. +NC_002945.4 2665775 . N . . . . GT ./. +NC_002945.4 2665776 . N . . . . GT ./. +NC_002945.4 2665777 . N . . . . GT ./. +NC_002945.4 2665778 . N . . . . GT ./. +NC_002945.4 2665779 . N . . . . GT ./. +NC_002945.4 2665780 . N . . . . GT ./. +NC_002945.4 2665781 . N . . . . GT ./. +NC_002945.4 2665782 . N . . . . GT ./. +NC_002945.4 2665783 . N . . . . GT ./. +NC_002945.4 2665784 . N . . . . GT ./. +NC_002945.4 2665785 . N . . . . GT ./. +NC_002945.4 2665786 . N . . . . GT ./. +NC_002945.4 2665787 . N . . . . GT ./. +NC_002945.4 2665788 . N . . . . GT ./. +NC_002945.4 2665789 . N . . . . GT ./. +NC_002945.4 2665790 . N . . . . GT ./. +NC_002945.4 2665791 . N . . . . GT ./. +NC_002945.4 2665792 . N . . . . GT ./. +NC_002945.4 2665793 . N . . . . GT ./. +NC_002945.4 2665794 . N . . . . GT ./. +NC_002945.4 2665795 . N . . . . GT ./. +NC_002945.4 2665796 . N . . . . GT ./. +NC_002945.4 2665797 . N . . . . GT ./. +NC_002945.4 2665798 . N . . . . GT ./. +NC_002945.4 2665799 . N . . . . GT ./. +NC_002945.4 2665800 . N . . . . GT ./. +NC_002945.4 2665801 . N . . . . GT ./. +NC_002945.4 2665802 . N . . . . GT ./. +NC_002945.4 2665803 . N . . . . GT ./. +NC_002945.4 2665804 . N . . . . GT ./. +NC_002945.4 2665805 . N . . . . GT ./. +NC_002945.4 2667489 . T C 8437.77 . AC=2;AF=1.00;AN=2;DP=293;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.90;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,292:292:99:8466,869,0 +NC_002945.4 2755931 . T G 6960.77 . AC=2;AF=1.00;AN=2;DP=212;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.47;SOR=1.509 GT:AD:DP:GQ:PL 1/1:0,208:208:99:6989,621,0 +NC_002945.4 2773444 . G A 63.28 . AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 +NC_002945.4 2776121 . N . . . . GT ./. +NC_002945.4 2776122 . N . . . . GT ./. +NC_002945.4 2776123 . N . . . . GT ./. +NC_002945.4 2776124 . N . . . . GT ./. +NC_002945.4 2776125 . N . . . . GT ./. +NC_002945.4 2776126 . N . . . . GT ./. +NC_002945.4 2776127 . N . . . . GT ./. +NC_002945.4 2776128 . N . . . . GT ./. +NC_002945.4 2776129 . N . . . . GT ./. +NC_002945.4 2776130 . N . . . . GT ./. +NC_002945.4 2776139 . N . . . . GT ./. +NC_002945.4 2776164 . N . . . . GT ./. +NC_002945.4 2776165 . N . . . . GT ./. +NC_002945.4 2776166 . N . . . . GT ./. +NC_002945.4 2776167 . N . . . . GT ./. +NC_002945.4 2776168 . N . . . . GT ./. +NC_002945.4 2776169 . N . . . . GT ./. +NC_002945.4 2776170 . N . . . . GT ./. +NC_002945.4 2776171 . N . . . . GT ./. +NC_002945.4 2776172 . N . . . . GT ./. +NC_002945.4 2776173 . N . . . . GT ./. +NC_002945.4 2776174 . N . . . . GT ./. +NC_002945.4 2776175 . N . . . . GT ./. +NC_002945.4 2776176 . N . . . . GT ./. +NC_002945.4 2776177 . N . . . . GT ./. +NC_002945.4 2776178 . N . . . . GT ./. +NC_002945.4 2776179 . N . . . . GT ./. +NC_002945.4 2776180 . N . . . . GT ./. +NC_002945.4 2776181 . N . . . . GT ./. +NC_002945.4 2776182 . N . . . . GT ./. +NC_002945.4 2776183 . N . . . . GT ./. +NC_002945.4 2776184 . N . . . . GT ./. +NC_002945.4 2776185 . N . . . . GT ./. +NC_002945.4 2776186 . N . . . . GT ./. +NC_002945.4 2776187 . N . . . . GT ./. +NC_002945.4 2776188 . N . . . . GT ./. +NC_002945.4 2776189 . N . . . . GT ./. +NC_002945.4 2776190 . N . . . . GT ./. +NC_002945.4 2776191 . N . . . . GT ./. +NC_002945.4 2776192 . N . . . . GT ./. +NC_002945.4 2776193 . N . . . . GT ./. +NC_002945.4 2776194 . N . . . . GT ./. +NC_002945.4 2776195 . N . . . . GT ./. +NC_002945.4 2776196 . N . . . . GT ./. +NC_002945.4 2776197 . N . . . . GT ./. +NC_002945.4 2776198 . N . . . . GT ./. +NC_002945.4 2776199 . N . . . . GT ./. +NC_002945.4 2776200 . N . . . . GT ./. +NC_002945.4 2776201 . N . . . . GT ./. +NC_002945.4 2776202 . N . . . . GT ./. +NC_002945.4 2776203 . N . . . . GT ./. +NC_002945.4 2776204 . N . . . . GT ./. +NC_002945.4 2776205 . N . . . . GT ./. +NC_002945.4 2776206 . N . . . . GT ./. +NC_002945.4 2776207 . N . . . . GT ./. +NC_002945.4 2776208 . N . . . . GT ./. +NC_002945.4 2776209 . N . . . . GT ./. +NC_002945.4 2776210 . N . . . . GT ./. +NC_002945.4 2776211 . N . . . . GT ./. +NC_002945.4 2776212 . N . . . . GT ./. +NC_002945.4 2776213 . N . . . . GT ./. +NC_002945.4 2776214 . N . . . . GT ./. +NC_002945.4 2776215 . N . . . . GT ./. +NC_002945.4 2776216 . N . . . . GT ./. +NC_002945.4 2776217 . N . . . . GT ./. +NC_002945.4 2776218 . N . . . . GT ./. +NC_002945.4 2776219 . N . . . . GT ./. +NC_002945.4 2776220 . N . . . . GT ./. +NC_002945.4 2776221 . N . . . . GT ./. +NC_002945.4 2776222 . N . . . . GT ./. +NC_002945.4 2776223 . N . . . . GT ./. +NC_002945.4 2776224 . N . . . . GT ./. +NC_002945.4 2776225 . N . . . . GT ./. +NC_002945.4 2776226 . N . . . . GT ./. +NC_002945.4 2776227 . N . . . . GT ./. +NC_002945.4 2776228 . N . . . . GT ./. +NC_002945.4 2776229 . N . . . . GT ./. +NC_002945.4 2776230 . N . . . . GT ./. +NC_002945.4 2776231 . N . . . . GT ./. +NC_002945.4 2776232 . N . . . . GT ./. +NC_002945.4 2776233 . N . . . . GT ./. +NC_002945.4 2776234 . N . . . . GT ./. +NC_002945.4 2776235 . N . . . . GT ./. +NC_002945.4 2776236 . N . . . . GT ./. +NC_002945.4 2776237 . N . . . . GT ./. +NC_002945.4 2776238 . N . . . . GT ./. +NC_002945.4 2776239 . N . . . . GT ./. +NC_002945.4 2776240 . N . . . . GT ./. +NC_002945.4 2776241 . N . . . . GT ./. +NC_002945.4 2776242 . N . . . . GT ./. +NC_002945.4 2776243 . N . . . . GT ./. +NC_002945.4 2776244 . N . . . . GT ./. +NC_002945.4 2776245 . N . . . . GT ./. +NC_002945.4 2776246 . N . . . . GT ./. +NC_002945.4 2776247 . N . . . . GT ./. +NC_002945.4 2776248 . N . . . . GT ./. +NC_002945.4 2776249 . N . . . . GT ./. +NC_002945.4 2776250 . N . . . . GT ./. +NC_002945.4 2776251 . N . . . . GT ./. +NC_002945.4 2776252 . N . . . . GT ./. +NC_002945.4 2776253 . N . . . . GT ./. +NC_002945.4 2776254 . N . . . . GT ./. +NC_002945.4 2776255 . N . . . . GT ./. +NC_002945.4 2776256 . N . . . . GT ./. +NC_002945.4 2776257 . N . . . . GT ./. +NC_002945.4 2776258 . N . . . . GT ./. +NC_002945.4 2776259 . N . . . . GT ./. +NC_002945.4 2776260 . N . . . . GT ./. +NC_002945.4 2776261 . N . . . . GT ./. +NC_002945.4 2776262 . N . . . . GT ./. +NC_002945.4 2776263 . N . . . . GT ./. +NC_002945.4 2776264 . N . . . . GT ./. +NC_002945.4 2776265 . N . . . . GT ./. +NC_002945.4 2776266 . N . . . . GT ./. +NC_002945.4 2776267 . N . . . . GT ./. +NC_002945.4 2776268 . N . . . . GT ./. +NC_002945.4 2776269 . N . . . . GT ./. +NC_002945.4 2776270 . N . . . . GT ./. +NC_002945.4 2776271 . N . . . . GT ./. +NC_002945.4 2776272 . N . . . . GT ./. +NC_002945.4 2776273 . N . . . . GT ./. +NC_002945.4 2776274 . N . . . . GT ./. +NC_002945.4 2776275 . N . . . . GT ./. +NC_002945.4 2776276 . N . . . . GT ./. +NC_002945.4 2776277 . N . . . . GT ./. +NC_002945.4 2776278 . N . . . . GT ./. +NC_002945.4 2776279 . N . . . . GT ./. +NC_002945.4 2776280 . N . . . . GT ./. +NC_002945.4 2776281 . N . . . . GT ./. +NC_002945.4 2776282 . N . . . . GT ./. +NC_002945.4 2776283 . N . . . . GT ./. +NC_002945.4 2776284 . N . . . . GT ./. +NC_002945.4 2776285 . N . . . . GT ./. +NC_002945.4 2776286 . N . . . . GT ./. +NC_002945.4 2776287 . N . . . . GT ./. +NC_002945.4 2776288 . N . . . . GT ./. +NC_002945.4 2776289 . N . . . . GT ./. +NC_002945.4 2776290 . N . . . . GT ./. +NC_002945.4 2776291 . N . . . . GT ./. +NC_002945.4 2776292 . N . . . . GT ./. +NC_002945.4 2776293 . N . . . . GT ./. +NC_002945.4 2776294 . N . . . . GT ./. +NC_002945.4 2776295 . N . . . . GT ./. +NC_002945.4 2776296 . N . . . . GT ./. +NC_002945.4 2776297 . N . . . . GT ./. +NC_002945.4 2776298 . N . . . . GT ./. +NC_002945.4 2776299 . N . . . . GT ./. +NC_002945.4 2776300 . N . . . . GT ./. +NC_002945.4 2776301 . N . . . . GT ./. +NC_002945.4 2776302 . N . . . . GT ./. +NC_002945.4 2776303 . N . . . . GT ./. +NC_002945.4 2776304 . N . . . . GT ./. +NC_002945.4 2776305 . N . . . . GT ./. +NC_002945.4 2776306 . N . . . . GT ./. +NC_002945.4 2776307 . N . . . . GT ./. +NC_002945.4 2776308 . N . . . . GT ./. +NC_002945.4 2776309 . N . . . . GT ./. +NC_002945.4 2776310 . N . . . . GT ./. +NC_002945.4 2776311 . N . . . . GT ./. +NC_002945.4 2776312 . N . . . . GT ./. +NC_002945.4 2776313 . N . . . . GT ./. +NC_002945.4 2776314 . N . . . . GT ./. +NC_002945.4 2776315 . N . . . . GT ./. +NC_002945.4 2776316 . N . . . . GT ./. +NC_002945.4 2776317 . N . . . . GT ./. +NC_002945.4 2776856 . N . . . . GT ./. +NC_002945.4 2776857 . N . . . . GT ./. +NC_002945.4 2776858 . N . . . . GT ./. +NC_002945.4 2776859 . N . . . . GT ./. +NC_002945.4 2776860 . N . . . . GT ./. +NC_002945.4 2776861 . N . . . . GT ./. +NC_002945.4 2776862 . N . . . . GT ./. +NC_002945.4 2776863 . N . . . . GT ./. +NC_002945.4 2776864 . N . . . . GT ./. +NC_002945.4 2776865 . N . . . . GT ./. +NC_002945.4 2776866 . N . . . . GT ./. +NC_002945.4 2776867 . N . . . . GT ./. +NC_002945.4 2776868 . N . . . . GT ./. +NC_002945.4 2776869 . N . . . . GT ./. +NC_002945.4 2776870 . N . . . . GT ./. +NC_002945.4 2776871 . N . . . . GT ./. +NC_002945.4 2776872 . N . . . . GT ./. +NC_002945.4 2776873 . N . . . . GT ./. +NC_002945.4 2776874 . N . . . . GT ./. +NC_002945.4 2776875 . N . . . . GT ./. +NC_002945.4 2776876 . N . . . . GT ./. +NC_002945.4 2776877 . N . . . . GT ./. +NC_002945.4 2776878 . N . . . . GT ./. +NC_002945.4 2776879 . N . . . . GT ./. +NC_002945.4 2776880 . N . . . . GT ./. +NC_002945.4 2776881 . N . . . . GT ./. +NC_002945.4 2776882 . N . . . . GT ./. +NC_002945.4 2776883 . N . . . . GT ./. +NC_002945.4 2776884 . N . . . . GT ./. +NC_002945.4 2776885 . N . . . . GT ./. +NC_002945.4 2776886 . N . . . . GT ./. +NC_002945.4 2776887 . N . . . . GT ./. +NC_002945.4 2776888 . N . . . . GT ./. +NC_002945.4 2776889 . N . . . . GT ./. +NC_002945.4 2776890 . N . . . . GT ./. +NC_002945.4 2776891 . N . . . . GT ./. +NC_002945.4 2776892 . N . . . . GT ./. +NC_002945.4 2776893 . N . . . . GT ./. +NC_002945.4 2776894 . N . . . . GT ./. +NC_002945.4 2776895 . N . . . . GT ./. +NC_002945.4 2776896 . N . . . . GT ./. +NC_002945.4 2776897 . N . . . . GT ./. +NC_002945.4 2776898 . N . . . . GT ./. +NC_002945.4 2776899 . N . . . . GT ./. +NC_002945.4 2776900 . N . . . . GT ./. +NC_002945.4 2776901 . N . . . . GT ./. +NC_002945.4 2776902 . N . . . . GT ./. +NC_002945.4 2776903 . N . . . . GT ./. +NC_002945.4 2776904 . N . . . . GT ./. +NC_002945.4 2776905 . N . . . . GT ./. +NC_002945.4 2776906 . N . . . . GT ./. +NC_002945.4 2776907 . N . . . . GT ./. +NC_002945.4 2776908 . N . . . . GT ./. +NC_002945.4 2776909 . N . . . . GT ./. +NC_002945.4 2776910 . N . . . . GT ./. +NC_002945.4 2776911 . N . . . . GT ./. +NC_002945.4 2776912 . N . . . . GT ./. +NC_002945.4 2776913 . N . . . . GT ./. +NC_002945.4 2776914 . N . . . . GT ./. +NC_002945.4 2776915 . N . . . . GT ./. +NC_002945.4 2776916 . N . . . . GT ./. +NC_002945.4 2776917 . N . . . . GT ./. +NC_002945.4 2776918 . N . . . . GT ./. +NC_002945.4 2776919 . N . . . . GT ./. +NC_002945.4 2776920 . N . . . . GT ./. +NC_002945.4 2776921 . N . . . . GT ./. +NC_002945.4 2776922 . N . . . . GT ./. +NC_002945.4 2776923 . N . . . . GT ./. +NC_002945.4 2776924 . N . . . . GT ./. +NC_002945.4 2776925 . N . . . . GT ./. +NC_002945.4 2806603 . T C 9831.77 . AC=2;AF=1.00;AN=2;DP=324;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.82;SOR=1.150 GT:AD:DP:GQ:PL 1/1:0,319:319:99:9860,950,0 +NC_002945.4 2819831 . A G 6023.77 . AC=2;AF=1.00;AN=2;DP=194;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.05;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,194:194:99:6052,579,0 +NC_002945.4 2823105 . G C 9167.77 . AC=2;AF=1.00;AN=2;DP=285;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.17;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,285:285:99:9196,854,0 +NC_002945.4 2838052 . T C 11087.77 . AC=2;AF=1.00;AN=2;DP=363;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.99;QD=30.80;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,360:360:99:11116,1074,0 +NC_002945.4 2852055 . N . . . . GT ./. +NC_002945.4 2852056 . N . . . . GT ./. +NC_002945.4 2852057 . N . . . . GT ./. +NC_002945.4 2852058 . N . . . . GT ./. +NC_002945.4 2852059 . N . . . . GT ./. +NC_002945.4 2852060 . N . . . . GT ./. +NC_002945.4 2852061 . N . . . . GT ./. +NC_002945.4 2852062 . N . . . . GT ./. +NC_002945.4 2852063 . N . . . . GT ./. +NC_002945.4 2852064 . N . . . . GT ./. +NC_002945.4 2852065 . N . . . . GT ./. +NC_002945.4 2852066 . N . . . . GT ./. +NC_002945.4 2852067 . N . . . . GT ./. +NC_002945.4 2852068 . N . . . . GT ./. +NC_002945.4 2852069 . N . . . . GT ./. +NC_002945.4 2852070 . N . . . . GT ./. +NC_002945.4 2852071 . N . . . . GT ./. +NC_002945.4 2852072 . N . . . . GT ./. +NC_002945.4 2852073 . N . . . . GT ./. +NC_002945.4 2852074 . N . . . . GT ./. +NC_002945.4 2852075 . N . . . . GT ./. +NC_002945.4 2852076 . N . . . . GT ./. +NC_002945.4 2852077 . N . . . . GT ./. +NC_002945.4 2852078 . N . . . . GT ./. +NC_002945.4 2852079 . N . . . . GT ./. +NC_002945.4 2852080 . N . . . . GT ./. +NC_002945.4 2852081 . N . . . . GT ./. +NC_002945.4 2852082 . N . . . . GT ./. +NC_002945.4 2852083 . N . . . . GT ./. +NC_002945.4 2852084 . N . . . . GT ./. +NC_002945.4 2852085 . N . . . . GT ./. +NC_002945.4 2852086 . N . . . . GT ./. +NC_002945.4 2852087 . N . . . . GT ./. +NC_002945.4 2852088 . N . . . . GT ./. +NC_002945.4 2852089 . N . . . . GT ./. +NC_002945.4 2852090 . N . . . . GT ./. +NC_002945.4 2852091 . N . . . . GT ./. +NC_002945.4 2852092 . N . . . . GT ./. +NC_002945.4 2852093 . N . . . . GT ./. +NC_002945.4 2852094 . N . . . . GT ./. +NC_002945.4 2852095 . N . . . . GT ./. +NC_002945.4 2852096 . N . . . . GT ./. +NC_002945.4 2852097 . N . . . . GT ./. +NC_002945.4 2852098 . N . . . . GT ./. +NC_002945.4 2852099 . N . . . . GT ./. +NC_002945.4 2852100 . N . . . . GT ./. +NC_002945.4 2852101 . N . . . . GT ./. +NC_002945.4 2852102 . N . . . . GT ./. +NC_002945.4 2870624 . T C 7988.77 . AC=2;AF=1.00;AN=2;DP=255;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.33;SOR=1.004 GT:AD:DP:GQ:PL 1/1:0,255:255:99:8017,762,0 +NC_002945.4 2886118 . C T 8430.77 . AC=2;AF=1.00;AN=2;DP=314;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.85;SOR=0.932 GT:AD:DP:GQ:PL 1/1:0,314:314:99:8459,931,0 +NC_002945.4 2911106 . C T 5772.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=202;ExcessHet=3.0103;FS=3.644;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.01;ReadPosRankSum=-0.406;SOR=0.697 GT:AD:DP:GQ:PL 1/1:1,198:199:99:5801,576,0 +NC_002945.4 2924775 . A G 10513.77 . AC=2;AF=1.00;AN=2;DP=352;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.95;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,351:351:99:10542,1050,0 +NC_002945.4 2932324 . G A 345.77 . AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.58;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:374,30,0 +NC_002945.4 2933389 . N . . . . GT ./. +NC_002945.4 2933390 . N . . . . GT ./. +NC_002945.4 2933391 . N . . . . GT ./. +NC_002945.4 2933392 . N . . . . GT ./. +NC_002945.4 2933393 . N . . . . GT ./. +NC_002945.4 2933394 . N . . . . GT ./. +NC_002945.4 2933597 . N . . . . GT ./. +NC_002945.4 2933598 . N . . . . GT ./. +NC_002945.4 2933599 . N . . . . GT ./. +NC_002945.4 2933600 . N . . . . GT ./. +NC_002945.4 2933601 . N . . . . GT ./. +NC_002945.4 2933602 . N . . . . GT ./. +NC_002945.4 2933603 . N . . . . GT ./. +NC_002945.4 2933604 . N . . . . GT ./. +NC_002945.4 2933605 . N . . . . GT ./. +NC_002945.4 2933606 . N . . . . GT ./. +NC_002945.4 2933607 . N . . . . GT ./. +NC_002945.4 2933608 . N . . . . GT ./. +NC_002945.4 2933609 . N . . . . GT ./. +NC_002945.4 2933610 . N . . . . GT ./. +NC_002945.4 2933611 . N . . . . GT ./. +NC_002945.4 2933612 . N . . . . GT ./. +NC_002945.4 2933613 . N . . . . GT ./. +NC_002945.4 2933614 . N . . . . GT ./. +NC_002945.4 2933615 . N . . . . GT ./. +NC_002945.4 2933616 . N . . . . GT ./. +NC_002945.4 2933617 . N . . . . GT ./. +NC_002945.4 2933618 . N . . . . GT ./. +NC_002945.4 2933619 . N . . . . GT ./. +NC_002945.4 2933620 . N . . . . GT ./. +NC_002945.4 2933621 . N . . . . GT ./. +NC_002945.4 2933622 . N . . . . GT ./. +NC_002945.4 2933623 . N . . . . GT ./. +NC_002945.4 2933624 . N . . . . GT ./. +NC_002945.4 2933625 . N . . . . GT ./. +NC_002945.4 2933626 . N . . . . GT ./. +NC_002945.4 2933627 . N . . . . GT ./. +NC_002945.4 2933628 . N . . . . GT ./. +NC_002945.4 2933629 . N . . . . GT ./. +NC_002945.4 2933630 . N . . . . GT ./. +NC_002945.4 2933631 . N . . . . GT ./. +NC_002945.4 2933632 . N . . . . GT ./. +NC_002945.4 2933633 . N . . . . GT ./. +NC_002945.4 2933634 . N . . . . GT ./. +NC_002945.4 2933635 . N . . . . GT ./. +NC_002945.4 2933636 . N . . . . GT ./. +NC_002945.4 2933637 . N . . . . GT ./. +NC_002945.4 2933638 . N . . . . GT ./. +NC_002945.4 2933639 . N . . . . GT ./. +NC_002945.4 2933640 . N . . . . GT ./. +NC_002945.4 2933641 . N . . . . GT ./. +NC_002945.4 2933642 . N . . . . GT ./. +NC_002945.4 2933643 . N . . . . GT ./. +NC_002945.4 2933644 . N . . . . GT ./. +NC_002945.4 2933645 . N . . . . GT ./. +NC_002945.4 2942926 . A G 11364.77 . AC=2;AF=1.00;AN=2;DP=378;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,378:378:99:11393,1127,0 +NC_002945.4 2947196 . G A 7575.77 . AC=2;AF=1.00;AN=2;DP=256;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.59;SOR=1.054 GT:AD:DP:GQ:PL 1/1:0,256:256:99:7604,764,0 +NC_002945.4 2949531 . G A 6339.77 . AC=2;AF=1.00;AN=2;DP=239;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.86;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,236:236:99:6368,694,0 +NC_002945.4 2964207 . T G 8938.77 . AC=2;AF=1.00;AN=2;DP=306;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.21;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,306:306:99:8967,912,0 +NC_002945.4 2984156 . T G 10381.77 . AC=2;AF=1.00;AN=2;DP=346;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.01;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,346:346:99:10410,1030,0 +NC_002945.4 2992612 . T C 7917.77 . AC=2;AF=1.00;AN=2;DP=258;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.05;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,255:255:99:7946,763,0 +NC_002945.4 2997998 . C T 9590.77 . AC=2;AF=1.00;AN=2;DP=318;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.16;SOR=1.161 GT:AD:DP:GQ:PL 1/1:0,318:318:99:9619,950,0 +NC_002945.4 2998136 . A C 70.