Mercurial > repos > jankanis > blast2html
annotate test-data/blast xml example3.xml @ 90:c174a815da9c
add LIBRARY_PATH variable
author | Jan Kanis <jan.code@jankanis.nl> |
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date | Tue, 24 Jun 2014 17:13:41 +0200 |
parents | ce8f29efc0a1 |
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rev | line source |
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1 <?xml version="1.0"?> |
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2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> |
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3 <BlastOutput> |
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4 <BlastOutput_program>blastn</BlastOutput_program> |
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5 <BlastOutput_version>BLASTN 2.2.29+</BlastOutput_version> |
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6 <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference> |
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7 <BlastOutput_db></BlastOutput_db> |
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8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID> |
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9 <BlastOutput_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</BlastOutput_query-def> |
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10 <BlastOutput_query-len>20</BlastOutput_query-len> |
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11 <BlastOutput_param> |
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12 <Parameters> |
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13 <Parameters_expect>0.001</Parameters_expect> |
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14 <Parameters_sc-match>2</Parameters_sc-match> |
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15 <Parameters_sc-mismatch>-3</Parameters_sc-mismatch> |
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16 <Parameters_gap-open>5</Parameters_gap-open> |
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17 <Parameters_gap-extend>2</Parameters_gap-extend> |
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18 <Parameters_filter>L;m;</Parameters_filter> |
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19 </Parameters> |
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20 </BlastOutput_param> |
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21 <BlastOutput_iterations> |
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22 <Iteration> |
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23 <Iteration_iter-num>1</Iteration_iter-num> |
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24 <Iteration_query-ID>Query_1</Iteration_query-ID> |
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25 <Iteration_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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26 <Iteration_query-len>20</Iteration_query-len> |
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27 <Iteration_hits> |
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28 </Iteration_hits> |
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29 <Iteration_stat> |
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30 <Statistics> |
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31 <Statistics_db-num>0</Statistics_db-num> |
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32 <Statistics_db-len>0</Statistics_db-len> |
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33 <Statistics_hsp-len>8</Statistics_hsp-len> |
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34 <Statistics_eff-space>12312</Statistics_eff-space> |
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35 <Statistics_kappa>0.41</Statistics_kappa> |
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36 <Statistics_lambda>0.625</Statistics_lambda> |
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37 <Statistics_entropy>0.78</Statistics_entropy> |
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38 </Statistics> |
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39 </Iteration_stat> |
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40 <Iteration_message>No hits found</Iteration_message> |
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41 </Iteration> |
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42 <Iteration> |
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43 <Iteration_iter-num>2</Iteration_iter-num> |
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44 <Iteration_query-ID>Query_1</Iteration_query-ID> |
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45 <Iteration_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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46 <Iteration_query-len>20</Iteration_query-len> |
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47 <Iteration_hits> |
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48 </Iteration_hits> |
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49 <Iteration_stat> |
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50 <Statistics> |
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51 <Statistics_db-num>0</Statistics_db-num> |
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52 <Statistics_db-len>0</Statistics_db-len> |
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53 <Statistics_hsp-len>8</Statistics_hsp-len> |
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54 <Statistics_eff-space>12312</Statistics_eff-space> |
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55 <Statistics_kappa>0.41</Statistics_kappa> |
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56 <Statistics_lambda>0.625</Statistics_lambda> |
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57 <Statistics_entropy>0.78</Statistics_entropy> |
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58 </Statistics> |
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59 </Iteration_stat> |
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60 <Iteration_message>No hits found</Iteration_message> |
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61 </Iteration> |
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62 <Iteration> |
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63 <Iteration_iter-num>3</Iteration_iter-num> |
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64 <Iteration_query-ID>Query_1</Iteration_query-ID> |
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65 <Iteration_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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66 <Iteration_query-len>20</Iteration_query-len> |
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67 <Iteration_hits> |
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68 <Hit> |
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69 <Hit_num>1</Hit_num> |
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70 <Hit_id>Subject_3</Hit_id> |
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71 <Hit_def>DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000</Hit_def> |
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72 <Hit_accession>Subject_3</Hit_accession> |
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73 <Hit_len>323</Hit_len> |
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74 <Hit_hsps> |
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75 <Hsp> |
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76 <Hsp_num>1</Hsp_num> |
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77 <Hsp_bit-score>37.3537</Hsp_bit-score> |
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78 <Hsp_score>40</Hsp_score> |
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79 <Hsp_evalue>7.01052e-08</Hsp_evalue> |
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80 <Hsp_query-from>1</Hsp_query-from> |
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81 <Hsp_query-to>20</Hsp_query-to> |
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82 <Hsp_hit-from>200</Hsp_hit-from> |
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83 <Hsp_hit-to>219</Hsp_hit-to> |
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84 <Hsp_query-frame>1</Hsp_query-frame> |
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85 <Hsp_hit-frame>1</Hsp_hit-frame> |
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86 <Hsp_identity>20</Hsp_identity> |
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87 <Hsp_positive>20</Hsp_positive> |
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88 <Hsp_gaps>0</Hsp_gaps> |
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89 <Hsp_align-len>20</Hsp_align-len> |
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90 <Hsp_qseq>AGCGCGCAAACTAGGATAAA</Hsp_qseq> |
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91 <Hsp_hseq>AGCGCGCAAACTAGGATAAA</Hsp_hseq> |
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92 <Hsp_midline>||||||||||||||||||||</Hsp_midline> |
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93 </Hsp> |
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94 </Hit_hsps> |
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95 </Hit> |
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96 </Iteration_hits> |
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97 <Iteration_stat> |
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98 <Statistics> |
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99 <Statistics_db-num>0</Statistics_db-num> |
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100 <Statistics_db-len>0</Statistics_db-len> |
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101 <Statistics_hsp-len>8</Statistics_hsp-len> |
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102 <Statistics_eff-space>12312</Statistics_eff-space> |
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103 <Statistics_kappa>0.41</Statistics_kappa> |
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104 <Statistics_lambda>0.625</Statistics_lambda> |
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105 <Statistics_entropy>0.78</Statistics_entropy> |
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106 </Statistics> |
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107 </Iteration_stat> |
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108 </Iteration> |
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109 <Iteration> |
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110 <Iteration_iter-num>4</Iteration_iter-num> |
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111 <Iteration_query-ID>Query_1</Iteration_query-ID> |
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112 <Iteration_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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113 <Iteration_query-len>20</Iteration_query-len> |
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114 <Iteration_hits> |
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115 </Iteration_hits> |
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116 <Iteration_stat> |
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117 <Statistics> |
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118 <Statistics_db-num>0</Statistics_db-num> |
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119 <Statistics_db-len>0</Statistics_db-len> |
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120 <Statistics_hsp-len>8</Statistics_hsp-len> |
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121 <Statistics_eff-space>12312</Statistics_eff-space> |
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122 <Statistics_kappa>0.41</Statistics_kappa> |
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123 <Statistics_lambda>0.625</Statistics_lambda> |
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124 <Statistics_entropy>0.78</Statistics_entropy> |
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125 </Statistics> |
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126 </Iteration_stat> |
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127 <Iteration_message>No hits found</Iteration_message> |
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128 </Iteration> |
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129 <Iteration> |
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130 <Iteration_iter-num>5</Iteration_iter-num> |
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131 <Iteration_query-ID>Query_1</Iteration_query-ID> |
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132 <Iteration_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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133 <Iteration_query-len>20</Iteration_query-len> |
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134 <Iteration_hits> |
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135 </Iteration_hits> |
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136 <Iteration_stat> |
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137 <Statistics> |
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138 <Statistics_db-num>0</Statistics_db-num> |
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139 <Statistics_db-len>0</Statistics_db-len> |
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140 <Statistics_hsp-len>8</Statistics_hsp-len> |
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141 <Statistics_eff-space>12312</Statistics_eff-space> |
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142 <Statistics_kappa>0.41</Statistics_kappa> |
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143 <Statistics_lambda>0.625</Statistics_lambda> |
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144 <Statistics_entropy>0.78</Statistics_entropy> |
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145 </Statistics> |
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146 </Iteration_stat> |
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147 <Iteration_message>No hits found</Iteration_message> |
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148 </Iteration> |
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149 <Iteration> |
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150 <Iteration_iter-num>6</Iteration_iter-num> |
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151 <Iteration_query-ID>Query_1</Iteration_query-ID> |
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152 <Iteration_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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153 <Iteration_query-len>20</Iteration_query-len> |
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154 <Iteration_hits> |
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155 <Hit> |
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156 <Hit_num>1</Hit_num> |
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157 <Hit_id>Subject_6</Hit_id> |
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158 <Hit_def>AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000</Hit_def> |
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159 <Hit_accession>Subject_6</Hit_accession> |
