|
106
|
1 <!DOCTYPE html>
|
|
|
2 <html>
|
|
|
3 <head>
|
|
|
4 <meta charset="UTF-8">
|
|
|
5 <meta name=generator content="blast2html; see https://github.com/thehyve/blast2html/">
|
|
|
6
|
|
|
7 <title>Blast output</title>
|
|
|
8
|
|
|
9 <style>
|
|
|
10 body {
|
|
|
11 color: #333333;
|
|
|
12 font-family: Arial,Sans-Serif;
|
|
|
13 }
|
|
|
14
|
|
|
15 :link {
|
|
|
16 color: #336699;
|
|
|
17 }
|
|
|
18
|
|
|
19 .right {
|
|
|
20 float: right;
|
|
|
21 }
|
|
|
22
|
|
|
23 /* Galaxy with html sanitization enabled strips the header of this html page. If so, show the user a warning.*/
|
|
|
24 #strip_html_warning {
|
|
|
25 display: none;
|
|
|
26 }
|
|
|
27
|
|
|
28 #content {
|
|
|
29 margin: 0 2em;
|
|
|
30 padding: 0.5em;
|
|
|
31 border: 1px solid #888888;
|
|
|
32 background-color: #d3dff5;
|
|
|
33 }
|
|
|
34
|
|
|
35 h1, h2, h3, h4, h5, h6 {
|
|
|
36 color: #2A6979;
|
|
|
37 font-family: arial,verdana,sans-serif;
|
|
|
38 letter-spacing: -1px;
|
|
|
39 margin: 1.2em 0 0.3em;
|
|
|
40 }
|
|
|
41
|
|
|
42 h1 {
|
|
114
|
43 font-size: 200%;
|
|
106
|
44 }
|
|
|
45
|
|
|
46 h2 {
|
|
114
|
47 font-size: 150%;
|
|
|
48 }
|
|
|
49
|
|
|
50 h1, h2 {
|
|
|
51 border-bottom: 1px solid #CCCCCC;
|
|
|
52 padding-bottom: 0.1em;
|
|
|
53 }
|
|
|
54
|
|
|
55 h3 {
|
|
106
|
56 font-size: 120%;
|
|
|
57 font-weight: bold;
|
|
|
58 }
|
|
|
59
|
|
114
|
60 h5.darkHeader {
|
|
106
|
61 color: #4D4D4D;
|
|
|
62 letter-spacing: 0;
|
|
|
63 font-weight: bold;
|
|
114
|
64 font-size: 108%;
|
|
106
|
65 }
|
|
|
66
|
|
|
67 #nodata {
|
|
|
68 font-weight: bold;
|
|
|
69 }
|
|
|
70
|
|
|
71 .index {
|
|
|
72 margin-bottom: 3em;
|
|
|
73 }
|
|
|
74 .index div.indexentry {
|
|
|
75 margin: 1.2em 1.6em;
|
|
|
76 font-weight: bold;
|
|
|
77 font-size: 100%;
|
|
|
78 }
|
|
|
79
|
|
|
80 .headerdata {
|
|
|
81 font-size: 90%;
|
|
|
82 }
|
|
|
83 .headerdata .param {
|
|
|
84 font-weight: bold;
|
|
|
85 text-align: right;
|
|
|
86 padding: 0 1em;
|
|
|
87 }
|
|
|
88
|
|
|
89 .grey {
|
|
|
90 background-color: #eeeeee;
|
|
|
91 border: 1px solid #cccccc;
|
|
|
92 padding: 1em;
|
|
|
93 }
|
|
|
94
|
|
|
95 .white {
|
|
|
96 background-color: white;
|
|
|
97 border: 1px solid #cccccc;
|
|
|
98 padding: 1.5em 2%;
|
|
|
99 }
|
|
|
100
|
|
|
101 .graphicrow {
|
|
|
102 clear: left;
|
|
|
103 width: 100%;
|
|
|
104 }
|
|
|
105
|
|
|
106 .graphicitem {
|
|
|
107 float: left;
|
|
|
108 }
|
|
|
109
|
|
|
110
|
|
|
111
|
|
|
112 .graphics .grey {
|
|
|
113 text-align: center;
|
|
|
114 }
|
|
|
115
|
|
|
116 .graphic {
|
|
|
117 background-color: white;
|
|
|
118 border: 2px solid black;
|
|
|
119 padding: 1.5em;
|
|
|
120 margin: auto;
|
|
|
121 }
|
|
|
122
|
|
|
123 .centered, .defline, div.legend, div.tablewrapper {
|
|
|
124 margin-left: auto;
|
|
|
125 margin-right: auto;
|
|
|
126 }
|
|
|
127
|
|
|
128 .defline {
|
|
|
129 background-color: white;
|
|
|
130 border: 1px solid black;
|
|
|
131 margin: .5em auto;
|
|
|
132 padding-left: .2em;
|
|
|
133 padding-right: .2em;
|
|
|
134 max-width: 50em;
|
|
|
135 text-align: left;
|
|
|
136 height: 2.8em;
|
|
|
137 overflow: hidden;
|
|
|
138 }
|
|
|
139
|
|
|
140 div.legend {
|
|
|
141 max-width: 40em;
|
|
|
142 }
|
|
|
143 div.legend div {
|
|
|
144 width: 100%;
|
|
|
145 color: white;
|
|
|
146 font-weight: bold;
|
|
|
147 border-spacing: 0;
|
|
|
148 }
|
|
|
149 div.legend div .graphicitem {
|
|
|
150 width: 20%;
|
|
|
151 padding: 0;
|
|
|
152 margin: 0;
|
|
|
153 border: none;
|
|
|
154 }
|
|
|
155
|
|
|
156 div.tablewrapper {
|
|
|
157 width: 50%;
|
|
|
158 min-width: 60em;
|
|
|
159 }
|
|
|
160
|
|
|
161 /* For small widths we give the graphic 100% */
|
|
|
162 @media (max-width: 72.5em) {
|
|
|
163 div.tablewrapper {
|
|
|
164 width: 100%;
|
|
|
165 min-width: 0px;
|
|
|
166 }
|
|
|
167 }
|
|
|
168
|
|
|
169 .scale {
|
|
|
170 width: 100%;
|
|
|
171 margin: .5em 0;
|
|
|
172 font-weight: bold;
|
|
|
173 }
|
|
|
174 .scale div {
|
|
|
175 color: red;
|
|
|
176 text-align: left;
|
|
|
177 }
|
|
|
178 .scale .graphicrow {
|
|
|
179 margin: .5em 0 .5em 0;
|
|
|
180 color: white;
|
|
|
181 }
|
|
|
182 .scale .graphicitem {
|
|
|
183 position: relative;
|
|
|
184 }
|
|
|
185 .scale .graphicitem div {
|
|
|
186 margin: 0 1px;
|
|
|
187 padding: 0 2px;
|
|
|
188 text-align: right;
|
|
|
189 background-color: red;
|
|
|
190 color: white;
|
|
|
191 }
|
|
|
192 .scale .graphicitem:first-child div {
|
|
|
193 margin-left: 0px;
|
|
|
194 }
|
|
|
195 .scale .graphicitem:last-child div {
|
|
|
196 margin-right: 0px;
|
|
|
197 }
|
|
|
198 .scale .graphicitem .lastlabel {
|
|
|
199 position: absolute;
|
|
|
200 top: 0px;
|
|
|
201 left: 100%;
|
|
|
202 background-color: transparent;
|
|
|
203 color: red;
|
|
|
204 }
|
|
|
205
|
|
|
206 a.matchresult {
|
|
|
207 display: block;
|
|
|
208 margin: 0;
|
|
|
209 padding: 0;
|
|
|
210 }
|
|
|
211 div.matchrow {
|
|
|
212 margin-top: 4px;
|
|
|
213 }
|
|
|
214 div.matchrow, div.matchitem {
|
|
|
215 height: 4px;
|
|
|
216 }
|
|
|
217
|
|
|
218
|
|
|
219 table.descriptiontable {
|
|
|
220 font-size: 85%;
|
|
|
221 border: 1px solid #97b0c8;
|
|
|
222 border-spacing: 0;
|
|
|
223 color: #222222;
|
|
|
224 line-height: 1.3em;
|
|
|
225 background-color: white;
|
|
|
226 }
|
|
|
227 table.descriptiontable col:first-child {
|
|
|
228 width: 100%;
|
|
|
229 }
|
|
|
230 table.descriptiontable tr:hover {
|
|
|
231 background-color: #D5DEE3;
|
|
|
232 }
|
|
|
233 table.descriptiontable th {
|
|
|
234 color: #14376C;
|
|
|
235 font-weight: normal;
|
|
|
236 background-color: #F0F0F0;
|
|
|
237 background: linear-gradient(#FFFFFF, #F0F0F0);
|
|
|
238 border-bottom: 1px solid #D4DFE9;
|
|
|
239 border-right: 1px solid #CFCFCF;
|
|
|
240 border-left: 0px solid black;
|
|
|
241 border-top: 0px solid black;
|
|
|
242 }
|
|
|
243 table.descriptiontable td {
|
|
|
244 overflow: hidden;
|
|
|
245 text-align: center;
|
|
|
246 padding: .4em .8em;
|
|
|
247 }
|
|
|
248 table.descriptiontable td div {
|
|
|
249 width: 1em;
|
|
|
250 overflow: visible;
|
|
|
251 white-space: nowrap;
|
|
|
252 text-align: left;
|
|
|
253 }
|
|
|
254
|
|
|
255
|
|
|
256
|
|
|
257 .alignments .white {
|
|
|
258 padding: 1.5em 1em;
|
|
|
259 }
|
|
|
260
|
|
|
261 .alignment {
|
|
|
262 border-top: 1px solid black;
|
|
|
263 padding-left: 1em;
|
|
|
264 padding-right: 1em;
|
|
|
265 }
|
|
|
266
|
|
|
267 div.linkheader {
|
|
|
268 padding-top: .2em;
|
|
|
269 font-size: 85%;
|
|
|
270 color: #14376C;
|
|
|
271 }
|
|
|
272 div.linkheader a.linkheader {
|
|
|
273 margin-right: 1em;
|
|
|
274 }
|
|
|
275 div.linkheader .right a {
|
|
|
276 text-decoration: none;
|
|
|
277 }
|
|
|
278
|
|
|
279 .title .hittitle {
|
|
|
280 color: #222222;
|
|
|
281 margin-bottom: .3em;
|
|
|
282 }
|
|
|
283 .title .titleinfo {
|
|
|
284 font-size: 80%;
|
|
|
285 margin-top: 0;
|
|
|
286 margin-bottom: .3em;
|
|
|
287 }
|
|
|
288 .title .titleinfo .b {
|
|
|
289 color: #606060;
|
|
|
290 font-weight: bold;
|
|
|
291 font-size: 90%;
|
|
|
292 }
|
|
|
293
|
|
|
294 .moretitles {
|
|
|
295 margin: 1.2em;
|
|
|
296 }
|
|
|
297 .moretitles .titleinfo {
|
|
|
298 margin: 0;
|
|
|
299 padding: 0;
|
|
|
300 }
|
|
|
301 .moretitles .hittitle {
|
|
|
302 margin: .4em 0 .2em 0;
|
|
|
303 padding: 0;
|
|
|
304 }
|
|
|
305
|
|
|
306 a.showmoretitles {
|
|
|
307 font-size: 75%;
|
|
|
308 color: #336699;
|
|
|
309 font-weight: bold;
|
|
|
310 margin-top: 0;
|
|
|
311 }
|
|
|
312 a.showmoretitles:hover {
|
|
|
313 }
|
|
|
314
|
|
|
315 .hotspot {
|
|
|
316 color: #606060;
|
|
|
317 font-family: verdana, arial, sans-serif;
|
|
|
318 margin-bottom: 2.5em;
|
|
|
319 }
|
|
|
320
|
|
|
321 .hotspot p.range {
|
|
|
322 font-size: 70%;
|
|
|
323 margin-top: 0;
|
|
|
324 margin-top: 1em;
|
|
|
325 margin-bottom: .2em;
|
|
|
326 }
|
|
|
327 .hotspot p.range span.range {
|
|
|
328 font-weight: bold;
|
|
|
329 }
|
|
|
330 .hotspot p.range a.range {
|
|
|
331 margin-left: .5em;
|
|
|
332 }
|
|
|
333
|
|
|
334 table.hotspotstable {
|
|
|
335 border-top: 1px solid;
|
|
|
336 border-bottom: 1px solid;
|
|
|
337 text-align: left;
|
|
|
338 border-collapse: collapse;
|
|
|
339 }
|
|
|
340 table.hotspotstable th, table.hotspotstable td {
|
|
|
341 padding: .1em 1em;
|
|
|
342 }
|
|
|
343 table.hotspotstable th {
|
|
|
344 font-size: 70%;
|
|
|
345 }
|
|
|
346 table.hotspotstable td {
|
|
|
347 min-width: 7em;
|
|
|
348 color: #222222;
|
|
|
349 font-size: 80%;
|
|
|
350 }
|
|
|
351
|
|
|
352 pre.alignmentgraphic {
|
|
|
353 color: #222222;
|
|
|
354 }
|
|
|
355
|
|
|
356 footer {
|
|
|
357 text-align: center;
|
|
|
358 color: #cccccc;
|
|
|
359 font-size: 70%;
|
|
|
360 margin-top: 1em;
|
|
|
361 }
|
|
|
362 footer :link {
|
|
|
363 color: #5588cc;
|
|
|
364 }
|
|
|
365
|
|
|
366 </style>
|
|
|
367
|
|
|
368 <script type="text/javascript">
|
|
|
369 function toggle_visibility(id) {
|
|
|
370 var e = document.getElementById(id);
|
|
|
371 if(e.style.display != 'block')
|
|
|
372 e.style.display = 'block';
|
|
|
373 else
|
|
|
374 e.style.display = 'none';
|
|
|
375 }
|
|
|
376 </script>
|
|
|
377
|
|
|
378 </head>
|
|
|
379
|
|
|
380
|
|
|
381 <body>
|
|
|
382
|
|
|
383 <div id="strip_html_warning">
|
|
|
384 <!-- This div should be hidden by the header css block. Galaxy
|
|
|
385 strips all css, breaking this page but making this warning
|
|
|
386 visible. This warning contains some ugly old skool tabular html
|
|
|
387 layout that is not stripped. -->
|
|
|
388 <table bgcolor="#FFE5C9"><tr><td><font color="red"><b>
|
|
|
389 <font size=5><center>This html page seems to have been stripped by Galaxy.</center></font>
|
|
|
390 Disable Galaxy's html sanitization feature to view the full page (see <font face=monospace>sanitize_all_html</font> in your galaxy's universe_wsgi.ini), or download this page instead of viewing it in Galaxy.