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-5.020;ClippingRankSum=0.000;DP=259;ExcessHet=3.0103;FS=444.660;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=0.29;ReadPosRankSum=-11.131;SOR=8.553 GT:AD:DP:GQ:PL 0/1:175,71:246:99:99,0,3117 +NC_002945.4 3018593 . G T 7893.77 . AC=2;AF=1.00;AN=2;DP=264;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.01;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,263:263:99:7922,787,0 +NC_002945.4 3036490 . C G 5254.77 . AC=2;AF=1.00;AN=2;DP=165;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.85;SOR=0.834 GT:AD:DP:GQ:PL 1/1:0,165:165:99:5283,495,0 +NC_002945.4 3037620 . C G 7175.77 . AC=2;AF=1.00;AN=2;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.77;SOR=1.063 GT:AD:DP:GQ:PL 1/1:0,219:219:99:7204,655,0 +NC_002945.4 3040820 . A G 6881.77 . AC=2;AF=1.00;AN=2;DP=204;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.73;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,204:204:99:6910,612,0 +NC_002945.4 3042914 . T A 8876.77 . AC=2;AF=1.00;AN=2;DP=307;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.01;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,306:306:99:8905,910,0 +NC_002945.4 3047601 . A C 10229.77 . AC=2;AF=1.00;AN=2;DP=331;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.91;SOR=0.971 GT:AD:DP:GQ:PL 1/1:0,331:331:99:10258,991,0 +NC_002945.4 3053649 . G A 7805.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.166;ClippingRankSum=0.000;DP=280;ExcessHet=3.0103;FS=10.058;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.08;ReadPosRankSum=1.447;SOR=0.377 GT:AD:DP:GQ:PL 1/1:3,275:278:99:7834,791,0 +NC_002945.4 3063074 . A G 9607.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.897;ClippingRankSum=0.000;DP=329;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.20;ReadPosRankSum=-0.757;SOR=0.420 GT:AD:DP:GQ:PL 1/1:1,328:329:99:9636,938,0 +NC_002945.4 3065929 . A C 5091.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.664;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.31;ReadPosRankSum=-0.668;SOR=0.331 GT:AD:DP:GQ:PL 1/1:1,167:168:99:5120,490,0 +NC_002945.4 3068041 . A G 5080.77 . AC=2;AF=1.00;AN=2;DP=172;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.71;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,171:171:99:5109,509,0 +NC_002945.4 3070642 . C T 3071.77 . AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.79;SOR=4.332 GT:AD:DP:GQ:PL 1/1:0,85:85:99:3100,254,0 +NC_002945.4 3080843 . T C 6017.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.408;ClippingRankSum=0.000;DP=232;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.70;MQRankSum=2.869;QD=26.28;ReadPosRankSum=2.094;SOR=0.739 GT:AD:DP:GQ:PL 1/1:8,221:229:99:6046,424,0 +NC_002945.4 3092170 . G A 9169.77 . AC=2;AF=1.00;AN=2;DP=328;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.21;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,325:325:99:9198,966,0 +NC_002945.4 3098932 . T C 5776.77 . AC=2;AF=1.00;AN=2;DP=178;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.45;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,178:178:99:5805,532,0 +NC_002945.4 3100639 . G C 4674.77 . AC=2;AF=1.00;AN=2;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.97;SOR=2.098 GT:AD:DP:GQ:PL 1/1:0,156:156:99:4703,459,0 +NC_002945.4 3103354 . T C 6427.77 . AC=2;AF=1.00;AN=2;DP=203;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.46;SOR=1.746 GT:AD:DP:GQ:PL 1/1:0,198:198:99:6456,591,0 +NC_002945.4 3137471 . A G 7675.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.956;ClippingRankSum=0.000;DP=246;ExcessHet=3.0103;FS=3.136;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.33;ReadPosRankSum=-0.498;SOR=0.329 GT:AD:DP:GQ:PL 1/1:1,244:245:99:7704,723,0 +NC_002945.4 3140342 . G T 8580.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.979;ClippingRankSum=0.000;DP=307;ExcessHet=3.0103;FS=3.067;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.04;ReadPosRankSum=2.826;SOR=0.276 GT:AD:DP:GQ:PL 1/1:1,305:306:99:8609,898,0 +NC_002945.4 3147547 . G A 6453.77 . AC=2;AF=1.00;AN=2;DP=241;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.12;SOR=0.817 GT:AD:DP:GQ:PL 1/1:0,238:238:99:6482,705,0 +NC_002945.4 3154140 . T C 10114.77 . AC=2;AF=1.00;AN=2;DP=332;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.47;SOR=0.847 GT:AD:DP:GQ:PL 1/1:0,332:332:99:10143,990,0 +NC_002945.4 3159182 . G A 7811.77 . AC=2;AF=1.00;AN=2;DP=269;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.04;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,269:269:99:7840,802,0 +NC_002945.4 3173568 . T C 6936.77 . AC=2;AF=1.00;AN=2;DP=202;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=1.052 GT:AD:DP:GQ:PL 1/1:0,199:199:99:6965,597,0 +NC_002945.4 3203316 . T C 10420.77 . AC=2;AF=1.00;AN=2;DP=357;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.27;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,356:356:99:10449,1060,0 +NC_002945.4 3209298 . N . . . . GT ./. +NC_002945.4 3209299 . N . . . . GT ./. +NC_002945.4 3209300 . N . . . . GT ./. +NC_002945.4 3209301 . N . . . . GT ./. +NC_002945.4 3211854 . T C 6907.77 . AC=2;AF=1.00;AN=2;DP=236;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.27;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,236:236:99:6936,702,0 +NC_002945.4 3219356 . N . . . . GT ./. +NC_002945.4 3219357 . N . . . . GT ./. +NC_002945.4 3225166 . T G 94.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-5.377;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=228.442;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=0.53;ReadPosRankSum=3.077;SOR=7.903 GT:AD:DP:GQ:PL 0/1:129,51:180:99:123,0,2817 +NC_002945.4 3230333 . G A 5302.77 . AC=2;AF=1.00;AN=2;DP=191;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.76;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,191:191:99:5331,567,0 +NC_002945.4 3247623 . C T 6755.77 . AC=2;AF=1.00;AN=2;DP=234;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.25;SOR=1.234 GT:AD:DP:GQ:PL 1/1:0,231:231:99:6784,687,0 +NC_002945.4 3261792 . A G 12178.77 . AC=2;AF=1.00;AN=2;DP=434;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.13;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,433:433:99:12207,1290,0 +NC_002945.4 3267690 . A G 8125.77 . AC=2;AF=1.00;AN=2;DP=253;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.12;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,253:253:99:8154,753,0 +NC_002945.4 3270181 . A G 9105.77 . AC=2;AF=1.00;AN=2;DP=309;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.56;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,308:308:99:9134,919,0 +NC_002945.4 3282696 . G A 9245.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.564;ClippingRankSum=0.000;DP=339;ExcessHet=3.0103;FS=3.103;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.77;ReadPosRankSum=-0.405;SOR=0.301 GT:AD:DP:GQ:PL 1/1:1,332:333:99:9274,974,0 +NC_002945.4 3297745 . A T 938.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=4.263;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=22.822;MLEAC=1;MLEAF=0.500;MQ=56.99;MQRankSum=-3.428;QD=8.23;ReadPosRankSum=-4.337;SOR=0.047 GT:AD:DP:GQ:PL 0/1:71,43:114:99:967,0,2866 +NC_002945.4 3329772 . C G 7731.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.925;ClippingRankSum=0.000;DP=257;ExcessHet=3.0103;FS=3.096;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.32;ReadPosRankSum=-0.608;SOR=0.299 GT:AD:DP:GQ:PL 1/1:1,254:255:99:7760,750,0 +NC_002945.4 3338298 . C G 3356.77 . AC=2;AF=1.00;AN=2;DP=126;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.78;QD=27.07;SOR=1.197 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3385,368,0 +NC_002945.4 3371156 . A G 9051.77 . AC=2;AF=1.00;AN=2;DP=291;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.11;SOR=0.847 GT:AD:DP:GQ:PL 1/1:0,291:291:99:9080,866,0 +NC_002945.4 3394764 . A G 9595.77 . AC=2;AF=1.00;AN=2;DP=330;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.26;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,328:328:99:9624,976,0 +NC_002945.4 3396621 . G C 8668.77 . AC=2;AF=1.00;AN=2;DP=286;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.31;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,286:286:99:8697,854,0 +NC_002945.4 3399294 . G T 8108.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.840;ClippingRankSum=0.000;DP=272;ExcessHet=3.0103;FS=3.059;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.92;ReadPosRankSum=2.415;SOR=0.270 GT:AD:DP:GQ:PL 1/1:1,270:271:99:8137,795,0 +NC_002945.4 3421983 . C T 5464.77 . AC=2;AF=1.00;AN=2;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.12;SOR=2.069 GT:AD:DP:GQ:PL 1/1:0,165:165:99:5493,493,0 +NC_002945.4 3428078 . C T 5462.