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160 <Hit_len>2457</Hit_len> |
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161 <Hit_hsps> |
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162 <Hsp> |
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163 <Hsp_num>1</Hsp_num> |
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164 <Hsp_bit-score>37.3537</Hsp_bit-score> |
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165 <Hsp_score>40</Hsp_score> |
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166 <Hsp_evalue>7.01052e-08</Hsp_evalue> |
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167 <Hsp_query-from>1</Hsp_query-from> |
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168 <Hsp_query-to>20</Hsp_query-to> |
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169 <Hsp_hit-from>2119</Hsp_hit-from> |
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170 <Hsp_hit-to>2138</Hsp_hit-to> |
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171 <Hsp_query-frame>1</Hsp_query-frame> |
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172 <Hsp_hit-frame>1</Hsp_hit-frame> |
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173 <Hsp_identity>20</Hsp_identity> |
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174 <Hsp_positive>20</Hsp_positive> |
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175 <Hsp_gaps>0</Hsp_gaps> |
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176 <Hsp_align-len>20</Hsp_align-len> |
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177 <Hsp_qseq>AGCGCGCAAACTAGGATAAA</Hsp_qseq> |
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178 <Hsp_hseq>AGCGCGCAAACTAGGATAAA</Hsp_hseq> |
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179 <Hsp_midline>||||||||||||||||||||</Hsp_midline> |
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180 </Hsp> |
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181 </Hit_hsps> |
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182 </Hit> |
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183 </Iteration_hits> |
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184 <Iteration_stat> |
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185 <Statistics> |
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186 <Statistics_db-num>0</Statistics_db-num> |
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187 <Statistics_db-len>0</Statistics_db-len> |
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188 <Statistics_hsp-len>8</Statistics_hsp-len> |
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189 <Statistics_eff-space>12312</Statistics_eff-space> |
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190 <Statistics_kappa>0.41</Statistics_kappa> |
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191 <Statistics_lambda>0.625</Statistics_lambda> |
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192 <Statistics_entropy>0.78</Statistics_entropy> |
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193 </Statistics> |
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194 </Iteration_stat> |
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195 </Iteration> |
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196 <Iteration> |
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197 <Iteration_iter-num>7</Iteration_iter-num> |
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198 <Iteration_query-ID>Query_1</Iteration_query-ID> |
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199 <Iteration_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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200 <Iteration_query-len>20</Iteration_query-len> |
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201 <Iteration_hits> |
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202 </Iteration_hits> |
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203 <Iteration_stat> |
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204 <Statistics> |
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205 <Statistics_db-num>0</Statistics_db-num> |
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206 <Statistics_db-len>0</Statistics_db-len> |
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207 <Statistics_hsp-len>8</Statistics_hsp-len> |
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208 <Statistics_eff-space>12312</Statistics_eff-space> |
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209 <Statistics_kappa>0.41</Statistics_kappa> |
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210 <Statistics_lambda>0.625</Statistics_lambda> |
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211 <Statistics_entropy>0.78</Statistics_entropy> |
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212 </Statistics> |
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213 </Iteration_stat> |
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214 <Iteration_message>No hits found</Iteration_message> |
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215 </Iteration> |
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216 <Iteration> |
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217 <Iteration_iter-num>8</Iteration_iter-num> |
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218 <Iteration_query-ID>Query_1</Iteration_query-ID> |
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219 <Iteration_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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220 <Iteration_query-len>20</Iteration_query-len> |
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221 <Iteration_hits> |
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222 </Iteration_hits> |
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223 <Iteration_stat> |
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224 <Statistics> |
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225 <Statistics_db-num>0</Statistics_db-num> |
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226 <Statistics_db-len>0</Statistics_db-len> |
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227 <Statistics_hsp-len>8</Statistics_hsp-len> |
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228 <Statistics_eff-space>12312</Statistics_eff-space> |
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229 <Statistics_kappa>0.41</Statistics_kappa> |
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230 <Statistics_lambda>0.625</Statistics_lambda> |
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231 <Statistics_entropy>0.78</Statistics_entropy> |
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232 </Statistics> |
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233 </Iteration_stat> |
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234 <Iteration_message>No hits found</Iteration_message> |
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235 </Iteration> |
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236 <Iteration> |
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237 <Iteration_iter-num>9</Iteration_iter-num> |
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238 <Iteration_query-ID>Query_2</Iteration_query-ID> |
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239 <Iteration_query-def>Reverse_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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240 <Iteration_query-len>20</Iteration_query-len> |
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241 <Iteration_hits> |
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242 </Iteration_hits> |
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243 <Iteration_stat> |
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244 <Statistics> |
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245 <Statistics_db-num>0</Statistics_db-num> |
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246 <Statistics_db-len>0</Statistics_db-len> |
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247 <Statistics_hsp-len>8</Statistics_hsp-len> |
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248 <Statistics_eff-space>12312</Statistics_eff-space> |
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249 <Statistics_kappa>0.41</Statistics_kappa> |
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250 <Statistics_lambda>0.625</Statistics_lambda> |
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251 <Statistics_entropy>0.78</Statistics_entropy> |
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252 </Statistics> |
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253 </Iteration_stat> |
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254 <Iteration_message>No hits found</Iteration_message> |
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255 </Iteration> |
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256 <Iteration> |
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257 <Iteration_iter-num>10</Iteration_iter-num> |
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258 <Iteration_query-ID>Query_2</Iteration_query-ID> |
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259 <Iteration_query-def>Reverse_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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260 <Iteration_query-len>20</Iteration_query-len> |
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261 <Iteration_hits> |
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262 </Iteration_hits> |
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263 <Iteration_stat> |
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264 <Statistics> |
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265 <Statistics_db-num>0</Statistics_db-num> |
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266 <Statistics_db-len>0</Statistics_db-len> |
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267 <Statistics_hsp-len>8</Statistics_hsp-len> |
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268 <Statistics_eff-space>12312</Statistics_eff-space> |
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269 <Statistics_kappa>0.41</Statistics_kappa> |
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270 <Statistics_lambda>0.625</Statistics_lambda> |
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271 <Statistics_entropy>0.78</Statistics_entropy> |
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272 </Statistics> |
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273 </Iteration_stat> |
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274 <Iteration_message>No hits found</Iteration_message> |
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275 </Iteration> |
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276 <Iteration> |
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277 <Iteration_iter-num>11</Iteration_iter-num> |
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278 <Iteration_query-ID>Query_2</Iteration_query-ID> |
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279 <Iteration_query-def>Reverse_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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280 <Iteration_query-len>20</Iteration_query-len> |
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281 <Iteration_hits> |
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282 </Iteration_hits> |
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283 <Iteration_stat> |
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284 <Statistics> |
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285 <Statistics_db-num>0</Statistics_db-num> |
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286 <Statistics_db-len>0</Statistics_db-len> |
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287 <Statistics_hsp-len>8</Statistics_hsp-len> |
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288 <Statistics_eff-space>12312</Statistics_eff-space> |
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289 <Statistics_kappa>0.41</Statistics_kappa> |
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290 <Statistics_lambda>0.625</Statistics_lambda> |
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291 <Statistics_entropy>0.78</Statistics_entropy> |
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292 </Statistics> |
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293 </Iteration_stat> |
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294 <Iteration_message>No hits found</Iteration_message> |
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295 </Iteration> |
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296 <Iteration> |
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297 <Iteration_iter-num>12</Iteration_iter-num> |
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298 <Iteration_query-ID>Query_2</Iteration_query-ID> |
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299 <Iteration_query-def>Reverse_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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300 <Iteration_query-len>20</Iteration_query-len> |
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301 <Iteration_hits> |
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302 </Iteration_hits> |
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303 <Iteration_stat> |
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304 <Statistics> |
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305 <Statistics_db-num>0</Statistics_db-num> |
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306 <Statistics_db-len>0</Statistics_db-len> |
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307 <Statistics_hsp-len>8</Statistics_hsp-len> |
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308 <Statistics_eff-space>12312</Statistics_eff-space> |
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309 <Statistics_kappa>0.41</Statistics_kappa> |
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310 <Statistics_lambda>0.625</Statistics_lambda> |
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311 <Statistics_entropy>0.78</Statistics_entropy> |
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312 </Statistics> |
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313 </Iteration_stat> |
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314 <Iteration_message>No hits found</Iteration_message> |
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315 </Iteration> |
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316 <Iteration> |
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317 <Iteration_iter-num>13</Iteration_iter-num> |
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318 <Iteration_query-ID>Query_2</Iteration_query-ID> |
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319 <Iteration_query-def>Reverse_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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320 <Iteration_query-len>20</Iteration_query-len> |
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321 <Iteration_hits> |
