Mercurial > repos > jackcurragh > ribogalaxy_bedtools_genomcov

diff bedtools_genomecov/genomeCoverageBed.xml @ 10:4371d34bfd84 draft

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author jackcurragh
date Fri, 27 Jan 2023 09:42:28 +0000
parents 9baff1cd6af2
children dd86f2ed6383
line wrap: on
line diff
--- a/bedtools_genomecov/genomeCoverageBed.xml	Thu Jan 26 15:14:08 2023 +0000
+++ b/bedtools_genomecov/genomeCoverageBed.xml	Fri Jan 27 09:42:28 2023 +0000
@@ -33,6 +33,7 @@
 $five
 $three
 > '$output'
+export LC_COLLATE=C; sort -k1,1 -k2,2n '$output' > '${output}.tmp' && mv '${output}.tmp' '$output'
     ]]></command>
     <inputs>
         <conditional name="input_type">