|
|
|
391 </b></font></td></tr></table>
|
|
|
392 </div>
|
|
|
393
|
|
|
394 <div id=content>
|
|
|
395
|
|
114
|
396 <section class=header>
|
|
|
397
|
|
|
398 <h1>Nucleotide Blast results</h1>
|
|
|
399
|
|
|
400 <table class=headerdata>
|
|
|
401 <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
|
|
|
402 <tr><td class=param>Database:</td><td></td></tr>
|
|
|
403 </table>
|
|
|
404
|
|
|
405 </section>
|
|
|
406
|
|
106
|
407
|
|
|
408 <section class=index>
|
|
114
|
409 <h2>Queries</h2>
|
|
106
|
410
|
|
|
411 <div class=indexentry><a href="#match1">
|
|
|
412 Query_1: Forward_Primer|NOST-Spec_(Genetic_ID)
|
|
|
413 (20 letters, 0 hits)
|
|
|
414 </a></div>
|
|
|
415 <div class=indexentry><a href="#match2">
|
|
|
416 Query_1: Forward_Primer|NOST-Spec_(Genetic_ID)
|
|
|
417 (20 letters, 0 hits)
|
|
|
418 </a></div>
|
|
|
419 <div class=indexentry><a href="#match3">
|
|
|
420 Query_1: Forward_Primer|NOST-Spec_(Genetic_ID)
|
|
|
421 (20 letters, 1 hits)
|
|
|
422 </a></div>
|
|
|
423 <div class=indexentry><a href="#match4">
|
|
|
424 Query_1: Forward_Primer|NOST-Spec_(Genetic_ID)
|
|
|
425 (20 letters, 0 hits)
|
|
|
426 </a></div>
|
|
|
427 <div class=indexentry><a href="#match5">
|
|
|
428 Query_1: Forward_Primer|NOST-Spec_(Genetic_ID)
|
|
|
429 (20 letters, 0 hits)
|
|
|
430 </a></div>
|
|
|
431 <div class=indexentry><a href="#match6">
|
|
|
432 Query_1: Forward_Primer|NOST-Spec_(Genetic_ID)
|
|
|
433 (20 letters, 1 hits)
|
|
|
434 </a></div>
|
|
|
435 <div class=indexentry><a href="#match7">
|
|
|
436 Query_1: Forward_Primer|NOST-Spec_(Genetic_ID)
|
|
|
437 (20 letters, 0 hits)
|
|
|
438 </a></div>
|
|
|
439 <div class=indexentry><a href="#match8">
|
|
|
440 Query_1: Forward_Primer|NOST-Spec_(Genetic_ID)
|
|
|
441 (20 letters, 0 hits)
|
|
|
442 </a></div>
|
|
|
443 <div class=indexentry><a href="#match9">
|
|
|
444 Query_2: Reverse_Primer|NOST-Spec_(Genetic_ID)
|
|
|
445 (20 letters, 0 hits)
|
|
|
446 </a></div>
|
|
|
447 <div class=indexentry><a href="#match10">
|
|
|
448 Query_2: Reverse_Primer|NOST-Spec_(Genetic_ID)
|
|
|
449 (20 letters, 0 hits)
|
|
|
450 </a></div>
|
|
|
451 <div class=indexentry><a href="#match11">
|
|
|
452 Query_2: Reverse_Primer|NOST-Spec_(Genetic_ID)
|
|
|
453 (20 letters, 0 hits)
|
|
|
454 </a></div>
|
|
|
455 <div class=indexentry><a href="#match12">
|
|
|
456 Query_2: Reverse_Primer|NOST-Spec_(Genetic_ID)
|
|
|
457 (20 letters, 0 hits)
|
|
|
458 </a></div>
|
|
|
459 <div class=indexentry><a href="#match13">
|
|
|
460 Query_2: Reverse_Primer|NOST-Spec_(Genetic_ID)
|
|
|
461 (20 letters, 0 hits)
|
|
|
462 </a></div>
|
|
|
463 <div class=indexentry><a href="#match14">
|
|
|
464 Query_2: Reverse_Primer|NOST-Spec_(Genetic_ID)
|
|
|
465 (20 letters, 0 hits)
|
|
|
466 </a></div>
|
|
|
467 <div class=indexentry><a href="#match15">
|
|
|
468 Query_2: Reverse_Primer|NOST-Spec_(Genetic_ID)
|
|
|
469 (20 letters, 0 hits)
|
|
|
470 </a></div>
|
|
|
471 <div class=indexentry><a href="#match16">
|
|
|
472 Query_2: Reverse_Primer|NOST-Spec_(Genetic_ID)
|
|
|
473 (20 letters, 0 hits)
|
|
|
474 </a></div>
|
|
|
475 <div class=indexentry><a href="#match17">
|
|
|
476 Query_3: Probe|NOST-Spec_(Genetic_ID)
|
|
|
477 (20 letters, 0 hits)
|
|
|
478 </a></div>
|
|
|
479 <div class=indexentry><a href="#match18">
|
|
|
480 Query_3: Probe|NOST-Spec_(Genetic_ID)
|
|
|
481 (20 letters, 1 hits)
|
|
|
482 </a></div>
|
|
|
483 <div class=indexentry><a href="#match19">
|
|
|
484 Query_3: Probe|NOST-Spec_(Genetic_ID)
|
|
|
485 (20 letters, 1 hits)
|
|
|
486 </a></div>
|
|
|
487 <div class=indexentry><a href="#match20">
|
|
|
488 Query_3: Probe|NOST-Spec_(Genetic_ID)
|
|
|
489 (20 letters, 0 hits)
|
|
|
490 </a></div>
|
|
|
491 <div class=indexentry><a href="#match21">
|
|
|
492 Query_3: Probe|NOST-Spec_(Genetic_ID)
|
|
|
493 (20 letters, 0 hits)
|
|
|
494 </a></div>
|
|
|
495 <div class=indexentry><a href="#match22">
|
|
|
496 Query_3: Probe|NOST-Spec_(Genetic_ID)
|
|
|
497 (20 letters, 1 hits)
|
|
|
498 </a></div>
|
|
|
499 <div class=indexentry><a href="#match23">
|
|
|
500 Query_3: Probe|NOST-Spec_(Genetic_ID)
|
|
|
501 (20 letters, 0 hits)
|
|
|
502 </a></div>
|
|
|
503 <div class=indexentry><a href="#match24">
|
|
|
504 Query_3: Probe|NOST-Spec_(Genetic_ID)
|
|
|
505 (20 letters, 0 hits)
|
|
|
506 </a></div>
|
|
|
507 <div class=indexentry><a href="#match25">
|
|
|
508 Query_4: Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
509 (24 letters, 0 hits)
|
|
|
510 </a></div>
|
|
|
511 <div class=indexentry><a href="#match26">
|
|
|
512 Query_4: Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
513 (24 letters, 0 hits)
|
|
|
514 </a></div>
|
|
|
515 <div class=indexentry><a href="#match27">
|
|
|
516 Query_4: Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
517 (24 letters, 0 hits)
|
|
|
518 </a></div>
|
|
|
519 <div class=indexentry><a href="#match28">
|
|
|
520 Query_4: Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
521 (24 letters, 0 hits)
|
|
|
522 </a></div>
|
|
|
523 <div class=indexentry><a href="#match29">
|
|
|
524 Query_4: Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
525 (24 letters, 0 hits)
|
|
|
526 </a></div>
|
|
|
527 <div class=indexentry><a href="#match30">
|
|
|
528 Query_4: Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
529 (24 letters, 0 hits)
|
|
|
530 </a></div>
|
|
|
531 <div class=indexentry><a href="#match31">
|
|
|
532 Query_4: Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
533 (24 letters, 0 hits)
|
|
|
534 </a></div>
|
|
|
535 <div class=indexentry><a href="#match32">
|
|
|
536 Query_4: Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
537 (24 letters, 0 hits)
|
|
|
538 </a></div>
|
|
|
539 <div class=indexentry><a href="#match33">
|
|
|
540 Query_5: Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
541 (20 letters, 0 hits)
|
|
|
542 </a></div>
|
|
|
543 <div class=indexentry><a href="#match34">
|
|
|
544 Query_5: Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
545 (20 letters, 0 hits)
|
|
|
546 </a></div>
|
|
|
547 <div class=indexentry><a href="#match35">
|
|
|
548 Query_5: Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
549 (20 letters, 0 hits)
|
|
|
550 </a></div>
|
|
|
551 <div class=indexentry><a href="#match36">
|
|
|
552 Query_5: Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
553 (20 letters, 0 hits)
|
|
|
554 </a></div>
|
|
|
555 <div class=indexentry><a href="#match37">
|
|
|
556 Query_5: Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
557 (20 letters, 0 hits)
|
|
|
558 </a></div>
|
|
|
559 <div class=indexentry><a href="#match38">
|
|
|
560 Query_5: Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
561 (20 letters, 0 hits)
|
|
|
562 </a></div>
|
|
|
563 <div class=indexentry><a href="#match39">
|
|
|
564 Query_5: Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
565 (20 letters, 0 hits)
|
|
|
566 </a></div>
|
|
|
567 <div class=indexentry><a href="#match40">
|
|
|
568 Query_5: Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
569 (20 letters, 0 hits)
|
|
|
570 </a></div>
|
|
|
571 <div class=indexentry><a href="#match41">
|
|
|
572 Query_6: Probe|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
573 (25 letters, 0 hits)
|
|
|
574 </a></div>
|
|
|
575 <div class=indexentry><a href="#match42">
|
|
|
576 Query_6: Probe|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
577 (25 letters, 0 hits)
|
|
|
578 </a></div>
|
|
|
579 <div class=indexentry><a href="#match43">
|
|
|
580 Query_6: Probe|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
581 (25 letters, 0 hits)
|
|
|
582 </a></div>
|
|
|
583 <div class=indexentry><a href="#match44">
|
|
|
584 Query_6: Probe|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
585 (25 letters, 0 hits)
|
|
|
586 </a></div>
|
|
|
587 <div class=indexentry><a href="#match45">
|
|
|
588 Query_6: Probe|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
589 (25 letters, 0 hits)
|
|
|
590 </a></div>
|
|
|
591 <div class=indexentry><a href="#match46">
|
|
|
592 Query_6: Probe|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
593 (25 letters, 0 hits)
|
|
|
594 </a></div>
|
|
|
595 <div class=indexentry><a href="#match47">
|
|
|
596 Query_6: Probe|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
597 (25 letters, 1 hits)
|
|
|
598 </a></div>
|
|
|
599 <div class=indexentry><a href="#match48">
|
|
|
600 Query_6: Probe|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
601 (25 letters, 1 hits)
|
|
|
602 </a></div>
|
|
|
603 <div class=indexentry><a href="#match49">
|
|
|
604 Query_7: Amplicon|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
605 (74 letters, 0 hits)
|
|
|
606 </a></div>
|
|
|
607 <div class=indexentry><a href="#match50">
|
|
|
608 Query_7: Amplicon|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
609 (74 letters, 0 hits)
|
|
|
610 </a></div>
|
|
|
611 <div class=indexentry><a href="#match51">
|
|
|
612 Query_7: Amplicon|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
613 (74 letters, 0 hits)
|
|
|
614 </a></div>
|
|
|
615 <div class=indexentry><a href="#match52">
|
|
|
616 Query_7: Amplicon|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
617 (74 letters, 0 hits)
|
|
|
618 </a></div>
|
|
|
619 <div class=indexentry><a href="#match53">
|
|
|
620 Query_7: Amplicon|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
621 (74 letters, 0 hits)
|
|
|
622 </a></div>
|
|
|
623 <div class=indexentry><a href="#match54">
|
|
|
624 Query_7: Amplicon|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
625 (74 letters, 0 hits)
|
|
|
626 </a></div>
|
|
|
627 <div class=indexentry><a href="#match55">
|
|
|
628 Query_7: Amplicon|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
629 (74 letters, 1 hits)
|
|
|
630 </a></div>
|
|
|
631 <div class=indexentry><a href="#match56">
|
|
|
632 Query_7: Amplicon|QL-ELE-Bt-F1(mod)/Bt-R
|
|
|
633 (74 letters, 1 hits)
|
|
|
634 </a></div>
|
|
|
635
|
|
|
636 </section>
|
|
|
637
|
|
|
638
|
|
|
639 <section class=match id=match1>
|
|
|
640
|
|
114
|
641 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
642
|
|
|
643 <section class=header>
|
|
|
644
|
|
|
645 <table class=headerdata>
|
|
114
|
646 <tr><td class=param>Query number:</td><td>1</td></tr>
|
|
106
|
647 <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
|
|
114
|
648 <tr><td class=param>Definition line:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
649 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
650 </table>
|
|
|
651
|
|
|
652 </section>
|
|
|
653
|
|
|
654 <section>
|
|
114
|
655 <h3>No Hits</h3>
|
|
106
|
656 <div class=grey>
|
|
|
657 <table class=headerdata>
|
|
|
658 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
659 </table>
|
|
|
660 </div>
|
|
|
661 </section>
|
|
|
662 </section>
|
|
|
663
|
|
|
664 <section class=match id=match2>
|
|
|
665
|
|
114
|
666 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
667
|
|
|
668 <section class=header>
|
|
|
669
|
|
|
670 <table class=headerdata>
|
|
114
|
671 <tr><td class=param>Query number:</td><td>2</td></tr>
|
|
106
|
672 <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
|
|
114
|
673 <tr><td class=param>Definition line:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
674 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
675 </table>
|
|
|
676
|
|
|
677 </section>
|
|
|
678
|
|
|
679 <section>
|
|
114
|
680 <h3>No Hits</h3>
|
|
106
|
681 <div class=grey>
|
|
|
682 <table class=headerdata>
|
|
|
683 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
684 </table>
|
|
|
685 </div>
|
|
|
686 </section>
|
|
|
687 </section>
|
|
|
688
|
|
|
689 <section class=match id=match3>
|
|
|
690
|
|
114
|
691 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
692
|
|
|
693 <section class=header>
|
|
|
694
|
|
|
695 <table class=headerdata>
|
|
114
|
696 <tr><td class=param>Query number:</td><td>3</td></tr>
|
|
106
|
697 <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
|
|
114
|
698 <tr><td class=param>Definition line:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
699 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
700 </table>
|
|
|
701
|
|
|
702 </section>
|
|
|
703
|
|
|
704
|
|
|
705 <section class=graphics>
|
|
114
|
706 <h3>Graphic Summary</h3>
|
|
106
|
707
|
|
|
708 <div class=grey>
|
|
114
|
709 <h4 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h4>
|
|
106
|
710
|
|
|
711 <div class=defline id=defline3>
|
|
|
712 Mouse-over to show defline and scores, click to show alignments
|
|
|
713 </div>
|
|
|
714
|
|
|
715 <div class=graphic>
|
|
114
|
716 <h5 class=darkHeader>Color key for alignment scores</h5>
|
|
106
|
717 <div class=legend><div class=graphicrow>
|
|
|
718 <div class=graphicitem style="background-color: black"><40</div>
|
|
|
719 <div class=graphicitem style="background-color: blue">40–50</div>
|
|
|
720 <div class=graphicitem style="background-color: green">50–80</div>
|
|
|
721 <div class=graphicitem style="background-color: magenta">80–200</div>
|
|
|
722 <div class=graphicitem style="background-color: red">200≤</div>
|
|
|
723 </div></div>
|
|
|
724 <div style="clear: left"></div>
|
|
|
725
|
|
|
726 <div class=tablewrapper>
|
|
|
727
|
|
|
728 <div class=scale>
|
|
|
729 <div>query:</div>
|
|
|
730 <div class=graphicrow>
|
|
|
731 <div>
|
|
|
732 <div class=graphicitem style="width: 10%">
|
|
|
733 <div>2</div>
|
|
|
734 </div>
|
|
|
735 <div class=graphicitem style="width: 10%">
|
|
|
736 <div>4</div>
|
|
|
737 </div>
|
|
|
738 <div class=graphicitem style="width: 10%">
|
|
|
739 <div>6</div>
|
|
|
740 </div>
|
|
|
741 <div class=graphicitem style="width: 10%">
|
|
|
742 <div>8</div>
|
|
|
743 </div>
|
|
|
744 <div class=graphicitem style="width: 10%">
|
|
|
745 <div>10</div>
|
|
|
746 </div>
|
|
|
747 <div class=graphicitem style="width: 10%">
|
|
|
748 <div>12</div>
|
|
|
749 </div>
|
|
|
750 <div class=graphicitem style="width: 10%">
|
|
|
751 <div>14</div>
|
|
|
752 </div>
|
|
|
753 <div class=graphicitem style="width: 10%">
|
|
|
754 <div>16</div>
|
|
|
755 </div>
|
|
|
756 <div class=graphicitem style="width: 10%">
|
|
|
757 <div>18</div>
|
|
|
758 </div>
|
|
|
759 <div class=graphicitem style="width: 10%">
|
|
|
760 <div>20</div>
|
|
|
761 </div>
|
|
|
762 </div>
|
|
|
763 </div>
|
|
|
764 <div style="clear: left"></div>
|
|
|
765 </div>
|
|
|
766
|
|
|
767 <a class=matchresult
|
|
|
768 href="#hit3-1"
|
|
|
769 onmouseover='document.getElementById("defline3").innerHTML="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000"'
|
|
|
770 onmouseout='document.getElementById("defline3").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
|
|
|
771 title="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000">
|
|
|
772 <div class="matchrow graphicrow">
|
|
|
773 <div class="matchitem graphicitem"
|
|
|
774 style="background-color: black; width: 100%"></div>
|
|
|
775 </div>
|
|
|
776 </a>
|
|
|
777
|
|
|
778 </div>
|
|
|
779 </div>
|
|
|
780 </div>
|
|
|
781 </section>
|
|
|
782
|
|
|
783
|
|
|
784
|
|
|
785 <section class=descriptions>
|
|
114
|
786 <h3>Descriptions</h3>
|
|
106
|
787
|
|
|
788 <div class=grey><div class=white>
|
|
114
|
789 <h5 class=darkHeader>Sequences producing significant alignments:</h5>
|
|
106
|
790
|
|
|
791 <table class=descriptiontable>
|
|
|
792 <col/><col/><col/><col/><col/><col/><col/>
|
|
|
793 <tr>
|
|
|
794 <th>Description</th>
|
|
|
795 <th>Max score</th>
|
|
|
796 <th>Total score</th>