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322 </Iteration_hits> |
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323 <Iteration_stat> |
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324 <Statistics> |
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325 <Statistics_db-num>0</Statistics_db-num> |
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326 <Statistics_db-len>0</Statistics_db-len> |
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327 <Statistics_hsp-len>8</Statistics_hsp-len> |
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328 <Statistics_eff-space>12312</Statistics_eff-space> |
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329 <Statistics_kappa>0.41</Statistics_kappa> |
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330 <Statistics_lambda>0.625</Statistics_lambda> |
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331 <Statistics_entropy>0.78</Statistics_entropy> |
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332 </Statistics> |
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333 </Iteration_stat> |
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334 <Iteration_message>No hits found</Iteration_message> |
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335 </Iteration> |
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336 <Iteration> |
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337 <Iteration_iter-num>14</Iteration_iter-num> |
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338 <Iteration_query-ID>Query_2</Iteration_query-ID> |
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339 <Iteration_query-def>Reverse_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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340 <Iteration_query-len>20</Iteration_query-len> |
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341 <Iteration_hits> |
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342 </Iteration_hits> |
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343 <Iteration_stat> |
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344 <Statistics> |
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345 <Statistics_db-num>0</Statistics_db-num> |
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346 <Statistics_db-len>0</Statistics_db-len> |
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347 <Statistics_hsp-len>8</Statistics_hsp-len> |
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348 <Statistics_eff-space>12312</Statistics_eff-space> |
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349 <Statistics_kappa>0.41</Statistics_kappa> |
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350 <Statistics_lambda>0.625</Statistics_lambda> |
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351 <Statistics_entropy>0.78</Statistics_entropy> |
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352 </Statistics> |
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353 </Iteration_stat> |
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354 <Iteration_message>No hits found</Iteration_message> |
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355 </Iteration> |
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356 <Iteration> |
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357 <Iteration_iter-num>15</Iteration_iter-num> |
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358 <Iteration_query-ID>Query_2</Iteration_query-ID> |
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359 <Iteration_query-def>Reverse_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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360 <Iteration_query-len>20</Iteration_query-len> |
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361 <Iteration_hits> |
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362 </Iteration_hits> |
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363 <Iteration_stat> |
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364 <Statistics> |
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365 <Statistics_db-num>0</Statistics_db-num> |
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366 <Statistics_db-len>0</Statistics_db-len> |
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367 <Statistics_hsp-len>8</Statistics_hsp-len> |
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368 <Statistics_eff-space>12312</Statistics_eff-space> |
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369 <Statistics_kappa>0.41</Statistics_kappa> |
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370 <Statistics_lambda>0.625</Statistics_lambda> |
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371 <Statistics_entropy>0.78</Statistics_entropy> |
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372 </Statistics> |
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373 </Iteration_stat> |
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374 <Iteration_message>No hits found</Iteration_message> |
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375 </Iteration> |
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376 <Iteration> |
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377 <Iteration_iter-num>16</Iteration_iter-num> |
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378 <Iteration_query-ID>Query_2</Iteration_query-ID> |
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379 <Iteration_query-def>Reverse_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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380 <Iteration_query-len>20</Iteration_query-len> |
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381 <Iteration_hits> |
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382 </Iteration_hits> |
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383 <Iteration_stat> |
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384 <Statistics> |
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385 <Statistics_db-num>0</Statistics_db-num> |
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386 <Statistics_db-len>0</Statistics_db-len> |
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387 <Statistics_hsp-len>8</Statistics_hsp-len> |
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388 <Statistics_eff-space>12312</Statistics_eff-space> |
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389 <Statistics_kappa>0.41</Statistics_kappa> |
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390 <Statistics_lambda>0.625</Statistics_lambda> |
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391 <Statistics_entropy>0.78</Statistics_entropy> |
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392 </Statistics> |
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393 </Iteration_stat> |
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394 <Iteration_message>No hits found</Iteration_message> |
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395 </Iteration> |
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396 <Iteration> |
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397 <Iteration_iter-num>17</Iteration_iter-num> |
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398 <Iteration_query-ID>Query_3</Iteration_query-ID> |
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399 <Iteration_query-def>Probe|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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400 <Iteration_query-len>20</Iteration_query-len> |
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401 <Iteration_hits> |
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402 </Iteration_hits> |
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403 <Iteration_stat> |
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404 <Statistics> |
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405 <Statistics_db-num>0</Statistics_db-num> |
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406 <Statistics_db-len>0</Statistics_db-len> |
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407 <Statistics_hsp-len>8</Statistics_hsp-len> |
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408 <Statistics_eff-space>12312</Statistics_eff-space> |
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409 <Statistics_kappa>0.41</Statistics_kappa> |
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410 <Statistics_lambda>0.625</Statistics_lambda> |
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411 <Statistics_entropy>0.78</Statistics_entropy> |
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412 </Statistics> |
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413 </Iteration_stat> |
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414 <Iteration_message>No hits found</Iteration_message> |
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415 </Iteration> |
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416 <Iteration> |
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417 <Iteration_iter-num>18</Iteration_iter-num> |
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418 <Iteration_query-ID>Query_3</Iteration_query-ID> |
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419 <Iteration_query-def>Probe|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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420 <Iteration_query-len>20</Iteration_query-len> |
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421 <Iteration_hits> |
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422 <Hit> |
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423 <Hit_num>1</Hit_num> |
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424 <Hit_id>Subject_2</Hit_id> |
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425 <Hit_def>AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3'UTR/plant_junction_region.|-9105899556052450000</Hit_def> |
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426 <Hit_accession>Subject_2</Hit_accession> |
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427 <Hit_len>1045</Hit_len> |
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428 <Hit_hsps> |
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429 <Hsp> |
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430 <Hsp_num>1</Hsp_num> |
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431 <Hsp_bit-score>31.9436</Hsp_bit-score> |
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432 <Hsp_score>34</Hsp_score> |
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433 <Hsp_evalue>2.98095e-06</Hsp_evalue> |
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434 <Hsp_query-from>4</Hsp_query-from> |
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435 <Hsp_query-to>20</Hsp_query-to> |
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436 <Hsp_hit-from>2</Hsp_hit-from> |
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437 <Hsp_hit-to>18</Hsp_hit-to> |
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438 <Hsp_query-frame>1</Hsp_query-frame> |
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439 <Hsp_hit-frame>1</Hsp_hit-frame> |
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440 <Hsp_identity>17</Hsp_identity> |
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441 <Hsp_positive>17</Hsp_positive> |
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442 <Hsp_gaps>0</Hsp_gaps> |
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443 <Hsp_align-len>17</Hsp_align-len> |
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444 <Hsp_qseq>GCGCGGTGTCATCTATG</Hsp_qseq> |
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445 <Hsp_hseq>GCGCGGTGTCATCTATG</Hsp_hseq> |
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446 <Hsp_midline>|||||||||||||||||</Hsp_midline> |
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447 </Hsp> |
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448 </Hit_hsps> |
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449 </Hit> |
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450 </Iteration_hits> |
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451 <Iteration_stat> |
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452 <Statistics> |
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453 <Statistics_db-num>0</Statistics_db-num> |
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454 <Statistics_db-len>0</Statistics_db-len> |
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455 <Statistics_hsp-len>8</Statistics_hsp-len> |
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456 <Statistics_eff-space>12312</Statistics_eff-space> |
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457 <Statistics_kappa>0.41</Statistics_kappa> |
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458 <Statistics_lambda>0.625</Statistics_lambda> |
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459 <Statistics_entropy>0.78</Statistics_entropy> |
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460 </Statistics> |
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461 </Iteration_stat> |
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462 </Iteration> |
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463 <Iteration> |
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464 <Iteration_iter-num>19</Iteration_iter-num> |
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465 <Iteration_query-ID>Query_3</Iteration_query-ID> |
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466 <Iteration_query-def>Probe|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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467 <Iteration_query-len>20</Iteration_query-len> |
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468 <Iteration_hits> |
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469 <Hit> |
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470 <Hit_num>1</Hit_num> |
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471 <Hit_id>Subject_3</Hit_id> |
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472 <Hit_def>DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000</Hit_def> |
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473 <Hit_accession>Subject_3</Hit_accession> |
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474 <Hit_len>323</Hit_len> |
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475 <Hit_hsps> |
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476 <Hsp> |
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477 <Hsp_num>1</Hsp_num> |
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478 <Hsp_bit-score>37.3537</Hsp_bit-score> |
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479 <Hsp_score>40</Hsp_score> |
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480 <Hsp_evalue>7.01052e-08</Hsp_evalue> |
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481 <Hsp_query-from>1</Hsp_query-from> |
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482 <Hsp_query-to>20</Hsp_query-to> |
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483 <Hsp_hit-from>224</Hsp_hit-from> |
