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comparison bowtie_transcriptome_wrapper/tool-data/bowtie_transcriptome_indexes.loc.sample @ 17:816d9c5ef4a8 draft

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author jackcurragh
date Thu, 09 Feb 2023 14:34:07 +0000
parents bff7f8f0ba98
children 5fe541e5198b
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16:bff7f8f0ba98 17:816d9c5ef4a8
1 homo_sapiens_gencode39 hg_gen39 Homo sapiens (gencode 39) Transcriptome /mnt/data/indices/bowtie/transcriptome/homo_sapiens_gencode39/homo_sapiens_gencode39_transcriptome 1 homo_sapiens_gencode39 hg_gen39 Homo sapiens (gencode 39) Transcriptome /mnt/data/indices/bowtie/transcriptome/homo_sapiens_gencode39/homo_sapiens_gencode39_transcriptome
2 homo_sapiens_gencode28 hg_gen28 Homo sapiens (gencode 28) Transcriptome /mnt/data/indices/bowtie/transcriptome/homo_sapiens_gencode28/homo_sapiens_gencode28_transcriptome 2 homo_sapiens_gencode28 hg_gen28 Homo sapiens (gencode 28) Transcriptome /mnt/data/indices/bowtie/transcriptome/homo_sapiens_gencode28/homo_sapiens_gencode28_transcriptome
3 homo_sapiens_gencode25 hg_gen25 Homo sapiens (gencode 25) Transcriptome /mnt/data/indices/bowtie/transcriptome/homo_sapiens_gencode25/homo_sapiens_gencode25_transcriptome 3 homo_sapiens_gencode25 hg_gen25 Homo sapiens (gencode 25) Transcriptome /mnt/data/indices/bowtie/transcriptome/homo_sapiens_gencode25/homo_sapiens_gencode25_transcriptome
4 mus_musculus_m28 m28 Mus musculus (m28) Transcriptome /mnt/data/indices/bowtie/transcriptome/mus_musculus_m28/mus_musculus_m28_transcriptome 4 mus_musculus_m28 m28 Mus musculus (m28) Transcriptome /mnt/data/indices/bowtie/transcriptome/mus_musculus_m28/mus_musculus_m28_transcriptome
5 mus_musculus_m25 m25 Mus musculus (m25) Transcriptome /mnt/data/indices/bowtie/transcriptome/mus_musculus_m25/mus_musculus_m25_transcriptome 5 mus_musculus_m25 m25 Mus musculus (m25) Transcriptome /mnt/data/indices/bowtie/transcriptome/mus_musculus_m25/mus_musculus_m25_transcriptome
6 mus_musculus_m14 m14 Mus musculus (m14) Transcriptome /mnt/data/indices/bowtie/transcriptome/mus_musculus_m14/mus_musculus_m14_transcriptome
7 mus_musculus_m10 m10 Mus musculus (m10) Transcriptome /mnt/data/indices/bowtie/transcriptome/mus_musculus_m10/mus_musculus_m10_transcriptome 6 mus_musculus_m10 m10 Mus musculus (m10) Transcriptome /mnt/data/indices/bowtie/transcriptome/mus_musculus_m10/mus_musculus_m10_transcriptome
8 drosophila_melanogaster_dm3 dm3 Drosophila melanogaster (dm3) Transcriptome /mnt/data/indices/bowtie/transcriptome/drosophila_melanogater_dm3/drosophila_melanogater_dm3_transcriptome 7 drosophila_melanogaster_dm3 dm3 Drosophila melanogaster (dm3) Transcriptome /mnt/data/indices/bowtie/transcriptome/drosophila_melanogater_dm3/drosophila_melanogater_dm3_transcriptome
9 drosophila_melanogaster_dm6 dm6 Drosophila melanogaster (dm6) Transcriptome /mnt/data/indices/bowtie/transcriptome/drosophila_melanogater_dm6/drosophila_melanogater_dm6_transcriptome 8 drosophila_melanogaster_dm6 dm6 Drosophila melanogaster (dm6) Transcriptome /mnt/data/indices/bowtie/transcriptome/drosophila_melanogater_dm6/drosophila_melanogater_dm6_transcriptome
10 sacCer_9 sacCer9 Saccharomyces cerevisiae (v9) Transcriptome /mnt/data/indices/bowtie/transcriptome/sacCer_9/sacCer_9_transcriptome 9 sacCer_9 sacCer9 Saccharomyces cerevisiae (v9) Transcriptome /mnt/data/indices/bowtie/transcriptome/sacCer_9/sacCer_9_transcriptome
11 sarCer_3 sacCer3 Saccharomyces cerevisiae (v3) Transcriptome /mnt/data/indices/bowtie/transcriptome/sacCer_3/sacCer_3_transcriptome 10 sarCer_3 sacCer3 Saccharomyces cerevisiae (v3) Transcriptome /mnt/data/indices/bowtie/transcriptome/sacCer_3/sacCer_3_transcriptome
12 E_coli_K12_MG1655 e_coli Escherichia coli (K12 MG1655) Transcriptome /mnt/data/indices/bowtie/transcriptome/E_coli_K12_MG1655/E_coli_K12_MG1655_transcriptome 11 E_coli_K12_MG1655 e_coli Escherichia coli (K12 MG1655) Transcriptome /mnt/data/indices/bowtie/transcriptome/E_coli_K12_MG1655/E_coli_K12_MG1655_transcriptome
13 Arabidopsis araThal Arabidopsis thaliana (TAIR10) Transcriptome /mnt/data/indices/bowtie/transcriptome/Arabidopsis/Arabidopsis_transcriptome 12 Arabidopsis araThal Arabidopsis thaliana (TAIR10) Transcriptome /mnt/data/indices/bowtie/transcriptome/Arabidopsis/Arabidopsis_transcriptome
14 mus_musculus_m25 m25 Mus musculus test Transcriptome /mnt/data/indices/bowtie/transcriptome/mus_musculus_m25/mus_musculus_m25_transcriptome 13 mus_musculus_m14 m_gen14 Mus musculus (m14) Transcriptome /mnt/data/indices/bowtie/transcriptome/mus_musculus_m14/mus_musculus_m14_transcriptome
15 14