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=4.079;ClippingRankSum=0.000;DP=218;ExcessHet=3.0103;FS=26.289;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=25.41;ReadPosRankSum=3.211;SOR=1.197 GT:AD:DP:GQ:PL 1/1:6,209:215:99:5491,562,0 +NC_002945.4 3429376 . A C 5595.77 . AC=2;AF=1.00;AN=2;DP=165;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.33;SOR=1.698 GT:AD:DP:GQ:PL 1/1:0,163:163:99:5624,488,0 +NC_002945.4 3439578 . G A 10250.77 . AC=2;AF=1.00;AN=2;DP=359;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.88;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,355:355:99:10279,1056,0 +NC_002945.4 3450988 . C T 9125.77 . AC=2;AF=1.00;AN=2;DP=307;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.92;SOR=1.156 GT:AD:DP:GQ:PL 1/1:0,305:305:99:9154,907,0 +NC_002945.4 3451869 . C A 8997.77 . AC=2;AF=1.00;AN=2;DP=317;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.66;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,314:314:99:9026,929,0 +NC_002945.4 3464524 . T C 5370.77 . AC=2;AF=1.00;AN=2;DP=139;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.51;SOR=5.361 GT:AD:DP:GQ:PL 1/1:0,138:138:99:5399,414,0 +NC_002945.4 3471404 . A G 11021.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.621;ClippingRankSum=0.000;DP=358;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.13;ReadPosRankSum=-0.717;SOR=1.272 GT:AD:DP:GQ:PL 1/1:2,352:354:99:11050,1033,0 +NC_002945.4 3482644 . A T 6350.77 . AC=2;AF=1.00;AN=2;DP=220;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.27;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,217:217:99:6379,644,0 +NC_002945.4 3484836 . A G 9592.77 . AC=2;AF=1.00;AN=2;DP=328;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.94;QD=29.43;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,326:326:99:9621,971,0 +NC_002945.4 3495510 . C T 7253.77 . AC=2;AF=1.00;AN=2;DP=255;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.13;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,249:249:99:7282,738,0 +NC_002945.4 3521264 . C T 8800.77 . AC=2;AF=1.00;AN=2;DP=309;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.57;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,308:308:99:8829,919,0 +NC_002945.4 3558883 . G C 7931.77 . AC=2;AF=1.00;AN=2;DP=240;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.61;SOR=2.282 GT:AD:DP:GQ:PL 1/1:0,236:236:99:7960,702,0 +NC_002945.4 3574014 . T C 9000.77 . AC=2;AF=1.00;AN=2;DP=290;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.14;SOR=1.227 GT:AD:DP:GQ:PL 1/1:0,289:289:99:9029,862,0 +NC_002945.4 3577163 . G T 9642.77 . AC=2;AF=1.00;AN=2;DP=300;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.25;SOR=1.130 GT:AD:DP:GQ:PL 1/1:0,299:299:99:9671,893,0 +NC_002945.4 3626128 . T C 7529.77 . AC=2;AF=1.00;AN=2;DP=239;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.51;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,239:239:99:7558,715,0 +NC_002945.4 3629370 . G A 8131.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.877;ClippingRankSum=0.000;DP=278;ExcessHet=3.0103;FS=3.268;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.25;ReadPosRankSum=2.075;SOR=0.423 GT:AD:DP:GQ:PL 1/1:1,277:278:99:8160,818,0 +NC_002945.4 3667823 . A G 10431.77 . AC=2;AF=1.00;AN=2;DP=336;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.03;QD=31.05;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,336:336:99:10460,1004,0 +NC_002945.4 3695728 . N . . . . GT ./. +NC_002945.4 3695729 . N . . . . GT ./. +NC_002945.4 3695730 . N . . . . GT ./. +NC_002945.4 3695731 . N . . . . GT ./. +NC_002945.4 3695732 . N . . . . GT ./. +NC_002945.4 3695733 . N . . . . GT ./. +NC_002945.4 3695734 . N . . . . GT ./. +NC_002945.4 3695735 . N . . . . GT ./. +NC_002945.4 3695736 . N . . . . GT ./. +NC_002945.4 3695737 . N . . . . GT ./. +NC_002945.4 3695738 . N . . . . GT ./. +NC_002945.4 3695739 . N . . . . GT ./. +NC_002945.4 3695740 . N . . . . GT ./. +NC_002945.4 3695741 . N . . . . GT ./. +NC_002945.4 3695742 . N . . . . GT ./. +NC_002945.4 3695743 . N . . . . GT ./. +NC_002945.4 3695744 . N . . . . GT ./. +NC_002945.4 3695745 . N . . . . GT ./. +NC_002945.4 3695746 . N . . . . GT ./. +NC_002945.4 3695747 . N . . . . GT ./. +NC_002945.4 3695748 . N . . . . GT ./. +NC_002945.4 3695749 . N . . . . GT ./. +NC_002945.4 3695750 . N . . . . GT ./. +NC_002945.4 3695751 . N . . . . GT ./. +NC_002945.4 3695752 . N . . . . GT ./. +NC_002945.4 3695753 . N . . . . GT ./. +NC_002945.4 3695754 . N . . . . GT ./. +NC_002945.4 3695755 . N . . . . GT ./. +NC_002945.4 3695756 . N . . . . GT ./. +NC_002945.4 3695757 . N . . . . GT ./. +NC_002945.4 3695758 . N . . . . GT ./. +NC_002945.4 3695759 . N . . . . GT ./. +NC_002945.4 3695760 . N . . . . GT ./. +NC_002945.4 3695761 . N . . . . GT ./. +NC_002945.4 3695762 . N . . . . GT ./. +NC_002945.4 3695763 . N . . . . GT ./. +NC_002945.4 3695764 . N . . . . GT ./. +NC_002945.4 3695765 . N . . . . GT ./. +NC_002945.4 3695766 . N . . . . GT ./. +NC_002945.4 3695767 . N . . . . GT ./. +NC_002945.4 3695768 . N . . . . GT ./. +NC_002945.4 3695769 . N . . . . GT ./. +NC_002945.4 3695770 . N . . . . GT ./. +NC_002945.4 3695771 . N . . . . GT ./. +NC_002945.4 3695772 . N . . . . GT ./. +NC_002945.4 3695773 . N . . . . GT ./. +NC_002945.4 3695774 . N . . . . GT ./. +NC_002945.4 3695775 . N . . . . GT ./. +NC_002945.4 3695776 . N . . . . GT ./. +NC_002945.4 3695777 . N . . . . GT ./. +NC_002945.4 3695778 . N . . . . GT ./. +NC_002945.4 3695779 . N . . . . GT ./. +NC_002945.4 3695780 . N . . . . GT ./. +NC_002945.4 3695781 . N . . . . GT ./. +NC_002945.4 3695782 . N . . . . GT ./. +NC_002945.4 3695783 . N . . . . GT ./. +NC_002945.4 3695784 . N . . . . GT ./. +NC_002945.4 3695785 . N . . . . GT ./. +NC_002945.4 3695786 . N . . . . GT ./. +NC_002945.4 3695787 . N . . . . GT ./. +NC_002945.4 3695788 . N . . . . GT ./. +NC_002945.4 3695789 . N . . . . GT ./. +NC_002945.4 3695790 . N . . . . GT ./. +NC_002945.4 3695791 . N . . . . GT ./. +NC_002945.4 3695812 . N . . . . GT ./. +NC_002945.4 3695813 . N . . . . GT ./. +NC_002945.4 3695814 . N . . . . GT ./. +NC_002945.4 3695815 . N . . . . GT ./. +NC_002945.4 3695816 . N . . . . GT ./. +NC_002945.4 3695817 . N . . . . GT ./. +NC_002945.4 3695818 . N . . . . GT ./. +NC_002945.4 3695819 . N . . . . GT ./. +NC_002945.4 3695820 . N . . . . GT ./. +NC_002945.4 3695821 . N . . . . GT ./. +NC_002945.4 3695822 . N . . . . GT ./. +NC_002945.4 3695823 . N . . . . GT ./. +NC_002945.4 3695824 . N . . . . GT ./. +NC_002945.4 3695825 . N . . . . GT ./. +NC_002945.4 3695826 . N . . . . GT ./. +NC_002945.4 3695827 . N . . . . GT ./. +NC_002945.4 3695828 . N . . . . GT ./. +NC_002945.4 3695829 . N . . . . GT ./. +NC_002945.4 3695830 . N . . . . GT ./. +NC_002945.4 3695831 . N . . . . GT ./. +NC_002945.4 3695832 . N . . . . GT ./. +NC_002945.4 3695833 . N . . . . GT ./. +NC_002945.4 3695834 . N . . . . GT ./. +NC_002945.4 3695835 . N . . . . GT ./. +NC_002945.4 3695836 . N . . . . GT ./. +NC_002945.4 3695837 . N . . . . GT ./. +NC_002945.4 3695838 . N . . . . GT ./. +NC_002945.4 3695839 . N . . . . GT ./. +NC_002945.4 3695840 . N . . . . GT ./. +NC_002945.4 3695841 . N . . . . GT ./. +NC_002945.4 3695842 . N . . . . GT ./. +NC_002945.4 3695843 . N . . . . GT ./. +NC_002945.4 3695844 . N . . . . GT ./. +NC_002945.4 3695845 . N . . . . GT ./. +NC_002945.4 3695846 . N . . . . GT ./. +NC_002945.4 3695847 . N . . . . GT ./. +NC_002945.4 3695848 . N . . . . GT ./. +NC_002945.4 3695849 . N . . . . GT ./. +NC_002945.4 3695850 . N . . . . GT ./. +NC_002945.4 3695851 . N . . . . GT ./. +NC_002945.4 3695852 . N . . . . GT ./. +NC_002945.4 3695853 . N . . . . GT ./. +NC_002945.4 3695854 . N . . . . GT ./. +NC_002945.4 3695855 . N . . . . GT ./. +NC_002945.4 3695856 . N . . . . GT ./. +NC_002945.4 3695857 . N . . . . GT ./. +NC_002945.4 3695858 . N . . . . GT ./. +NC_002945.4 3695859 . N . . . . GT ./. +NC_002945.4 3695860 . N . . . . GT ./. +NC_002945.4 3695861 . N . . . . GT ./. +NC_002945.4 3695862 . N . . . . GT ./. +NC_002945.4 3695863 . N . . . . GT ./. +NC_002945.4 3695864 . N . . . . GT ./. +NC_002945.4 3695865 . N . . . . GT ./. +NC_002945.4 3695866 . N . . . . GT ./. +NC_002945.4 3695867 . N . . . . GT ./. +NC_002945.4 3695868 . N . . . . GT ./. +NC_002945.4 3695869 . N . . . . GT ./. +NC_002945.4 3695870 . N . . . . GT ./. +NC_002945.4 3695871 . N . . . . GT ./. +NC_002945.4 3695872 . N . . . . GT ./. +NC_002945.4 3695873 . N . . . . GT ./. +NC_002945.4 3695874 . N . . . . GT ./. +NC_002945.4 3695875 . N . . . . GT ./. +NC_002945.4 3695876 . N . . . . GT ./. +NC_002945.4 3695877 . N . . . . GT ./. +NC_002945.4 3695878 . N . . . . GT ./. +NC_002945.4 3695879 . N . . . . GT ./. +NC_002945.4 3695880 . N . . . . GT ./. +NC_002945.4 3695881 . N . . . . GT ./. +NC_002945.4 3695882 . N . . . . GT ./. +NC_002945.4 3695883 . N . . . . GT ./. +NC_002945.4 3695884 . N . . . . GT ./. +NC_002945.4 3695885 . N . . . . GT ./. +NC_002945.4 3695886 . N . . . . GT ./. +NC_002945.4 3695887 . N . . . . GT ./. +NC_002945.4 3695888 . N . . . . GT ./. +NC_002945.4 3695889 . N . . . . GT ./. +NC_002945.4 3695890 . N . . . . GT ./. +NC_002945.4 3695891 . N . . . . GT ./. +NC_002945.4 3695892 . N . . . . GT ./. +NC_002945.4 3695893 . N . . . . GT ./. +NC_002945.4 3695894 . N . . . . GT ./. +NC_002945.4 3695895 . N . . . . GT ./. +NC_002945.4 3695896 . N . . . . GT ./. +NC_002945.4 3695897 . N . . . . GT ./. +NC_002945.4 3695898 . N . . . . GT ./. +NC_002945.4 3695899 . N . . . . GT ./. +NC_002945.4 3695900 . N . . . . GT ./. +NC_002945.4 3695901 . N . . . . GT ./. +NC_002945.4 3695902 . N . . . . GT ./. +NC_002945.4 3695903 . N . . . . GT ./. +NC_002945.4 3695904 . N . . . . GT ./. +NC_002945.4 3695905 . N . . . . GT ./. +NC_002945.4 3695906 . N . . . . GT ./. +NC_002945.4 3695907 . N . . . . GT ./. +NC_002945.4 3695908 . N . . . . GT ./. +NC_002945.4 3695909 . N . . . . GT ./. +NC_002945.4 3695910 . N . . . . GT ./. +NC_002945.4 3695911 . N . . . . GT ./. +NC_002945.4 3695912 . N . . . . GT ./. +NC_002945.4 3695913 . N . . . . GT ./. +NC_002945.4 3695914 . N . . . . GT ./. +NC_002945.4 3695915 . N . . . . GT ./. +NC_002945.4 3695916 . N . . . . GT ./. +NC_002945.4 3695917 . N . . . . GT ./. +NC_002945.4 3695918 . N . . . . GT ./. +NC_002945.4 3695919 . N . . . . GT ./. +NC_002945.4 3695920 . N . . . . GT ./. +NC_002945.4 3695921 . N . . . . GT ./. +NC_002945.4 3695922 . N . . . . GT ./. +NC_002945.4 3695923 . N . . . . GT ./. +NC_002945.4 3695924 . N . . . . GT ./. +NC_002945.4 3695925 . N . . . . GT ./. +NC_002945.4 3695926 . N . . . . GT ./. +NC_002945.4 3695927 . N . . . . GT ./. +NC_002945.4 3695928 . N . . . . GT ./. +NC_002945.4 3695929 . N . . . . GT ./. +NC_002945.4 3695930 . N . . . . GT ./. +NC_002945.4 3695931 . N . . . . GT ./. +NC_002945.4 3695932 . N . . . . GT ./. +NC_002945.4 3695933 . N . . . . GT ./. +NC_002945.4 3695934 . N . . . . GT ./. +NC_002945.4 3695935 . N . . . . GT ./. +NC_002945.4 3695936 . N . . . . GT ./. +NC_002945.4 3695937 . N . . . . GT ./. +NC_002945.4 3695938 . N . . . . GT ./. +NC_002945.4 3695939 . N . . . . GT ./. +NC_002945.4 3695940 . N . . . . GT ./. +NC_002945.4 3695941 . N . . . . GT ./. +NC_002945.4 3695942 . N . . . . GT ./. +NC_002945.4 3695943 . N . . . . GT ./. +NC_002945.4 3695944 . N . . . . GT ./. +NC_002945.4 3695945 . N . . . . GT ./. +NC_002945.4 3695946 . N . . . . GT ./. +NC_002945.4 3695947 . N . . . . GT ./. +NC_002945.4 3695948 . N . . . . GT ./. +NC_002945.4 3695949 . N . . . . GT ./. +NC_002945.4 3695950 . N . . . . GT ./. +NC_002945.4 3695951 . N . . . . GT ./. +NC_002945.4 3695952 . N . . . . GT ./. +NC_002945.4 3695953 . N . . . . GT ./. +NC_002945.4 3695954 . N . . . . GT ./. +NC_002945.4 3695955 . N . . . . GT ./. +NC_002945.4 3695956 . N . . . . GT ./. +NC_002945.4 3695957 . N . . . . GT ./. +NC_002945.4 3695958 . N . . . . GT ./. +NC_002945.4 3695959 . N . . . . GT ./. +NC_002945.4 3695960 . N . . . . GT ./. +NC_002945.4 3695961 . N . . . . GT ./. +NC_002945.4 3695962 . N . . . . GT ./. +NC_002945.4 3695963 . N . . . . GT ./. +NC_002945.4 3695964 . N . . . . GT ./. +NC_002945.4 3695965 . N . . . . GT ./. +NC_002945.4 3695966 . N . . . . GT ./. +NC_002945.4 3695967 . N . . . . GT ./. +NC_002945.4 3695968 . N . . . . GT ./. +NC_002945.4 3695969 . N . . . . GT ./. +NC_002945.4 3695970 . N . . . . GT ./. +NC_002945.4 3695971 . N . . . . GT ./. +NC_002945.4 3695972 . N . . . . GT ./. +NC_002945.4 3695973 . N . . . . GT ./. +NC_002945.4 3695974 . N . . . . GT ./. +NC_002945.4 3695975 . N . . . . GT ./. +NC_002945.4 3695976 . N . . . . GT ./. +NC_002945.4 3695977 . N . . . . GT ./. +NC_002945.4 3695978 . N . . . . GT ./. +NC_002945.4 3695979 . N . . . . GT ./. +NC_002945.4 3695980 . N . . . . GT ./. +NC_002945.4 3695981 . N . . . . GT ./. +NC_002945.4 3695982 . N . . . . GT ./. +NC_002945.4 3695983 . N . . . . GT ./. +NC_002945.4 3695984 . N . . . . GT ./. +NC_002945.4 3695985 . N . . . . GT ./. +NC_002945.4 3695986 . N . . . . GT ./. +NC_002945.4 3695987 . N . . . . GT ./. +NC_002945.4 3695988 . N . . . . GT ./. +NC_002945.4 3695989 . N . . . . GT ./. +NC_002945.4 3695990 . N . . . . GT ./. +NC_002945.4 3695991 . N . . . . GT ./. +NC_002945.4 3695992 . N . . . . GT ./. +NC_002945.4 3695993 . N . . . . GT ./. +NC_002945.4 3695994 . N . . . . GT ./. +NC_002945.4 3695995 . N . . . . GT ./. +NC_002945.4 3695996 . N . . . . GT ./. +NC_002945.4 3695997 . N . . . . GT ./. +NC_002945.4 3695998 . N . . . . GT ./. +NC_002945.4 3695999 . N . . . . GT ./. +NC_002945.4 3696000 . N . . . . GT ./. +NC_002945.4 3696001 . N . . . . GT ./. +NC_002945.4 3696002 . N . . . . GT ./. +NC_002945.4 3696003 . N . . . . GT ./. +NC_002945.4 3696004 . N . . . . GT ./. +NC_002945.4 3696005 . N . . . . GT ./. +NC_002945.4 3696006 . N . . . . GT ./. +NC_002945.4 3696007 . N . . . . GT ./. +NC_002945.4 3696008 . N . . . . GT ./. +NC_002945.4 3696009 . N . . . . GT ./. +NC_002945.4 3696010 . N . . . . GT ./. +NC_002945.4 3696011 . N . . . . GT ./. +NC_002945.4 3696012 . N . . . . GT ./. +NC_002945.4 3696013 . N . . . . GT ./. +NC_002945.4 3696014 . N . . . . GT ./. +NC_002945.4 3696015 . N . . . . GT ./. +NC_002945.4 3696016 . N . . . . GT ./. +NC_002945.4 3696017 . N . . . . GT ./. +NC_002945.4 3696018 . N . . . . GT ./. +NC_002945.4 3696019 . N . . . . GT ./. +NC_002945.4 3696020 . N . . . . GT ./. +NC_002945.4 3696021 . N . . . . GT ./. +NC_002945.4 3696022 . N . . . . GT ./. +NC_002945.4 3696023 . N . . . . GT ./. +NC_002945.4 3696024 . N . . . . GT ./. +NC_002945.4 3696025 . N . . . . GT ./. +NC_002945.4 3696026 . N . . . . GT ./. +NC_002945.4 3696027 . N . . . . GT ./. +NC_002945.4 3696028 . N . . . . GT ./. +NC_002945.4 3696029 . N . . . . GT ./. +NC_002945.4 3696030 . N . . . . GT ./. +NC_002945.4 3696031 . N . . . . GT ./. +NC_002945.4 3696032 . N . . . . GT ./. +NC_002945.4 3696033 . N . . . . GT ./. +NC_002945.4 3696034 . N . . . . GT ./. +NC_002945.4 3696035 . N . . . . GT ./. +NC_002945.4 3696036 . N . . . . GT ./. +NC_002945.4 3696037 . N . . . . GT ./. +NC_002945.4 3696038 . N . . . . GT ./. +NC_002945.4 3696039 . N . . . . GT ./. +NC_002945.4 3696040 . N . . . . GT ./. +NC_002945.4 3696041 . N . . . . GT ./. +NC_002945.4 3696042 . N . . . . GT ./. +NC_002945.4 3696043 . N . . . . GT ./. +NC_002945.4 3696044 . N . . . . GT ./. +NC_002945.4 3696045 . N . . . . GT ./. +NC_002945.4 3696046 . N . . . . GT ./. +NC_002945.4 3696047 . N . . . . GT ./. +NC_002945.4 3696048 . N . . . . GT ./. +NC_002945.4 3696049 . N . . . . GT ./. +NC_002945.4 3696050 . N . . . . GT ./. +NC_002945.4 3696051 . N . . . . GT ./. +NC_002945.4 3696052 . N . . . . GT ./. +NC_002945.4 3696053 . N . . . . GT ./. +NC_002945.4 3696054 . N . . . . GT ./. +NC_002945.4 3696055 . N . . . . GT ./. +NC_002945.4 3696056 . N . . . . GT ./. +NC_002945.4 3696057 . N . . . . GT ./. +NC_002945.4 3696058 . N . . . . GT ./. +NC_002945.4 3696059 . N . . . . GT ./. +NC_002945.4 3696060 . N . . . . GT ./. +NC_002945.4 3696061 . N . . . . GT ./. +NC_002945.4 3696062 . N . . . . GT ./. +NC_002945.4 3696063 . N . . . . GT ./. +NC_002945.4 3696064 . N . . . . GT ./. +NC_002945.4 3696065 . N . . . . GT ./. +NC_002945.4 3696066 . N . . . . GT ./. +NC_002945.4 3696067 . N . . . . GT ./. +NC_002945.4 3696068 . N . . . . GT ./. +NC_002945.4 3696069 . N . . . . GT ./. +NC_002945.4 3696070 . N . . . . GT ./. +NC_002945.4 3696071 . N . . . . GT ./. +NC_002945.4 3696072 . N . . . . GT ./. +NC_002945.4 3696073 . N . . . . GT ./. +NC_002945.4 3696074 . N . . . . GT ./. +NC_002945.4 3696075 . N . . . . GT ./. +NC_002945.4 3696076 . N . . . . GT ./. +NC_002945.4 3696077 . N . . . . GT ./. +NC_002945.4 3696078 . N . . . . GT ./. +NC_002945.4 3696079 . N . . . . GT ./. +NC_002945.4 3696080 . N . . . . GT ./. +NC_002945.4 3696081 . N . . . . GT ./. +NC_002945.4 3696082 . N . . . . GT ./. +NC_002945.4 3696083 . N . . . . GT ./. +NC_002945.4 3696084 . N . . . . GT ./. +NC_002945.4 3696085 . N . . . . GT ./. +NC_002945.4 3696086 . N . . . . GT ./. +NC_002945.4 3696087 . N . . . . GT ./. +NC_002945.4 3696088 . N . . . . GT ./. +NC_002945.4 3696089 . N . . . . GT ./. +NC_002945.4 3696090 . N . . . . GT ./. +NC_002945.4 3696091 . N . . . . GT ./. +NC_002945.4 3696092 . N . . . . GT ./. +NC_002945.4 3696093 . N . . . . GT ./. +NC_002945.4 3696094 . N . . . . GT ./. +NC_002945.4 3696095 . N . . . . GT ./. +NC_002945.4 3696096 . N . . . . GT ./. +NC_002945.4 3696097 . N . . . . GT ./. +NC_002945.4 3696098 . N . . . . GT ./. +NC_002945.4 3696099 . N . . . . GT ./. +NC_002945.4 3696100 . N . . . . GT ./. +NC_002945.4 3696101 . N . . . . GT ./. +NC_002945.4 3696102 . N . . . . GT ./. +NC_002945.4 3696103 . N . . . . GT ./. +NC_002945.4 3696104 . N . . . . GT ./. +NC_002945.4 3696105 . N . . . . GT ./. +NC_002945.4 3696106 . N . . . . GT ./. +NC_002945.4 3696107 . N . . . . GT ./. +NC_002945.4 3696108 . N . . . . GT ./. +NC_002945.4 3696109 . N . . . . GT ./. +NC_002945.4 3696110 . N . . . . GT ./. +NC_002945.4 3696111 . N . . . . GT ./. +NC_002945.4 3696112 . N . . . . GT ./. +NC_002945.4 3696113 . N . . . . GT ./. +NC_002945.4 3696114 . N . . . . GT ./. +NC_002945.4 3696115 . N . . . . GT ./. +NC_002945.4 3696116 . N . . . . GT ./. +NC_002945.4 3696117 . N . . . . GT ./. +NC_002945.4 3696118 . N . . . . GT ./. +NC_002945.4 3696119 . N . . . . GT ./. +NC_002945.4 3696120 . N . . . . GT ./. +NC_002945.4 3696121 . N . . . . GT ./. +NC_002945.4 3696122 . N . . . . GT ./. +NC_002945.4 3696123 . N . . . . GT ./. +NC_002945.4 3696124 . N . . . . GT ./. +NC_002945.4 3696125 . N . . . . GT ./. +NC_002945.4 3696126 . N . . . . GT ./. +NC_002945.4 3696127 . N . . . . GT ./. +NC_002945.4 3696128 . N . . . . GT ./. +NC_002945.4 3696129 . N . . . . GT ./. +NC_002945.4 3696130 . N . . . . GT ./. +NC_002945.4 3696131 . N . . . . GT ./. +NC_002945.4 3696132 . N . . . . GT ./. +NC_002945.4 3696133 . N . . . . GT ./. +NC_002945.4 3696134 . N . . . . GT ./. +NC_002945.4 3696135 . N . . . . GT ./. +NC_002945.4 3696145 . G T 760.