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484 <Hsp_hit-to>243</Hsp_hit-to> |
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485 <Hsp_query-frame>1</Hsp_query-frame> |
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486 <Hsp_hit-frame>1</Hsp_hit-frame> |
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487 <Hsp_identity>20</Hsp_identity> |
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488 <Hsp_positive>20</Hsp_positive> |
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489 <Hsp_gaps>0</Hsp_gaps> |
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490 <Hsp_align-len>20</Hsp_align-len> |
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491 <Hsp_qseq>CGCGCGCGGTGTCATCTATG</Hsp_qseq> |
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492 <Hsp_hseq>CGCGCGCGGTGTCATCTATG</Hsp_hseq> |
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493 <Hsp_midline>||||||||||||||||||||</Hsp_midline> |
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494 </Hsp> |
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495 </Hit_hsps> |
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496 </Hit> |
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497 </Iteration_hits> |
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498 <Iteration_stat> |
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499 <Statistics> |
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500 <Statistics_db-num>0</Statistics_db-num> |
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501 <Statistics_db-len>0</Statistics_db-len> |
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502 <Statistics_hsp-len>8</Statistics_hsp-len> |
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503 <Statistics_eff-space>12312</Statistics_eff-space> |
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504 <Statistics_kappa>0.41</Statistics_kappa> |
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505 <Statistics_lambda>0.625</Statistics_lambda> |
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506 <Statistics_entropy>0.78</Statistics_entropy> |
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507 </Statistics> |
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508 </Iteration_stat> |
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509 </Iteration> |
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510 <Iteration> |
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511 <Iteration_iter-num>20</Iteration_iter-num> |
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512 <Iteration_query-ID>Query_3</Iteration_query-ID> |
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513 <Iteration_query-def>Probe|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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514 <Iteration_query-len>20</Iteration_query-len> |
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515 <Iteration_hits> |
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516 </Iteration_hits> |
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517 <Iteration_stat> |
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518 <Statistics> |
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519 <Statistics_db-num>0</Statistics_db-num> |
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520 <Statistics_db-len>0</Statistics_db-len> |
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521 <Statistics_hsp-len>8</Statistics_hsp-len> |
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522 <Statistics_eff-space>12312</Statistics_eff-space> |
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523 <Statistics_kappa>0.41</Statistics_kappa> |
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524 <Statistics_lambda>0.625</Statistics_lambda> |
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525 <Statistics_entropy>0.78</Statistics_entropy> |
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526 </Statistics> |
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527 </Iteration_stat> |
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528 <Iteration_message>No hits found</Iteration_message> |
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529 </Iteration> |
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530 <Iteration> |
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531 <Iteration_iter-num>21</Iteration_iter-num> |
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532 <Iteration_query-ID>Query_3</Iteration_query-ID> |
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533 <Iteration_query-def>Probe|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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534 <Iteration_query-len>20</Iteration_query-len> |
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535 <Iteration_hits> |
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536 </Iteration_hits> |
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537 <Iteration_stat> |
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538 <Statistics> |
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539 <Statistics_db-num>0</Statistics_db-num> |
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540 <Statistics_db-len>0</Statistics_db-len> |
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541 <Statistics_hsp-len>8</Statistics_hsp-len> |
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542 <Statistics_eff-space>12312</Statistics_eff-space> |
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543 <Statistics_kappa>0.41</Statistics_kappa> |
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544 <Statistics_lambda>0.625</Statistics_lambda> |
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545 <Statistics_entropy>0.78</Statistics_entropy> |
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546 </Statistics> |
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547 </Iteration_stat> |
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548 <Iteration_message>No hits found</Iteration_message> |
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549 </Iteration> |
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550 <Iteration> |
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551 <Iteration_iter-num>22</Iteration_iter-num> |
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552 <Iteration_query-ID>Query_3</Iteration_query-ID> |
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553 <Iteration_query-def>Probe|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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554 <Iteration_query-len>20</Iteration_query-len> |
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555 <Iteration_hits> |
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556 <Hit> |
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557 <Hit_num>1</Hit_num> |
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558 <Hit_id>Subject_6</Hit_id> |
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559 <Hit_def>AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000</Hit_def> |
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560 <Hit_accession>Subject_6</Hit_accession> |
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561 <Hit_len>2457</Hit_len> |
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562 <Hit_hsps> |
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563 <Hsp> |
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564 <Hsp_num>1</Hsp_num> |
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565 <Hsp_bit-score>37.3537</Hsp_bit-score> |
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566 <Hsp_score>40</Hsp_score> |
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567 <Hsp_evalue>7.01052e-08</Hsp_evalue> |
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568 <Hsp_query-from>1</Hsp_query-from> |
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569 <Hsp_query-to>20</Hsp_query-to> |
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570 <Hsp_hit-from>2143</Hsp_hit-from> |
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571 <Hsp_hit-to>2162</Hsp_hit-to> |
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572 <Hsp_query-frame>1</Hsp_query-frame> |
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573 <Hsp_hit-frame>1</Hsp_hit-frame> |
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574 <Hsp_identity>20</Hsp_identity> |
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575 <Hsp_positive>20</Hsp_positive> |
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576 <Hsp_gaps>0</Hsp_gaps> |
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577 <Hsp_align-len>20</Hsp_align-len> |
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578 <Hsp_qseq>CGCGCGCGGTGTCATCTATG</Hsp_qseq> |
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579 <Hsp_hseq>CGCGCGCGGTGTCATCTATG</Hsp_hseq> |
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580 <Hsp_midline>||||||||||||||||||||</Hsp_midline> |
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581 </Hsp> |
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582 </Hit_hsps> |
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583 </Hit> |
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584 </Iteration_hits> |
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585 <Iteration_stat> |
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586 <Statistics> |
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587 <Statistics_db-num>0</Statistics_db-num> |
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588 <Statistics_db-len>0</Statistics_db-len> |
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589 <Statistics_hsp-len>8</Statistics_hsp-len> |
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590 <Statistics_eff-space>12312</Statistics_eff-space> |
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591 <Statistics_kappa>0.41</Statistics_kappa> |
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592 <Statistics_lambda>0.625</Statistics_lambda> |
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593 <Statistics_entropy>0.78</Statistics_entropy> |
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|
594 </Statistics> |
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595 </Iteration_stat> |
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596 </Iteration> |
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597 <Iteration> |
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598 <Iteration_iter-num>23</Iteration_iter-num> |
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599 <Iteration_query-ID>Query_3</Iteration_query-ID> |
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600 <Iteration_query-def>Probe|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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601 <Iteration_query-len>20</Iteration_query-len> |
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602 <Iteration_hits> |
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603 </Iteration_hits> |
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604 <Iteration_stat> |
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605 <Statistics> |
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606 <Statistics_db-num>0</Statistics_db-num> |
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607 <Statistics_db-len>0</Statistics_db-len> |
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608 <Statistics_hsp-len>8</Statistics_hsp-len> |
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|
609 <Statistics_eff-space>12312</Statistics_eff-space> |
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610 <Statistics_kappa>0.41</Statistics_kappa> |
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611 <Statistics_lambda>0.625</Statistics_lambda> |
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612 <Statistics_entropy>0.78</Statistics_entropy> |
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613 </Statistics> |
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614 </Iteration_stat> |
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615 <Iteration_message>No hits found</Iteration_message> |
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616 </Iteration> |
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617 <Iteration> |
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618 <Iteration_iter-num>24</Iteration_iter-num> |
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619 <Iteration_query-ID>Query_3</Iteration_query-ID> |
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620 <Iteration_query-def>Probe|NOST-Spec_(Genetic_ID)</Iteration_query-def> |
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621 <Iteration_query-len>20</Iteration_query-len> |
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622 <Iteration_hits> |
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623 </Iteration_hits> |
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624 <Iteration_stat> |
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625 <Statistics> |
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626 <Statistics_db-num>0</Statistics_db-num> |
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627 <Statistics_db-len>0</Statistics_db-len> |
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628 <Statistics_hsp-len>8</Statistics_hsp-len> |
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629 <Statistics_eff-space>12312</Statistics_eff-space> |
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630 <Statistics_kappa>0.41</Statistics_kappa> |
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631 <Statistics_lambda>0.625</Statistics_lambda> |
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632 <Statistics_entropy>0.78</Statistics_entropy> |
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633 </Statistics> |
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634 </Iteration_stat> |
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635 <Iteration_message>No hits found</Iteration_message> |
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636 </Iteration> |
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637 <Iteration> |
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638 <Iteration_iter-num>25</Iteration_iter-num> |
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639 <Iteration_query-ID>Query_4</Iteration_query-ID> |
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640 <Iteration_query-def>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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641 <Iteration_query-len>24</Iteration_query-len> |
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642 <Iteration_hits> |
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643 </Iteration_hits> |
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644 <Iteration_stat> |
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645 <Statistics> |
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646 <Statistics_db-num>0</Statistics_db-num> |
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647 <Statistics_db-len>0</Statistics_db-len> |
