changeset 1:44231ef8167a draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/winnowmap commit a8ec6c1845b23188ea18c459d8b0d9126498fecc"
author iuc
date Mon, 10 May 2021 19:28:32 +0000
parents 1c070debf549
children 35ea4a8b1ea6
files macros.xml test-data/mini_reads.paf test-data/winnowmap-self-homology.bam test-data/winnowmap-test1-fasta.bam test-data/winnowmap-test1-fasta.cram test-data/winnowmap-test1.bam test-data/winnowmap-test2-fasta.bam test-data/winnowmap-test2.bam
diffstat 8 files changed, 9 insertions(+), 9 deletions(-) [+]
line wrap: on
line diff
--- a/macros.xml	Thu Apr 29 21:35:38 2021 +0000
+++ b/macros.xml	Mon May 10 19:28:32 2021 +0000
@@ -1,5 +1,5 @@
 <macros>
-    <token name="@TOOL_VERSION@">2.02</token>
+    <token name="@TOOL_VERSION@">2.03</token>
     <xml name="edam_ontology">
         <edam_topics>                                                                                  
             <edam_topic>topic_0102</edam_topic>
--- a/test-data/mini_reads.paf	Thu Apr 29 21:35:38 2021 +0000
+++ b/test-data/mini_reads.paf	Mon May 10 19:28:32 2021 +0000
@@ -1,11 +1,11 @@
-m140213_230323_42129_c100520410120000001823082509281362_s1_X0/817/0_20440	20440	28	20433	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/817/0_20440	20440	28	20433	9970	20405	60	tp:A:P	cm:i:767	s1:i:9970	s2:i:0	rl:i:0
-m140213_230323_42129_c100520410120000001823082509281362_s1_X0/728/0_19456	19456	9	19449	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/728/0_19456	19456	9	19449	9437	19440	60	tp:A:P	cm:i:721	s1:i:9437	s2:i:0	rl:i:0
-m140213_230323_42129_c100520410120000001823082509281362_s1_X0/476/0_18315	18315	5	18269	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/476/0_18315	18315	5	18269	9095	18264	60	tp:A:P	cm:i:689	s1:i:9095	s2:i:0	rl:i:0
-m140213_230323_42129_c100520410120000001823082509281362_s1_X0/987/0_17012	17012	43	16996	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/987/0_17012	17012	43	16996	8224	16953	60	tp:A:P	cm:i:625	s1:i:8224	s2:i:0	rl:i:0
-m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1078/0_15526	15526	32	15525	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1078/0_15526	15526	32	15525	7388	15493	60	tp:A:P	cm:i:569	s1:i:7388	s2:i:0	rl:i:0
-m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1447/0_15191	15191	2	15158	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1447/0_15191	15191	2	15158	7350	15156	60	tp:A:P	cm:i:552	s1:i:7350	s2:i:0	rl:i:0
-m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1368/0_14671	14671	41	14622	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1368/0_14671	14671	41	14622	7197	14581	60	tp:A:P	cm:i:566	s1:i:7197	s2:i:0	rl:i:0
-m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1004/12623_25261	12638	2	12589	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1004/12623_25261	12638	2	12589	6062	12587	60	tp:A:P	cm:i:465	s1:i:6062	s2:i:0	rl:i:0
+m140213_230323_42129_c100520410120000001823082509281362_s1_X0/817/0_20440	20440	28	20433	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/817/0_20440	20440	28	20433	10207	20405	60	tp:A:P	cm:i:785	s1:i:10207	s2:i:0	rl:i:0
+m140213_230323_42129_c100520410120000001823082509281362_s1_X0/728/0_19456	19456	9	19449	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/728/0_19456	19456	9	19449	9604	19440	60	tp:A:P	cm:i:735	s1:i:9604	s2:i:0	rl:i:0
+m140213_230323_42129_c100520410120000001823082509281362_s1_X0/476/0_18315	18315	5	18269	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/476/0_18315	18315	5	18269	9226	18264	60	tp:A:P	cm:i:700	s1:i:9226	s2:i:0	rl:i:0
+m140213_230323_42129_c100520410120000001823082509281362_s1_X0/987/0_17012	17012	43	16996	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/987/0_17012	17012	43	16996	8404	16953	60	tp:A:P	cm:i:640	s1:i:8404	s2:i:0	rl:i:0
+m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1078/0_15526	15526	32	15525	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1078/0_15526	15526	32	15525	7555	15493	60	tp:A:P	cm:i:584	s1:i:7555	s2:i:0	rl:i:0
+m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1447/0_15191	15191	2	15158	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1447/0_15191	15191	2	15158	7481	15156	60	tp:A:P	cm:i:565	s1:i:7481	s2:i:0	rl:i:0
+m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1368/0_14671	14671	41	14622	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1368/0_14671	14671	41	14622	7265	14581	60	tp:A:P	cm:i:571	s1:i:7265	s2:i:0	rl:i:0
+m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1004/12623_25261	12638	2	12589	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1004/12623_25261	12638	2	12589	6172	12587	60	tp:A:P	cm:i:474	s1:i:6172	s2:i:0	rl:i:0
 m140213_230323_42129_c100520410120000001823082509281362_s1_X0/247/0_9332	9332	22	9326	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/247/0_9332	9332	22	9326	4714	9304	60	tp:A:P	cm:i:371	s1:i:4714	s2:i:0	rl:i:0
 m140213_230323_42129_c100520410120000001823082509281362_s1_X0/928/0_9016	9016	34	9000	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/928/0_9016	9016	34	9000	4385	8966	60	tp:A:P	cm:i:340	s1:i:4385	s2:i:0	rl:i:0
 m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1427/0_8831	8831	21	8782	+	m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1427/0_8831	8831	21	8782	4493	8761	60	tp:A:P	cm:i:337	s1:i:4493	s2:i:0	rl:i:0
Binary file test-data/winnowmap-self-homology.bam has changed
Binary file test-data/winnowmap-test1-fasta.bam has changed
Binary file test-data/winnowmap-test1-fasta.cram has changed
Binary file test-data/winnowmap-test1.bam has changed
Binary file test-data/winnowmap-test2-fasta.bam has changed
Binary file test-data/winnowmap-test2.bam has changed