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.551;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.43;ReadPosRankSum=2.484;SOR=1.329 GT:AD:DP:GQ:PL 1/1:1,24:25:35:789,35,0 +NC_002945.4 3719802 . A G 9597.77 . AC=2;AF=1.00;AN=2;DP=322;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.90;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,321:321:99:9626,957,0 +NC_002945.4 3723554 . C G 8935.77 . AC=2;AF=1.00;AN=2;DP=295;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.29;SOR=0.924 GT:AD:DP:GQ:PL 1/1:0,295:295:99:8964,880,0 +NC_002945.4 3725203 . G A 5796.77 . AC=2;AF=1.00;AN=2;DP=209;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.00;SOR=1.340 GT:AD:DP:GQ:PL 1/1:0,207:207:99:5825,615,0 +NC_002945.4 3729351 . G T 6787.77 . AC=2;AF=1.00;AN=2;DP=234;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,234:234:99:6816,698,0 +NC_002945.4 3748712 . C T 9633.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.684;ClippingRankSum=0.000;DP=344;ExcessHet=3.0103;FS=3.005;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.17;ReadPosRankSum=-0.738;SOR=0.131 GT:AD:DP:GQ:PL 1/1:2,340:342:99:9662,997,0 +NC_002945.4 3776764 . A G 8489.77 . AC=2;AF=1.00;AN=2;DP=269;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.68;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,268:268:99:8518,798,0 +NC_002945.4 3777253 . G C 2855.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.178;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=9.182;MLEAC=1;MLEAF=0.500;MQ=51.39;MQRankSum=0.710;QD=27.53;ReadPosRankSum=1.695;SOR=1.373 GT:AD:DP:GQ:PL 0/1:2,69:71:24:2884,0,24 +NC_002945.4 3777256 . T G 2862.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.255;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=10.233;MLEAC=1;MLEAF=0.500;MQ=50.53;MQRankSum=1.972;QD=22.58;ReadPosRankSum=3.800;SOR=1.370 GT:AD:DP:GQ:PL 0/1:7,71:78:21:2891,0,21 +NC_002945.4 3778473 . A G 7425.77 . AC=2;AF=1.00;AN=2;DP=237;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=1.184 GT:AD:DP:GQ:PL 1/1:0,236:236:99:7454,703,0 +NC_002945.4 3805467 . T C 9167.77 . AC=2;AF=1.00;AN=2;DP=311;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.48;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,311:311:99:9196,926,0 +NC_002945.4 3816878 . T C 8032.77 . AC=2;AF=1.00;AN=2;DP=263;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.66;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,262:262:99:8061,783,0 +NC_002945.4 3836507 . T C 182.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.357;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=33.74;MQRankSum=-4.196;QD=9.62;ReadPosRankSum=-0.077;SOR=0.602 GT:AD:DP:GQ:PL 0/1:10,9:19:99:211,0,314 +NC_002945.4 3839650 . T C 8451.77 . AC=2;AF=1.00;AN=2;DP=266;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.77;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,266:266:99:8480,795,0 +NC_002945.4 3849304 . G A 7782.77 . AC=2;AF=1.00;AN=2;DP=267;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.37;SOR=1.286 GT:AD:DP:GQ:PL 1/1:0,265:265:99:7811,787,0 +NC_002945.4 3853789 . G A 3548.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.393;ClippingRankSum=0.000;DP=173;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.51;ReadPosRankSum=1.471;SOR=0.803 GT:AD:DP:GQ:PL 0/1:23,150:173:99:3577,0,155 +NC_002945.4 3872780 . T C 8193.77 . AC=2;AF=1.00;AN=2;DP=284;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.85;SOR=0.875 GT:AD:DP:GQ:PL 1/1:0,284:284:99:8222,842,0 +NC_002945.4 3878214 . G C 54.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.074;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.363;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.91;ReadPosRankSum=-1.641;SOR=1.609 GT:AD:DP:GQ:PL 0/1:10,4:14:83:83,0,272 +NC_002945.4 3878307 . G C 1025.77 . AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.36;QD=26.99;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1054,111,0 +NC_002945.4 3881590 . N . . . . GT ./. +NC_002945.4 3881591 . N . . . . GT ./. +NC_002945.4 3881592 . N . . . . GT ./. +NC_002945.4 3881593 . N . . . . GT ./. +NC_002945.4 3881594 . N . . . . GT ./. +NC_002945.4 3881595 . N . . . . GT ./. +NC_002945.4 3881596 . N . . . . GT ./. +NC_002945.4 3881597 . N . . . . GT ./. +NC_002945.4 3881598 . N . . . . GT ./. +NC_002945.4 3881599 . N . . . . GT ./. +NC_002945.4 3881600 . N . . . . GT ./. +NC_002945.4 3881601 . N . . . . GT ./. +NC_002945.4 3881602 . N . . . . GT ./. +NC_002945.4 3881603 . N . . . . GT ./. +NC_002945.4 3881604 . N . . . . GT ./. +NC_002945.4 3881605 . N . . . . GT ./. +NC_002945.4 3881606 . N . . . . GT ./. +NC_002945.4 3881607 . N . . . . GT ./. +NC_002945.4 3881608 . N . . . . GT ./. +NC_002945.4 3881609 . N . . . . GT ./. +NC_002945.4 3881610 . N . . . . GT ./. +NC_002945.4 3881611 . N . . . . GT ./. +NC_002945.4 3881612 . N . . . . GT ./. +NC_002945.4 3881613 . N . . . . GT ./. +NC_002945.4 3881614 . N . . . . GT ./. +NC_002945.4 3881615 . N . . . . GT ./. +NC_002945.4 3881616 . N . . . . GT ./. +NC_002945.4 3881617 . N . . . . GT ./. +NC_002945.4 3881618 . N . . . . GT ./. +NC_002945.4 3881619 . N . . . . GT ./. +NC_002945.4 3881620 . N . . . . GT ./. +NC_002945.4 3881621 . N . . . . GT ./. +NC_002945.4 3881622 . N . . . . GT ./. +NC_002945.4 3881623 . N . . . . GT ./. +NC_002945.4 3881624 . N . . . . GT ./. +NC_002945.4 3881625 . N . . . . GT ./. +NC_002945.4 3881626 . N . . . . GT ./. +NC_002945.4 3881627 . N . . . . GT ./. +NC_002945.4 3881628 . N . . . . GT ./. +NC_002945.4 3881629 . N . . . . GT ./. +NC_002945.4 3881630 . N . . . . GT ./. +NC_002945.4 3881631 . N . . . . GT ./. +NC_002945.4 3881632 . N . . . . GT ./. +NC_002945.4 3881633 . N . . . . GT ./. +NC_002945.4 3881634 . N . . . . GT ./. +NC_002945.4 3881635 . N . . . . GT ./. +NC_002945.4 3881636 . N . . . . GT ./. +NC_002945.4 3881637 . N . . . . GT ./. +NC_002945.4 3881638 . N . . . . GT ./. +NC_002945.4 3881639 . N . . . . GT ./. +NC_002945.4 3881640 . N . . . . GT ./. +NC_002945.4 3881641 . N . . . . GT ./. +NC_002945.4 3881642 . N . . . . GT ./. +NC_002945.4 3881643 . N . . . . GT ./. +NC_002945.4 3881644 . N . . . . GT ./. +NC_002945.4 3881645 . N . . . . GT ./. +NC_002945.4 3881646 . N . . . . GT ./. +NC_002945.4 3881647 . N . . . . GT ./. +NC_002945.4 3881648 . N . . . . GT ./. +NC_002945.4 3881649 . N . . . . GT ./. +NC_002945.4 3881650 . N . . . . GT ./. +NC_002945.4 3881651 . N . . . . GT ./. +NC_002945.4 3881652 . N . . . . GT ./. +NC_002945.4 3881653 . N . . . . GT ./. +NC_002945.4 3881654 . N . . . . GT ./. +NC_002945.4 3881655 . N . . . . GT ./. +NC_002945.4 3881656 . N . . . . GT ./. +NC_002945.4 3881657 . N . . . . GT ./. +NC_002945.4 3881658 . N . . . . GT ./. +NC_002945.4 3881659 . N . . . . GT ./. +NC_002945.4 3881660 . N . . . . GT ./. +NC_002945.4 3881661 . N . . . . GT ./. +NC_002945.4 3881662 . N . . . . GT ./. +NC_002945.4 3881663 . N . . . . GT ./. +NC_002945.4 3881664 . N . . . . GT ./. +NC_002945.4 3881665 . N . . . . GT ./. +NC_002945.4 3881666 . N . . . . GT ./. +NC_002945.4 3881667 . N . . . . GT ./. +NC_002945.4 3881668 . N . . . . GT ./. +NC_002945.4 3881669 . N . . . . GT ./. +NC_002945.4 3881670 . N . . . . GT ./. +NC_002945.4 3881671 . N . . . . GT ./. +NC_002945.4 3881672 . N . . . . GT ./. +NC_002945.4 3883512 . C T 97.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.050;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=2.411;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.27;ReadPosRankSum=-3.780;SOR=1.688 GT:AD:DP:GQ:PL 0/1:35,8:43:99:126,0,979 +NC_002945.4 3883580 . G A 699.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-3.341;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=11.927;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.66;ReadPosRankSum=-1.501;SOR=0.085 GT:AD:DP:GQ:PL 0/1:32,28:60:99:728,0,1067 +NC_002945.4 3884519 . C T 607.