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648 <Statistics_hsp-len>9</Statistics_hsp-len> |
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649 <Statistics_eff-space>15375</Statistics_eff-space> |
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650 <Statistics_kappa>0.41</Statistics_kappa> |
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651 <Statistics_lambda>0.625</Statistics_lambda> |
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652 <Statistics_entropy>0.78</Statistics_entropy> |
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653 </Statistics> |
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654 </Iteration_stat> |
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655 <Iteration_message>No hits found</Iteration_message> |
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656 </Iteration> |
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657 <Iteration> |
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658 <Iteration_iter-num>26</Iteration_iter-num> |
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659 <Iteration_query-ID>Query_4</Iteration_query-ID> |
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660 <Iteration_query-def>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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661 <Iteration_query-len>24</Iteration_query-len> |
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662 <Iteration_hits> |
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663 </Iteration_hits> |
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664 <Iteration_stat> |
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665 <Statistics> |
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666 <Statistics_db-num>0</Statistics_db-num> |
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667 <Statistics_db-len>0</Statistics_db-len> |
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668 <Statistics_hsp-len>9</Statistics_hsp-len> |
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669 <Statistics_eff-space>15375</Statistics_eff-space> |
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670 <Statistics_kappa>0.41</Statistics_kappa> |
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671 <Statistics_lambda>0.625</Statistics_lambda> |
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672 <Statistics_entropy>0.78</Statistics_entropy> |
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673 </Statistics> |
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674 </Iteration_stat> |
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675 <Iteration_message>No hits found</Iteration_message> |
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676 </Iteration> |
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677 <Iteration> |
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678 <Iteration_iter-num>27</Iteration_iter-num> |
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679 <Iteration_query-ID>Query_4</Iteration_query-ID> |
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680 <Iteration_query-def>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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681 <Iteration_query-len>24</Iteration_query-len> |
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682 <Iteration_hits> |
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683 </Iteration_hits> |
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684 <Iteration_stat> |
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685 <Statistics> |
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686 <Statistics_db-num>0</Statistics_db-num> |
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687 <Statistics_db-len>0</Statistics_db-len> |
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688 <Statistics_hsp-len>9</Statistics_hsp-len> |
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689 <Statistics_eff-space>15375</Statistics_eff-space> |
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690 <Statistics_kappa>0.41</Statistics_kappa> |
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691 <Statistics_lambda>0.625</Statistics_lambda> |
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692 <Statistics_entropy>0.78</Statistics_entropy> |
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693 </Statistics> |
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694 </Iteration_stat> |
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695 <Iteration_message>No hits found</Iteration_message> |
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696 </Iteration> |
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697 <Iteration> |
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698 <Iteration_iter-num>28</Iteration_iter-num> |
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699 <Iteration_query-ID>Query_4</Iteration_query-ID> |
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parents:
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|
700 <Iteration_query-def>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
701 <Iteration_query-len>24</Iteration_query-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
702 <Iteration_hits> |
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parents:
diff
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|
703 </Iteration_hits> |
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parents:
diff
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|
704 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
705 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
706 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
707 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
708 <Statistics_hsp-len>9</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
709 <Statistics_eff-space>15375</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
710 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
711 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
712 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
713 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
714 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
715 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
716 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
717 <Iteration> |
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|
718 <Iteration_iter-num>29</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
719 <Iteration_query-ID>Query_4</Iteration_query-ID> |
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|
720 <Iteration_query-def>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
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|
721 <Iteration_query-len>24</Iteration_query-len> |
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parents:
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|
722 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
723 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
724 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
725 <Statistics> |
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|
726 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
727 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
728 <Statistics_hsp-len>9</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
729 <Statistics_eff-space>15375</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
730 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
731 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
732 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
733 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
734 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
735 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
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|
736 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
737 <Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
738 <Iteration_iter-num>30</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
739 <Iteration_query-ID>Query_4</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
740 <Iteration_query-def>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
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|
741 <Iteration_query-len>24</Iteration_query-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
742 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
743 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
744 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
745 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
746 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
747 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
748 <Statistics_hsp-len>9</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
749 <Statistics_eff-space>15375</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
750 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
751 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
752 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
753 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
754 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
755 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
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|
756 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
757 <Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
758 <Iteration_iter-num>31</Iteration_iter-num> |
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parents:
diff
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|
759 <Iteration_query-ID>Query_4</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
760 <Iteration_query-def>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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|
761 <Iteration_query-len>24</Iteration_query-len> |
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parents:
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|
762 <Iteration_hits> |
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|
763 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
764 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
765 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
766 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
767 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
768 <Statistics_hsp-len>9</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
769 <Statistics_eff-space>15375</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
770 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
771 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
772 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
773 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
774 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
775 <Iteration_message>No hits found</Iteration_message> |
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|
776 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
777 <Iteration> |
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|
778 <Iteration_iter-num>32</Iteration_iter-num> |
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|
779 <Iteration_query-ID>Query_4</Iteration_query-ID> |
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|
780 <Iteration_query-def>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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|
781 <Iteration_query-len>24</Iteration_query-len> |
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|
782 <Iteration_hits> |
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|
783 </Iteration_hits> |
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|
784 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
785 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
786 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
787 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
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|
788 <Statistics_hsp-len>9</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
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|
789 <Statistics_eff-space>15375</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
790 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
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|
791 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
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|
792 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
793 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
794 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
795 <Iteration_message>No hits found</Iteration_message> |
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|
796 </Iteration> |
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|
797 <Iteration> |
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|
798 <Iteration_iter-num>33</Iteration_iter-num> |
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|
799 <Iteration_query-ID>Query_5</Iteration_query-ID> |
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|
800 <Iteration_query-def>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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|
801 <Iteration_query-len>20</Iteration_query-len> |
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|
802 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
803 </Iteration_hits> |
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|
804 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
805 <Statistics> |
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|
806 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
807 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
808 <Statistics_hsp-len>8</Statistics_hsp-len> |
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parents:
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|
809 <Statistics_eff-space>12312</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
810 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
811 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
812 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
813 </Statistics> |
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|
814 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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changeset
|
815 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
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|
816 </Iteration> |
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|
817 <Iteration> |
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|
818 <Iteration_iter-num>34</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
819 <Iteration_query-ID>Query_5</Iteration_query-ID> |
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parents:
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|
820 <Iteration_query-def>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
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|
821 <Iteration_query-len>20</Iteration_query-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
822 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
