# HG changeset patch
# User jackcurragh
# Date 1674812548 0
# Node ID 4371d34bfd84e8c86291441a4dd446f09e548132
# Parent  9baff1cd6af2a0a1dbb205b1d47e476a7f274317
Uploaded

diff -r 9baff1cd6af2 -r 4371d34bfd84 bedtools_genomecov/genomeCoverageBed.xml
--- a/bedtools_genomecov/genomeCoverageBed.xml	Thu Jan 26 15:14:08 2023 +0000
+++ b/bedtools_genomecov/genomeCoverageBed.xml	Fri Jan 27 09:42:28 2023 +0000
@@ -33,6 +33,7 @@
 $five
 $three
 > '$output'
+export LC_COLLATE=C; sort -k1,1 -k2,2n '$output' > '${output}.tmp' && mv '${output}.tmp' '$output'
     ]]></command>
     <inputs>
         <conditional name="input_type">
diff -r 9baff1cd6af2 -r 4371d34bfd84 bedtools_genomecov/macros.xml
--- a/bedtools_genomecov/macros.xml	Thu Jan 26 15:14:08 2023 +0000
+++ b/bedtools_genomecov/macros.xml	Fri Jan 27 09:42:28 2023 +0000
@@ -10,7 +10,7 @@
             <xref type="bio.tools">bedtools</xref>
         </xrefs>
     </xml>
-    <token name="@TOOL_VERSION@">2.30.0</token>
+    <token name="@TOOL_VERSION@">2.30.1</token>
     <token name="@SAMTOOLS_VERSION@">1.9</token>
     <token name="@STD_BEDTOOLS_INPUTS@">bed,bedgraph,gff,vcf,encodepeak</token>
     <token name="@STD_BEDTOOLS_INPUT_LABEL@">BED/bedGraph/GFF/VCF/EncodePeak</token>