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.553;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.96;ReadPosRankSum=0.053;SOR=0.653 GT:AD:DP:GQ:PL 0/1:34,27:61:99:636,0,819 +NC_002945.4 3890837 . G C 425.77 . AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.22;QD=26.40;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:33:454,33,0 +NC_002945.4 3890839 . C A 425.77 . AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.22;QD=26.29;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:33:454,33,0 +NC_002945.4 3895377 . N . . . . GT ./. +NC_002945.4 3895378 . N . . . . GT ./. +NC_002945.4 3895379 . N . . . . GT ./. +NC_002945.4 3895380 . N . . . . GT ./. +NC_002945.4 3895381 . N . . . . GT ./. +NC_002945.4 3895382 . N . . . . GT ./. +NC_002945.4 3895383 . N . . . . GT ./. +NC_002945.4 3895384 . N . . . . GT ./. +NC_002945.4 3895385 . N . . . . GT ./. +NC_002945.4 3895386 . N . . . . GT ./. +NC_002945.4 3895387 . N . . . . GT ./. +NC_002945.4 3895388 . N . . . . GT ./. +NC_002945.4 3895389 . N . . . . GT ./. +NC_002945.4 3895390 . N . . . . GT ./. +NC_002945.4 3895391 . N . . . . GT ./. +NC_002945.4 3895392 . N . . . . GT ./. +NC_002945.4 3895393 . N . . . . GT ./. +NC_002945.4 3895394 . N . . . . GT ./. +NC_002945.4 3895395 . N . . . . GT ./. +NC_002945.4 3895396 . N . . . . GT ./. +NC_002945.4 3895397 . N . . . . GT ./. +NC_002945.4 3895398 . N . . . . GT ./. +NC_002945.4 3895399 . N . . . . GT ./. +NC_002945.4 3895400 . N . . . . GT ./. +NC_002945.4 3895401 . N . . . . GT ./. +NC_002945.4 3895402 . N . . . . GT ./. +NC_002945.4 3895403 . N . . . . GT ./. +NC_002945.4 3895404 . N . . . . GT ./. +NC_002945.4 3895405 . N . . . . GT ./. +NC_002945.4 3895406 . N . . . . GT ./. +NC_002945.4 3895407 . N . . . . GT ./. +NC_002945.4 3895408 . N . . . . GT ./. +NC_002945.4 3895409 . N . . . . GT ./. +NC_002945.4 3895410 . N . . . . GT ./. +NC_002945.4 3895411 . N . . . . GT ./. +NC_002945.4 3895412 . N . . . . GT ./. +NC_002945.4 3895413 . N . . . . GT ./. +NC_002945.4 3895414 . N . . . . GT ./. +NC_002945.4 3895415 . N . . . . GT ./. +NC_002945.4 3895416 . N . . . . GT ./. +NC_002945.4 3895417 . N . . . . GT ./. +NC_002945.4 3895418 . N . . . . GT ./. +NC_002945.4 3895419 . N . . . . GT ./. +NC_002945.4 3895420 . N . . . . GT ./. +NC_002945.4 3895421 . N . . . . GT ./. +NC_002945.4 3895422 . N . . . . GT ./. +NC_002945.4 3895423 . N . . . . GT ./. +NC_002945.4 3895424 . N . . . . GT ./. +NC_002945.4 3895425 . N . . . . GT ./. +NC_002945.4 3895426 . N . . . . GT ./. +NC_002945.4 3895427 . N . . . . GT ./. +NC_002945.4 3895428 . N . . . . GT ./. +NC_002945.4 3895429 . N . . . . GT ./. +NC_002945.4 3895430 . N . . . . GT ./. +NC_002945.4 3895431 . N . . . . GT ./. +NC_002945.4 3895432 . N . . . . GT ./. +NC_002945.4 3895433 . N . . . . GT ./. +NC_002945.4 3895434 . N . . . . GT ./. +NC_002945.4 3895435 . N . . . . GT ./. +NC_002945.4 3895436 . N . . . . GT ./. +NC_002945.4 3895437 . N . . . . GT ./. +NC_002945.4 3895438 . N . . . . GT ./. +NC_002945.4 3895439 . N . . . . GT ./. +NC_002945.4 3895440 . N . . . . GT ./. +NC_002945.4 3895441 . N . . . . GT ./. +NC_002945.4 3895442 . N . . . . GT ./. +NC_002945.4 3895443 . N . . . . GT ./. +NC_002945.4 3895444 . N . . . . GT ./. +NC_002945.4 3895445 . N . . . . GT ./. +NC_002945.4 3895446 . N . . . . GT ./. +NC_002945.4 3895447 . N . . . . GT ./. +NC_002945.4 3895521 . N . . . . GT ./. +NC_002945.4 3895522 . N . . . . GT ./. +NC_002945.4 3895523 . N . . . . GT ./. +NC_002945.4 3895524 . N . . . . GT ./. +NC_002945.4 3895525 . N . . . . GT ./. +NC_002945.4 3895526 . N . . . . GT ./. +NC_002945.4 3895527 . N . . . . GT ./. +NC_002945.4 3895528 . N . . . . GT ./. +NC_002945.4 3895529 . N . . . . GT ./. +NC_002945.4 3895530 . N . . . . GT ./. +NC_002945.4 3895531 . N . . . . GT ./. +NC_002945.4 3895532 . N . . . . GT ./. +NC_002945.4 3895533 . N . . . . GT ./. +NC_002945.4 3895534 . N . . . . GT ./. +NC_002945.4 3895535 . N . . . . GT ./. +NC_002945.4 3895536 . N . . . . GT ./. +NC_002945.4 3895537 . N . . . . GT ./. +NC_002945.4 3895538 . N . . . . GT ./. +NC_002945.4 3895539 . N . . . . GT ./. +NC_002945.4 3895540 . N . . . . GT ./. +NC_002945.4 3895541 . N . . . . GT ./. +NC_002945.4 3895542 . N . . . . GT ./. +NC_002945.4 3895543 . N . . . . GT ./. +NC_002945.4 3895544 . N . . . . GT ./. +NC_002945.4 3895545 . N . . . . GT ./. +NC_002945.4 3895546 . N . . . . GT ./. +NC_002945.4 3895547 . N . . . . GT ./. +NC_002945.4 3895548 . N . . . . GT ./. +NC_002945.4 3895549 . N . . . . GT ./. +NC_002945.4 3895550 . N . . . . GT ./. +NC_002945.4 3895551 . N . . . . GT ./. +NC_002945.4 3895552 . N . . . . GT ./. +NC_002945.4 3895553 . N . . . . GT ./. +NC_002945.4 3895554 . N . . . . GT ./. +NC_002945.4 3895555 . N . . . . GT ./. +NC_002945.4 3895556 . N . . . . GT ./. +NC_002945.4 3895557 . N . . . . GT ./. +NC_002945.4 3895558 . N . . . . GT ./. +NC_002945.4 3895559 . N . . . . GT ./. +NC_002945.4 3895560 . N . . . . GT ./. +NC_002945.4 3895561 . N . . . . GT ./. +NC_002945.4 3895562 . N . . . . GT ./. +NC_002945.4 3895563 . N . . . . GT ./. +NC_002945.4 3895564 . N . . . . GT ./. +NC_002945.4 3895565 . N . . . . GT ./. +NC_002945.4 3895566 . N . . . . GT ./. +NC_002945.4 3895567 . N . . . . GT ./. +NC_002945.4 3895568 . N . . . . GT ./. +NC_002945.4 3895569 . N . . . . GT ./. +NC_002945.4 3895570 . N . . . . GT ./. +NC_002945.4 3895571 . N . . . . GT ./. +NC_002945.4 3895572 . N . . . . GT ./. +NC_002945.4 3895573 . N . . . . GT ./. +NC_002945.4 3895574 . N . . . . GT ./. +NC_002945.4 3895575 . N . . . . GT ./. +NC_002945.4 3895576 . N . . . . GT ./. +NC_002945.4 3895577 . N . . . . GT ./. +NC_002945.4 3895578 . N . . . . GT ./. +NC_002945.4 3895579 . N . . . . GT ./. +NC_002945.4 3895580 . N . . . . GT ./. +NC_002945.4 3895581 . N . . . . GT ./. +NC_002945.4 3895582 . N . . . . GT ./. +NC_002945.4 3895583 . N . . . . GT ./. +NC_002945.4 3895584 . N . . . . GT ./. +NC_002945.4 3895585 . N . . . . GT ./. +NC_002945.4 3895586 . N . . . . GT ./. +NC_002945.4 3895587 . N . . . . GT ./. +NC_002945.4 3895588 . N . . . . GT ./. +NC_002945.4 3895589 . N . . . . GT ./. +NC_002945.4 3895590 . N . . . . GT ./. +NC_002945.4 3895591 . N . . . . GT ./. +NC_002945.4 3895592 . N . . . . GT ./. +NC_002945.4 3895593 . N . . . . GT ./. +NC_002945.4 3895594 . N . . . . GT ./. +NC_002945.4 3895595 . N . . . . GT ./. +NC_002945.4 3895596 . N . . . . GT ./. +NC_002945.4 3895597 . N . . . . GT ./. +NC_002945.4 3895598 . N . . . . GT ./. +NC_002945.4 3895599 . N . . . . GT ./. +NC_002945.4 3895600 . N . . . . GT ./. +NC_002945.4 3895601 . N . . . . GT ./. +NC_002945.4 3895602 . N . . . . GT ./. +NC_002945.4 3895603 . N . . . . GT ./. +NC_002945.4 3895604 . N . . . . GT ./. +NC_002945.4 3895605 . N . . . . GT ./. +NC_002945.4 3895606 . N . . . . GT ./. +NC_002945.4 3895607 . N . . . . GT ./. +NC_002945.4 3895608 . N . . . . GT ./. +NC_002945.4 3895609 . N . . . . GT ./. +NC_002945.4 3895610 . N . . . . GT ./. +NC_002945.4 3895611 . N . . . . GT ./. +NC_002945.4 3895612 . N . . . . GT ./. +NC_002945.4 3895613 . N . . . . GT ./. +NC_002945.4 3895614 . N . . . . GT ./. +NC_002945.4 3895615 . N . . . . GT ./. +NC_002945.4 3895616 . N . . . . GT ./. +NC_002945.4 3895617 . N . . . . GT ./. +NC_002945.4 3895618 . N . . . . GT ./. +NC_002945.4 3895619 . N . . . . GT ./. +NC_002945.4 3895620 . N . . . . GT ./. +NC_002945.4 3895621 . N . . . . GT ./. +NC_002945.4 3895622 . N . . . . GT ./. +NC_002945.4 3895623 . N . . . . GT ./. +NC_002945.4 3895624 . N . . . . GT ./. +NC_002945.4 3895625 . N . . . . GT ./. +NC_002945.4 3895626 . N . . . . GT ./. +NC_002945.4 3895627 . N . . . . GT ./. +NC_002945.4 3895628 . N . . . . GT ./. +NC_002945.4 3895629 . N . . . . GT ./. +NC_002945.4 3895630 . N . . . . GT ./. +NC_002945.4 3895631 . N . . . . GT ./. +NC_002945.4 3895632 . N . . . . GT ./. +NC_002945.4 3895633 . N . . . . GT ./. +NC_002945.4 3895634 . N . . . . GT ./. +NC_002945.4 3895635 . N . . . . GT ./. +NC_002945.4 3895636 . N . . . . GT ./. +NC_002945.4 3895637 . N . . . . GT ./. +NC_002945.4 3895638 . N . . . . GT ./. +NC_002945.4 3895639 . N . . . . GT ./. +NC_002945.4 3895640 . N . . . . GT ./. +NC_002945.4 3895641 . N . . . . GT ./. +NC_002945.4 3895642 . N . . . . GT ./. +NC_002945.4 3895643 . N . . . . GT ./. +NC_002945.4 3895644 . N . . . . GT ./. +NC_002945.4 3895645 . N . . . . GT ./. +NC_002945.4 3895646 . N . . . . GT ./. +NC_002945.4 3896539 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.59;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:45,3,0 +NC_002945.4 3898533 . C T 6815.77 . AC=2;AF=1.00;AN=2;DP=234;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.66;QD=29.38;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,232:232:99:6844,690,0 +NC_002945.4 3940591 . G A 7763.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.690;ClippingRankSum=0.000;DP=254;ExcessHet=3.0103;FS=4.789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.43;ReadPosRankSum=2.144;SOR=1.470 GT:AD:DP:GQ:PL 1/1:1,246:247:99:7792,724,0 +NC_002945.4 3941063 . G C 11172.73 . AC=2;AF=1.00;AN=2;DP=252;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.14;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,250:250:99:11210,753,0 +NC_002945.4 3952423 . G A 4983.77 . AC=2;AF=1.00;AN=2;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.84;SOR=1.098 GT:AD:DP:GQ:PL 1/1:0,179:179:99:5012,526,0 +NC_002945.4 3957298 . C T 7547.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.285;ClippingRankSum=0.000;DP=236;ExcessHet=3.0103;FS=4.158;MLEAC=2;MLEAF=1.00;MQ=59.93;MQRankSum=-0.047;QD=32.39;ReadPosRankSum=0.870;SOR=2.667 GT:AD:DP:GQ:PL 1/1:2,231:233:99:7576,671,0 +NC_002945.4 3966871 . G A 8379.77 . AC=2;AF=1.00;AN=2;DP=281;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.82;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,281:281:99:8408,837,0 +NC_002945.4 3969490 . T C 8758.