Mercurial > repos > jankanis > blast2html

comparison test-data/blast xml example1.html @ 119:591dc9c24824

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
tentative fix for Rikilt issue 10: don't sort hits ourselves but use blastxml ordering
author Jan Kanis <jan.code@jankanis.nl>
date Thu, 31 Jul 2014 13:26:34 +0200
parents 7f3f8c10f44b
children
comparison
equal deleted inserted replaced
118:7f3f8c10f44b 119:591dc9c24824
755 style="background-color: transparent; width: 18.75%"></div> 755 style="background-color: transparent; width: 18.75%"></div>
756 </div> 756 </div>
757 </a> 757 </a>
758 758
759 <a class=matchresult 759 <a class=matchresult
760 href="#hit1-26"
761 onmouseover='document.getElementById("defline1").innerHTML="Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome"'
762 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
763 title="Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome">
764 <div class="matchrow graphicrow">
765 <div class="matchitem graphicitem"
766 style="background-color: transparent; width: 6.25%"></div>
767 <div class="matchitem graphicitem"
768 style="background-color: black; width: 87.5%"></div>
769 <div class="matchitem graphicitem"
770 style="background-color: transparent; width: 6.25%"></div>
771 </div>
772 </a>
773
774 <a class=matchresult
775 href="#hit1-27"
776 onmouseover='document.getElementById("defline1").innerHTML="Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome"'
777 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
778 title="Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome">
779 <div class="matchrow graphicrow">
780 <div class="matchitem graphicitem"
781 style="background-color: transparent; width: 43.75%"></div>
782 <div class="matchitem graphicitem"
783 style="background-color: black; width: 56.25%"></div>
784 </div>
785 </a>
786
787 <a class=matchresult
788 href="#hit1-28"
789 onmouseover='document.getElementById("defline1").innerHTML="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex"'
790 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
791 title="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex">
792 <div class="matchrow graphicrow">
793 <div class="matchitem graphicitem"
794 style="background-color: transparent; width: 18.75%"></div>
795 <div class="matchitem graphicitem"
796 style="background-color: black; width: 81.25%"></div>
797 </div>
798 </a>
799
800 <a class=matchresult
801 href="#hit1-29"
802 onmouseover='document.getElementById("defline1").innerHTML="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex"'
803 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
804 title="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex">
805 <div class="matchrow graphicrow">
806 <div class="matchitem graphicitem"
807 style="background-color: transparent; width: 18.75%"></div>
808 <div class="matchitem graphicitem"
809 style="background-color: black; width: 81.25%"></div>
810 </div>
811 </a>
812
813 <a class=matchresult
760 href="#hit1-30" 814 href="#hit1-30"
761 onmouseover='document.getElementById("defline1").innerHTML="Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)"' 815 onmouseover='document.getElementById("defline1").innerHTML="Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)"'
762 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"' 816 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
763 title="Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)"> 817 title="Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)">
764 <div class="matchrow graphicrow"> 818 <div class="matchrow graphicrow">
765 <div class="matchitem graphicitem" 819 <div class="matchitem graphicitem"
766 style="background-color: black; width: 81.25%"></div> 820 style="background-color: black; width: 81.25%"></div>
767 <div class="matchitem graphicitem" 821 <div class="matchitem graphicitem"
768 style="background-color: transparent; width: 18.75%"></div> 822 style="background-color: transparent; width: 18.75%"></div>
823 </div>
824 </a>
825
826 <a class=matchresult
827 href="#hit1-31"
828 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins"'
829 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
830 title="Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins">
831 <div class="matchrow graphicrow">
832 <div class="matchitem graphicitem"
833 style="background-color: transparent; width: 18.75%"></div>
834 <div class="matchitem graphicitem"
835 style="background-color: black; width: 75%"></div>
836 <div class="matchitem graphicitem"
837 style="background-color: transparent; width: 6.25%"></div>
838 </div>
839 </a>
840
841 <a class=matchresult
842 href="#hit1-32"
843 onmouseover='document.getElementById("defline1").innerHTML="Chain 5, Structure Of The H. Sapiens 60s Rrna"'
844 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
845 title="Chain 5, Structure Of The H. Sapiens 60s Rrna">
846 <div class="matchrow graphicrow">
847 <div class="matchitem graphicitem"
848 style="background-color: black; width: 100%"></div>
849 </div>
850 </a>
851
