diff trips_bam_to_sqlite/tool-data/builtin_sqlites.loc.sample @ 18:6562f4079f46 draft

Uploaded
author triasteran
date Mon, 13 Feb 2023 11:28:43 +0000
parents bc2a6549fa4a
children d8cc5dbc9fa8
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--- a/trips_bam_to_sqlite/tool-data/builtin_sqlites.loc.sample	Thu Feb 09 11:42:00 2023 +0000
+++ b/trips_bam_to_sqlite/tool-data/builtin_sqlites.loc.sample	Mon Feb 13 11:28:43 2023 +0000
@@ -1,9 +1,11 @@
 arabidopsis_thaliana_TAIR10	TAIR10	Arabidopsis thaliana (TAIR10)	/mnt/data/organism_sqlites/Arabidopsis/arabidopsis_thaliana.TAIR10.sqlite
-Escherichia_coli_str_k_12_substr_mg1655	Ecoli	Escherichia coli str k12 substr mg1655	/mnt/data/organism_sqlites/E_coli_K12_MG1655/Escherichia_coli_str_k_12_substr_mg1655.sqlite
 homo_sapiens_gencode25	g25	Homo sapiens (Gencode 25)	/mnt/data/organism_sqlites/homo_sapiens_gencode25/homo_sapiens.gencode25.sqlite
 homo_sapiens_gencode28	g28	Homo sapiens (Gencode 28)	/mnt/data/organism_sqlites/homo_sapiens_gencode28/homo_sapiens.gencode28.sqlite
 homo_sapiens_gencode39	g39	Homo sapiens (Gencode 39)	/mnt/data/organism_sqlites/homo_sapiens_gencode39/homo_sapiens.gencode39.sqlite
 mus_musculus_m10	m10	Mus musculus (Gencode m10)	/mnt/data/organism_sqlites/mus_musculus_m10/mus_musculus.gencode10.sqlite
 mus_musculus_m14	m14	Mus musculus (Gencode m14)	/mnt/data/organism_sqlites/mus_musculus_m14/mus_musculus.gencode14.sqlite
 mus_musculus_m28	m28	Mus musculus (Gencode m28)	/mnt/data/organism_sqlites/mus_musculus_m28/mus_musculus.gencode28.sqlite
-sacCer_R64	R64	Saccharomyces cerevisiae (R64)	/mnt/data/organism_sqlites/sacCer_R64/Saccharomyces_cerevisiae.R64.sqlite
\ No newline at end of file
+Escherichia_coli_str_k_12_ASM584v2	Ecoli_ASM584v2	Escherichia coli str k12 ASM584v2	/mnt/data/organism_sqlites/E_coli_trips/escherichia_coli.Ensembl_k_12_ASM584v2.sqlite
+sacCer_sgd_R64-1-1	sacCer3_sgd_R64-1-1	Saccharomyces cerevisiae (sgd sacCer3 R64-1-1)	/mnt/data/organism_sqlites/sacCer_R64/Saccharomyces_cerevisiae.R64.sqlite
+
+