|
|
|
797 <th>Query cover</th>
|
|
|
798 <th>E value</th>
|
|
|
799 <th>Ident</th>
|
|
|
800 <th>Accession</th>
|
|
|
801 </tr>
|
|
|
802 <tr>
|
|
|
803 <td><div><a href="#hit3-1"
|
|
|
804 title="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000"
|
|
|
805 id="description3-1">
|
|
|
806 DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000
|
|
|
807 </a></div></td>
|
|
|
808 <td>37.4</td>
|
|
|
809 <td>37.4</td>
|
|
|
810 <td>100%</td>
|
|
|
811 <td>7.011e-08</td>
|
|
|
812 <td>100%</td>
|
|
|
813 <td><a href="http://example.com/example-genebank?id=Subject_3">Subject_3</a></td>
|
|
|
814 </tr>
|
|
|
815 </table>
|
|
|
816
|
|
|
817 </div></div>
|
|
|
818 </section>
|
|
|
819
|
|
|
820
|
|
|
821
|
|
|
822 <section class=alignments>
|
|
114
|
823 <h3>Alignments</h3>
|
|
106
|
824
|
|
|
825 <div class=grey><div class=white>
|
|
|
826 <div class=alignment id=hit3-1>
|
|
|
827
|
|
|
828 <div class=linkheader>
|
|
|
829 <div class=right><a href="#description3-1">Descriptions</a></div>
|
|
|
830 <a class="linkheader" href="http://example.com/example-genebank?id=Subject_3">Gene Bank</a>
|
|
|
831 </div>
|
|
|
832
|
|
|
833 <div class=title>
|
|
|
834 <p class=hittitle>DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000</p>
|
|
|
835 <p class=titleinfo>
|
|
|
836 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank?id=Subject_3">Subject_3</a>
|
|
|
837 <span class=b>Length:</span> 323
|
|
|
838 <span class=b>Number of Matches:</span> 1
|
|
|
839 </p>
|
|
|
840 </div>
|
|
|
841
|
|
|
842
|
|
|
843 <div class=hotspot id=hotspot3-1-1>
|
|
|
844 <p class=range>
|
|
|
845 <span class=range>Range 1: 200 to 219</span>
|
|
|
846 </p>
|
|
|
847
|
|
|
848 <table class=hotspotstable>
|
|
|
849 <tr>
|
|
|
850 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
|
|
|
851 </tr>
|
|
|
852 <tr>
|
|
|
853 <td>37.4 bits(40)</td>
|
|
|
854 <td>0.0</td>
|
|
|
855 <td>20/20(100%)</td>
|
|
|
856 <td>0/20(0%)</td>
|
|
|
857 <td>Plus/Plus</td>
|
|
|
858 </tr>
|
|
|
859 </table>
|
|
|
860
|
|
|
861 <pre class=alignmentgraphic>Query 1 AGCGCGCAAACTAGGATAAA 20
|
|
|
862 ||||||||||||||||||||
|
|
|
863 Subject 200 AGCGCGCAAACTAGGATAAA 219</pre>
|
|
|
864 </div>
|
|
|
865
|
|
|
866 </div>
|
|
|
867
|
|
|
868 </div></div>
|
|
|
869 </section>
|
|
|
870 </section>
|
|
|
871
|
|
|
872 <section class=match id=match4>
|
|
|
873
|
|
114
|
874 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
875
|
|
|
876 <section class=header>
|
|
|
877
|
|
|
878 <table class=headerdata>
|
|
114
|
879 <tr><td class=param>Query number:</td><td>4</td></tr>
|
|
106
|
880 <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
|
|
114
|
881 <tr><td class=param>Definition line:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
882 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
883 </table>
|
|
|
884
|
|
|
885 </section>
|
|
|
886
|
|
|
887 <section>
|
|
114
|
888 <h3>No Hits</h3>
|
|
106
|
889 <div class=grey>
|
|
|
890 <table class=headerdata>
|
|
|
891 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
892 </table>
|
|
|
893 </div>
|
|
|
894 </section>
|
|
|
895 </section>
|
|
|
896
|
|
|
897 <section class=match id=match5>
|
|
|
898
|
|
114
|
899 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
900
|
|
|
901 <section class=header>
|
|
|
902
|
|
|
903 <table class=headerdata>
|
|
114
|
904 <tr><td class=param>Query number:</td><td>5</td></tr>
|
|
106
|
905 <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
|
|
114
|
906 <tr><td class=param>Definition line:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
907 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
908 </table>
|
|
|
909
|
|
|
910 </section>
|
|
|
911
|
|
|
912 <section>
|
|
114
|
913 <h3>No Hits</h3>
|
|
106
|
914 <div class=grey>
|
|
|
915 <table class=headerdata>
|
|
|
916 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
917 </table>
|
|
|
918 </div>
|
|
|
919 </section>
|
|
|
920 </section>
|
|
|
921
|
|
|
922 <section class=match id=match6>
|
|
|
923
|
|
114
|
924 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
925
|
|
|
926 <section class=header>
|
|
|
927
|
|
|
928 <table class=headerdata>
|
|
114
|
929 <tr><td class=param>Query number:</td><td>6</td></tr>
|
|
106
|
930 <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
|
|
114
|
931 <tr><td class=param>Definition line:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
932 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
933 </table>
|
|
|
934
|
|
|
935 </section>
|
|
|
936
|
|
|
937
|
|
|
938 <section class=graphics>
|
|
114
|
939 <h3>Graphic Summary</h3>
|
|
106
|
940
|
|
|
941 <div class=grey>
|
|
114
|
942 <h4 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h4>
|
|
106
|
943
|
|
|
944 <div class=defline id=defline6>
|
|
|
945 Mouse-over to show defline and scores, click to show alignments
|
|
|
946 </div>
|
|
|
947
|
|
|
948 <div class=graphic>
|
|
114
|
949 <h5 class=darkHeader>Color key for alignment scores</h5>
|
|
106
|
950 <div class=legend><div class=graphicrow>
|
|
|
951 <div class=graphicitem style="background-color: black"><40</div>
|
|
|
952 <div class=graphicitem style="background-color: blue">40–50</div>
|
|
|
953 <div class=graphicitem style="background-color: green">50–80</div>
|
|
|
954 <div class=graphicitem style="background-color: magenta">80–200</div>
|
|
|
955 <div class=graphicitem style="background-color: red">200≤</div>
|
|
|
956 </div></div>
|
|
|
957 <div style="clear: left"></div>
|
|
|
958
|
|
|
959 <div class=tablewrapper>
|
|
|
960
|
|
|
961 <div class=scale>
|
|
|
962 <div>query:</div>
|
|
|
963 <div class=graphicrow>
|
|
|
964 <div>
|
|
|
965 <div class=graphicitem style="width: 10%">
|
|
|
966 <div>2</div>
|
|
|
967 </div>
|
|
|
968 <div class=graphicitem style="width: 10%">
|
|
|
969 <div>4</div>
|
|
|
970 </div>
|
|
|
971 <div class=graphicitem style="width: 10%">
|
|
|
972 <div>6</div>
|
|
|
973 </div>
|
|
|
974 <div class=graphicitem style="width: 10%">
|
|
|
975 <div>8</div>
|
|
|
976 </div>
|
|
|
977 <div class=graphicitem style="width: 10%">
|
|
|
978 <div>10</div>
|
|
|
979 </div>
|
|
|
980 <div class=graphicitem style="width: 10%">
|
|
|
981 <div>12</div>
|
|
|
982 </div>
|
|
|
983 <div class=graphicitem style="width: 10%">
|
|
|
984 <div>14</div>
|
|
|
985 </div>
|
|
|
986 <div class=graphicitem style="width: 10%">
|
|
|
987 <div>16</div>
|
|
|
988 </div>
|
|
|
989 <div class=graphicitem style="width: 10%">
|
|
|
990 <div>18</div>
|
|
|
991 </div>
|
|
|
992 <div class=graphicitem style="width: 10%">
|
|
|
993 <div>20</div>
|
|
|
994 </div>
|
|
|
995 </div>
|
|
|
996 </div>
|
|
|
997 <div style="clear: left"></div>
|
|
|
998 </div>
|
|
|
999
|
|
|
1000 <a class=matchresult
|
|
|
1001 href="#hit6-1"
|
|
|
1002 onmouseover='document.getElementById("defline6").innerHTML="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000"'
|
|
|
1003 onmouseout='document.getElementById("defline6").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
|
|
|
1004 title="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000">
|
|
|
1005 <div class="matchrow graphicrow">
|
|
|
1006 <div class="matchitem graphicitem"
|
|
|
1007 style="background-color: black; width: 100%"></div>
|
|
|
1008 </div>
|
|
|
1009 </a>
|
|
|
1010
|
|
|
1011 </div>
|
|
|
1012 </div>
|
|
|
1013 </div>
|
|
|
1014 </section>
|
|
|
1015
|
|
|
1016
|
|
|
1017
|
|
|
1018 <section class=descriptions>
|
|
114
|
1019 <h3>Descriptions</h3>
|
|
106
|
1020
|
|
|
1021 <div class=grey><div class=white>
|
|
114
|
1022 <h5 class=darkHeader>Sequences producing significant alignments:</h5>
|
|
106
|
1023
|
|
|
1024 <table class=descriptiontable>
|
|
|
1025 <col/><col/><col/><col/><col/><col/><col/>
|
|
|
1026 <tr>
|
|
|
1027 <th>Description</th>
|
|
|
1028 <th>Max score</th>
|
|
|
1029 <th>Total score</th>
|
|
|
1030 <th>Query cover</th>
|
|
|
1031 <th>E value</th>
|
|
|
1032 <th>Ident</th>
|
|
|
1033 <th>Accession</th>
|
|
|
1034 </tr>
|
|
|
1035 <tr>
|
|
|
1036 <td><div><a href="#hit6-1"
|
|
|
1037 title="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000"
|
|
|
1038 id="description6-1">
|
|
|
1039 AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000
|
|
|
1040 </a></div></td>
|
|
|
1041 <td>37.4</td>
|
|
|
1042 <td>37.4</td>
|
|
|
1043 <td>100%</td>
|
|
|
1044 <td>7.011e-08</td>
|
|
|
1045 <td>100%</td>
|
|
|
1046 <td><a href="http://example.com/example-genebank?id=Subject_6">Subject_6</a></td>
|
|
|
1047 </tr>
|
|
|
1048 </table>
|
|
|
1049
|
|
|
1050 </div></div>
|
|
|
1051 </section>
|
|
|
1052
|
|
|
1053
|
|
|
1054
|
|
|
1055 <section class=alignments>
|
|
114
|
1056 <h3>Alignments</h3>
|
|
106
|
1057
|
|
|
1058 <div class=grey><div class=white>
|
|
|
1059 <div class=alignment id=hit6-1>
|
|
|
1060
|
|
|
1061 <div class=linkheader>
|
|
|
1062 <div class=right><a href="#description6-1">Descriptions</a></div>
|
|
|
1063 <a class="linkheader" href="http://example.com/example-genebank?id=Subject_6">Gene Bank</a>
|
|
|
1064 </div>
|
|
|
1065
|
|
|
1066 <div class=title>
|
|
|
1067 <p class=hittitle>AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000</p>
|
|
|
1068 <p class=titleinfo>
|
|
|
1069 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank?id=Subject_6">Subject_6</a>
|
|
|
1070 <span class=b>Length:</span> 2457
|
|
|
1071 <span class=b>Number of Matches:</span> 1
|
|
|
1072 </p>
|
|
|
1073 </div>
|
|
|
1074
|
|
|
1075
|
|
|
1076 <div class=hotspot id=hotspot6-1-1>
|
|
|
1077 <p class=range>
|
|
|
1078 <span class=range>Range 1: 2119 to 2138</span>
|
|
|
1079 </p>
|
|
|
1080
|
|
|
1081 <table class=hotspotstable>
|
|
|
1082 <tr>
|
|
|
1083 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
|
|
|
1084 </tr>
|
|
|
1085 <tr>
|
|
|
1086 <td>37.4 bits(40)</td>
|
|
|
1087 <td>0.0</td>
|
|
|
1088 <td>20/20(100%)</td>
|
|
|
1089 <td>0/20(0%)</td>
|
|
|
1090 <td>Plus/Plus</td>
|
|
|
1091 </tr>
|
|
|
1092 </table>
|
|
|
1093
|
|
|
1094 <pre class=alignmentgraphic>Query 1 AGCGCGCAAACTAGGATAAA 20
|
|
|
1095 ||||||||||||||||||||
|
|
|
1096 Subject 2119 AGCGCGCAAACTAGGATAAA 2138</pre>
|
|
|
1097 </div>
|
|
|
1098
|
|
|
1099 </div>
|
|
|
1100
|
|
|
1101 </div></div>
|
|
|
1102 </section>
|
|
|
1103 </section>
|
|
|
1104
|
|
|
1105 <section class=match id=match7>
|
|
|
1106
|
|
114
|
1107 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
1108
|
|
|
1109 <section class=header>
|
|
|
1110
|
|
|
1111 <table class=headerdata>
|
|
114
|
1112 <tr><td class=param>Query number:</td><td>7</td></tr>
|
|
106
|
1113 <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
|
|
114
|
1114 <tr><td class=param>Definition line:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
1115 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
1116 </table>
|
|
|
1117
|
|
|
1118 </section>
|
|
|
1119
|
|
|
1120 <section>
|
|
114
|
1121 <h3>No Hits</h3>
|
|
106
|
1122 <div class=grey>
|
|
|
1123 <table class=headerdata>
|
|
|
1124 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
1125 </table>
|
|
|
1126 </div>
|
|
|
1127 </section>
|
|
|
1128 </section>
|
|
|
1129
|
|
|
1130 <section class=match id=match8>
|
|
|
1131
|
|
114
|
1132 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
1133
|
|
|
1134 <section class=header>
|
|
|
1135
|
|
|
1136 <table class=headerdata>
|
|
114
|
1137 <tr><td class=param>Query number:</td><td>8</td></tr>
|
|
106
|
1138 <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
|
|
114
|
1139 <tr><td class=param>Definition line:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
1140 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
1141 </table>
|
|
|
1142
|
|
|
1143 </section>
|
|
|
1144
|
|
|
1145 <section>
|
|
114
|
1146 <h3>No Hits</h3>
|
|
106
|
1147 <div class=grey>
|
|
|
1148 <table class=headerdata>
|
|
|
1149 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
1150 </table>
|
|
|
1151 </div>
|
|
|
1152 </section>
|
|
|
1153 </section>
|
|
|
1154
|
|
|
1155 <section class=match id=match9>
|
|
|
1156
|
|
114
|
1157 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
1158
|
|
|
1159 <section class=header>
|
|
|
1160
|
|
|
1161 <table class=headerdata>
|
|
114
|
1162 <tr><td class=param>Query number:</td><td>9</td></tr>
|
|
|
1163 <tr><td class=param>Query ID:</td><td>Query_2</td></tr>
|
|
|
1164 <tr><td class=param>Definition line:</td><td>Reverse_Primer|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
1165 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
1166 </table>
|
|
|
1167
|
|
|
1168 </section>
|
|
|
1169
|
|
|
1170 <section>
|
|
114
|
1171 <h3>No Hits</h3>
|
|
106
|
1172 <div class=grey>
|
|
|
1173 <table class=headerdata>
|
|
|
1174 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
1175 </table>
|
|
|
1176 </div>
|
|
|
1177 </section>
|
|
|
1178 </section>
|
|
|
1179
|
|
|
1180 <section class=match id=match10>
|
|
|
1181
|
|
114
|
1182 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
1183
|
|
|
1184 <section class=header>
|
|
|
1185
|
|
|
1186 <table class=headerdata>
|
|
114
|
1187 <tr><td class=param>Query number:</td><td>10</td></tr>
|
|
|
1188 <tr><td class=param>Query ID:</td><td>Query_2</td></tr>
|
|
|
1189 <tr><td class=param>Definition line:</td><td>Reverse_Primer|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
1190 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
1191 </table>
|
|
|
1192
|
|
|
1193 </section>
|
|
|
1194
|
|
|
1195 <section>
|
|
114
|
1196 <h3>No Hits</h3>
|
|
106
|
1197 <div class=grey>
|
|
|
1198 <table class=headerdata>
|
|
|
1199 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
1200 </table>
|
|
|
1201 </div>
|
|
|
1202 </section>
|
|
|
1203 </section>
|
|
|
1204
|
|
|
1205 <section class=match id=match11>
|
|
|
1206
|
|
114
|
1207 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
1208
|
|
|
1209 <section class=header>
|
|
|
1210
|
|
|
1211 <table class=headerdata>
|
|
114
|
1212 <tr><td class=param>Query number:</td><td>11</td></tr>
|
|
|
1213 <tr><td class=param>Query ID:</td><td>Query_2</td></tr>
|
|
|
1214 <tr><td class=param>Definition line:</td><td>Reverse_Primer|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
1215 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
1216 </table>
|
|
|
1217
|
|
|
1218 </section>
|
|
|
1219
|
|
|
1220 <section>
|
|
114
|
1221 <h3>No Hits</h3>
|
|
106
|
1222 <div class=grey>
|
|
|
1223 <table class=headerdata>
|
|
|
1224 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
1225 </table>
|
|
|
1226 </div>
|
|
|
1227 </section>
|
|
|
1228 </section>
|
|
|
1229
|
|
|
1230 <section class=match id=match12>
|
|
|
1231
|
|
114
|
1232 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
1233
|
|
|
1234 <section class=header>
|
|
|
1235
|
|
|
1236 <table class=headerdata>
|
|
114
|
1237 <tr><td class=param>Query number:</td><td>12</td></tr>
|
|
|
1238 <tr><td class=param>Query ID:</td><td>Query_2</td></tr>
|
|
|
1239 <tr><td class=param>Definition line:</td><td>Reverse_Primer|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
1240 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
1241 </table>
|
|
|
1242
|
|
|
1243 </section>
|
|
|
1244
|
|
|
1245 <section>
|
|
114
|
1246 <h3>No Hits</h3>
|
|
106
|
1247 <div class=grey>
|
|
|
1248 <table class=headerdata>
|
|
|
1249 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
1250 </table>
|
|
|
1251 </div>
|
|
|
1252 </section>
|
|
|
1253 </section>
|
|
|
1254
|
|
|
1255 <section class=match id=match13>
|
|
|
1256
|
|
114