852 <a class=matchresult
853 href="#hit1-33"
854 onmouseover='document.getElementById("defline1").innerHTML="Chain 5, Structure Of The D. Melanogaster 60s Rrna"'
855 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
856 title="Chain 5, Structure Of The D. Melanogaster 60s Rrna">
857 <div class="matchrow graphicrow">
858 <div class="matchitem graphicitem"
859 style="background-color: black; width: 100%"></div>
860 </div>
861 </a>
862
863 <a class=matchresult
864 href="#hit1-34"
865 onmouseover='document.getElementById("defline1").innerHTML="Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome"'
866 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
867 title="Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome">
868 <div class="matchrow graphicrow">
869 <div class="matchitem graphicitem"
870 style="background-color: transparent; width: 18.75%"></div>
871 <div class="matchitem graphicitem"
872 style="background-color: black; width: 81.25%"></div>
769 </div> 873 </div>
770 </a> 874 </a>
771 875
772 <a class=matchresult 876 <a class=matchresult
773 href="#hit1-35" 877 href="#hit1-35"
777 <div class="matchrow graphicrow"> 881 <div class="matchrow graphicrow">
778 <div class="matchitem graphicitem" 882 <div class="matchitem graphicitem"
779 style="background-color: black; width: 81.25%"></div> 883 style="background-color: black; width: 81.25%"></div>
780 <div class="matchitem graphicitem" 884 <div class="matchitem graphicitem"
781 style="background-color: transparent; width: 18.75%"></div> 885 style="background-color: transparent; width: 18.75%"></div>
782 </div>
783 </a>
784
785 <a class=matchresult
786 href="#hit1-26"
787 onmouseover='document.getElementById("defline1").innerHTML="Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome"'
788 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
789 title="Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome">
790 <div class="matchrow graphicrow">
791 <div class="matchitem graphicitem"
792 style="background-color: transparent; width: 6.25%"></div>
793 <div class="matchitem graphicitem"
794 style="background-color: black; width: 87.5%"></div>
795 <div class="matchitem graphicitem"
796 style="background-color: transparent; width: 6.25%"></div>
797 </div>
798 </a>
799
800 <a class=matchresult
801 href="#hit1-27"
802 onmouseover='document.getElementById("defline1").innerHTML="Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome"'
803 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
804 title="Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome">
805 <div class="matchrow graphicrow">
806 <div class="matchitem graphicitem"
807 style="background-color: transparent; width: 43.75%"></div>
808 <div class="matchitem graphicitem"
809 style="background-color: black; width: 56.25%"></div>
810 </div>
811 </a>
812
813 <a class=matchresult
814 href="#hit1-28"
815 onmouseover='document.getElementById("defline1").innerHTML="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex"'
816 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
817 title="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex">
818 <div class="matchrow graphicrow">
819 <div class="matchitem graphicitem"
820 style="background-color: transparent; width: 18.75%"></div>
821 <div class="matchitem graphicitem"
822 style="background-color: black; width: 81.25%"></div>
823 </div>
824 </a>
825
826 <a class=matchresult
827 href="#hit1-29"
828 onmouseover='document.getElementById("defline1").innerHTML="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex"'
829 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
830 title="Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex">
831 <div class="matchrow graphicrow">
832 <div class="matchitem graphicitem"
833 style="background-color: transparent; width: 18.75%"></div>
834 <div class="matchitem graphicitem"
835 style="background-color: black; width: 81.25%"></div>
836 </div>
837 </a>
838
839 <a class=matchresult
840 href="#hit1-31"
841 onmouseover='document.getElementById("defline1").innerHTML="Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins"'
842 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
843 title="Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins">
844 <div class="matchrow graphicrow">
845 <div class="matchitem graphicitem"
846 style="background-color: transparent; width: 18.75%"></div>
847 <div class="matchitem graphicitem"
848 style="background-color: black; width: 75%"></div>
849 <div class="matchitem graphicitem"
850 style="background-color: transparent; width: 6.25%"></div>
851 </div>
852 </a>
853
854 <a class=matchresult
855 href="#hit1-32"
856 onmouseover='document.getElementById("defline1").innerHTML="Chain 5, Structure Of The H. Sapiens 60s Rrna"'
857 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
858 title="Chain 5, Structure Of The H. Sapiens 60s Rrna">
859 <div class="matchrow graphicrow">
860 <div class="matchitem graphicitem"
861 style="background-color: black; width: 100%"></div>
862 </div>
863 </a>
864
865 <a class=matchresult
