Mercurial > repos > jankanis > blast2html
annotate test-data/refresh_test_results.sh @ 128:82b8c9722996 default tip
Add links to github and bitbucket
author | Jan Kanis <jan.code@jankanis.nl> |
---|---|
date | Thu, 23 Jul 2015 12:24:40 +0200 |
parents | b3b5ee557170 |
children |
rev | line source |
---|---|
33
3bb5da68305e
add test update script, add url to github page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
1 #!/bin/sh |
3bb5da68305e
add test update script, add url to github page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
2 |
3bb5da68305e
add test update script, add url to github page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
3 # run this from the directory it exists in to update the test outputs |
3bb5da68305e
add test update script, add url to github page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
4 |
77 | 5 set -eu |
6 | |
105 | 7 for i in 1 2 3 4 |
8 do | |
9 "$@" ../blast2html.py -i "blast xml example$i.xml" -o "blast xml example$i.html" | |
10 done | |
98
e780606b7c25
test new command line parameters, fix small bug
Jan Kanis <jan.code@jankanis.nl>
parents:
77
diff
changeset
|
11 |
105 | 12 "$@" ../blast2html.py -i "blast xml example3.xml" -o "blast xml example3b.html" --genelink-template 'http://example.com/example-genebank?id={fullid}' |
13 "$@" ../blast2html.py -i "blast xml example4.xml" -o "blast xml example4b.html" --db-config-dir . | |
14 |