|
1257 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
1258
|
|
|
1259 <section class=header>
|
|
|
1260
|
|
|
1261 <table class=headerdata>
|
|
114
|
1262 <tr><td class=param>Query number:</td><td>13</td></tr>
|
|
|
1263 <tr><td class=param>Query ID:</td><td>Query_2</td></tr>
|
|
|
1264 <tr><td class=param>Definition line:</td><td>Reverse_Primer|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
1265 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
1266 </table>
|
|
|
1267
|
|
|
1268 </section>
|
|
|
1269
|
|
|
1270 <section>
|
|
114
|
1271 <h3>No Hits</h3>
|
|
106
|
1272 <div class=grey>
|
|
|
1273 <table class=headerdata>
|
|
|
1274 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
1275 </table>
|
|
|
1276 </div>
|
|
|
1277 </section>
|
|
|
1278 </section>
|
|
|
1279
|
|
|
1280 <section class=match id=match14>
|
|
|
1281
|
|
114
|
1282 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
1283
|
|
|
1284 <section class=header>
|
|
|
1285
|
|
|
1286 <table class=headerdata>
|
|
114
|
1287 <tr><td class=param>Query number:</td><td>14</td></tr>
|
|
|
1288 <tr><td class=param>Query ID:</td><td>Query_2</td></tr>
|
|
|
1289 <tr><td class=param>Definition line:</td><td>Reverse_Primer|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
1290 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
1291 </table>
|
|
|
1292
|
|
|
1293 </section>
|
|
|
1294
|
|
|
1295 <section>
|
|
114
|
1296 <h3>No Hits</h3>
|
|
106
|
1297 <div class=grey>
|
|
|
1298 <table class=headerdata>
|
|
|
1299 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
1300 </table>
|
|
|
1301 </div>
|
|
|
1302 </section>
|
|
|
1303 </section>
|
|
|
1304
|
|
|
1305 <section class=match id=match15>
|
|
|
1306
|
|
114
|
1307 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
1308
|
|
|
1309 <section class=header>
|
|
|
1310
|
|
|
1311 <table class=headerdata>
|
|
114
|
1312 <tr><td class=param>Query number:</td><td>15</td></tr>
|
|
|
1313 <tr><td class=param>Query ID:</td><td>Query_2</td></tr>
|
|
|
1314 <tr><td class=param>Definition line:</td><td>Reverse_Primer|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
1315 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
1316 </table>
|
|
|
1317
|
|
|
1318 </section>
|
|
|
1319
|
|
|
1320 <section>
|
|
114
|
1321 <h3>No Hits</h3>
|
|
106
|
1322 <div class=grey>
|
|
|
1323 <table class=headerdata>
|
|
|
1324 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
1325 </table>
|
|
|
1326 </div>
|
|
|
1327 </section>
|
|
|
1328 </section>
|
|
|
1329
|
|
|
1330 <section class=match id=match16>
|
|
|
1331
|
|
114
|
1332 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
1333
|
|
|
1334 <section class=header>
|
|
|
1335
|
|
|
1336 <table class=headerdata>
|
|
114
|
1337 <tr><td class=param>Query number:</td><td>16</td></tr>
|
|
|
1338 <tr><td class=param>Query ID:</td><td>Query_2</td></tr>
|
|
|
1339 <tr><td class=param>Definition line:</td><td>Reverse_Primer|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
1340 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
1341 </table>
|
|
|
1342
|
|
|
1343 </section>
|
|
|
1344
|
|
|
1345 <section>
|
|
114
|
1346 <h3>No Hits</h3>
|
|
106
|
1347 <div class=grey>
|
|
|
1348 <table class=headerdata>
|
|
|
1349 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
1350 </table>
|
|
|
1351 </div>
|
|
|
1352 </section>
|
|
|
1353 </section>
|
|
|
1354
|
|
|
1355 <section class=match id=match17>
|
|
|
1356
|
|
114
|
1357 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
1358
|
|
|
1359 <section class=header>
|
|
|
1360
|
|
|
1361 <table class=headerdata>
|
|
114
|
1362 <tr><td class=param>Query number:</td><td>17</td></tr>
|
|
|
1363 <tr><td class=param>Query ID:</td><td>Query_3</td></tr>
|
|
|
1364 <tr><td class=param>Definition line:</td><td>Probe|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
1365 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
1366 </table>
|
|
|
1367
|
|
|
1368 </section>
|
|
|
1369
|
|
|
1370 <section>
|
|
114
|
1371 <h3>No Hits</h3>
|
|
106
|
1372 <div class=grey>
|
|
|
1373 <table class=headerdata>
|
|
|
1374 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
1375 </table>
|
|
|
1376 </div>
|
|
|
1377 </section>
|
|
|
1378 </section>
|
|
|
1379
|
|
|
1380 <section class=match id=match18>
|
|
|
1381
|
|
114
|
1382 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
1383
|
|
|
1384 <section class=header>
|
|
|
1385
|
|
|
1386 <table class=headerdata>
|
|
114
|
1387 <tr><td class=param>Query number:</td><td>18</td></tr>
|
|
|
1388 <tr><td class=param>Query ID:</td><td>Query_3</td></tr>
|
|
|
1389 <tr><td class=param>Definition line:</td><td>Probe|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
1390 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
1391 </table>
|
|
|
1392
|
|
|
1393 </section>
|
|
|
1394
|
|
|
1395
|
|
|
1396 <section class=graphics>
|
|
114
|
1397 <h3>Graphic Summary</h3>
|
|
106
|
1398
|
|
|
1399 <div class=grey>
|
|
114
|
1400 <h4 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h4>
|
|
106
|
1401
|
|
|
1402 <div class=defline id=defline18>
|
|
|
1403 Mouse-over to show defline and scores, click to show alignments
|
|
|
1404 </div>
|
|
|
1405
|
|
|
1406 <div class=graphic>
|
|
114
|
1407 <h5 class=darkHeader>Color key for alignment scores</h5>
|
|
106
|
1408 <div class=legend><div class=graphicrow>
|
|
|
1409 <div class=graphicitem style="background-color: black"><40</div>
|
|
|
1410 <div class=graphicitem style="background-color: blue">40–50</div>
|
|
|
1411 <div class=graphicitem style="background-color: green">50–80</div>
|
|
|
1412 <div class=graphicitem style="background-color: magenta">80–200</div>
|
|
|
1413 <div class=graphicitem style="background-color: red">200≤</div>
|
|
|
1414 </div></div>
|
|
|
1415 <div style="clear: left"></div>
|
|
|
1416
|
|
|
1417 <div class=tablewrapper>
|
|
|
1418
|
|
|
1419 <div class=scale>
|
|
|
1420 <div>query:</div>
|
|
|
1421 <div class=graphicrow>
|
|
|
1422 <div>
|
|
|
1423 <div class=graphicitem style="width: 10%">
|
|
|
1424 <div>2</div>
|
|
|
1425 </div>
|
|
|
1426 <div class=graphicitem style="width: 10%">
|
|
|
1427 <div>4</div>
|
|
|
1428 </div>
|
|
|
1429 <div class=graphicitem style="width: 10%">
|
|
|
1430 <div>6</div>
|
|
|
1431 </div>
|
|
|
1432 <div class=graphicitem style="width: 10%">
|
|
|
1433 <div>8</div>
|
|
|
1434 </div>
|
|
|
1435 <div class=graphicitem style="width: 10%">
|
|
|
1436 <div>10</div>
|
|
|
1437 </div>
|
|
|
1438 <div class=graphicitem style="width: 10%">
|
|
|
1439 <div>12</div>
|
|
|
1440 </div>
|
|
|
1441 <div class=graphicitem style="width: 10%">
|
|
|
1442 <div>14</div>
|
|
|
1443 </div>
|
|
|
1444 <div class=graphicitem style="width: 10%">
|
|
|
1445 <div>16</div>
|
|
|
1446 </div>
|
|
|
1447 <div class=graphicitem style="width: 10%">
|
|
|
1448 <div>18</div>
|
|
|
1449 </div>
|
|
|
1450 <div class=graphicitem style="width: 10%">
|
|
|
1451 <div>20</div>
|
|
|
1452 </div>
|
|
|
1453 </div>
|
|
|
1454 </div>
|
|
|
1455 <div style="clear: left"></div>
|
|
|
1456 </div>
|
|
|
1457
|
|
|
1458 <a class=matchresult
|
|
|
1459 href="#hit18-1"
|
|
|
1460 onmouseover='document.getElementById("defline18").innerHTML="AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3\u0027UTR/plant_junction_region.|-9105899556052450000"'
|
|
|
1461 onmouseout='document.getElementById("defline18").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
|
|
|
1462 title="AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3'UTR/plant_junction_region.|-9105899556052450000">
|
|
|
1463 <div class="matchrow graphicrow">
|
|
|
1464 <div class="matchitem graphicitem"
|
|
|
1465 style="background-color: transparent; width: 15%"></div>
|
|
|
1466 <div class="matchitem graphicitem"
|
|
|
1467 style="background-color: black; width: 85%"></div>
|
|
|
1468 </div>
|
|
|
1469 </a>
|
|
|
1470
|
|
|
1471 </div>
|
|
|
1472 </div>
|
|
|
1473 </div>
|
|
|
1474 </section>
|
|
|
1475
|
|
|
1476
|
|
|
1477
|
|
|
1478 <section class=descriptions>
|
|
114
|
1479 <h3>Descriptions</h3>
|
|
106
|
1480
|
|
|
1481 <div class=grey><div class=white>
|
|
114
|
1482 <h5 class=darkHeader>Sequences producing significant alignments:</h5>
|
|
106
|
1483
|
|
|
1484 <table class=descriptiontable>
|
|
|
1485 <col/><col/><col/><col/><col/><col/><col/>
|
|
|
1486 <tr>
|
|
|
1487 <th>Description</th>
|
|
|
1488 <th>Max score</th>
|
|
|
1489 <th>Total score</th>
|
|
|
1490 <th>Query cover</th>
|
|
|
1491 <th>E value</th>
|
|
|
1492 <th>Ident</th>
|
|
|
1493 <th>Accession</th>
|
|
|
1494 </tr>
|
|
|
1495 <tr>
|
|
|
1496 <td><div><a href="#hit18-1"
|
|
|
1497 title="AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3'UTR/plant_junction_region.|-9105899556052450000"
|
|
|
1498 id="description18-1">
|
|
|
1499 AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3'UTR/plant_junction_region.|-9105899556052450000
|
|
|
1500 </a></div></td>
|
|
|
1501 <td>31.9</td>
|
|
|
1502 <td>31.9</td>
|
|
|
1503 <td>85%</td>
|
|
|
1504 <td>2.981e-06</td>
|
|
|
1505 <td>100%</td>
|
|
|
1506 <td><a href="http://example.com/example-genebank?id=Subject_2">Subject_2</a></td>
|
|
|
1507 </tr>
|
|
|
1508 </table>
|
|
|
1509
|
|
|
1510 </div></div>
|
|
|
1511 </section>
|
|
|
1512
|
|
|
1513
|
|
|
1514
|
|
|
1515 <section class=alignments>
|
|
114
|
1516 <h3>Alignments</h3>
|
|
106
|
1517
|
|
|
1518 <div class=grey><div class=white>
|
|
|
1519 <div class=alignment id=hit18-1>
|
|
|
1520
|
|
|
1521 <div class=linkheader>
|
|
|
1522 <div class=right><a href="#description18-1">Descriptions</a></div>
|
|
|
1523 <a class="linkheader" href="http://example.com/example-genebank?id=Subject_2">Gene Bank</a>
|
|
|
1524 </div>
|
|
|
1525
|
|
|
1526 <div class=title>
|
|
|
1527 <p class=hittitle>AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3'UTR/plant_junction_region.|-9105899556052450000</p>
|
|
|
1528 <p class=titleinfo>
|
|
|
1529 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank?id=Subject_2">Subject_2</a>
|
|
|
1530 <span class=b>Length:</span> 1045
|
|
|
1531 <span class=b>Number of Matches:</span> 1
|
|
|
1532 </p>
|
|
|
1533 </div>
|
|
|
1534
|
|
|
1535
|
|
|
1536 <div class=hotspot id=hotspot18-1-1>
|
|
|
1537 <p class=range>
|
|
|
1538 <span class=range>Range 1: 2 to 18</span>
|
|
|
1539 </p>
|
|
|
1540
|
|
|
1541 <table class=hotspotstable>
|
|
|
1542 <tr>
|
|
|
1543 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
|
|
|
1544 </tr>
|
|
|
1545 <tr>
|
|
|
1546 <td>31.9 bits(34)</td>
|
|
|
1547 <td>0.0</td>
|
|
|
1548 <td>17/17(100%)</td>
|
|
|
1549 <td>0/17(0%)</td>
|
|
|
1550 <td>Plus/Plus</td>
|
|
|
1551 </tr>
|
|
|
1552 </table>
|
|
|
1553
|
|
|
1554 <pre class=alignmentgraphic>Query 4 GCGCGGTGTCATCTATG 20
|
|
|
1555 |||||||||||||||||
|
|
|
1556 Subject 2 GCGCGGTGTCATCTATG 18</pre>
|
|
|
1557 </div>
|
|
|
1558
|
|
|
1559 </div>
|
|
|
1560
|
|
|
1561 </div></div>
|
|
|
1562 </section>
|
|
|
1563 </section>
|
|
|
1564
|
|
|
1565 <section class=match id=match19>
|
|
|
1566
|
|
114
|
1567 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
1568
|
|
|
1569 <section class=header>
|
|
|
1570
|
|
|
1571 <table class=headerdata>
|
|
114
|
1572 <tr><td class=param>Query number:</td><td>19</td></tr>
|
|
|
1573 <tr><td class=param>Query ID:</td><td>Query_3</td></tr>
|
|
|
1574 <tr><td class=param>Definition line:</td><td>Probe|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
1575 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
1576 </table>
|
|
|
1577
|
|
|
1578 </section>
|
|
|
1579
|
|
|
1580
|
|
|
1581 <section class=graphics>
|
|
114
|
1582 <h3>Graphic Summary</h3>
|
|
106
|
1583
|
|
|
1584 <div class=grey>
|
|
114
|
1585 <h4 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h4>
|
|
106
|
1586
|
|
|
1587 <div class=defline id=defline19>
|
|
|
1588 Mouse-over to show defline and scores, click to show alignments
|
|
|
1589 </div>
|
|
|
1590
|
|
|
1591 <div class=graphic>
|
|
114
|
1592 <h5 class=darkHeader>Color key for alignment scores</h5>
|
|
106
|
1593 <div class=legend><div class=graphicrow>
|
|
|
1594 <div class=graphicitem style="background-color: black"><40</div>
|
|
|
1595 <div class=graphicitem style="background-color: blue">40–50</div>
|
|
|
1596 <div class=graphicitem style="background-color: green">50–80</div>
|
|
|
1597 <div class=graphicitem style="background-color: magenta">80–200</div>
|
|
|
1598 <div class=graphicitem style="background-color: red">200≤</div>
|
|
|
1599 </div></div>
|
|
|
1600 <div style="clear: left"></div>
|
|
|
1601
|
|
|
1602 <div class=tablewrapper>
|
|
|
1603
|
|
|
1604 <div class=scale>
|
|
|
1605 <div>query:</div>
|
|
|
1606 <div class=graphicrow>
|
|
|
1607 <div>
|
|
|
1608 <div class=graphicitem style="width: 10%">
|
|
|
1609 <div>2</div>
|
|
|
1610 </div>
|
|
|
1611 <div class=graphicitem style="width: 10%">
|
|
|
1612 <div>4</div>
|
|
|
1613 </div>
|
|
|
1614 <div class=graphicitem style="width: 10%">
|
|
|
1615 <div>6</div>
|
|
|
1616 </div>
|
|
|
1617 <div class=graphicitem style="width: 10%">
|
|
|
1618 <div>8</div>
|
|
|
1619 </div>
|
|
|
1620 <div class=graphicitem style="width: 10%">
|
|
|
1621 <div>10</div>
|
|
|
1622 </div>
|
|
|
1623 <div class=graphicitem style="width: 10%">
|
|
|
1624 <div>12</div>
|
|
|
1625 </div>
|
|
|
1626 <div class=graphicitem style="width: 10%">
|
|
|
1627 <div>14</div>
|
|
|
1628 </div>
|
|
|
1629 <div class=graphicitem style="width: 10%">
|
|
|
1630 <div>16</div>
|
|
|
1631 </div>
|
|
|
1632 <div class=graphicitem style="width: 10%">
|
|
|
1633 <div>18</div>
|
|
|
1634 </div>
|
|
|
1635 <div class=graphicitem style="width: 10%">
|
|
|
1636 <div>20</div>
|
|
|
1637 </div>
|
|
|
1638 </div>
|
|
|
1639 </div>
|
|
|
1640 <div style="clear: left"></div>
|
|
|
1641 </div>
|
|
|
1642
|
|
|
1643 <a class=matchresult
|
|
|
1644 href="#hit19-1"
|
|
|
1645 onmouseover='document.getElementById("defline19").innerHTML="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000"'
|
|
|
1646 onmouseout='document.getElementById("defline19").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
|
|
|
1647 title="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000">
|
|
|
1648 <div class="matchrow graphicrow">
|
|
|
1649 <div class="matchitem graphicitem"
|
|
|
1650 style="background-color: black; width: 100%"></div>
|
|
|
1651 </div>
|
|
|
1652 </a>
|
|
|
1653
|
|
|
1654 </div>
|
|
|
1655 </div>
|
|
|
1656 </div>
|
|
|
1657 </section>
|
|
|
1658
|
|
|
1659
|
|
|
1660
|
|
|
1661 <section class=descriptions>
|
|
114
|
1662 <h3>Descriptions</h3>
|
|
106
|
1663
|
|
|
1664 <div class=grey><div class=white>
|
|
114
|
1665 <h5 class=darkHeader>Sequences producing significant alignments:</h5>
|
|
106
|
1666
|
|
|
1667 <table class=descriptiontable>
|
|
|
1668 <col/><col/><col/><col/><col/><col/><col/>
|
|
|
1669 <tr>
|
|
|
1670 <th>Description</th>
|
|
|
1671 <th>Max score</th>
|
|
|
1672 <th>Total score</th>
|
|
|
1673 <th>Query cover</th>
|
|
|
1674 <th>E value</th>
|
|
|
1675 <th>Ident</th>
|
|
|
1676 <th>Accession</th>
|
|
|
1677 </tr>
|
|
|
1678 <tr>
|
|
|
1679 <td><div><a href="#hit19-1"
|
|
|
1680 title="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000"
|
|
|
1681 id="description19-1">
|
|
|
1682 DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000
|
|
|
1683 </a></div></td>
|
|
|
1684 <td>37.4</td>
|
|
|
1685 <td>37.4</td>
|
|
|
1686 <td>100%</td>
|
|
|
1687 <td>7.011e-08</td>
|
|
|
1688 <td>100%</td>
|