866 href="#hit1-33"
867 onmouseover='document.getElementById("defline1").innerHTML="Chain 5, Structure Of The D. Melanogaster 60s Rrna"'
868 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
869 title="Chain 5, Structure Of The D. Melanogaster 60s Rrna">
870 <div class="matchrow graphicrow">
871 <div class="matchitem graphicitem"
872 style="background-color: black; width: 100%"></div>
873 </div>
874 </a>
875
876 <a class=matchresult
877 href="#hit1-34"
878 onmouseover='document.getElementById("defline1").innerHTML="Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome"'
879 onmouseout='document.getElementById("defline1").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
880 title="Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome">
881 <div class="matchrow graphicrow">
882 <div class="matchitem graphicitem"
883 style="background-color: transparent; width: 18.75%"></div>
884 <div class="matchitem graphicitem"
885 style="background-color: black; width: 81.25%"></div>
886 </div> 886 </div>
887 </a> 887 </a>
888 888
889 <a class=matchresult 889 <a class=matchresult
890 href="#hit1-36" 890 href="#hit1-36"
2181 <td>0.04882</td> 2181 <td>0.04882</td>
2182 <td>100%</td> 2182 <td>100%</td>
2183 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1C2W_B?report=genbank&amp;log$=nuclalign">1C2W_B</a></td> 2183 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/1C2W_B?report=genbank&amp;log$=nuclalign">1C2W_B</a></td>
2184 </tr> 2184 </tr>
2185 <tr> 2185 <tr>
2186 <td><div><a href="#hit1-30"
2187 title="Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)"
2188 id="description1-30">
2189 Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)
2190 </a></div></td>
2191 <td>18.3</td>
2192 <td>36.7</td>
2193 <td>81%</td>
2194 <td>11.9</td>
2195 <td>92%</td>
2196 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J44_1?report=genbank&amp;log$=nuclalign">3J44_1</a></td>
2197 </tr>
2198 <tr>
2199 <td><div><a href="#hit1-35"
2200 title="Chain 1, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Rna)"
2201 id="description1-35">
2202 Chain 1, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Rna)
2203 </a></div></td>
2204 <td>18.3</td>
2205 <td>36.7</td>
2206 <td>81%</td>
2207 <td>11.9</td>
2208 <td>92%</td>
2209 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J2L_1?report=genbank&amp;log$=nuclalign">3J2L_1</a></td>
2210 </tr>
2211 <tr>
2212 <td><div><a href="#hit1-26" 2186 <td><div><a href="#hit1-26"
2213 title="Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome" 2187 title="Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome"
2214 id="description1-26"> 2188 id="description1-26">
2215 Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome 2189 Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome
2216 </a></div></td> 2190 </a></div></td>
2259 <td>11.9</td> 2233 <td>11.9</td>
2260 <td>100%</td> 2234 <td>100%</td>
2261 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYW_5?report=genbank&amp;log$=nuclalign">4BYW_5</a></td> 2235 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYW_5?report=genbank&amp;log$=nuclalign">4BYW_5</a></td>
2262 </tr> 2236 </tr>
2263 <tr> 2237 <tr>
2238 <td><div><a href="#hit1-30"
2239 title="Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)"
2240 id="description1-30">
2241 Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)
2242 </a></div></td>
2243 <td>18.3</td>
2244 <td>36.7</td>
2245 <td>81%</td>
2246 <td>11.9</td>
2247 <td>92%</td>
2248 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J44_1?report=genbank&amp;log$=nuclalign">3J44_1</a></td>
2249 </tr>
2250 <tr>
2264 <td><div><a href="#hit1-31" 2251 <td><div><a href="#hit1-31"
2265 title="Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins" 2252 title="Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins"
2266 id="description1-31"> 2253 id="description1-31">
2267 Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins 2254 Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins
2268 </a></div></td> 2255 </a></div></td>
2309 <td>32.7</td> 2296 <td>32.7</td>
2310 <td>81%</td> 2297 <td>81%</td>
2311 <td>11.9</td> 2298 <td>11.9</td>
2312 <td>100%</td> 2299 <td>100%</td>
2313 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3ZEX_B?report=genbank&amp;log$=nuclalign">3ZEX_B</a></td> 2300 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3ZEX_B?report=genbank&amp;log$=nuclalign">3ZEX_B</a></td>
2301 </tr>
2302 <tr>
2303 <td><div><a href="#hit1-35"
2304 title="Chain 1, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Rna)"
2305 id="description1-35">
2306 Chain 1, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Rna)
2307 </a></div></td>
2308 <td>18.3</td>
2309 <td>36.7</td>
2310 <td>81%</td>
2311 <td>11.9</td>
2312 <td>92%</td>
2313 <td><a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J2L_1?report=genbank&amp;log$=nuclalign">3J2L_1</a></td>
2314 </tr> 2314 </tr>
2315 <tr> 2315 <tr>
2316 <td><div><a href="#hit1-36" 2316 <td><div><a href="#hit1-36"
