# HG changeset patch # User jackcurragh # Date 1653646440 0 # Node ID 8b059b0a19dc16f939111ef3b51b2c0e76fb3a0e # Parent 4ee95ba271a5a9bf80e14d94f1c021931903317a Uploaded diff -r 4ee95ba271a5 -r 8b059b0a19dc trips_bam_to_sqlite/test-data/test.bam Binary file trips_bam_to_sqlite/test-data/test.bam has changed diff -r 4ee95ba271a5 -r 8b059b0a19dc trips_bam_to_sqlite/test-data/test.bamv2.sqlite Binary file trips_bam_to_sqlite/test-data/test.bamv2.sqlite has changed diff -r 4ee95ba271a5 -r 8b059b0a19dc trips_bam_to_sqlite/test-data/test_n_sorted.bam Binary file trips_bam_to_sqlite/test-data/test_n_sorted.bam has changed diff -r 4ee95ba271a5 -r 8b059b0a19dc trips_bam_to_sqlite/test-data/test_n_sorted.bam_n_sorted.bam Binary file trips_bam_to_sqlite/test-data/test_n_sorted.bam_n_sorted.bam has changed diff -r 4ee95ba271a5 -r 8b059b0a19dc trips_bam_to_sqlite/test-data/test_n_sorted.bamv2.sqlite Binary file trips_bam_to_sqlite/test-data/test_n_sorted.bamv2.sqlite has changed diff -r 4ee95ba271a5 -r 8b059b0a19dc trips_bam_to_sqlite/test-data/test_org.sqlite Binary file trips_bam_to_sqlite/test-data/test_org.sqlite has changed diff -r 4ee95ba271a5 -r 8b059b0a19dc trips_bam_to_sqlite/test-data/test_organism.sqlite diff -r 4ee95ba271a5 -r 8b059b0a19dc trips_bam_to_sqlite/test-data/test_sorted.bam Binary file trips_bam_to_sqlite/test-data/test_sorted.bam has changed diff -r 4ee95ba271a5 -r 8b059b0a19dc trips_bam_to_sqlite/test-data/test_sorted.bamv2.sqlite Binary file trips_bam_to_sqlite/test-data/test_sorted.bamv2.sqlite has changed diff -r 4ee95ba271a5 -r 8b059b0a19dc trips_bam_to_sqlite/trips_bam_to_sqlite.xml --- a/trips_bam_to_sqlite/trips_bam_to_sqlite.xml Mon Apr 25 12:40:36 2022 +0000 +++ b/trips_bam_to_sqlite/trips_bam_to_sqlite.xml Fri May 27 10:14:00 2022 +0000 @@ -1,10 +1,11 @@ - - Convert BAM file to SQLITE for TRIPS-Viz + + Convert BAM file to SQLITE for Trips-Viz pysam sqlitedict sqlite - samtools + samtools +