|
|
1689 <td><a href="http://example.com/example-genebank?id=Subject_3">Subject_3</a></td>
|
|
|
1690 </tr>
|
|
|
1691 </table>
|
|
|
1692
|
|
|
1693 </div></div>
|
|
|
1694 </section>
|
|
|
1695
|
|
|
1696
|
|
|
1697
|
|
|
1698 <section class=alignments>
|
|
114
|
1699 <h3>Alignments</h3>
|
|
106
|
1700
|
|
|
1701 <div class=grey><div class=white>
|
|
|
1702 <div class=alignment id=hit19-1>
|
|
|
1703
|
|
|
1704 <div class=linkheader>
|
|
|
1705 <div class=right><a href="#description19-1">Descriptions</a></div>
|
|
|
1706 <a class="linkheader" href="http://example.com/example-genebank?id=Subject_3">Gene Bank</a>
|
|
|
1707 </div>
|
|
|
1708
|
|
|
1709 <div class=title>
|
|
|
1710 <p class=hittitle>DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000</p>
|
|
|
1711 <p class=titleinfo>
|
|
|
1712 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank?id=Subject_3">Subject_3</a>
|
|
|
1713 <span class=b>Length:</span> 323
|
|
|
1714 <span class=b>Number of Matches:</span> 1
|
|
|
1715 </p>
|
|
|
1716 </div>
|
|
|
1717
|
|
|
1718
|
|
|
1719 <div class=hotspot id=hotspot19-1-1>
|
|
|
1720 <p class=range>
|
|
|
1721 <span class=range>Range 1: 224 to 243</span>
|
|
|
1722 </p>
|
|
|
1723
|
|
|
1724 <table class=hotspotstable>
|
|
|
1725 <tr>
|
|
|
1726 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
|
|
|
1727 </tr>
|
|
|
1728 <tr>
|
|
|
1729 <td>37.4 bits(40)</td>
|
|
|
1730 <td>0.0</td>
|
|
|
1731 <td>20/20(100%)</td>
|
|
|
1732 <td>0/20(0%)</td>
|
|
|
1733 <td>Plus/Plus</td>
|
|
|
1734 </tr>
|
|
|
1735 </table>
|
|
|
1736
|
|
|
1737 <pre class=alignmentgraphic>Query 1 CGCGCGCGGTGTCATCTATG 20
|
|
|
1738 ||||||||||||||||||||
|
|
|
1739 Subject 224 CGCGCGCGGTGTCATCTATG 243</pre>
|
|
|
1740 </div>
|
|
|
1741
|
|
|
1742 </div>
|
|
|
1743
|
|
|
1744 </div></div>
|
|
|
1745 </section>
|
|
|
1746 </section>
|
|
|
1747
|
|
|
1748 <section class=match id=match20>
|
|
|
1749
|
|
114
|
1750 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
1751
|
|
|
1752 <section class=header>
|
|
|
1753
|
|
|
1754 <table class=headerdata>
|
|
114
|
1755 <tr><td class=param>Query number:</td><td>20</td></tr>
|
|
|
1756 <tr><td class=param>Query ID:</td><td>Query_3</td></tr>
|
|
|
1757 <tr><td class=param>Definition line:</td><td>Probe|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
1758 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
1759 </table>
|
|
|
1760
|
|
|
1761 </section>
|
|
|
1762
|
|
|
1763 <section>
|
|
114
|
1764 <h3>No Hits</h3>
|
|
106
|
1765 <div class=grey>
|
|
|
1766 <table class=headerdata>
|
|
|
1767 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
1768 </table>
|
|
|
1769 </div>
|
|
|
1770 </section>
|
|
|
1771 </section>
|
|
|
1772
|
|
|
1773 <section class=match id=match21>
|
|
|
1774
|
|
114
|
1775 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
1776
|
|
|
1777 <section class=header>
|
|
|
1778
|
|
|
1779 <table class=headerdata>
|
|
114
|
1780 <tr><td class=param>Query number:</td><td>21</td></tr>
|
|
|
1781 <tr><td class=param>Query ID:</td><td>Query_3</td></tr>
|
|
|
1782 <tr><td class=param>Definition line:</td><td>Probe|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
1783 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
1784 </table>
|
|
|
1785
|
|
|
1786 </section>
|
|
|
1787
|
|
|
1788 <section>
|
|
114
|
1789 <h3>No Hits</h3>
|
|
106
|
1790 <div class=grey>
|
|
|
1791 <table class=headerdata>
|
|
|
1792 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
1793 </table>
|
|
|
1794 </div>
|
|
|
1795 </section>
|
|
|
1796 </section>
|
|
|
1797
|
|
|
1798 <section class=match id=match22>
|
|
|
1799
|
|
114
|
1800 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
1801
|
|
|
1802 <section class=header>
|
|
|
1803
|
|
|
1804 <table class=headerdata>
|
|
114
|
1805 <tr><td class=param>Query number:</td><td>22</td></tr>
|
|
|
1806 <tr><td class=param>Query ID:</td><td>Query_3</td></tr>
|
|
|
1807 <tr><td class=param>Definition line:</td><td>Probe|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
1808 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
1809 </table>
|
|
|
1810
|
|
|
1811 </section>
|
|
|
1812
|
|
|
1813
|
|
|
1814 <section class=graphics>
|
|
114
|
1815 <h3>Graphic Summary</h3>
|
|
106
|
1816
|
|
|
1817 <div class=grey>
|
|
114
|
1818 <h4 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h4>
|
|
106
|
1819
|
|
|
1820 <div class=defline id=defline22>
|
|
|
1821 Mouse-over to show defline and scores, click to show alignments
|
|
|
1822 </div>
|
|
|
1823
|
|
|
1824 <div class=graphic>
|
|
114
|
1825 <h5 class=darkHeader>Color key for alignment scores</h5>
|
|
106
|
1826 <div class=legend><div class=graphicrow>
|
|
|
1827 <div class=graphicitem style="background-color: black"><40</div>
|
|
|
1828 <div class=graphicitem style="background-color: blue">40–50</div>
|
|
|
1829 <div class=graphicitem style="background-color: green">50–80</div>
|
|
|
1830 <div class=graphicitem style="background-color: magenta">80–200</div>
|
|
|
1831 <div class=graphicitem style="background-color: red">200≤</div>
|
|
|
1832 </div></div>
|
|
|
1833 <div style="clear: left"></div>
|
|
|
1834
|
|
|
1835 <div class=tablewrapper>
|
|
|
1836
|
|
|
1837 <div class=scale>
|
|
|
1838 <div>query:</div>
|
|
|
1839 <div class=graphicrow>
|
|
|
1840 <div>
|
|
|
1841 <div class=graphicitem style="width: 10%">
|
|
|
1842 <div>2</div>
|
|
|
1843 </div>
|
|
|
1844 <div class=graphicitem style="width: 10%">
|
|
|
1845 <div>4</div>
|
|
|
1846 </div>
|
|
|
1847 <div class=graphicitem style="width: 10%">
|
|
|
1848 <div>6</div>
|
|
|
1849 </div>
|
|
|
1850 <div class=graphicitem style="width: 10%">
|
|
|
1851 <div>8</div>
|
|
|
1852 </div>
|
|
|
1853 <div class=graphicitem style="width: 10%">
|
|
|
1854 <div>10</div>
|
|
|
1855 </div>
|
|
|
1856 <div class=graphicitem style="width: 10%">
|
|
|
1857 <div>12</div>
|
|
|
1858 </div>
|
|
|
1859 <div class=graphicitem style="width: 10%">
|
|
|
1860 <div>14</div>
|
|
|
1861 </div>
|
|
|
1862 <div class=graphicitem style="width: 10%">
|
|
|
1863 <div>16</div>
|
|
|
1864 </div>
|
|
|
1865 <div class=graphicitem style="width: 10%">
|
|
|
1866 <div>18</div>
|
|
|
1867 </div>
|
|
|
1868 <div class=graphicitem style="width: 10%">
|
|
|
1869 <div>20</div>
|
|
|
1870 </div>
|
|
|
1871 </div>
|
|
|
1872 </div>
|
|
|
1873 <div style="clear: left"></div>
|
|
|
1874 </div>
|
|
|
1875
|
|
|
1876 <a class=matchresult
|
|
|
1877 href="#hit22-1"
|
|
|
1878 onmouseover='document.getElementById("defline22").innerHTML="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000"'
|
|
|
1879 onmouseout='document.getElementById("defline22").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
|
|
|
1880 title="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000">
|
|
|
1881 <div class="matchrow graphicrow">
|
|
|
1882 <div class="matchitem graphicitem"
|
|
|
1883 style="background-color: black; width: 100%"></div>
|
|
|
1884 </div>
|
|
|
1885 </a>
|
|
|
1886
|
|
|
1887 </div>
|
|
|
1888 </div>
|
|
|
1889 </div>
|
|
|
1890 </section>
|
|
|
1891
|
|
|
1892
|
|
|
1893
|
|
|
1894 <section class=descriptions>
|
|
114
|
1895 <h3>Descriptions</h3>
|
|
106
|
1896
|
|
|
1897 <div class=grey><div class=white>
|
|
114
|
1898 <h5 class=darkHeader>Sequences producing significant alignments:</h5>
|
|
106
|
1899
|
|
|
1900 <table class=descriptiontable>
|
|
|
1901 <col/><col/><col/><col/><col/><col/><col/>
|
|
|
1902 <tr>
|
|
|
1903 <th>Description</th>
|
|
|
1904 <th>Max score</th>
|
|
|
1905 <th>Total score</th>
|
|
|
1906 <th>Query cover</th>
|
|
|
1907 <th>E value</th>
|
|
|
1908 <th>Ident</th>
|
|
|
1909 <th>Accession</th>
|
|
|
1910 </tr>
|
|
|
1911 <tr>
|
|
|
1912 <td><div><a href="#hit22-1"
|
|
|
1913 title="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000"
|
|
|
1914 id="description22-1">
|
|
|
1915 AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000
|
|
|
1916 </a></div></td>
|
|
|
1917 <td>37.4</td>
|
|
|
1918 <td>37.4</td>
|
|
|
1919 <td>100%</td>
|
|
|
1920 <td>7.011e-08</td>
|
|
|
1921 <td>100%</td>
|
|
|
1922 <td><a href="http://example.com/example-genebank?id=Subject_6">Subject_6</a></td>
|
|
|
1923 </tr>
|
|
|
1924 </table>
|
|
|
1925
|
|
|
1926 </div></div>
|
|
|
1927 </section>
|
|
|
1928
|
|
|
1929
|
|
|
1930
|
|
|
1931 <section class=alignments>
|
|
114
|
1932 <h3>Alignments</h3>
|
|
106
|
1933
|
|
|
1934 <div class=grey><div class=white>
|
|
|
1935 <div class=alignment id=hit22-1>
|
|
|
1936
|
|
|
1937 <div class=linkheader>
|
|
|
1938 <div class=right><a href="#description22-1">Descriptions</a></div>
|
|
|
1939 <a class="linkheader" href="http://example.com/example-genebank?id=Subject_6">Gene Bank</a>
|
|
|
1940 </div>
|
|
|
1941
|
|
|
1942 <div class=title>
|
|
|
1943 <p class=hittitle>AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000</p>
|
|
|
1944 <p class=titleinfo>
|
|
|
1945 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank?id=Subject_6">Subject_6</a>
|
|
|
1946 <span class=b>Length:</span> 2457
|
|
|
1947 <span class=b>Number of Matches:</span> 1
|
|
|
1948 </p>
|
|
|
1949 </div>
|
|
|
1950
|
|
|
1951
|
|
|
1952 <div class=hotspot id=hotspot22-1-1>
|
|
|
1953 <p class=range>
|
|
|
1954 <span class=range>Range 1: 2143 to 2162</span>
|
|
|
1955 </p>
|
|
|
1956
|
|
|
1957 <table class=hotspotstable>
|
|
|
1958 <tr>
|
|
|
1959 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
|
|
|
1960 </tr>
|
|
|
1961 <tr>
|
|
|
1962 <td>37.4 bits(40)</td>
|
|
|
1963 <td>0.0</td>
|
|
|
1964 <td>20/20(100%)</td>
|
|
|
1965 <td>0/20(0%)</td>
|
|
|
1966 <td>Plus/Plus</td>
|
|
|
1967 </tr>
|
|
|
1968 </table>
|
|
|
1969
|
|
|
1970 <pre class=alignmentgraphic>Query 1 CGCGCGCGGTGTCATCTATG 20
|
|
|
1971 ||||||||||||||||||||
|
|
|
1972 Subject 2143 CGCGCGCGGTGTCATCTATG 2162</pre>
|
|
|
1973 </div>
|
|
|
1974
|
|
|
1975 </div>
|
|
|
1976
|
|
|
1977 </div></div>
|
|
|
1978 </section>
|
|
|
1979 </section>
|
|
|
1980
|
|
|
1981 <section class=match id=match23>
|
|
|
1982
|
|
114
|
1983 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
1984
|
|
|
1985 <section class=header>
|
|
|
1986
|
|
|
1987 <table class=headerdata>
|
|
114
|
1988 <tr><td class=param>Query number:</td><td>23</td></tr>
|
|
|
1989 <tr><td class=param>Query ID:</td><td>Query_3</td></tr>
|
|
|
1990 <tr><td class=param>Definition line:</td><td>Probe|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
1991 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
1992 </table>
|
|
|
1993
|
|
|
1994 </section>
|
|
|
1995
|
|
|
1996 <section>
|
|
114
|
1997 <h3>No Hits</h3>
|
|
106
|
1998 <div class=grey>
|
|
|
1999 <table class=headerdata>
|
|
|
2000 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2001 </table>
|
|
|
2002 </div>
|
|
|
2003 </section>
|
|
|
2004 </section>
|
|
|
2005
|
|
|
2006 <section class=match id=match24>
|
|
|
2007
|
|
114
|
2008 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
2009
|
|
|
2010 <section class=header>
|
|
|
2011
|
|
|
2012 <table class=headerdata>
|
|
114
|
2013 <tr><td class=param>Query number:</td><td>24</td></tr>
|
|
|
2014 <tr><td class=param>Query ID:</td><td>Query_3</td></tr>
|
|
|
2015 <tr><td class=param>Definition line:</td><td>Probe|NOST-Spec_(Genetic_ID)</td></tr>
|
|
|
2016 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
2017 </table>
|
|
|
2018
|
|
|
2019 </section>
|
|
|
2020
|
|
|
2021 <section>
|
|
114
|
2022 <h3>No Hits</h3>
|
|
106
|
2023 <div class=grey>
|
|
|
2024 <table class=headerdata>
|
|
|
2025 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2026 </table>
|
|
|
2027 </div>
|
|
|
2028 </section>
|
|
|
2029 </section>
|
|
|
2030
|
|
|
2031 <section class=match id=match25>
|
|
|
2032
|
|
114
|
2033 <h2>Nucleotide Sequence (24 letters)</h2>
|
|
106
|
2034
|
|
|
2035 <section class=header>
|
|
|
2036
|
|
|
2037 <table class=headerdata>
|
|
114
|
2038 <tr><td class=param>Query number:</td><td>25</td></tr>
|
|
|
2039 <tr><td class=param>Query ID:</td><td>Query_4</td></tr>
|
|
|
2040 <tr><td class=param>Definition line:</td><td>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2041 <tr><td class=param>Length:</td><td>24</td></tr>
|
|
106
|
2042 </table>
|
|
|
2043
|
|
|
2044 </section>
|
|
|
2045
|
|
|
2046 <section>
|
|
114
|
2047 <h3>No Hits</h3>
|
|
106
|
2048 <div class=grey>
|
|
|
2049 <table class=headerdata>
|
|
|
2050 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2051 </table>
|
|
|
2052 </div>
|
|
|
2053 </section>
|
|
|
2054 </section>
|
|
|
2055
|
|
|
2056 <section class=match id=match26>
|
|
|
2057
|
|
114
|
2058 <h2>Nucleotide Sequence (24 letters)</h2>
|
|
106
|
2059
|
|
|
2060 <section class=header>
|
|
|
2061
|
|
|
2062 <table class=headerdata>
|
|
114
|
2063 <tr><td class=param>Query number:</td><td>26</td></tr>
|
|
|
2064 <tr><td class=param>Query ID:</td><td>Query_4</td></tr>
|
|
|
2065 <tr><td class=param>Definition line:</td><td>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2066 <tr><td class=param>Length:</td><td>24</td></tr>
|
|
106
|
2067 </table>
|
|
|
2068
|
|
|
2069 </section>
|
|
|
2070
|
|
|
2071 <section>
|
|
114
|
2072 <h3>No Hits</h3>
|
|
106
|
2073 <div class=grey>
|
|
|
2074 <table class=headerdata>
|
|
|
2075 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2076 </table>
|
|
|
2077 </div>
|
|
|
2078 </section>
|
|
|
2079 </section>
|
|
|
2080
|
|
|
2081 <section class=match id=match27>
|
|
|
2082
|
|
114
|
2083 <h2>Nucleotide Sequence (24 letters)</h2>
|
|
106
|
2084
|
|
|
2085 <section class=header>
|
|
|
2086
|
|
|
2087 <table class=headerdata>
|
|
114
|
2088 <tr><td class=param>Query number:</td><td>27</td></tr>
|
|
|
2089 <tr><td class=param>Query ID:</td><td>Query_4</td></tr>
|
|
|
2090 <tr><td class=param>Definition line:</td><td>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2091 <tr><td class=param>Length:</td><td>24</td></tr>
|
|
106
|
2092 </table>
|
|
|
2093
|
|
|
2094 </section>
|
|
|
2095
|
|
|
2096 <section>
|
|
114
|
2097 <h3>No Hits</h3>
|
|
106
|
2098 <div class=grey>
|
|
|
2099 <table class=headerdata>
|
|
|
2100 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2101 </table>
|
|
|
2102 </div>
|
|
|
2103 </section>
|
|
|
2104 </section>
|
|
|
2105
|
|
|
2106 <section class=match id=match28>
|
|
|
2107
|
|
114
|
2108 <h2>Nucleotide Sequence (24 letters)</h2>
|
|
106
|
2109
|
|
|
2110 <section class=header>
|
|
|
2111
|
|
|
2112 <table class=headerdata>
|
|
114
|
2113 <tr><td class=param>Query number:</td><td>28</td></tr>
|
|
|
2114 <tr><td class=param>Query ID:</td><td>Query_4</td></tr>
|
|
|
2115 <tr><td class=param>Definition line:</td><td>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2116 <tr><td class=param>Length:</td><td>24</td></tr>
|
|
106
|
2117 </table>
|
|
|
2118
|
|
|
2119 </section>
|
|
|
2120
|
|
|
2121 <section>
|
|
114
|
2122 <h3>No Hits</h3>
|
|
106
|
2123 <div class=grey>
|
|
|
2124 <table class=headerdata>
|
|
|
2125 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2126 </table>
|
|
|
2127 </div>
|
|
|
2128 </section>
|
|
|
2129 </section>
|
|
|
2130
|
|
|
2131 <section class=match id=match29>
|
|
|
2132
|
|
114
|
2133 <h2>Nucleotide Sequence (24 letters)</h2>
|
|
106
|
2134
|
|
|
2135 <section class=header>
|
|
|
2136
|
|
|
2137 <table class=headerdata>
|
|
114
|
2138 <tr><td class=param>Query number:</td><td>29</td></tr>
|
|
|
2139 <tr><td class=param>Query ID:</td><td>Query_4</td></tr>
|
|
|