2317 title="Chain 0, Crystal Structure Of Enhanced Macrolide Bound To 50s Ribosomal Subunit" 2317 title="Chain 0, Crystal Structure Of Enhanced Macrolide Bound To 50s Ribosomal Subunit"
2318 id="description1-36"> 2318 id="description1-36">
6264 Subject 839 TCGTGAA 845</pre> 6264 Subject 839 TCGTGAA 845</pre>
6265 </div> 6265 </div>
6266 6266
6267 </div> 6267 </div>
6268 6268
6269 <div class=alignment id=hit1-26>
6270
6271 <div class=linkheader>
6272 <div class=right><a href="#description1-26">Descriptions</a></div>
6273 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J62_AA?report=genbank&amp;log$=nuclalign">Gene Bank</a>
6274 </div>
6275
6276 <div class=title>
6277 <p class=hittitle>Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome</p>
6278 <p class=titleinfo>
6279 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J62_AA?report=genbank&amp;log$=nuclalign">gi|582044940|pdb|3J62|AA</a>
6280 <span class=b>Length:</span> 3391
6281 <span class=b>Number of Matches:</span> 5
6282 </p>
6283 </div>
6284
6285
6286 <div class=hotspot id=hotspot1-26-1>
6287 <p class=range>
6288 <span class=range>Range 1: 2961 to 2969</span>
6289 </p>
6290
6291 <table class=hotspotstable>
6292 <tr>
6293 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6294 </tr>
6295 <tr>
6296 <td>18.3341 bits (9)</td>
6297 <td>11.9013</td>
6298 <td>9/9 (100%)</td>
6299 <td>0/9 (0%)</td>
6300 <td>Plus/Plus</td>
6301 </tr>
6302 </table>
6303
6304 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12
6305 |||||||||
6306 Subject 2961 CCGTCGTGA 2969</pre>
6307 </div>
6308 <div class=hotspot id=hotspot1-26-2>
6309 <p class=range>
6310 <span class=range>Range 2: 177 to 170</span>
6311 </p>
6312
6313 <table class=hotspotstable>
6314 <tr>
6315 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6316 </tr>
6317 <tr>
6318 <td>16.3517 bits (8)</td>
6319 <td>47.0266</td>
6320 <td>8/8 (100%)</td>
6321 <td>0/8 (0%)</td>
6322 <td>Plus/Minus</td>
6323 </tr>
6324 </table>
6325
6326 <pre class=alignmentgraphic>Query 2 GTCCGTCG 9
6327 ||||||||
6328 Subject 177 GTCCGTCG 170</pre>
6329 </div>
6330 <div class=hotspot id=hotspot1-26-3>
6331 <p class=range>
6332 <span class=range>Range 3: 553 to 559</span>
6333 </p>
6334
6335 <table class=hotspotstable>
6336 <tr>
6337 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6338 </tr>
6339 <tr>
6340 <td>14.3694 bits (7)</td>
6341 <td>185.82</td>
6342 <td>7/7 (100%)</td>
6343 <td>0/7 (0%)</td>
6344 <td>Plus/Plus</td>
6345 </tr>
6346 </table>
6347
6348 <pre class=alignmentgraphic>Query 4 CCGTCGT 10
6349 |||||||
6350 Subject 553 CCGTCGT 559</pre>
6351 </div>
6352 <div class=hotspot id=hotspot1-26-4>
6353 <p class=range>
6354 <span class=range>Range 4: 2048 to 2042</span>
6355 </p>
6356
6357 <table class=hotspotstable>
6358 <tr>
6359 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6360 </tr>
6361 <tr>
6362 <td>14.3694 bits (7)</td>
6363 <td>185.82</td>
6364 <td>7/7 (100%)</td>
6365 <td>0/7 (0%)</td>
6366 <td>Plus/Minus</td>
6367 </tr>
6368 </table>
6369
6370 <pre class=alignmentgraphic>Query 2 GTCCGTC 8
6371 |||||||
6372 Subject 2048 GTCCGTC 2042</pre>
6373 </div>
6374 <div class=hotspot id=hotspot1-26-5>
6375 <p class=range>
6376 <span class=range>Range 5: 2211 to 2217</span>
6377 </p>
6378
6379 <table class=hotspotstable>
6380 <tr>
6381 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6382 </tr>
6383 <tr>
6384 <td>14.3694 bits (7)</td>
6385 <td>185.82</td>
6386 <td>7/7 (100%)</td>
6387 <td>0/7 (0%)</td>
6388 <td>Plus/Plus</td>
6389 </tr>
6390 </table>
6391
6392 <pre class=alignmentgraphic>Query 9 GTGAAGA 15
6393 |||||||
6394 Subject 2211 GTGAAGA 2217</pre>
6395 </div>
6396
6397 </div>
6398
6399 <div class=alignment id=hit1-27>
6400
6401 <div class=linkheader>
6402 <div class=right><a href="#description1-27">Descriptions</a></div>
6403 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4CE4_A?report=genbank&amp;log$=nuclalign">Gene Bank</a>
6404 </div>
6405
6406 <div class=title>
6407 <p class=hittitle>Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome</p>
6408 <p class=titleinfo>
6409 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4CE4_A?report=genbank&amp;log$=nuclalign">gi|567755268|pdb|4CE4|A</a>
6410 <span class=b>Length:</span> 1570
6411 <span class=b>Number of Matches:</span> 1
6412 </p>
6413 </div>
6414
6415
6416 <div class=hotspot id=hotspot1-27-1>
6417 <p class=range>
6418 <span class=range>Range 1: 1020 to 1028</span>
6419 </p>
6420
6421 <table class=hotspotstable>
6422 <tr>
6423 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6424 </tr>
6425 <tr>
6426 <td>18.3341 bits (9)</td>
6427 <td>11.9013</td>
6428 <td>9/9 (100%)</td>
6429 <td>0/9 (0%)</td>
6430 <td>Plus/Plus</td>
6431 </tr>
6432 </table>
6433
6434 <pre class=alignmentgraphic>Query 8 CGTGAAGAG 16
6435 |||||||||
6436 Subject 1020 CGTGAAGAG 1028</pre>
6437 </div>
6438
6439 </div>
6440
6441 <div class=alignment id=hit1-28>
6442
6443 <div class=linkheader>
6444 <div class=right><a href="#description1-28">Descriptions</a></div>
6445 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYP_5?report=genbank&amp;log$=nuclalign">Gene Bank</a>
6446 </div>
