Mercurial > repos > jackcurragh > ribogalaxy_bowtie_transcriptome

changeset 18:5fe541e5198b draft

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author jackcurragh
date Thu, 09 Feb 2023 14:37:14 +0000
parents 816d9c5ef4a8
children 75f8e498d26f
files bowtie_transcriptome_wrapper/bowtie_transcriptomic_wrapper.xml bowtie_transcriptome_wrapper/tool-data/bowtie_transcriptome_indexes.loc.sample
diffstat 2 files changed, 2 insertions(+), 3 deletions(-) [+]
line wrap: on
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--- a/bowtie_transcriptome_wrapper/bowtie_transcriptomic_wrapper.xml	Thu Feb 09 14:34:07 2023 +0000
+++ b/bowtie_transcriptome_wrapper/bowtie_transcriptomic_wrapper.xml	Thu Feb 09 14:37:14 2023 +0000
@@ -1,4 +1,4 @@
-<tool id="bowtie_transcriptomic_wrapper" name="Bowtie Transcriptome Alignment" version="1.7.3">
+<tool id="bowtie_transcriptomic_wrapper" name="Bowtie Transcriptome Alignment" version="1.7.4">
   <description>Align to Transcriptome using Bowtie</description>
   <requirements>
     <requirement type="package" version="1.2.0">bowtie</requirement>
--- a/bowtie_transcriptome_wrapper/tool-data/bowtie_transcriptome_indexes.loc.sample	Thu Feb 09 14:34:07 2023 +0000
+++ b/bowtie_transcriptome_wrapper/tool-data/bowtie_transcriptome_indexes.loc.sample	Thu Feb 09 14:37:14 2023 +0000
@@ -2,7 +2,6 @@
 homo_sapiens_gencode28	hg_gen28	Homo sapiens (gencode 28) Transcriptome	/mnt/data/indices/bowtie/transcriptome/homo_sapiens_gencode28/homo_sapiens_gencode28_transcriptome
 homo_sapiens_gencode25	hg_gen25	Homo sapiens (gencode 25) Transcriptome	/mnt/data/indices/bowtie/transcriptome/homo_sapiens_gencode25/homo_sapiens_gencode25_transcriptome
 mus_musculus_m28	m28	Mus musculus (m28) Transcriptome	/mnt/data/indices/bowtie/transcriptome/mus_musculus_m28/mus_musculus_m28_transcriptome
-mus_musculus_m25	m25	Mus musculus (m25) Transcriptome	/mnt/data/indices/bowtie/transcriptome/mus_musculus_m25/mus_musculus_m25_transcriptome
 mus_musculus_m10	m10	Mus musculus (m10) Transcriptome	/mnt/data/indices/bowtie/transcriptome/mus_musculus_m10/mus_musculus_m10_transcriptome
 drosophila_melanogaster_dm3	dm3	Drosophila melanogaster (dm3) Transcriptome	/mnt/data/indices/bowtie/transcriptome/drosophila_melanogater_dm3/drosophila_melanogater_dm3_transcriptome
 drosophila_melanogaster_dm6	dm6	Drosophila melanogaster (dm6) Transcriptome	/mnt/data/indices/bowtie/transcriptome/drosophila_melanogater_dm6/drosophila_melanogater_dm6_transcriptome
@@ -10,5 +9,5 @@
 sarCer_3	sacCer3	Saccharomyces cerevisiae (v3) Transcriptome	/mnt/data/indices/bowtie/transcriptome/sacCer_3/sacCer_3_transcriptome
 E_coli_K12_MG1655	e_coli	Escherichia coli (K12 MG1655) Transcriptome	/mnt/data/indices/bowtie/transcriptome/E_coli_K12_MG1655/E_coli_K12_MG1655_transcriptome
 Arabidopsis	araThal	Arabidopsis thaliana (TAIR10) Transcriptome	/mnt/data/indices/bowtie/transcriptome/Arabidopsis/Arabidopsis_transcriptome
-mus_musculus_m14	m_gen14	Mus musculus (m14) Transcriptome	/mnt/data/indices/bowtie/transcriptome/mus_musculus_m14/mus_musculus_m14_transcriptome
+mus_musculus_m25	m_gen14	Mus musculus (m14) Transcriptome	/mnt/data/indices/bowtie/transcriptome/mus_musculus_m14/mus_musculus_m14_transcriptome