2140 <tr><td class=param>Definition line:</td><td>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2141 <tr><td class=param>Length:</td><td>24</td></tr>
|
|
106
|
2142 </table>
|
|
|
2143
|
|
|
2144 </section>
|
|
|
2145
|
|
|
2146 <section>
|
|
114
|
2147 <h3>No Hits</h3>
|
|
106
|
2148 <div class=grey>
|
|
|
2149 <table class=headerdata>
|
|
|
2150 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2151 </table>
|
|
|
2152 </div>
|
|
|
2153 </section>
|
|
|
2154 </section>
|
|
|
2155
|
|
|
2156 <section class=match id=match30>
|
|
|
2157
|
|
114
|
2158 <h2>Nucleotide Sequence (24 letters)</h2>
|
|
106
|
2159
|
|
|
2160 <section class=header>
|
|
|
2161
|
|
|
2162 <table class=headerdata>
|
|
114
|
2163 <tr><td class=param>Query number:</td><td>30</td></tr>
|
|
|
2164 <tr><td class=param>Query ID:</td><td>Query_4</td></tr>
|
|
|
2165 <tr><td class=param>Definition line:</td><td>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2166 <tr><td class=param>Length:</td><td>24</td></tr>
|
|
106
|
2167 </table>
|
|
|
2168
|
|
|
2169 </section>
|
|
|
2170
|
|
|
2171 <section>
|
|
114
|
2172 <h3>No Hits</h3>
|
|
106
|
2173 <div class=grey>
|
|
|
2174 <table class=headerdata>
|
|
|
2175 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2176 </table>
|
|
|
2177 </div>
|
|
|
2178 </section>
|
|
|
2179 </section>
|
|
|
2180
|
|
|
2181 <section class=match id=match31>
|
|
|
2182
|
|
114
|
2183 <h2>Nucleotide Sequence (24 letters)</h2>
|
|
106
|
2184
|
|
|
2185 <section class=header>
|
|
|
2186
|
|
|
2187 <table class=headerdata>
|
|
114
|
2188 <tr><td class=param>Query number:</td><td>31</td></tr>
|
|
|
2189 <tr><td class=param>Query ID:</td><td>Query_4</td></tr>
|
|
|
2190 <tr><td class=param>Definition line:</td><td>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2191 <tr><td class=param>Length:</td><td>24</td></tr>
|
|
106
|
2192 </table>
|
|
|
2193
|
|
|
2194 </section>
|
|
|
2195
|
|
|
2196 <section>
|
|
114
|
2197 <h3>No Hits</h3>
|
|
106
|
2198 <div class=grey>
|
|
|
2199 <table class=headerdata>
|
|
|
2200 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2201 </table>
|
|
|
2202 </div>
|
|
|
2203 </section>
|
|
|
2204 </section>
|
|
|
2205
|
|
|
2206 <section class=match id=match32>
|
|
|
2207
|
|
114
|
2208 <h2>Nucleotide Sequence (24 letters)</h2>
|
|
106
|
2209
|
|
|
2210 <section class=header>
|
|
|
2211
|
|
|
2212 <table class=headerdata>
|
|
114
|
2213 <tr><td class=param>Query number:</td><td>32</td></tr>
|
|
|
2214 <tr><td class=param>Query ID:</td><td>Query_4</td></tr>
|
|
|
2215 <tr><td class=param>Definition line:</td><td>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2216 <tr><td class=param>Length:</td><td>24</td></tr>
|
|
106
|
2217 </table>
|
|
|
2218
|
|
|
2219 </section>
|
|
|
2220
|
|
|
2221 <section>
|
|
114
|
2222 <h3>No Hits</h3>
|
|
106
|
2223 <div class=grey>
|
|
|
2224 <table class=headerdata>
|
|
|
2225 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2226 </table>
|
|
|
2227 </div>
|
|
|
2228 </section>
|
|
|
2229 </section>
|
|
|
2230
|
|
|
2231 <section class=match id=match33>
|
|
|
2232
|
|
114
|
2233 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
2234
|
|
|
2235 <section class=header>
|
|
|
2236
|
|
|
2237 <table class=headerdata>
|
|
114
|
2238 <tr><td class=param>Query number:</td><td>33</td></tr>
|
|
|
2239 <tr><td class=param>Query ID:</td><td>Query_5</td></tr>
|
|
|
2240 <tr><td class=param>Definition line:</td><td>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2241 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
2242 </table>
|
|
|
2243
|
|
|
2244 </section>
|
|
|
2245
|
|
|
2246 <section>
|
|
114
|
2247 <h3>No Hits</h3>
|
|
106
|
2248 <div class=grey>
|
|
|
2249 <table class=headerdata>
|
|
|
2250 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2251 </table>
|
|
|
2252 </div>
|
|
|
2253 </section>
|
|
|
2254 </section>
|
|
|
2255
|
|
|
2256 <section class=match id=match34>
|
|
|
2257
|
|
114
|
2258 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
2259
|
|
|
2260 <section class=header>
|
|
|
2261
|
|
|
2262 <table class=headerdata>
|
|
114
|
2263 <tr><td class=param>Query number:</td><td>34</td></tr>
|
|
|
2264 <tr><td class=param>Query ID:</td><td>Query_5</td></tr>
|
|
|
2265 <tr><td class=param>Definition line:</td><td>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2266 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
2267 </table>
|
|
|
2268
|
|
|
2269 </section>
|
|
|
2270
|
|
|
2271 <section>
|
|
114
|
2272 <h3>No Hits</h3>
|
|
106
|
2273 <div class=grey>
|
|
|
2274 <table class=headerdata>
|
|
|
2275 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2276 </table>
|
|
|
2277 </div>
|
|
|
2278 </section>
|
|
|
2279 </section>
|
|
|
2280
|
|
|
2281 <section class=match id=match35>
|
|
|
2282
|
|
114
|
2283 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
2284
|
|
|
2285 <section class=header>
|
|
|
2286
|
|
|
2287 <table class=headerdata>
|
|
114
|
2288 <tr><td class=param>Query number:</td><td>35</td></tr>
|
|
|
2289 <tr><td class=param>Query ID:</td><td>Query_5</td></tr>
|
|
|
2290 <tr><td class=param>Definition line:</td><td>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2291 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
2292 </table>
|
|
|
2293
|
|
|
2294 </section>
|
|
|
2295
|
|
|
2296 <section>
|
|
114
|
2297 <h3>No Hits</h3>
|
|
106
|
2298 <div class=grey>
|
|
|
2299 <table class=headerdata>
|
|
|
2300 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2301 </table>
|
|
|
2302 </div>
|
|
|
2303 </section>
|
|
|
2304 </section>
|
|
|
2305
|
|
|
2306 <section class=match id=match36>
|
|
|
2307
|
|
114
|
2308 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
2309
|
|
|
2310 <section class=header>
|
|
|
2311
|
|
|
2312 <table class=headerdata>
|
|
114
|
2313 <tr><td class=param>Query number:</td><td>36</td></tr>
|
|
|
2314 <tr><td class=param>Query ID:</td><td>Query_5</td></tr>
|
|
|
2315 <tr><td class=param>Definition line:</td><td>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2316 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
2317 </table>
|
|
|
2318
|
|
|
2319 </section>
|
|
|
2320
|
|
|
2321 <section>
|
|
114
|
2322 <h3>No Hits</h3>
|
|
106
|
2323 <div class=grey>
|
|
|
2324 <table class=headerdata>
|
|
|
2325 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2326 </table>
|
|
|
2327 </div>
|
|
|
2328 </section>
|
|
|
2329 </section>
|
|
|
2330
|
|
|
2331 <section class=match id=match37>
|
|
|
2332
|
|
114
|
2333 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
2334
|
|
|
2335 <section class=header>
|
|
|
2336
|
|
|
2337 <table class=headerdata>
|
|
114
|
2338 <tr><td class=param>Query number:</td><td>37</td></tr>
|
|
|
2339 <tr><td class=param>Query ID:</td><td>Query_5</td></tr>
|
|
|
2340 <tr><td class=param>Definition line:</td><td>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2341 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
2342 </table>
|
|
|
2343
|
|
|
2344 </section>
|
|
|
2345
|
|
|
2346 <section>
|
|
114
|
2347 <h3>No Hits</h3>
|
|
106
|
2348 <div class=grey>
|
|
|
2349 <table class=headerdata>
|
|
|
2350 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2351 </table>
|
|
|
2352 </div>
|
|
|
2353 </section>
|
|
|
2354 </section>
|
|
|
2355
|
|
|
2356 <section class=match id=match38>
|
|
|
2357
|
|
114
|
2358 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
2359
|
|
|
2360 <section class=header>
|
|
|
2361
|
|
|
2362 <table class=headerdata>
|
|
114
|
2363 <tr><td class=param>Query number:</td><td>38</td></tr>
|
|
|
2364 <tr><td class=param>Query ID:</td><td>Query_5</td></tr>
|
|
|
2365 <tr><td class=param>Definition line:</td><td>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2366 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
2367 </table>
|
|
|
2368
|
|
|
2369 </section>
|
|
|
2370
|
|
|
2371 <section>
|
|
114
|
2372 <h3>No Hits</h3>
|
|
106
|
2373 <div class=grey>
|
|
|
2374 <table class=headerdata>
|
|
|
2375 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2376 </table>
|
|
|
2377 </div>
|
|
|
2378 </section>
|
|
|
2379 </section>
|
|
|
2380
|
|
|
2381 <section class=match id=match39>
|
|
|
2382
|
|
114
|
2383 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
2384
|
|
|
2385 <section class=header>
|
|
|
2386
|
|
|
2387 <table class=headerdata>
|
|
114
|
2388 <tr><td class=param>Query number:</td><td>39</td></tr>
|
|
|
2389 <tr><td class=param>Query ID:</td><td>Query_5</td></tr>
|
|
|
2390 <tr><td class=param>Definition line:</td><td>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2391 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
2392 </table>
|
|
|
2393
|
|
|
2394 </section>
|
|
|
2395
|
|
|
2396 <section>
|
|
114
|
2397 <h3>No Hits</h3>
|
|
106
|
2398 <div class=grey>
|
|
|
2399 <table class=headerdata>
|
|
|
2400 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2401 </table>
|
|
|
2402 </div>
|
|
|
2403 </section>
|
|
|
2404 </section>
|
|
|
2405
|
|
|
2406 <section class=match id=match40>
|
|
|
2407
|
|
114
|
2408 <h2>Nucleotide Sequence (20 letters)</h2>
|
|
106
|
2409
|
|
|
2410 <section class=header>
|
|
|
2411
|
|
|
2412 <table class=headerdata>
|
|
114
|
2413 <tr><td class=param>Query number:</td><td>40</td></tr>
|
|
|
2414 <tr><td class=param>Query ID:</td><td>Query_5</td></tr>
|
|
|
2415 <tr><td class=param>Definition line:</td><td>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2416 <tr><td class=param>Length:</td><td>20</td></tr>
|
|
106
|
2417 </table>
|
|
|
2418
|
|
|
2419 </section>
|
|
|
2420
|
|
|
2421 <section>
|
|
114
|
2422 <h3>No Hits</h3>
|
|
106
|
2423 <div class=grey>
|
|
|
2424 <table class=headerdata>
|
|
|
2425 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2426 </table>
|
|
|
2427 </div>
|
|
|
2428 </section>
|
|
|
2429 </section>
|
|
|
2430
|
|
|
2431 <section class=match id=match41>
|
|
|
2432
|
|
114
|
2433 <h2>Nucleotide Sequence (25 letters)</h2>
|
|
106
|
2434
|
|
|
2435 <section class=header>
|
|
|
2436
|
|
|
2437 <table class=headerdata>
|
|
114
|
2438 <tr><td class=param>Query number:</td><td>41</td></tr>
|
|
|
2439 <tr><td class=param>Query ID:</td><td>Query_6</td></tr>
|
|
|
2440 <tr><td class=param>Definition line:</td><td>Probe|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2441 <tr><td class=param>Length:</td><td>25</td></tr>
|
|
106
|
2442 </table>
|
|
|
2443
|
|
|
2444 </section>
|
|
|
2445
|
|
|
2446 <section>
|
|
114
|
2447 <h3>No Hits</h3>
|
|
106
|
2448 <div class=grey>
|
|
|
2449 <table class=headerdata>
|
|
|
2450 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2451 </table>
|
|
|
2452 </div>
|
|
|
2453 </section>
|
|
|
2454 </section>
|
|
|
2455
|
|
|
2456 <section class=match id=match42>
|
|
|
2457
|
|
114
|
2458 <h2>Nucleotide Sequence (25 letters)</h2>
|
|
106
|
2459
|
|
|
2460 <section class=header>
|
|
|
2461
|
|
|
2462 <table class=headerdata>
|
|
114
|
2463 <tr><td class=param>Query number:</td><td>42</td></tr>
|
|
|
2464 <tr><td class=param>Query ID:</td><td>Query_6</td></tr>
|
|
|
2465 <tr><td class=param>Definition line:</td><td>Probe|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2466 <tr><td class=param>Length:</td><td>25</td></tr>
|
|
106
|
2467 </table>
|
|
|
2468
|
|
|
2469 </section>
|
|
|
2470
|
|
|
2471 <section>
|
|
114
|
2472 <h3>No Hits</h3>
|
|
106
|
2473 <div class=grey>
|
|
|
2474 <table class=headerdata>
|
|
|
2475 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2476 </table>
|
|
|
2477 </div>
|
|
|
2478 </section>
|
|
|
2479 </section>
|
|
|
2480
|
|
|
2481 <section class=match id=match43>
|
|
|
2482
|
|
114
|
2483 <h2>Nucleotide Sequence (25 letters)</h2>
|
|
106
|
2484
|
|
|
2485 <section class=header>
|
|
|
2486
|
|
|
2487 <table class=headerdata>
|
|
114
|
2488 <tr><td class=param>Query number:</td><td>43</td></tr>
|
|
|
2489 <tr><td class=param>Query ID:</td><td>Query_6</td></tr>
|
|
|
2490 <tr><td class=param>Definition line:</td><td>Probe|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2491 <tr><td class=param>Length:</td><td>25</td></tr>
|
|
106
|
2492 </table>
|
|
|
2493
|
|
|
2494 </section>
|
|
|
2495
|
|
|
2496 <section>
|
|
114
|
2497 <h3>No Hits</h3>
|
|
106
|
2498 <div class=grey>
|
|
|
2499 <table class=headerdata>
|
|
|
2500 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2501 </table>
|
|
|
2502 </div>
|
|
|
2503 </section>
|
|
|
2504 </section>
|
|
|
2505
|
|
|
2506 <section class=match id=match44>
|
|
|
2507
|
|
114
|
2508 <h2>Nucleotide Sequence (25 letters)</h2>
|
|
106
|
2509
|
|
|
2510 <section class=header>
|
|
|
2511
|
|
|
2512 <table class=headerdata>
|
|
114
|
2513 <tr><td class=param>Query number:</td><td>44</td></tr>
|
|
|
2514 <tr><td class=param>Query ID:</td><td>Query_6</td></tr>
|
|
|
2515 <tr><td class=param>Definition line:</td><td>Probe|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2516 <tr><td class=param>Length:</td><td>25</td></tr>
|
|
106
|
2517 </table>
|
|
|
2518
|
|
|
2519 </section>
|
|
|
2520
|
|
|
2521 <section>
|
|
114
|
2522 <h3>No Hits</h3>
|
|
106
|
2523 <div class=grey>
|
|
|
2524 <table class=headerdata>
|
|
|
2525 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2526 </table>
|
|
|
2527 </div>
|
|
|
2528 </section>
|
|
|
2529 </section>
|
|
|
2530
|
|
|
2531 <section class=match id=match45>
|
|
|
2532
|
|
114
|
2533 <h2>Nucleotide Sequence (25 letters)</h2>
|
|
106
|
2534
|
|
|
2535 <section class=header>
|
|
|
2536
|
|
|
2537 <table class=headerdata>
|
|
114
|
2538 <tr><td class=param>Query number:</td><td>45</td></tr>
|
|
|
2539 <tr><td class=param>Query ID:</td><td>Query_6</td></tr>
|
|
|
2540 <tr><td class=param>Definition line:</td><td>Probe|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2541 <tr><td class=param>Length:</td><td>25</td></tr>
|
|
106
|
2542 </table>
|
|
|
2543
|
|
|
2544 </section>
|
|
|
2545
|
|
|
2546 <section>
|
|
114
|
2547 <h3>No Hits</h3>
|
|
106
|
2548 <div class=grey>
|
|
|
2549 <table class=headerdata>
|
|
|
2550 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2551 </table>
|
|
|
2552 </div>
|
|
|
2553 </section>
|
|
|
2554 </section>
|
|
|
2555
|
|
|
2556 <section class=match id=match46>
|
|
|
2557
|
|
114
|
2558 <h2>Nucleotide Sequence (25 letters)</h2>
|
|
106
|
2559
|
|
|
2560 <section class=header>
|
|
|
2561
|
|
|
2562 <table class=headerdata>
|
|
114
|
2563 <tr><td class=param>Query number:</td><td>46</td></tr>
|
|
|
2564 <tr><td class=param>Query ID:</td><td>Query_6</td></tr>
|
|
|
2565 <tr><td class=param>Definition line:</td><td>Probe|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2566 <tr><td class=param>Length:</td><td>25</td></tr>
|
|
106
|
2567 </table>
|
|
|
2568
|
|
|
2569 </section>
|
|
|
2570
|
|
|
2571 <section>
|
|
114
|
2572 <h3>No Hits</h3>
|
|
106
|
2573 <div class=grey>
|
|
|
2574 <table class=headerdata>
|
|
|
2575 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2576 </table>
|
|
|
2577 </div>
|
|
|
2578 </section>
|
|
|
2579 </section>
|
|
|
2580
|
|
|
2581 <section class=match id=match47>
|
|
|
2582
|
|
114
|
2583 <h2>Nucleotide Sequence (25 letters)</h2>
|
|
106
|
2584
|
|
|
2585 <section class=header>
|
|
|
2586
|
|
|
2587 <table class=headerdata>
|
|
114
|
2588 <tr><td class=param>Query number:</td><td>47</td></tr>
|
|
|
2589 <tr><td class=param>Query ID:</td><td>Query_6</td></tr>
|
|
|
2590 <tr><td class=param>Definition line:</td><td>Probe|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2591 <tr><td class=param>Length:</td><td>25</td></tr>