6447
6448 <div class=title>
6449 <p class=hittitle>Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex</p>
6450 <p class=titleinfo>
6451 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYP_5?report=genbank&amp;log$=nuclalign">gi|558704783|pdb|4BYP|5</a>
6452 <span class=b>Length:</span> 3396
6453 <span class=b>Number of Matches:</span> 5
6454 </p>
6455 </div>
6456
6457
6458 <div class=hotspot id=hotspot1-28-1>
6459 <p class=range>
6460 <span class=range>Range 1: 2959 to 2967</span>
6461 </p>
6462
6463 <table class=hotspotstable>
6464 <tr>
6465 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6466 </tr>
6467 <tr>
6468 <td>18.3341 bits (9)</td>
6469 <td>11.9013</td>
6470 <td>9/9 (100%)</td>
6471 <td>0/9 (0%)</td>
6472 <td>Plus/Plus</td>
6473 </tr>
6474 </table>
6475
6476 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12
6477 |||||||||
6478 Subject 2959 CCGTCGTGA 2967</pre>
6479 </div>
6480 <div class=hotspot id=hotspot1-28-2>
6481 <p class=range>
6482 <span class=range>Range 2: 1634 to 1627</span>
6483 </p>
6484
6485 <table class=hotspotstable>
6486 <tr>
6487 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6488 </tr>
6489 <tr>
6490 <td>16.3517 bits (8)</td>
6491 <td>47.0266</td>
6492 <td>8/8 (100%)</td>
6493 <td>0/8 (0%)</td>
6494 <td>Plus/Minus</td>
6495 </tr>
6496 </table>
6497
6498 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15
6499 ||||||||
6500 Subject 1634 CGTGAAGA 1627</pre>
6501 </div>
6502 <div class=hotspot id=hotspot1-28-3>
6503 <p class=range>
6504 <span class=range>Range 3: 2435 to 2442</span>
6505 </p>
6506
6507 <table class=hotspotstable>
6508 <tr>
6509 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6510 </tr>
6511 <tr>
6512 <td>16.3517 bits (8)</td>
6513 <td>47.0266</td>
6514 <td>8/8 (100%)</td>
6515 <td>0/8 (0%)</td>
6516 <td>Plus/Plus</td>
6517 </tr>
6518 </table>
6519
6520 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16
6521 ||||||||
6522 Subject 2435 GTGAAGAG 2442</pre>
6523 </div>
6524 <div class=hotspot id=hotspot1-28-4>
6525 <p class=range>
6526 <span class=range>Range 4: 1100 to 1106</span>
6527 </p>
6528
6529 <table class=hotspotstable>
6530 <tr>
6531 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6532 </tr>
6533 <tr>
6534 <td>14.3694 bits (7)</td>
6535 <td>185.82</td>
6536 <td>7/7 (100%)</td>
6537 <td>0/7 (0%)</td>
6538 <td>Plus/Plus</td>
6539 </tr>
6540 </table>
6541
6542 <pre class=alignmentgraphic>Query 10 TGAAGAG 16
6543 |||||||
6544 Subject 1100 TGAAGAG 1106</pre>
6545 </div>
6546 <div class=hotspot id=hotspot1-28-5>
6547 <p class=range>
6548 <span class=range>Range 5: 2216 to 2222</span>
6549 </p>
6550
6551 <table class=hotspotstable>
6552 <tr>
6553 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6554 </tr>
6555 <tr>
6556 <td>14.3694 bits (7)</td>
6557 <td>185.82</td>
6558 <td>7/7 (100%)</td>
6559 <td>0/7 (0%)</td>
6560 <td>Plus/Plus</td>
6561 </tr>
6562 </table>
6563
6564 <pre class=alignmentgraphic>Query 9 GTGAAGA 15
6565 |||||||
6566 Subject 2216 GTGAAGA 2222</pre>
6567 </div>
6568
6569 </div>
6570
6571 <div class=alignment id=hit1-29>
6572
6573 <div class=linkheader>
6574 <div class=right><a href="#description1-29">Descriptions</a></div>
6575 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYW_5?report=genbank&amp;log$=nuclalign">Gene Bank</a>
6576 </div>
6577
6578 <div class=title>
6579 <p class=hittitle>Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex</p>
6580 <p class=titleinfo>
6581 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYW_5?report=genbank&amp;log$=nuclalign">gi|558704825|pdb|4BYW|5</a>
6582 <span class=b>Length:</span> 3396
6583 <span class=b>Number of Matches:</span> 5
6584 </p>
6585 </div>
6586
6587
6588 <div class=hotspot id=hotspot1-29-1>
6589 <p class=range>
6590 <span class=range>Range 1: 2959 to 2967</span>
6591 </p>
6592
6593 <table class=hotspotstable>
6594 <tr>
6595 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6596 </tr>
6597 <tr>
6598 <td>18.3341 bits (9)</td>
6599 <td>11.9013</td>
6600 <td>9/9 (100%)</td>
6601 <td>0/9 (0%)</td>
6602 <td>Plus/Plus</td>
6603 </tr>
6604 </table>
6605
6606 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12
6607 |||||||||
6608 Subject 2959 CCGTCGTGA 2967</pre>
6609 </div>
6610 <div class=hotspot id=hotspot1-29-2>
6611 <p class=range>
6612 <span class=range>Range 2: 1634 to 1627</span>
6613 </p>
6614
6615 <table class=hotspotstable>
6616 <tr>
6617 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6618 </tr>
6619 <tr>
6620 <td>16.3517 bits (8)</td>
6621 <td>47.0266</td>
6622 <td>8/8 (100%)</td>
6623 <td>0/8 (0%)</td>
6624 <td>Plus/Minus</td>
6625 </tr>
6626 </table>
6627
6628 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15
6629 ||||||||
6630 Subject 1634 CGTGAAGA 1627</pre>
6631 </div>
6632 <div class=hotspot id=hotspot1-29-3>
6633 <p class=range>
6634 <span class=range>Range 3: 2435 to 2442</span>
6635 </p>
6636
6637 <table class=hotspotstable>
6638 <tr>
6639 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6640 </tr>
6641 <tr>
6642 <td>16.3517 bits (8)</td>
6643 <td>47.0266</td>