823 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
824 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
825 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
826 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
827 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
828 <Statistics_hsp-len>8</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
829 <Statistics_eff-space>12312</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
830 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
831 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
832 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
833 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
834 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
835 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
836 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
837 <Iteration> |
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|
838 <Iteration_iter-num>35</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
839 <Iteration_query-ID>Query_5</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
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|
840 <Iteration_query-def>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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|
841 <Iteration_query-len>20</Iteration_query-len> |
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parents:
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|
842 <Iteration_hits> |
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|
843 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
844 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
845 <Statistics> |
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|
846 <Statistics_db-num>0</Statistics_db-num> |
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|
847 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
848 <Statistics_hsp-len>8</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
849 <Statistics_eff-space>12312</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
850 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
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|
851 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
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|
852 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
853 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
854 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
855 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
856 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
857 <Iteration> |
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|
858 <Iteration_iter-num>36</Iteration_iter-num> |
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parents:
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|
859 <Iteration_query-ID>Query_5</Iteration_query-ID> |
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parents:
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|
860 <Iteration_query-def>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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|
861 <Iteration_query-len>20</Iteration_query-len> |
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parents:
diff
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|
862 <Iteration_hits> |
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|
863 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
864 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
865 <Statistics> |
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|
866 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
867 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
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|
868 <Statistics_hsp-len>8</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
869 <Statistics_eff-space>12312</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
870 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
871 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
872 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
873 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
874 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
875 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
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|
876 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
877 <Iteration> |
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|
878 <Iteration_iter-num>37</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
879 <Iteration_query-ID>Query_5</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
880 <Iteration_query-def>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
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|
881 <Iteration_query-len>20</Iteration_query-len> |
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parents:
diff
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|
882 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
883 </Iteration_hits> |
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|
884 <Iteration_stat> |
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|
885 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
886 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
887 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
888 <Statistics_hsp-len>8</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
889 <Statistics_eff-space>12312</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
890 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
891 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
892 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
893 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
894 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
895 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
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|
896 </Iteration> |
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parents:
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|
897 <Iteration> |
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|
898 <Iteration_iter-num>38</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
899 <Iteration_query-ID>Query_5</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
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|
900 <Iteration_query-def>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
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|
901 <Iteration_query-len>20</Iteration_query-len> |
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diff
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|
902 <Iteration_hits> |
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|
903 </Iteration_hits> |
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|
904 <Iteration_stat> |
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|
905 <Statistics> |
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|
906 <Statistics_db-num>0</Statistics_db-num> |
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|
907 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
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|
908 <Statistics_hsp-len>8</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
909 <Statistics_eff-space>12312</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
910 <Statistics_kappa>0.41</Statistics_kappa> |
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diff
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|
911 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
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|
912 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
913 </Statistics> |
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|
914 </Iteration_stat> |
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|
915 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
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|
916 </Iteration> |
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|
917 <Iteration> |
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|
918 <Iteration_iter-num>39</Iteration_iter-num> |
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|
919 <Iteration_query-ID>Query_5</Iteration_query-ID> |
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|
920 <Iteration_query-def>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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|
921 <Iteration_query-len>20</Iteration_query-len> |
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|
922 <Iteration_hits> |
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|
923 </Iteration_hits> |
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|
924 <Iteration_stat> |
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|
925 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
926 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
927 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
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|
928 <Statistics_hsp-len>8</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
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|
929 <Statistics_eff-space>12312</Statistics_eff-space> |
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parents:
diff
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|
930 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
931 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
932 <Statistics_entropy>0.78</Statistics_entropy> |
b77934f57522
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
933 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
934 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
935 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
936 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
937 <Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
938 <Iteration_iter-num>40</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
939 <Iteration_query-ID>Query_5</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
940 <Iteration_query-def>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
941 <Iteration_query-len>20</Iteration_query-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
942 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
943 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
944 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
945 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
946 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
947 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
948 <Statistics_hsp-len>8</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
949 <Statistics_eff-space>12312</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
950 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
951 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
952 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
953 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
954 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
955 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
956 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
957 <Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
958 <Iteration_iter-num>41</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
959 <Iteration_query-ID>Query_6</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
960 <Iteration_query-def>Probe|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
961 <Iteration_query-len>25</Iteration_query-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
962 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
963 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
964 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
965 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
966 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
967 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
968 <Statistics_hsp-len>9</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
969 <Statistics_eff-space>16400</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
970 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
971 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
972 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
973 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
974 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
975 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
976 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
977 <Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
978 <Iteration_iter-num>42</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
979 <Iteration_query-ID>Query_6</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
980 <Iteration_query-def>Probe|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
981 <Iteration_query-len>25</Iteration_query-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
982 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
983 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
984 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
985 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
986 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
987 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
988 <Statistics_hsp-len>9</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
989 <Statistics_eff-space>16400</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
990 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
991 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
992 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
993 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
994 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
995 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
996 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
997 <Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
998 <Iteration_iter-num>43</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
999 <Iteration_query-ID>Query_6</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1000 <Iteration_query-def>Probe|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1001 <Iteration_query-len>25</Iteration_query-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1002 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
1003 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1004 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1005 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1006 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1007 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1008 <Statistics_hsp-len>9</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1009 <Statistics_eff-space>16400</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1010 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1011 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1012 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1013 </Statistics> |
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|
1014 </Iteration_stat> |
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|
1015 <Iteration_message>No hits found</Iteration_message> |