|
|
106
|
2592 </table>
|
|
|
2593
|
|
|
2594 </section>
|
|
|
2595
|
|
|
2596
|
|
|
2597 <section class=graphics>
|
|
114
|
2598 <h3>Graphic Summary</h3>
|
|
106
|
2599
|
|
|
2600 <div class=grey>
|
|
114
|
2601 <h4 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h4>
|
|
106
|
2602
|
|
|
2603 <div class=defline id=defline47>
|
|
|
2604 Mouse-over to show defline and scores, click to show alignments
|
|
|
2605 </div>
|
|
|
2606
|
|
|
2607 <div class=graphic>
|
|
114
|
2608 <h5 class=darkHeader>Color key for alignment scores</h5>
|
|
106
|
2609 <div class=legend><div class=graphicrow>
|
|
|
2610 <div class=graphicitem style="background-color: black"><40</div>
|
|
|
2611 <div class=graphicitem style="background-color: blue">40–50</div>
|
|
|
2612 <div class=graphicitem style="background-color: green">50–80</div>
|
|
|
2613 <div class=graphicitem style="background-color: magenta">80–200</div>
|
|
|
2614 <div class=graphicitem style="background-color: red">200≤</div>
|
|
|
2615 </div></div>
|
|
|
2616 <div style="clear: left"></div>
|
|
|
2617
|
|
|
2618 <div class=tablewrapper>
|
|
|
2619
|
|
|
2620 <div class=scale>
|
|
|
2621 <div>query:</div>
|
|
|
2622 <div class=graphicrow>
|
|
|
2623 <div>
|
|
|
2624 <div class=graphicitem style="width: 12%">
|
|
|
2625 <div>3</div>
|
|
|
2626 </div>
|
|
|
2627 <div class=graphicitem style="width: 12%">
|
|
|
2628 <div>6</div>
|
|
|
2629 </div>
|
|
|
2630 <div class=graphicitem style="width: 12%">
|
|
|
2631 <div>9</div>
|
|
|
2632 </div>
|
|
|
2633 <div class=graphicitem style="width: 12%">
|
|
|
2634 <div>12</div>
|
|
|
2635 </div>
|
|
|
2636 <div class=graphicitem style="width: 12%">
|
|
|
2637 <div>15</div>
|
|
|
2638 </div>
|
|
|
2639 <div class=graphicitem style="width: 12%">
|
|
|
2640 <div>18</div>
|
|
|
2641 </div>
|
|
|
2642 <div class=graphicitem style="width: 12%">
|
|
|
2643 <div>21</div>
|
|
|
2644 </div>
|
|
|
2645 <div class=graphicitem style="width: 12%">
|
|
|
2646 <div>24</div>
|
|
|
2647 </div>
|
|
|
2648 <div class=graphicitem style="width: 4%">
|
|
|
2649 <div>25</div>
|
|
|
2650 </div>
|
|
|
2651 </div>
|
|
|
2652 </div>
|
|
|
2653 <div style="clear: left"></div>
|
|
|
2654 </div>
|
|
|
2655
|
|
|
2656 <a class=matchresult
|
|
|
2657 href="#hit47-1"
|
|
|
2658 onmouseover='document.getElementById("defline47").innerHTML="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000"'
|
|
|
2659 onmouseout='document.getElementById("defline47").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
|
|
|
2660 title="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000">
|
|
|
2661 <div class="matchrow graphicrow">
|
|
|
2662 <div class="matchitem graphicitem"
|
|
|
2663 style="background-color: black; width: 100%"></div>
|
|
|
2664 </div>
|
|
|
2665 </a>
|
|
|
2666
|
|
|
2667 </div>
|
|
|
2668 </div>
|
|
|
2669 </div>
|
|
|
2670 </section>
|
|
|
2671
|
|
|
2672
|
|
|
2673
|
|
|
2674 <section class=descriptions>
|
|
114
|
2675 <h3>Descriptions</h3>
|
|
106
|
2676
|
|
|
2677 <div class=grey><div class=white>
|
|
114
|
2678 <h5 class=darkHeader>Sequences producing significant alignments:</h5>
|
|
106
|
2679
|
|
|
2680 <table class=descriptiontable>
|
|
|
2681 <col/><col/><col/><col/><col/><col/><col/>
|
|
|
2682 <tr>
|
|
|
2683 <th>Description</th>
|
|
|
2684 <th>Max score</th>
|
|
|
2685 <th>Total score</th>
|
|
|
2686 <th>Query cover</th>
|
|
|
2687 <th>E value</th>
|
|
|
2688 <th>Ident</th>
|
|
|
2689 <th>Accession</th>
|
|
|
2690 </tr>
|
|
|
2691 <tr>
|
|
|
2692 <td><div><a href="#hit47-1"
|
|
|
2693 title="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000"
|
|
|
2694 id="description47-1">
|
|
|
2695 AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000
|
|
|
2696 </a></div></td>
|
|
|
2697 <td>37.4</td>
|
|
|
2698 <td>37.4</td>
|
|
|
2699 <td>100%</td>
|
|
|
2700 <td>9.338e-08</td>
|
|
|
2701 <td>92%</td>
|
|
|
2702 <td><a href="http://example.com/example-genebank?id=Subject_7">Subject_7</a></td>
|
|
|
2703 </tr>
|
|
|
2704 </table>
|
|
|
2705
|
|
|
2706 </div></div>
|
|
|
2707 </section>
|
|
|
2708
|
|
|
2709
|
|
|
2710
|
|
|
2711 <section class=alignments>
|
|
114
|
2712 <h3>Alignments</h3>
|
|
106
|
2713
|
|
|
2714 <div class=grey><div class=white>
|
|
|
2715 <div class=alignment id=hit47-1>
|
|
|
2716
|
|
|
2717 <div class=linkheader>
|
|
|
2718 <div class=right><a href="#description47-1">Descriptions</a></div>
|
|
|
2719 <a class="linkheader" href="http://example.com/example-genebank?id=Subject_7">Gene Bank</a>
|
|
|
2720 </div>
|
|
|
2721
|
|
|
2722 <div class=title>
|
|
|
2723 <p class=hittitle>AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000</p>
|
|
|
2724 <p class=titleinfo>
|
|
|
2725 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank?id=Subject_7">Subject_7</a>
|
|
|
2726 <span class=b>Length:</span> 4180
|
|
|
2727 <span class=b>Number of Matches:</span> 1
|
|
|
2728 </p>
|
|
|
2729 </div>
|
|
|
2730
|
|
|
2731
|
|
|
2732 <div class=hotspot id=hotspot47-1-1>
|
|
|
2733 <p class=range>
|
|
|
2734 <span class=range>Range 1: 1541 to 1565</span>
|
|
|
2735 </p>
|
|
|
2736
|
|
|
2737 <table class=hotspotstable>
|
|
|
2738 <tr>
|
|
|
2739 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
|
|
|
2740 </tr>
|
|
|
2741 <tr>
|
|
|
2742 <td>37.4 bits(40)</td>
|
|
|
2743 <td>0.0</td>
|
|
|
2744 <td>23/25(92%)</td>
|
|
|
2745 <td>0/25(0%)</td>
|
|
|
2746 <td>Plus/Plus</td>
|
|
|
2747 </tr>
|
|
|
2748 </table>
|
|
|
2749
|
|
|
2750 <pre class=alignmentgraphic>Query 1 ACATGAACAGCGCCTTGACCACAGC 25
|
|
|
2751 |||||||||||||| ||||||| ||
|
|
|
2752 Subject 1541 ACATGAACAGCGCCCTGACCACCGC 1565</pre>
|
|
|
2753 </div>
|
|
|
2754
|
|
|
2755 </div>
|
|
|
2756
|
|
|
2757 </div></div>
|
|
|
2758 </section>
|
|
|
2759 </section>
|
|
|
2760
|
|
|
2761 <section class=match id=match48>
|
|
|
2762
|
|
114
|
2763 <h2>Nucleotide Sequence (25 letters)</h2>
|
|
106
|
2764
|
|
|
2765 <section class=header>
|
|
|
2766
|
|
|
2767 <table class=headerdata>
|
|
114
|
2768 <tr><td class=param>Query number:</td><td>48</td></tr>
|
|
|
2769 <tr><td class=param>Query ID:</td><td>Query_6</td></tr>
|
|
|
2770 <tr><td class=param>Definition line:</td><td>Probe|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2771 <tr><td class=param>Length:</td><td>25</td></tr>
|
|
106
|
2772 </table>
|
|
|
2773
|
|
|
2774 </section>
|
|
|
2775
|
|
|
2776
|
|
|
2777 <section class=graphics>
|
|
114
|
2778 <h3>Graphic Summary</h3>
|
|
106
|
2779
|
|
|
2780 <div class=grey>
|
|
114
|
2781 <h4 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h4>
|
|
106
|
2782
|
|
|
2783 <div class=defline id=defline48>
|
|
|
2784 Mouse-over to show defline and scores, click to show alignments
|
|
|
2785 </div>
|
|
|
2786
|
|
|
2787 <div class=graphic>
|
|
114
|
2788 <h5 class=darkHeader>Color key for alignment scores</h5>
|
|
106
|
2789 <div class=legend><div class=graphicrow>
|
|
|
2790 <div class=graphicitem style="background-color: black"><40</div>
|
|
|
2791 <div class=graphicitem style="background-color: blue">40–50</div>
|
|
|
2792 <div class=graphicitem style="background-color: green">50–80</div>
|
|
|
2793 <div class=graphicitem style="background-color: magenta">80–200</div>
|
|
|
2794 <div class=graphicitem style="background-color: red">200≤</div>
|
|
|
2795 </div></div>
|
|
|
2796 <div style="clear: left"></div>
|
|
|
2797
|
|
|
2798 <div class=tablewrapper>
|
|
|
2799
|
|
|
2800 <div class=scale>
|
|
|
2801 <div>query:</div>
|
|
|
2802 <div class=graphicrow>
|
|
|
2803 <div>
|
|
|
2804 <div class=graphicitem style="width: 12%">
|
|
|
2805 <div>3</div>
|
|
|
2806 </div>
|
|
|
2807 <div class=graphicitem style="width: 12%">
|
|
|
2808 <div>6</div>
|
|
|
2809 </div>
|
|
|
2810 <div class=graphicitem style="width: 12%">
|
|
|
2811 <div>9</div>
|
|
|
2812 </div>
|
|
|
2813 <div class=graphicitem style="width: 12%">
|
|
|
2814 <div>12</div>
|
|
|
2815 </div>
|
|
|
2816 <div class=graphicitem style="width: 12%">
|
|
|
2817 <div>15</div>
|
|
|
2818 </div>
|
|
|
2819 <div class=graphicitem style="width: 12%">
|
|
|
2820 <div>18</div>
|
|
|
2821 </div>
|
|
|
2822 <div class=graphicitem style="width: 12%">
|
|
|
2823 <div>21</div>
|
|
|
2824 </div>
|
|
|
2825 <div class=graphicitem style="width: 12%">
|
|
|
2826 <div>24</div>
|
|
|
2827 </div>
|
|
|
2828 <div class=graphicitem style="width: 4%">
|
|
|
2829 <div>25</div>
|
|
|
2830 </div>
|
|
|
2831 </div>
|
|
|
2832 </div>
|
|
|
2833 <div style="clear: left"></div>
|
|
|
2834 </div>
|
|
|
2835
|
|
|
2836 <a class=matchresult
|
|
|
2837 href="#hit48-1"
|
|
|
2838 onmouseover='document.getElementById("defline48").innerHTML="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000"'
|
|
|
2839 onmouseout='document.getElementById("defline48").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
|
|
|
2840 title="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000">
|
|
|
2841 <div class="matchrow graphicrow">
|
|
|
2842 <div class="matchitem graphicitem"
|
|
|
2843 style="background-color: black; width: 100%"></div>
|
|
|
2844 </div>
|
|
|
2845 </a>
|
|
|
2846
|
|
|
2847 </div>
|
|
|
2848 </div>
|
|
|
2849 </div>
|
|
|
2850 </section>
|
|
|
2851
|
|
|
2852
|
|
|
2853
|
|
|
2854 <section class=descriptions>
|
|
114
|
2855 <h3>Descriptions</h3>
|
|
106
|
2856
|
|
|
2857 <div class=grey><div class=white>
|
|
114
|
2858 <h5 class=darkHeader>Sequences producing significant alignments:</h5>
|
|
106
|
2859
|
|
|
2860 <table class=descriptiontable>
|
|
|
2861 <col/><col/><col/><col/><col/><col/><col/>
|
|
|
2862 <tr>
|
|
|
2863 <th>Description</th>
|
|
|
2864 <th>Max score</th>
|
|
|
2865 <th>Total score</th>
|
|
|
2866 <th>Query cover</th>
|
|
|
2867 <th>E value</th>
|
|
|
2868 <th>Ident</th>
|
|
|
2869 <th>Accession</th>
|
|
|
2870 </tr>
|
|
|
2871 <tr>
|
|
|
2872 <td><div><a href="#hit48-1"
|
|
|
2873 title="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000"
|
|
|
2874 id="description48-1">
|
|
|
2875 EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000
|
|
|
2876 </a></div></td>
|
|
|
2877 <td>37.4</td>
|
|
|
2878 <td>37.4</td>
|
|
|
2879 <td>100%</td>
|
|
|
2880 <td>9.338e-08</td>
|
|
|
2881 <td>92%</td>
|
|
|
2882 <td><a href="http://example.com/example-genebank?id=Subject_8">Subject_8</a></td>
|
|
|
2883 </tr>
|
|
|
2884 </table>
|
|
|
2885
|
|
|
2886 </div></div>
|
|
|
2887 </section>
|
|
|
2888
|
|
|
2889
|
|
|
2890
|
|
|
2891 <section class=alignments>
|
|
114
|
2892 <h3>Alignments</h3>
|
|
106
|
2893
|
|
|
2894 <div class=grey><div class=white>
|
|
|
2895 <div class=alignment id=hit48-1>
|
|
|
2896
|
|
|
2897 <div class=linkheader>
|
|
|
2898 <div class=right><a href="#description48-1">Descriptions</a></div>
|
|
|
2899 <a class="linkheader" href="http://example.com/example-genebank?id=Subject_8">Gene Bank</a>
|
|
|
2900 </div>
|
|
|
2901
|
|
|
2902 <div class=title>
|
|
|
2903 <p class=hittitle>EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000</p>
|
|
|
2904 <p class=titleinfo>
|
|
|
2905 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank?id=Subject_8">Subject_8</a>
|
|
|
2906 <span class=b>Length:</span> 4983
|
|
|
2907 <span class=b>Number of Matches:</span> 1
|
|
|
2908 </p>
|
|
|
2909 </div>
|
|
|
2910
|
|
|
2911
|
|
|
2912 <div class=hotspot id=hotspot48-1-1>
|
|
|
2913 <p class=range>
|
|
|
2914 <span class=range>Range 1: 2344 to 2368</span>
|
|
|
2915 </p>
|
|
|
2916
|
|
|
2917 <table class=hotspotstable>
|
|
|
2918 <tr>
|
|
|
2919 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
|
|
|
2920 </tr>
|
|
|
2921 <tr>
|
|
|
2922 <td>37.4 bits(40)</td>
|
|
|
2923 <td>0.0</td>
|
|
|
2924 <td>23/25(92%)</td>
|
|
|
2925 <td>0/25(0%)</td>
|
|
|
2926 <td>Plus/Plus</td>
|
|
|
2927 </tr>
|
|
|
2928 </table>
|
|
|
2929
|
|
|
2930 <pre class=alignmentgraphic>Query 1 ACATGAACAGCGCCTTGACCACAGC 25
|
|
|
2931 |||||||||||||| ||||||| ||
|
|
|
2932 Subject 2344 ACATGAACAGCGCCCTGACCACCGC 2368</pre>
|
|
|
2933 </div>
|
|
|
2934
|
|
|
2935 </div>
|
|
|
2936
|
|
|
2937 </div></div>
|
|
|
2938 </section>
|
|
|
2939 </section>
|
|
|
2940
|
|
|
2941 <section class=match id=match49>
|
|
|
2942
|
|
114
|
2943 <h2>Nucleotide Sequence (74 letters)</h2>
|
|
106
|
2944
|
|
|
2945 <section class=header>
|
|
|
2946
|
|
|
2947 <table class=headerdata>
|
|
114
|
2948 <tr><td class=param>Query number:</td><td>49</td></tr>
|
|
|
2949 <tr><td class=param>Query ID:</td><td>Query_7</td></tr>
|
|
|
2950 <tr><td class=param>Definition line:</td><td>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2951 <tr><td class=param>Length:</td><td>74</td></tr>
|
|
106
|
2952 </table>
|
|
|
2953
|
|
|
2954 </section>
|
|
|
2955
|
|
|
2956 <section>
|
|
114
|
2957 <h3>No Hits</h3>
|
|
106
|
2958 <div class=grey>
|
|
|
2959 <table class=headerdata>
|
|
|
2960 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2961 </table>
|
|
|
2962 </div>
|
|
|
2963 </section>
|
|
|
2964 </section>
|
|
|
2965
|
|
|
2966 <section class=match id=match50>
|
|
|
2967
|
|
114
|
2968 <h2>Nucleotide Sequence (74 letters)</h2>
|
|
106
|
2969
|
|
|
2970 <section class=header>
|
|
|
2971
|
|
|
2972 <table class=headerdata>
|
|
114
|
2973 <tr><td class=param>Query number:</td><td>50</td></tr>
|
|
|
2974 <tr><td class=param>Query ID:</td><td>Query_7</td></tr>
|
|
|
2975 <tr><td class=param>Definition line:</td><td>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
2976 <tr><td class=param>Length:</td><td>74</td></tr>
|
|
106
|
2977 </table>
|
|
|
2978
|
|
|
2979 </section>
|
|
|
2980
|
|
|
2981 <section>
|
|
114
|
2982 <h3>No Hits</h3>
|
|
106
|
2983 <div class=grey>
|
|
|
2984 <table class=headerdata>
|
|
|
2985 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
2986 </table>
|
|
|
2987 </div>
|
|
|
2988 </section>
|
|
|
2989 </section>
|
|
|
2990
|
|
|
2991 <section class=match id=match51>
|
|
|
2992
|
|
114
|
2993 <h2>Nucleotide Sequence (74 letters)</h2>
|
|
106
|
2994
|
|
|
2995 <section class=header>
|
|
|
2996
|
|
|
2997 <table class=headerdata>
|
|
114
|
2998 <tr><td class=param>Query number:</td><td>51</td></tr>
|
|
|
2999 <tr><td class=param>Query ID:</td><td>Query_7</td></tr>
|
|
|
3000 <tr><td class=param>Definition line:</td><td>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
3001 <tr><td class=param>Length:</td><td>74</td></tr>
|
|
106
|
3002 </table>
|
|
|
3003
|
|
|
3004 </section>
|
|
|
3005
|
|
|
3006 <section>
|
|
114
|
3007 <h3>No Hits</h3>
|
|
106
|
3008 <div class=grey>
|
|
|
3009 <table class=headerdata>
|
|
|
3010 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
3011 </table>
|
|
|
3012 </div>
|
|
|
3013 </section>
|
|
|
3014 </section>
|
|
|
3015
|
|
|
3016 <section class=match id=match52>
|
|
|
3017
|
|
114
|
3018 <h2>Nucleotide Sequence (74 letters)</h2>
|
|
106
|
3019
|
|
|
3020 <section class=header>
|
|
|
3021
|
|
|
3022 <table class=headerdata>
|
|
114
|
3023 <tr><td class=param>Query number:</td><td>52</td></tr>
|
|
|
3024 <tr><td class=param>Query ID:</td><td>Query_7</td></tr>
|
|
|
3025 <tr><td class=param>Definition line:</td><td>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
3026 <tr><td class=param>Length:</td><td>74</td></tr>
|
|
106
|
3027 </table>
|
|
|
3028
|
|
|
3029 </section>
|
|
|
3030
|
|
|
3031 <section>
|
|
114
|
3032 <h3>No Hits</h3>
|
|
106
|
3033 <div class=grey>
|
|
|
3034 <table class=headerdata>
|
|
|
3035 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
3036 </table>
|
|
|
3037 </div>