6644 <td>8/8 (100%)</td>
6645 <td>0/8 (0%)</td>
6646 <td>Plus/Plus</td>
6647 </tr>
6648 </table>
6649
6650 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16
6651 ||||||||
6652 Subject 2435 GTGAAGAG 2442</pre>
6653 </div>
6654 <div class=hotspot id=hotspot1-29-4>
6655 <p class=range>
6656 <span class=range>Range 4: 1100 to 1106</span>
6657 </p>
6658
6659 <table class=hotspotstable>
6660 <tr>
6661 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6662 </tr>
6663 <tr>
6664 <td>14.3694 bits (7)</td>
6665 <td>185.82</td>
6666 <td>7/7 (100%)</td>
6667 <td>0/7 (0%)</td>
6668 <td>Plus/Plus</td>
6669 </tr>
6670 </table>
6671
6672 <pre class=alignmentgraphic>Query 10 TGAAGAG 16
6673 |||||||
6674 Subject 1100 TGAAGAG 1106</pre>
6675 </div>
6676 <div class=hotspot id=hotspot1-29-5>
6677 <p class=range>
6678 <span class=range>Range 5: 2216 to 2222</span>
6679 </p>
6680
6681 <table class=hotspotstable>
6682 <tr>
6683 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6684 </tr>
6685 <tr>
6686 <td>14.3694 bits (7)</td>
6687 <td>185.82</td>
6688 <td>7/7 (100%)</td>
6689 <td>0/7 (0%)</td>
6690 <td>Plus/Plus</td>
6691 </tr>
6692 </table>
6693
6694 <pre class=alignmentgraphic>Query 9 GTGAAGA 15
6695 |||||||
6696 Subject 2216 GTGAAGA 2222</pre>
6697 </div>
6698
6699 </div>
6700
6269 <div class=alignment id=hit1-30> 6701 <div class=alignment id=hit1-30>
6270 6702
6271 <div class=linkheader> 6703 <div class=linkheader>
6272 <div class=right><a href="#description1-30">Descriptions</a></div> 6704 <div class=right><a href="#description1-30">Descriptions</a></div>
6273 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J44_1?report=genbank&amp;log$=nuclalign">Gene Bank</a> 6705 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J44_1?report=genbank&amp;log$=nuclalign">Gene Bank</a>
6328 Subject 2705 CCGTCGTGA 2713</pre> 6760 Subject 2705 CCGTCGTGA 2713</pre>
6329 </div> 6761 </div>
6330 6762
6331 </div> 6763 </div>
6332 6764
6765 <div class=alignment id=hit1-31>
6766
6767 <div class=linkheader>
6768 <div class=right><a href="#description1-31">Descriptions</a></div>
6769 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4HUB_0?report=genbank&amp;log$=nuclalign">Gene Bank</a>
6770 </div>
6771
6772 <div class=title>
6773 <p class=hittitle>Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins</p>
6774 <p class=titleinfo>
6775 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4HUB_0?report=genbank&amp;log$=nuclalign">gi|508123724|pdb|4HUB|0</a>
6776 <span class=b>Length:</span> 2910
6777 <span class=b>Number of Matches:</span> 3
6778 </p>
6779 </div>
6780
6781
6782 <div class=hotspot id=hotspot1-31-1>
6783 <p class=range>
6784 <span class=range>Range 1: 298 to 290</span>
6785 </p>
6786
6787 <table class=hotspotstable>
6788 <tr>
6789 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6790 </tr>
6791 <tr>
6792 <td>18.3341 bits (9)</td>
6793 <td>11.9013</td>
6794 <td>9/9 (100%)</td>
6795 <td>0/9 (0%)</td>
6796 <td>Plus/Minus</td>
6797 </tr>
6798 </table>
6799
6800 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15
6801 |||||||||
6802 Subject 298 TCGTGAAGA 290</pre>
6803 </div>
6804 <div class=hotspot id=hotspot1-31-2>
6805 <p class=range>
6806 <span class=range>Range 2: 2618 to 2626</span>
6807 </p>
6808
6809 <table class=hotspotstable>
6810 <tr>
6811 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6812 </tr>
6813 <tr>
6814 <td>18.3341 bits (9)</td>
6815 <td>11.9013</td>
6816 <td>9/9 (100%)</td>
6817 <td>0/9 (0%)</td>
6818 <td>Plus/Plus</td>
6819 </tr>
6820 </table>
6821
6822 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12
6823 |||||||||
6824 Subject 2618 CCGTCGTGA 2626</pre>
6825 </div>
6826 <div class=hotspot id=hotspot1-31-3>
6827 <p class=range>
6828 <span class=range>Range 3: 2599 to 2605</span>
6829 </p>
6830
6831 <table class=hotspotstable>
6832 <tr>
6833 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6834 </tr>
6835 <tr>
6836 <td>14.3694 bits (7)</td>
6837 <td>185.82</td>
6838 <td>7/7 (100%)</td>
6839 <td>0/7 (0%)</td>
6840 <td>Plus/Plus</td>
6841 </tr>
6842 </table>
6843
6844 <pre class=alignmentgraphic>Query 6 GTCGTGA 12
6845 |||||||
6846 Subject 2599 GTCGTGA 2605</pre>
6847 </div>
6848
6849 </div>
6850
6851 <div class=alignment id=hit1-32>
6852
6853 <div class=linkheader>
6854 <div class=right><a href="#description1-32">Descriptions</a></div>
6855 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3F_5?report=genbank&amp;log$=nuclalign">Gene Bank</a>
6856 </div>
6857
6858 <div class=title>
6859 <p class=hittitle>Chain 5, Structure Of The H. Sapiens 60s Rrna</p>
6860 <p class=titleinfo>
6861 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3F_5?report=genbank&amp;log$=nuclalign">gi|485601478|pdb|3J3F|5</a>
6862 <span class=b>Length:</span> 5070
6863 <span class=b>Number of Matches:</span> 8
6864 </p>
6865 </div>
6866
6867
6868 <div class=hotspot id=hotspot1-32-1>
6869 <p class=range>
6870 <span class=range>Range 1: 4536 to 4544</span>
6871 </p>
6872
6873 <table class=hotspotstable>
6874 <tr>