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|
1016 </Iteration> |
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|
1017 <Iteration> |
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|
1018 <Iteration_iter-num>44</Iteration_iter-num> |
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|
1019 <Iteration_query-ID>Query_6</Iteration_query-ID> |
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|
1020 <Iteration_query-def>Probe|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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|
1021 <Iteration_query-len>25</Iteration_query-len> |
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diff
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|
1022 <Iteration_hits> |
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|
1023 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1024 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
1025 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1026 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1027 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
1028 <Statistics_hsp-len>9</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1029 <Statistics_eff-space>16400</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1030 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1031 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1032 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1033 </Statistics> |
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|
1034 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1035 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1036 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1037 <Iteration> |
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|
1038 <Iteration_iter-num>45</Iteration_iter-num> |
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|
1039 <Iteration_query-ID>Query_6</Iteration_query-ID> |
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parents:
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|
1040 <Iteration_query-def>Probe|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1041 <Iteration_query-len>25</Iteration_query-len> |
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parents:
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|
1042 <Iteration_hits> |
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|
1043 </Iteration_hits> |
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|
1044 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1045 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1046 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1047 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1048 <Statistics_hsp-len>9</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1049 <Statistics_eff-space>16400</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1050 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1051 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1052 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1053 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1054 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1055 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1056 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1057 <Iteration> |
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|
1058 <Iteration_iter-num>46</Iteration_iter-num> |
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parents:
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|
1059 <Iteration_query-ID>Query_6</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1060 <Iteration_query-def>Probe|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
1061 <Iteration_query-len>25</Iteration_query-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1062 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1063 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1064 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1065 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1066 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1067 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1068 <Statistics_hsp-len>9</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1069 <Statistics_eff-space>16400</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1070 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1071 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1072 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1073 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1074 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1075 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1076 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1077 <Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1078 <Iteration_iter-num>47</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1079 <Iteration_query-ID>Query_6</Iteration_query-ID> |
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parents:
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|
1080 <Iteration_query-def>Probe|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1081 <Iteration_query-len>25</Iteration_query-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1082 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1083 <Hit> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1084 <Hit_num>1</Hit_num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1085 <Hit_id>Subject_7</Hit_id> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1086 <Hit_def>AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000</Hit_def> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1087 <Hit_accession>Subject_7</Hit_accession> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1088 <Hit_len>4180</Hit_len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1089 <Hit_hsps> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1090 <Hsp> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1091 <Hsp_num>1</Hsp_num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1092 <Hsp_bit-score>37.3537</Hsp_bit-score> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1093 <Hsp_score>40</Hsp_score> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1094 <Hsp_evalue>9.33825e-08</Hsp_evalue> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1095 <Hsp_query-from>1</Hsp_query-from> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1096 <Hsp_query-to>25</Hsp_query-to> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1097 <Hsp_hit-from>1541</Hsp_hit-from> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1098 <Hsp_hit-to>1565</Hsp_hit-to> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1099 <Hsp_query-frame>1</Hsp_query-frame> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1100 <Hsp_hit-frame>1</Hsp_hit-frame> |
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|
1101 <Hsp_identity>23</Hsp_identity> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1102 <Hsp_positive>23</Hsp_positive> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1103 <Hsp_gaps>0</Hsp_gaps> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1104 <Hsp_align-len>25</Hsp_align-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1105 <Hsp_qseq>ACATGAACAGCGCCTTGACCACAGC</Hsp_qseq> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1106 <Hsp_hseq>ACATGAACAGCGCCCTGACCACCGC</Hsp_hseq> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
1107 <Hsp_midline>|||||||||||||| ||||||| ||</Hsp_midline> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1108 </Hsp> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1109 </Hit_hsps> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1110 </Hit> |
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|
1111 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1112 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1113 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1114 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1115 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1116 <Statistics_hsp-len>9</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1117 <Statistics_eff-space>16400</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1118 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1119 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1120 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1121 </Statistics> |
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|
1122 </Iteration_stat> |
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|
1123 </Iteration> |
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|
1124 <Iteration> |
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|
1125 <Iteration_iter-num>48</Iteration_iter-num> |
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|
1126 <Iteration_query-ID>Query_6</Iteration_query-ID> |
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1127 <Iteration_query-def>Probe|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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|
1128 <Iteration_query-len>25</Iteration_query-len> |
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|
1129 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1130 <Hit> |
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1131 <Hit_num>1</Hit_num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1132 <Hit_id>Subject_8</Hit_id> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1133 <Hit_def>EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000</Hit_def> |
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|
1134 <Hit_accession>Subject_8</Hit_accession> |
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|
1135 <Hit_len>4983</Hit_len> |
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|
1136 <Hit_hsps> |
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|
1137 <Hsp> |
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|
1138 <Hsp_num>1</Hsp_num> |
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|
1139 <Hsp_bit-score>37.3537</Hsp_bit-score> |
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|
1140 <Hsp_score>40</Hsp_score> |
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1141 <Hsp_evalue>9.33825e-08</Hsp_evalue> |
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|
1142 <Hsp_query-from>1</Hsp_query-from> |
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|
1143 <Hsp_query-to>25</Hsp_query-to> |
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|
1144 <Hsp_hit-from>2344</Hsp_hit-from> |
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|
1145 <Hsp_hit-to>2368</Hsp_hit-to> |
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|
1146 <Hsp_query-frame>1</Hsp_query-frame> |
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1147 <Hsp_hit-frame>1</Hsp_hit-frame> |
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|
1148 <Hsp_identity>23</Hsp_identity> |
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|
1149 <Hsp_positive>23</Hsp_positive> |
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|
1150 <Hsp_gaps>0</Hsp_gaps> |
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|
1151 <Hsp_align-len>25</Hsp_align-len> |
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|
1152 <Hsp_qseq>ACATGAACAGCGCCTTGACCACAGC</Hsp_qseq> |
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|
1153 <Hsp_hseq>ACATGAACAGCGCCCTGACCACCGC</Hsp_hseq> |
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|
1154 <Hsp_midline>|||||||||||||| ||||||| ||</Hsp_midline> |
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|
1155 </Hsp> |
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|
1156 </Hit_hsps> |
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|
1157 </Hit> |
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|
1158 </Iteration_hits> |
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|
1159 <Iteration_stat> |
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|
1160 <Statistics> |
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|
1161 <Statistics_db-num>0</Statistics_db-num> |
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|
1162 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1163 <Statistics_hsp-len>9</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1164 <Statistics_eff-space>16400</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1165 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1166 <Statistics_lambda>0.625</Statistics_lambda> |
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add more example xmls, move them to a subdirectory
Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1167 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1168 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1169 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1170 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1171 <Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1172 <Iteration_iter-num>49</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1173 <Iteration_query-ID>Query_7</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1174 <Iteration_query-def>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1175 <Iteration_query-len>74</Iteration_query-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1176 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1177 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1178 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1179 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1180 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1181 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1182 <Statistics_hsp-len>11</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1183 <Statistics_eff-space>64449</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1184 <Statistics_kappa>0.41</Statistics_kappa> |
b77934f57522
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1185 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1186 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1187 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1188 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1189 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1190 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1191 <Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1192 <Iteration_iter-num>50</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1193 <Iteration_query-ID>Query_7</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1194 <Iteration_query-def>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1195 <Iteration_query-len>74</Iteration_query-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1196 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1197 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1198 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1199 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1200 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1201 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1202 <Statistics_hsp-len>11</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1203 <Statistics_eff-space>64449</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1204 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1205 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1206 <Statistics_entropy>0.78</Statistics_entropy> |