|
|
|
3038 </section>
|
|
|
3039 </section>
|
|
|
3040
|
|
|
3041 <section class=match id=match53>
|
|
|
3042
|
|
114
|
3043 <h2>Nucleotide Sequence (74 letters)</h2>
|
|
106
|
3044
|
|
|
3045 <section class=header>
|
|
|
3046
|
|
|
3047 <table class=headerdata>
|
|
114
|
3048 <tr><td class=param>Query number:</td><td>53</td></tr>
|
|
|
3049 <tr><td class=param>Query ID:</td><td>Query_7</td></tr>
|
|
|
3050 <tr><td class=param>Definition line:</td><td>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
3051 <tr><td class=param>Length:</td><td>74</td></tr>
|
|
106
|
3052 </table>
|
|
|
3053
|
|
|
3054 </section>
|
|
|
3055
|
|
|
3056 <section>
|
|
114
|
3057 <h3>No Hits</h3>
|
|
106
|
3058 <div class=grey>
|
|
|
3059 <table class=headerdata>
|
|
|
3060 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
3061 </table>
|
|
|
3062 </div>
|
|
|
3063 </section>
|
|
|
3064 </section>
|
|
|
3065
|
|
|
3066 <section class=match id=match54>
|
|
|
3067
|
|
114
|
3068 <h2>Nucleotide Sequence (74 letters)</h2>
|
|
106
|
3069
|
|
|
3070 <section class=header>
|
|
|
3071
|
|
|
3072 <table class=headerdata>
|
|
114
|
3073 <tr><td class=param>Query number:</td><td>54</td></tr>
|
|
|
3074 <tr><td class=param>Query ID:</td><td>Query_7</td></tr>
|
|
|
3075 <tr><td class=param>Definition line:</td><td>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
3076 <tr><td class=param>Length:</td><td>74</td></tr>
|
|
106
|
3077 </table>
|
|
|
3078
|
|
|
3079 </section>
|
|
|
3080
|
|
|
3081 <section>
|
|
114
|
3082 <h3>No Hits</h3>
|
|
106
|
3083 <div class=grey>
|
|
|
3084 <table class=headerdata>
|
|
|
3085 <tr><td class=param>Message:</td><td>No hits found</td></tr>
|
|
|
3086 </table>
|
|
|
3087 </div>
|
|
|
3088 </section>
|
|
|
3089 </section>
|
|
|
3090
|
|
|
3091 <section class=match id=match55>
|
|
|
3092
|
|
114
|
3093 <h2>Nucleotide Sequence (74 letters)</h2>
|
|
106
|
3094
|
|
|
3095 <section class=header>
|
|
|
3096
|
|
|
3097 <table class=headerdata>
|
|
114
|
3098 <tr><td class=param>Query number:</td><td>55</td></tr>
|
|
|
3099 <tr><td class=param>Query ID:</td><td>Query_7</td></tr>
|
|
|
3100 <tr><td class=param>Definition line:</td><td>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
3101 <tr><td class=param>Length:</td><td>74</td></tr>
|
|
106
|
3102 </table>
|
|
|
3103
|
|
|
3104 </section>
|
|
|
3105
|
|
|
3106
|
|
|
3107 <section class=graphics>
|
|
114
|
3108 <h3>Graphic Summary</h3>
|
|
106
|
3109
|
|
|
3110 <div class=grey>
|
|
114
|
3111 <h4 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h4>
|
|
106
|
3112
|
|
|
3113 <div class=defline id=defline55>
|
|
|
3114 Mouse-over to show defline and scores, click to show alignments
|
|
|
3115 </div>
|
|
|
3116
|
|
|
3117 <div class=graphic>
|
|
114
|
3118 <h5 class=darkHeader>Color key for alignment scores</h5>
|
|
106
|
3119 <div class=legend><div class=graphicrow>
|
|
|
3120 <div class=graphicitem style="background-color: black"><40</div>
|
|
|
3121 <div class=graphicitem style="background-color: blue">40–50</div>
|
|
|
3122 <div class=graphicitem style="background-color: green">50–80</div>
|
|
|
3123 <div class=graphicitem style="background-color: magenta">80–200</div>
|
|
|
3124 <div class=graphicitem style="background-color: red">200≤</div>
|
|
|
3125 </div></div>
|
|
|
3126 <div style="clear: left"></div>
|
|
|
3127
|
|
|
3128 <div class=tablewrapper>
|
|
|
3129
|
|
|
3130 <div class=scale>
|
|
|
3131 <div>query:</div>
|
|
|
3132 <div class=graphicrow>
|
|
|
3133 <div>
|
|
|
3134 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3135 <div>8</div>
|
|
|
3136 </div>
|
|
|
3137 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3138 <div>16</div>
|
|
|
3139 </div>
|
|
|
3140 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3141 <div>24</div>
|
|
|
3142 </div>
|
|
|
3143 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3144 <div>32</div>
|
|
|
3145 </div>
|
|
|
3146 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3147 <div>40</div>
|
|
|
3148 </div>
|
|
|
3149 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3150 <div>48</div>
|
|
|
3151 </div>
|
|
|
3152 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3153 <div>56</div>
|
|
|
3154 </div>
|
|
|
3155 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3156 <div>64</div>
|
|
|
3157 </div>
|
|
|
3158 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3159 <div>72</div>
|
|
|
3160 </div>
|
|
|
3161 <div class=graphicitem style="width: 2.7027027027%">
|
|
|
3162 <div> </div>
|
|
|
3163 <div class=lastlabel>74</div>
|
|
|
3164 </div>
|
|
|
3165 </div>
|
|
|
3166 </div>
|
|
|
3167 <div style="clear: left"></div>
|
|
|
3168 </div>
|
|
|
3169
|
|
|
3170 <a class=matchresult
|
|
|
3171 href="#hit55-1"
|
|
|
3172 onmouseover='document.getElementById("defline55").innerHTML="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000"'
|
|
|
3173 onmouseout='document.getElementById("defline55").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
|
|
|
3174 title="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000">
|
|
|
3175 <div class="matchrow graphicrow">
|
|
|
3176 <div class="matchitem graphicitem"
|
|
|
3177 style="background-color: green; width: 100%"></div>
|
|
|
3178 </div>
|
|
|
3179 </a>
|
|
|
3180
|
|
|
3181 </div>
|
|
|
3182 </div>
|
|
|
3183 </div>
|
|
|
3184 </section>
|
|
|
3185
|
|
|
3186
|
|
|
3187
|
|
|
3188 <section class=descriptions>
|
|
114
|
3189 <h3>Descriptions</h3>
|
|
106
|
3190
|
|
|
3191 <div class=grey><div class=white>
|
|
114
|
3192 <h5 class=darkHeader>Sequences producing significant alignments:</h5>
|
|
106
|
3193
|
|
|
3194 <table class=descriptiontable>
|
|
|
3195 <col/><col/><col/><col/><col/><col/><col/>
|
|
|
3196 <tr>
|
|
|
3197 <th>Description</th>
|
|
|
3198 <th>Max score</th>
|
|
|
3199 <th>Total score</th>
|
|
|
3200 <th>Query cover</th>
|
|
|
3201 <th>E value</th>
|
|
|
3202 <th>Ident</th>
|
|
|
3203 <th>Accession</th>
|
|
|
3204 </tr>
|
|
|
3205 <tr>
|
|
|
3206 <td><div><a href="#hit55-1"
|
|
|
3207 title="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000"
|
|
|
3208 id="description55-1">
|
|
|
3209 AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000
|
|
|
3210 </a></div></td>
|
|
|
3211 <td>89.7</td>
|
|
|
3212 <td>89.7</td>
|
|
|
3213 <td>100%</td>
|
|
|
3214 <td>6.629e-23</td>
|
|
|
3215 <td>86%</td>
|
|
|
3216 <td><a href="http://example.com/example-genebank?id=Subject_7">Subject_7</a></td>
|
|
|
3217 </tr>
|
|
|
3218 </table>
|
|
|
3219
|
|
|
3220 </div></div>
|
|
|
3221 </section>
|
|
|
3222
|
|
|
3223
|
|
|
3224
|
|
|
3225 <section class=alignments>
|
|
114
|
3226 <h3>Alignments</h3>
|
|
106
|
3227
|
|
|
3228 <div class=grey><div class=white>
|
|
|
3229 <div class=alignment id=hit55-1>
|
|
|
3230
|
|
|
3231 <div class=linkheader>
|
|
|
3232 <div class=right><a href="#description55-1">Descriptions</a></div>
|
|
|
3233 <a class="linkheader" href="http://example.com/example-genebank?id=Subject_7">Gene Bank</a>
|
|
|
3234 </div>
|
|
|
3235
|
|
|
3236 <div class=title>
|
|
|
3237 <p class=hittitle>AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000</p>
|
|
|
3238 <p class=titleinfo>
|
|
|
3239 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank?id=Subject_7">Subject_7</a>
|
|
|
3240 <span class=b>Length:</span> 4180
|
|
|
3241 <span class=b>Number of Matches:</span> 1
|
|
|
3242 </p>
|
|
|
3243 </div>
|
|
|
3244
|
|
|
3245
|
|
|
3246 <div class=hotspot id=hotspot55-1-1>
|
|
|
3247 <p class=range>
|
|
|
3248 <span class=range>Range 1: 1516 to 1589</span>
|
|
|
3249 </p>
|
|
|
3250
|
|
|
3251 <table class=hotspotstable>
|
|
|
3252 <tr>
|
|
|
3253 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
|
|
|
3254 </tr>
|
|
|
3255 <tr>
|
|
|
3256 <td>89.7 bits(98)</td>
|
|
|
3257 <td>0.0</td>
|
|
|
3258 <td>64/74(86%)</td>
|
|
|
3259 <td>0/74(0%)</td>
|
|
|
3260 <td>Plus/Plus</td>
|
|
|
3261 </tr>
|
|
|
3262 </table>
|
|
|
3263
|
|
|
3264 <pre class=alignmentgraphic>Query 1 GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTG 60
|
|
|
3265 ||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| |
|
|
|
3266 Subject 1516 GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTC 1575</pre>
|
|
|
3267 <pre class=alignmentgraphic>Query 61 TTCGCAGTCCAGAA 74
|
|
|
3268 ||||| ||||||||
|
|
|
3269 Subject 1576 TTCGCCGTCCAGAA 1589</pre>
|
|
|
3270 </div>
|
|
|
3271
|
|
|
3272 </div>
|
|
|
3273
|
|
|
3274 </div></div>
|
|
|
3275 </section>
|
|
|
3276 </section>
|
|
|
3277
|
|
|
3278 <section class=match id=match56>
|
|
|
3279
|
|
114
|
3280 <h2>Nucleotide Sequence (74 letters)</h2>
|
|
106
|
3281
|
|
|
3282 <section class=header>
|
|
|
3283
|
|
|
3284 <table class=headerdata>
|
|
114
|
3285 <tr><td class=param>Query number:</td><td>56</td></tr>
|
|
|
3286 <tr><td class=param>Query ID:</td><td>Query_7</td></tr>
|
|
|
3287 <tr><td class=param>Definition line:</td><td>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</td></tr>
|
|
|
3288 <tr><td class=param>Length:</td><td>74</td></tr>
|
|
106
|
3289 </table>
|
|
|
3290
|
|
|
3291 </section>
|
|
|
3292
|
|
|
3293
|
|
|
3294 <section class=graphics>
|
|
114
|
3295 <h3>Graphic Summary</h3>
|
|
106
|
3296
|
|
|
3297 <div class=grey>
|
|
114
|
3298 <h4 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h4>
|
|
106
|
3299
|
|
|
3300 <div class=defline id=defline56>
|
|
|
3301 Mouse-over to show defline and scores, click to show alignments
|
|
|
3302 </div>
|
|
|
3303
|
|
|
3304 <div class=graphic>
|
|
114
|
3305 <h5 class=darkHeader>Color key for alignment scores</h5>
|
|
106
|
3306 <div class=legend><div class=graphicrow>
|
|
|
3307 <div class=graphicitem style="background-color: black"><40</div>
|
|
|
3308 <div class=graphicitem style="background-color: blue">40–50</div>
|
|
|
3309 <div class=graphicitem style="background-color: green">50–80</div>
|
|
|
3310 <div class=graphicitem style="background-color: magenta">80–200</div>
|
|
|
3311 <div class=graphicitem style="background-color: red">200≤</div>
|
|
|
3312 </div></div>
|
|
|
3313 <div style="clear: left"></div>
|
|
|
3314
|
|
|
3315 <div class=tablewrapper>
|
|
|
3316
|
|
|
3317 <div class=scale>
|
|
|
3318 <div>query:</div>
|
|
|
3319 <div class=graphicrow>
|
|
|
3320 <div>
|
|
|
3321 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3322 <div>8</div>
|
|
|
3323 </div>
|
|
|
3324 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3325 <div>16</div>
|
|
|
3326 </div>
|
|
|
3327 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3328 <div>24</div>
|
|
|
3329 </div>
|
|
|
3330 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3331 <div>32</div>
|
|
|
3332 </div>
|
|
|
3333 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3334 <div>40</div>
|
|
|
3335 </div>
|
|
|
3336 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3337 <div>48</div>
|
|
|
3338 </div>
|
|
|
3339 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3340 <div>56</div>
|
|
|
3341 </div>
|
|
|
3342 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3343 <div>64</div>
|
|
|
3344 </div>
|
|
|
3345 <div class=graphicitem style="width: 10.8108108108%">
|
|
|
3346 <div>72</div>
|
|
|
3347 </div>
|
|
|
3348 <div class=graphicitem style="width: 2.7027027027%">
|
|
|
3349 <div> </div>
|
|
|
3350 <div class=lastlabel>74</div>
|
|
|
3351 </div>
|
|
|
3352 </div>
|
|
|
3353 </div>
|
|
|
3354 <div style="clear: left"></div>
|
|
|
3355 </div>
|
|
|
3356
|
|
|
3357 <a class=matchresult
|
|
|
3358 href="#hit56-1"
|
|
|
3359 onmouseover='document.getElementById("defline56").innerHTML="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000"'
|
|
|
3360 onmouseout='document.getElementById("defline56").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
|
|
|
3361 title="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000">
|
|
|
3362 <div class="matchrow graphicrow">
|
|
|
3363 <div class="matchitem graphicitem"
|
|
|
3364 style="background-color: green; width: 100%"></div>
|
|
|
3365 </div>
|
|
|
3366 </a>
|
|
|
3367
|
|
|
3368 </div>
|
|
|
3369 </div>
|
|
|
3370 </div>
|
|
|
3371 </section>
|
|
|
3372
|
|
|
3373
|
|
|
3374
|
|
|
3375 <section class=descriptions>
|
|
114
|
3376 <h3>Descriptions</h3>
|
|
106
|
3377
|
|
|
3378 <div class=grey><div class=white>
|
|
114
|
3379 <h5 class=darkHeader>Sequences producing significant alignments:</h5>
|
|
106
|
3380
|
|
|
3381 <table class=descriptiontable>
|
|
|
3382 <col/><col/><col/><col/><col/><col/><col/>
|
|
|
3383 <tr>
|
|
|
3384 <th>Description</th>
|
|
|
3385 <th>Max score</th>
|
|
|
3386 <th>Total score</th>
|
|
|
3387 <th>Query cover</th>
|
|
|
3388 <th>E value</th>
|
|
|
3389 <th>Ident</th>
|
|
|
3390 <th>Accession</th>
|
|
|
3391 </tr>
|
|
|
3392 <tr>
|
|
|
3393 <td><div><a href="#hit56-1"
|
|
|
3394 title="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000"
|
|
|
3395 id="description56-1">
|
|
|
3396 EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000
|
|
|
3397 </a></div></td>
|
|
|
3398 <td>89.7</td>
|
|
|
3399 <td>89.7</td>
|
|
|
3400 <td>100%</td>
|
|
|
3401 <td>6.629e-23</td>
|
|
|
3402 <td>86%</td>
|
|
|
3403 <td><a href="http://example.com/example-genebank?id=Subject_8">Subject_8</a></td>
|
|
|
3404 </tr>
|
|
|
3405 </table>
|
|
|
3406
|
|
|
3407 </div></div>
|
|
|
3408 </section>
|
|
|
3409
|
|
|
3410
|
|
|
3411
|
|
|
3412 <section class=alignments>
|
|
114
|
3413 <h3>Alignments</h3>
|
|
106
|
3414
|
|
|
3415 <div class=grey><div class=white>
|
|
|
3416 <div class=alignment id=hit56-1>
|
|
|
3417
|
|
|
3418 <div class=linkheader>
|
|
|
3419 <div class=right><a href="#description56-1">Descriptions</a></div>
|
|
|
3420 <a class="linkheader" href="http://example.com/example-genebank?id=Subject_8">Gene Bank</a>
|
|
|
3421 </div>
|
|
|
3422
|
|
|
3423 <div class=title>
|
|
|
3424 <p class=hittitle>EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000</p>
|
|
|
3425 <p class=titleinfo>
|
|
|
3426 <span class=b>Sequence ID:</span> <a href="http://example.com/example-genebank?id=Subject_8">Subject_8</a>
|
|
|
3427 <span class=b>Length:</span> 4983
|
|
|
3428 <span class=b>Number of Matches:</span> 1
|
|
|
3429 </p>
|
|
|
3430 </div>
|
|
|
3431
|
|
|
3432
|
|
|
3433 <div class=hotspot id=hotspot56-1-1>
|
|
|
3434 <p class=range>
|
|
|
3435 <span class=range>Range 1: 2319 to 2392</span>
|
|
|
3436 </p>
|
|
|
3437
|
|
|
3438 <table class=hotspotstable>
|
|
|
3439 <tr>
|
|
|
3440 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
|
|
|
3441 </tr>
|
|
|
3442 <tr>
|
|
|
3443 <td>89.7 bits(98)</td>
|
|
|
3444 <td>0.0</td>
|
|
|
3445 <td>64/74(86%)</td>
|
|
|
3446 <td>0/74(0%)</td>
|
|
|
3447 <td>Plus/Plus</td>
|
|
|
3448 </tr>
|
|
|
3449 </table>
|
|
|
3450
|
|
|
3451 <pre class=alignmentgraphic>Query 1 GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTG 60
|
|
|
3452 ||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| |
|
|
|
3453 Subject 2319 GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTC 2378</pre>
|
|
|
3454 <pre class=alignmentgraphic>Query 61 TTCGCAGTCCAGAA 74
|
|
|
3455 ||||| ||||||||
|
|
|
3456 Subject 2379 TTCGCCGTCCAGAA 2392</pre>
|
|
|
3457 </div>
|
|
|
3458
|
|
|
3459 </div>
|
|
|
3460
|
|
|
3461 </div></div>
|
|
|
3462 </section>
|
|
|
3463 </section>
|
|
|
3464
|
|
|
3465 </div>
|
|
|
3466
|
|
|
3467 <footer>
|
|
|
3468 This page was generated by <a href="https://github.com/thehyve/blast2html/">blast2html</a>.
|
|
|
3469 </footer>
|
|
|
3470 </body>
|
|
|
3471 </html>
|
|
|
3472
|