6875 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6876 </tr>
6877 <tr>
6878 <td>18.3341 bits (9)</td>
6879 <td>11.9013</td>
6880 <td>9/9 (100%)</td>
6881 <td>0/9 (0%)</td>
6882 <td>Plus/Plus</td>
6883 </tr>
6884 </table>
6885
6886 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12
6887 |||||||||
6888 Subject 4536 CCGTCGTGA 4544</pre>
6889 </div>
6890 <div class=hotspot id=hotspot1-32-2>
6891 <p class=range>
6892 <span class=range>Range 2: 765 to 772</span>
6893 </p>
6894
6895 <table class=hotspotstable>
6896 <tr>
6897 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6898 </tr>
6899 <tr>
6900 <td>16.3517 bits (8)</td>
6901 <td>47.0266</td>
6902 <td>8/8 (100%)</td>
6903 <td>0/8 (0%)</td>
6904 <td>Plus/Plus</td>
6905 </tr>
6906 </table>
6907
6908 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8
6909 ||||||||
6910 Subject 765 CGTCCGTC 772</pre>
6911 </div>
6912 <div class=hotspot id=hotspot1-32-3>
6913 <p class=range>
6914 <span class=range>Range 3: 769 to 776</span>
6915 </p>
6916
6917 <table class=hotspotstable>
6918 <tr>
6919 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6920 </tr>
6921 <tr>
6922 <td>16.3517 bits (8)</td>
6923 <td>47.0266</td>
6924 <td>8/8 (100%)</td>
6925 <td>0/8 (0%)</td>
6926 <td>Plus/Plus</td>
6927 </tr>
6928 </table>
6929
6930 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8
6931 ||||||||
6932 Subject 769 CGTCCGTC 776</pre>
6933 </div>
6934 <div class=hotspot id=hotspot1-32-4>
6935 <p class=range>
6936 <span class=range>Range 4: 773 to 780</span>
6937 </p>
6938
6939 <table class=hotspotstable>
6940 <tr>
6941 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6942 </tr>
6943 <tr>
6944 <td>16.3517 bits (8)</td>
6945 <td>47.0266</td>
6946 <td>8/8 (100%)</td>
6947 <td>0/8 (0%)</td>
6948 <td>Plus/Plus</td>
6949 </tr>
6950 </table>
6951
6952 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8
6953 ||||||||
6954 Subject 773 CGTCCGTC 780</pre>
6955 </div>
6956 <div class=hotspot id=hotspot1-32-5>
6957 <p class=range>
6958 <span class=range>Range 5: 777 to 784</span>
6959 </p>
6960
6961 <table class=hotspotstable>
6962 <tr>
6963 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6964 </tr>
6965 <tr>
6966 <td>16.3517 bits (8)</td>
6967 <td>47.0266</td>
6968 <td>8/8 (100%)</td>
6969 <td>0/8 (0%)</td>
6970 <td>Plus/Plus</td>
6971 </tr>
6972 </table>
6973
6974 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8
6975 ||||||||
6976 Subject 777 CGTCCGTC 784</pre>
6977 </div>
6978 <div class=hotspot id=hotspot1-32-6>
6979 <p class=range>
6980 <span class=range>Range 6: 3939 to 3946</span>
6981 </p>
6982
6983 <table class=hotspotstable>
6984 <tr>
6985 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6986 </tr>
6987 <tr>
6988 <td>16.3517 bits (8)</td>
6989 <td>47.0266</td>
6990 <td>8/8 (100%)</td>
6991 <td>0/8 (0%)</td>
6992 <td>Plus/Plus</td>
6993 </tr>
6994 </table>
6995
6996 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16
6997 ||||||||
6998 Subject 3939 GTGAAGAG 3946</pre>
6999 </div>
7000 <div class=hotspot id=hotspot1-32-7>
7001 <p class=range>
7002 <span class=range>Range 7: 393 to 399</span>
7003 </p>
7004
7005 <table class=hotspotstable>
7006 <tr>
7007 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7008 </tr>
7009 <tr>
7010 <td>14.3694 bits (7)</td>
7011 <td>185.82</td>
7012 <td>7/7 (100%)</td>
7013 <td>0/7 (0%)</td>
7014 <td>Plus/Plus</td>
7015 </tr>
7016 </table>
7017
7018 <pre class=alignmentgraphic>Query 10 TGAAGAG 16
7019 |||||||
7020 Subject 393 TGAAGAG 399</pre>
7021 </div>
7022 <div class=hotspot id=hotspot1-32-8>
7023 <p class=range>
7024 <span class=range>Range 8: 3720 to 3726</span>
7025 </p>
7026
7027 <table class=hotspotstable>
7028 <tr>
7029 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7030 </tr>
7031 <tr>
7032 <td>14.3694 bits (7)</td>
7033 <td>185.82</td>
7034 <td>7/7 (100%)</td>
7035 <td>0/7 (0%)</td>
7036 <td>Plus/Plus</td>
7037 </tr>
7038 </table>
7039
7040 <pre class=alignmentgraphic>Query 9 GTGAAGA 15
7041 |||||||
7042 Subject 3720 GTGAAGA 3726</pre>
7043 </div>
7044
7045 </div>
7046
7047 <div class=alignment id=hit1-33>
7048
7049 <div class=linkheader>
7050 <div class=right><a href="#description1-33">Descriptions</a></div>
7051 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3E_5?report=genbank&amp;log$=nuclalign">Gene Bank</a>
7052 </div>
7053
7054 <div class=title>
7055 <p class=hittitle>Chain 5, Structure Of The D. Melanogaster 60s Rrna</p>
7056 <p class=titleinfo>
7057 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3E_5?report=genbank&amp;log$=nuclalign">gi|485601474|pdb|3J3E|5</a>
7058 <span class=b>Length:</span> 3970
7059 <span class=b>Number of Matches:</span> 4
7060 </p>
7061 </div>
7062
7063
7064 <div class=hotspot id=hotspot1-33-1>
7065 <p class=range>
7066 <span class=range>Range 1: 3490 to 3498</span>
7067 </p>
7068
7069 <table class=hotspotstable>
7070 <tr>
7071 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7072 </tr>
7073 <tr>
7074 <td>18.3341 bits (9)</td>
7075 <td>11.9013</td>
7076 <td>9/9 (100%)</td>
7077 <td>0/9 (0%)</td>
7078 <td>Plus/Plus</td>
7079 </tr>