b77934f57522
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1207 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1208 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1209 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1210 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1211 <Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1212 <Iteration_iter-num>51</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1213 <Iteration_query-ID>Query_7</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1214 <Iteration_query-def>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1215 <Iteration_query-len>74</Iteration_query-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1216 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1217 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1218 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1219 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1220 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1221 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1222 <Statistics_hsp-len>11</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1223 <Statistics_eff-space>64449</Statistics_eff-space> |
b77934f57522
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1224 <Statistics_kappa>0.41</Statistics_kappa> |
b77934f57522
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1225 <Statistics_lambda>0.625</Statistics_lambda> |
b77934f57522
add more example xmls, move them to a subdirectory
Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1226 <Statistics_entropy>0.78</Statistics_entropy> |
b77934f57522
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1227 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1228 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1229 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1230 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1231 <Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1232 <Iteration_iter-num>52</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1233 <Iteration_query-ID>Query_7</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1234 <Iteration_query-def>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1235 <Iteration_query-len>74</Iteration_query-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1236 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1237 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1238 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1239 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1240 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1241 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1242 <Statistics_hsp-len>11</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1243 <Statistics_eff-space>64449</Statistics_eff-space> |
b77934f57522
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1244 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1245 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1246 <Statistics_entropy>0.78</Statistics_entropy> |
b77934f57522
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1247 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1248 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
1249 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1250 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
1251 <Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1252 <Iteration_iter-num>53</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1253 <Iteration_query-ID>Query_7</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1254 <Iteration_query-def>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
1255 <Iteration_query-len>74</Iteration_query-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1256 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1257 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1258 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
1259 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1260 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
1261 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
1262 <Statistics_hsp-len>11</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
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diff
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|
1263 <Statistics_eff-space>64449</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1264 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1265 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1266 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1267 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1268 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1269 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1270 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1271 <Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1272 <Iteration_iter-num>54</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1273 <Iteration_query-ID>Query_7</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1274 <Iteration_query-def>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1275 <Iteration_query-len>74</Iteration_query-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1276 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1277 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1278 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1279 <Statistics> |
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|
1280 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1281 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1282 <Statistics_hsp-len>11</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1283 <Statistics_eff-space>64449</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1284 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1285 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1286 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1287 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1288 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1289 <Iteration_message>No hits found</Iteration_message> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1290 </Iteration> |
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|
1291 <Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1292 <Iteration_iter-num>55</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1293 <Iteration_query-ID>Query_7</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1294 <Iteration_query-def>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1295 <Iteration_query-len>74</Iteration_query-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1296 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1297 <Hit> |
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|
1298 <Hit_num>1</Hit_num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1299 <Hit_id>Subject_7</Hit_id> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1300 <Hit_def>AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000</Hit_def> |
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|
1301 <Hit_accession>Subject_7</Hit_accession> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1302 <Hit_len>4180</Hit_len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1303 <Hit_hsps> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1304 <Hsp> |
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|
1305 <Hsp_num>1</Hsp_num> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1306 <Hsp_bit-score>89.6514</Hsp_bit-score> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1307 <Hsp_score>98</Hsp_score> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1308 <Hsp_evalue>6.62923e-23</Hsp_evalue> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1309 <Hsp_query-from>1</Hsp_query-from> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1310 <Hsp_query-to>74</Hsp_query-to> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1311 <Hsp_hit-from>1516</Hsp_hit-from> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1312 <Hsp_hit-to>1589</Hsp_hit-to> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1313 <Hsp_query-frame>1</Hsp_query-frame> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1314 <Hsp_hit-frame>1</Hsp_hit-frame> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1315 <Hsp_identity>64</Hsp_identity> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1316 <Hsp_positive>64</Hsp_positive> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1317 <Hsp_gaps>0</Hsp_gaps> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1318 <Hsp_align-len>74</Hsp_align-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1319 <Hsp_qseq>GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTGTTCGCAGTCCAGAA</Hsp_qseq> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1320 <Hsp_hseq>GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTCTTCGCCGTCCAGAA</Hsp_hseq> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1321 <Hsp_midline>||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| | ||||| ||||||||</Hsp_midline> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1322 </Hsp> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1323 </Hit_hsps> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1324 </Hit> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1325 </Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1326 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1327 <Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1328 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1329 <Statistics_db-len>0</Statistics_db-len> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1330 <Statistics_hsp-len>11</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1331 <Statistics_eff-space>64449</Statistics_eff-space> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1332 <Statistics_kappa>0.41</Statistics_kappa> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1333 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1334 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
diff
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|
1335 </Statistics> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1336 </Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1337 </Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1338 <Iteration> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1339 <Iteration_iter-num>56</Iteration_iter-num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1340 <Iteration_query-ID>Query_7</Iteration_query-ID> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1341 <Iteration_query-def>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1342 <Iteration_query-len>74</Iteration_query-len> |
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Jan Kanis <jan.code@jankanis.nl>
parents:
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|
1343 <Iteration_hits> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1344 <Hit> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1345 <Hit_num>1</Hit_num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1346 <Hit_id>Subject_8</Hit_id> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1347 <Hit_def>EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000</Hit_def> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1348 <Hit_accession>Subject_8</Hit_accession> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1349 <Hit_len>4983</Hit_len> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1350 <Hit_hsps> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1351 <Hsp> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1352 <Hsp_num>1</Hsp_num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1353 <Hsp_bit-score>89.6514</Hsp_bit-score> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1354 <Hsp_score>98</Hsp_score> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1355 <Hsp_evalue>6.62923e-23</Hsp_evalue> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1356 <Hsp_query-from>1</Hsp_query-from> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1357 <Hsp_query-to>74</Hsp_query-to> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1358 <Hsp_hit-from>2319</Hsp_hit-from> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1359 <Hsp_hit-to>2392</Hsp_hit-to> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1360 <Hsp_query-frame>1</Hsp_query-frame> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1361 <Hsp_hit-frame>1</Hsp_hit-frame> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1362 <Hsp_identity>64</Hsp_identity> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1363 <Hsp_positive>64</Hsp_positive> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1364 <Hsp_gaps>0</Hsp_gaps> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1365 <Hsp_align-len>74</Hsp_align-len> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1366 <Hsp_qseq>GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTGTTCGCAGTCCAGAA</Hsp_qseq> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1367 <Hsp_hseq>GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTCTTCGCCGTCCAGAA</Hsp_hseq> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1368 <Hsp_midline>||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| | ||||| ||||||||</Hsp_midline> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1369 </Hsp> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1370 </Hit_hsps> |
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|
1371 </Hit> |
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|
1372 </Iteration_hits> |
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|
1373 <Iteration_stat> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1374 <Statistics> |
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|
1375 <Statistics_db-num>0</Statistics_db-num> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1376 <Statistics_db-len>0</Statistics_db-len> |
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|
1377 <Statistics_hsp-len>11</Statistics_hsp-len> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1378 <Statistics_eff-space>64449</Statistics_eff-space> |
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|
1379 <Statistics_kappa>0.41</Statistics_kappa> |
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|
1380 <Statistics_lambda>0.625</Statistics_lambda> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1381 <Statistics_entropy>0.78</Statistics_entropy> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1382 </Statistics> |
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|
1383 </Iteration_stat> |
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|
1384 </Iteration> |
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|
1385 </BlastOutput_iterations> |
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Jan Kanis <jan.code@jankanis.nl>
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|
1386 </BlastOutput> |
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|
1387 |