Mercurial > repos > jankanis > blast2html

comparison blast2html.xml @ 35:2b23b4a4d88e

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fix tool xml file name
author Jan Kanis <jan.code@jankanis.nl>
date Thu, 15 May 2014 18:15:04 +0200
parents tool_dependencies.xml@5d7a82f49485
children 0f015cb32b93
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34:5d7a82f49485 35:2b23b4a4d88e
1 <tool id="blast2html" name="blast2html" version="0.0.2">
2
3 <description>Convert BLAST XML to HTML</description>
4
5 <requirements>
6 <requirement type="python-module">jinja2</requirement>
7 <requirement type="python-module">lxml</requirement>
8 </requirements>
9
10 <command interpreter="python">blast2html.py -i "${input}" -o "${output}"</command>
11
12 <inputs>
13 <param format="blast" name="input" type="data" label="Source file"/>
14 </inputs>
15
16 <outputs>
17 <data format="html" name="output" />
18 </outputs>
19
20 <tests>
21 <test>
22 <param name="input" value="blast xml example1.xml"/>
23 <output name="out_file1" file="blast xml example1.html"/>
24 </test>
25 <test>
26 <param name="input" value="blast xml example2.xml"/>
27 <output name="out_file1" file="blast xml example2.html"/>
28 </test>
29 <test>
30 <param name="input" value="blast xml example3.xml"/>
31 <output name="out_file1" file="blast xml example3.html"/>
32 </test>
33 <test>
34 <param name="input" value="blast xml example4.xml"/>
35 <output name="out_file1" file="blast xml example4.html"/>
36 </test>
37 </tests>
38
39 <help>
40 This tool converts the default BLAST XML result into a HTML document
41 </help>
42
43 </tool>