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.929;ClippingRankSum=0.000;DP=286;ExcessHet=3.0103;FS=3.134;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.63;ReadPosRankSum=3.022;SOR=0.325 GT:AD:DP:GQ:PL 1/1:1,285:286:99:8787,843,0 +NC_002945.4 3980068 . N . . . . GT ./. +NC_002945.4 3980069 . N . . . . GT ./. +NC_002945.4 3980070 . N . . . . GT ./. +NC_002945.4 3980071 . N . . . . GT ./. +NC_002945.4 3980072 . N . . . . GT ./. +NC_002945.4 3980073 . N . . . . GT ./. +NC_002945.4 3980074 . N . . . . GT ./. +NC_002945.4 3980075 . N . . . . GT ./. +NC_002945.4 3980076 . N . . . . GT ./. +NC_002945.4 3980077 . N . . . . GT ./. +NC_002945.4 3980078 . N . . . . GT ./. +NC_002945.4 3980079 . N . . . . GT ./. +NC_002945.4 3980080 . N . . . . GT ./. +NC_002945.4 3980081 . N . . . . GT ./. +NC_002945.4 3980082 . N . . . . GT ./. +NC_002945.4 3980083 . N . . . . GT ./. +NC_002945.4 3980084 . N . . . . GT ./. +NC_002945.4 3980085 . N . . . . GT ./. +NC_002945.4 3980086 . N . . . . GT ./. +NC_002945.4 3980087 . N . . . . GT ./. +NC_002945.4 3980088 . N . . . . GT ./. +NC_002945.4 3980089 . N . . . . GT ./. +NC_002945.4 3980090 . N . . . . GT ./. +NC_002945.4 3980091 . N . . . . GT ./. +NC_002945.4 3980092 . N . . . . GT ./. +NC_002945.4 3980093 . N . . . . GT ./. +NC_002945.4 3980094 . N . . . . GT ./. +NC_002945.4 3980095 . N . . . . GT ./. +NC_002945.4 3980096 . N . . . . GT ./. +NC_002945.4 3980097 . N . . . . GT ./. +NC_002945.4 4007648 . C T 5958.77 . AC=2;AF=1.00;AN=2;DP=212;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.38;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,210:210:99:5987,623,0 +NC_002945.4 4010760 . T C 6949.77 . AC=2;AF=1.00;AN=2;DP=217;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.03;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,217:217:99:6978,649,0 +NC_002945.4 4017697 . G C 7625.77 . AC=2;AF=1.00;AN=2;DP=270;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.35;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,269:269:99:7654,798,0 +NC_002945.4 4046956 . G A 9476.77 . AC=2;AF=1.00;AN=2;DP=326;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.07;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,326:326:99:9505,974,0 +NC_002945.4 4085392 . A G 5041.77 . AC=2;AF=1.00;AN=2;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.61;SOR=1.641 GT:AD:DP:GQ:PL 1/1:0,150:150:99:5070,448,0 +NC_002945.4 4096612 . T G 10812.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.998;ClippingRankSum=0.000;DP=357;ExcessHet=3.0103;FS=3.097;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.46;ReadPosRankSum=1.096;SOR=0.296 GT:AD:DP:GQ:PL 1/1:1,354:355:99:10841,1051,0 +NC_002945.4 4107082 . C T 3179.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.383;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=13.568;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.87;ReadPosRankSum=2.652;SOR=2.732 GT:AD:DP:GQ:PL 1/1:2,101:103:99:3208,285,0 +NC_002945.4 4107438 . G A 3527.77 . AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.91;QD=25.38;SOR=1.510 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3556,404,0 +NC_002945.4 4108797 . C T 6930.77 . AC=2;AF=1.00;AN=2;DP=244;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.88;SOR=1.484 GT:AD:DP:GQ:PL 1/1:0,240:240:99:6959,708,0 +NC_002945.4 4130927 . A C 6203.77 . AC=2;AF=1.00;AN=2;DP=202;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.02;SOR=0.911 GT:AD:DP:GQ:PL 1/1:0,200:200:99:6232,597,0 +NC_002945.4 4149101 . C A 9931.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.967;ClippingRankSum=0.000;DP=342;ExcessHet=3.0103;FS=3.218;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.04;ReadPosRankSum=-0.409;SOR=0.385 GT:AD:DP:GQ:PL 1/1:1,341:342:99:9960,1009,0 +NC_002945.4 4160782 . A G 10900.77 . AC=2;AF=1.00;AN=2;DP=357;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.53;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,357:357:99:10929,1066,0 +NC_002945.4 4162554 . T C 5497.77 . AC=2;AF=1.00;AN=2;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.53;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,169:169:99:5526,506,0 +NC_002945.4 4173149 . G A 7268.77 . AC=2;AF=1.00;AN=2;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.45;SOR=3.496 GT:AD:DP:GQ:PL 1/1:0,211:211:99:7297,623,0 +NC_002945.4 4178582 . C T 9122.77 . AC=2;AF=1.00;AN=2;DP=310;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.43;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,310:310:99:9151,925,0 +NC_002945.4 4180986 . A G 8466.77 . AC=2;AF=1.00;AN=2;DP=275;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.90;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,274:274:99:8495,820,0 +NC_002945.4 4191866 . G A 11591.77 . AC=2;AF=1.00;AN=2;DP=398;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.27;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,396:396:99:11620,1182,0 +NC_002945.4 4215627 . C T 8118.77 . AC=2;AF=1.00;AN=2;DP=289;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.19;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,288:288:99:8147,856,0 +NC_002945.4 4259281 . T C 2243.77 . AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=39.70;QD=31.41;SOR=8.051 GT:AD:DP:GQ:PL 1/1:0,55:55:99:2272,164,0 +NC_002945.4 4293934 . N . . . . GT ./. +NC_002945.4 4293935 . N . . . . GT ./. +NC_002945.4 4293936 . N . . . . GT ./. +NC_002945.4 4293937 . N . . . . GT ./. +NC_002945.4 4293938 . N . . . . GT ./. +NC_002945.4 4293939 . N . . . . GT ./. +NC_002945.4 4293940 . N . . . . GT ./. +NC_002945.4 4293941 . N . . . . GT ./. +NC_002945.4 4293942 . N . . . . GT ./. +NC_002945.4 4293943 . N . . . . GT ./. +NC_002945.4 4293944 . N . . . . GT ./. +NC_002945.4 4293945 . N . . . . GT ./. +NC_002945.4 4293946 . N . . . . GT ./. +NC_002945.4 4293947 . N . . . . GT ./. +NC_002945.4 4293948 . N . . . . GT ./. +NC_002945.4 4293949 . N . . . . GT ./. +NC_002945.4 4293950 . N . . . . GT ./. +NC_002945.4 4293951 . N . . . . GT ./. +NC_002945.4 4293952 . N . . . . GT ./. +NC_002945.4 4294031 . N . . . . GT ./. +NC_002945.4 4294032 . N . . . . GT ./. +NC_002945.4 4294033 . N . . . . GT ./. +NC_002945.4 4294034 . N . . . . GT ./. +NC_002945.4 4294035 . N . . . . GT ./. +NC_002945.4 4294036 . N . . . . GT ./. +NC_002945.4 4294037 . N . . . . GT ./. +NC_002945.4 4294038 . N . . . . GT ./. +NC_002945.4 4294039 . N . . . . GT ./. +NC_002945.4 4294040 . N . . . . GT ./. +NC_002945.4 4294041 . N . . . . GT ./. +NC_002945.4 4294042 . N . . . . GT ./. +NC_002945.4 4294043 . N . . . . GT ./. +NC_002945.4 4294044 . N . . . . GT ./. +NC_002945.4 4294045 . N . . . . GT ./. +NC_002945.4 4294046 . N . . . . GT ./. +NC_002945.4 4294047 . N . . . . GT ./. +NC_002945.4 4294048 . N . . . . GT ./. +NC_002945.4 4294049 . N . . . . GT ./. +NC_002945.4 4294050 . N . . . . GT ./. +NC_002945.4 4294051 . N . . . . GT ./. +NC_002945.4 4294052 . N . . . . GT ./. +NC_002945.4 4294053 . N . . . . GT ./. +NC_002945.4 4294054 . N . . . . GT ./. +NC_002945.4 4294055 . N . . . . GT ./. +NC_002945.4 4294056 . N . . . . GT ./. +NC_002945.4 4294057 . N . . . . GT ./. +NC_002945.4 4294058 . N . . . . GT ./. +NC_002945.4 4294059 . N . . . . GT ./. +NC_002945.4 4294060 . N . . . . GT ./. +NC_002945.4 4294061 . N . . . . GT ./. +NC_002945.4 4294062 . N . . . . GT ./. +NC_002945.4 4294063 . N . . . . GT ./. +NC_002945.4 4294064 . N . . . . GT ./. +NC_002945.4 4294065 . N . . . . GT ./. +NC_002945.4 4294066 . N . . . . GT ./. +NC_002945.4 4294067 . N . . . . GT ./. +NC_002945.4 4294068 . N . . . . GT ./. +NC_002945.4 4294069 . N . . . . GT ./. +NC_002945.4 4294070 . N . . . . GT ./. +NC_002945.4 4294071 . N . . . . GT ./. +NC_002945.4 4294072 . N . . . . GT ./. +NC_002945.4 4294073 . N . . . . GT ./. +NC_002945.4 4294074 . N . . . . GT ./. +NC_002945.4 4294075 . N . . . . GT ./. +NC_002945.4 4294076 . N . . . . GT ./. +NC_002945.4 4294077 . N . . . . GT ./. +NC_002945.4 4298265 . T C 5021.77 . AC=2;AF=1.00;AN=2;DP=152;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.04;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,152:152:99:5050,454,0 +NC_002945.4 4311302 . C T 10501.77 . AC=2;AF=1.00;AN=2;DP=348;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.18;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,348:348:99:10530,1036,0 +NC_002945.4 4311425 . C T 9110.77 . AC=2;AF=1.00;AN=2;DP=309;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.48;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,309:309:99:9139,923,0 +NC_002945.4 4321337 . T C 8414.77 . AC=2;AF=1.00;AN=2;DP=269;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.28;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,269:269:99:8443,805,0 +NC_002945.4 4339036 . T G 6217.77 . AC=2;AF=1.00;AN=2;DP=223;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.88;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,223:223:99:6246,660,0