# HG changeset patch # User jackcurragh # Date 1652869709 0 # Node ID feeee18b008439df8883e7de4154695e4c6fe774 # Parent ca6a237895f3dea5d6e7cebb55295614f273478a Uploaded diff -r ca6a237895f3 -r feeee18b0084 get_chrom_sizes/calculating_chrom.sizes.py --- a/get_chrom_sizes/calculating_chrom.sizes.py Wed May 18 10:24:56 2022 +0000 +++ b/get_chrom_sizes/calculating_chrom.sizes.py Wed May 18 10:28:29 2022 +0000 @@ -13,7 +13,7 @@ if fasta_source == 'builtin': genome = builtin -chromSizesoutput = open('output',"w") +chromSizesoutput = open(output,"w") records = [] record = False diff -r ca6a237895f3 -r feeee18b0084 get_chrom_sizes/output --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/get_chrom_sizes/output Wed May 18 10:28:29 2022 +0000 @@ -0,0 +1,7 @@ +NC_003070.9 30427671 +NC_003071.7 19698289 +NC_003074.8 23459830 +NC_003075.7 18585056 +NC_003076.8 26975502 +NC_037304.1 367808 +NC_000932.1 154478