7080 </table>
7081
7082 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12
7083 |||||||||
7084 Subject 3490 CCGTCGTGA 3498</pre>
7085 </div>
7086 <div class=hotspot id=hotspot1-33-2>
7087 <p class=range>
7088 <span class=range>Range 2: 2177 to 2184</span>
7089 </p>
7090
7091 <table class=hotspotstable>
7092 <tr>
7093 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7094 </tr>
7095 <tr>
7096 <td>16.3517 bits (8)</td>
7097 <td>47.0266</td>
7098 <td>8/8 (100%)</td>
7099 <td>0/8 (0%)</td>
7100 <td>Plus/Plus</td>
7101 </tr>
7102 </table>
7103
7104 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16
7105 ||||||||
7106 Subject 2177 GTGAAGAG 2184</pre>
7107 </div>
7108 <div class=hotspot id=hotspot1-33-3>
7109 <p class=range>
7110 <span class=range>Range 3: 2594 to 2600</span>
7111 </p>
7112
7113 <table class=hotspotstable>
7114 <tr>
7115 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7116 </tr>
7117 <tr>
7118 <td>14.3694 bits (7)</td>
7119 <td>185.82</td>
7120 <td>7/7 (100%)</td>
7121 <td>0/7 (0%)</td>
7122 <td>Plus/Plus</td>
7123 </tr>
7124 </table>
7125
7126 <pre class=alignmentgraphic>Query 9 GTGAAGA 15
7127 |||||||
7128 Subject 2594 GTGAAGA 2600</pre>
7129 </div>
7130 <div class=hotspot id=hotspot1-33-4>
7131 <p class=range>
7132 <span class=range>Range 4: 3627 to 3633</span>
7133 </p>
7134
7135 <table class=hotspotstable>
7136 <tr>
7137 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7138 </tr>
7139 <tr>
7140 <td>14.3694 bits (7)</td>
7141 <td>185.82</td>
7142 <td>7/7 (100%)</td>
7143 <td>0/7 (0%)</td>
7144 <td>Plus/Plus</td>
7145 </tr>
7146 </table>
7147
7148 <pre class=alignmentgraphic>Query 1 CGTCCGT 7
7149 |||||||
7150 Subject 3627 CGTCCGT 3633</pre>
7151 </div>
7152
7153 </div>
7154
7155 <div class=alignment id=hit1-34>
7156
7157 <div class=linkheader>
7158 <div class=right><a href="#description1-34">Descriptions</a></div>
7159 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3ZEX_B?report=genbank&amp;log$=nuclalign">Gene Bank</a>
7160 </div>
7161
7162 <div class=title>
7163 <p class=hittitle>Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome</p>
7164 <p class=titleinfo>
7165 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3ZEX_B?report=genbank&amp;log$=nuclalign">gi|449802187|pdb|3ZEX|B</a>
7166 <span class=b>Length:</span> 1465
7167 <span class=b>Number of Matches:</span> 2
7168 </p>
7169 </div>
7170
7171
7172 <div class=hotspot id=hotspot1-34-1>
7173 <p class=range>
7174 <span class=range>Range 1: 1334 to 1342</span>
7175 </p>
7176
7177 <table class=hotspotstable>
7178 <tr>
7179 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7180 </tr>
7181 <tr>
7182 <td>18.3341 bits (9)</td>
7183 <td>11.9013</td>
7184 <td>9/9 (100%)</td>
7185 <td>0/9 (0%)</td>
7186 <td>Plus/Plus</td>
7187 </tr>
7188 </table>
7189
7190 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12
7191 |||||||||
7192 Subject 1334 CCGTCGTGA 1342</pre>
7193 </div>
7194 <div class=hotspot id=hotspot1-34-2>
7195 <p class=range>
7196 <span class=range>Range 2: 705 to 711</span>
7197 </p>
7198
7199 <table class=hotspotstable>
7200 <tr>
7201 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7202 </tr>
7203 <tr>
7204 <td>14.3694 bits (7)</td>
7205 <td>185.82</td>
7206 <td>7/7 (100%)</td>
7207 <td>0/7 (0%)</td>
7208 <td>Plus/Plus</td>
7209 </tr>
7210 </table>
7211
7212 <pre class=alignmentgraphic>Query 10 TGAAGAG 16
7213 |||||||
7214 Subject 705 TGAAGAG 711</pre>
7215 </div>
7216
7217 </div>
7218
6333 <div class=alignment id=hit1-35> 7219 <div class=alignment id=hit1-35>
6334 7220
6335 <div class=linkheader> 7221 <div class=linkheader>
6336 <div class=right><a href="#description1-35">Descriptions</a></div> 7222 <div class=right><a href="#description1-35">Descriptions</a></div>
6337 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J2L_1?report=genbank&amp;log$=nuclalign">Gene Bank</a> 7223 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J2L_1?report=genbank&amp;log$=nuclalign">Gene Bank</a>
6392 Subject 2705 CCGTCGTGA 2713</pre> 7278 Subject 2705 CCGTCGTGA 2713</pre>
6393 </div> 7279 </div>
6394 7280
6395 </div> 7281 </div>
6396 7282
6397 <div class=alignment id=hit1-26>
6398
6399 <div class=linkheader>
6400 <div class=right><a href="#description1-26">Descriptions</a></div>
6401 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J62_AA?report=genbank&amp;log$=nuclalign">Gene Bank</a>
6402 </div>
6403
6404 <div class=title>
6405 <p class=hittitle>Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome</p>
6406 <p class=titleinfo>
6407 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J62_AA?report=genbank&amp;log$=nuclalign">gi|582044940|pdb|3J62|AA</a>
6408 <span class=b>Length:</span> 3391
6409 <span class=b>Number of Matches:</span> 5
6410 </p>
6411 </div>
6412
6413
6414 <div class=hotspot id=hotspot1-26-1>
6415 <p class=range>
6416 <span class=range>Range 1: 2961 to 2969</span>
6417 </p>
6418
6419 <table class=hotspotstable>
6420 <tr>
6421 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6422 </tr>
6423 <tr>
6424 <td>18.3341 bits (9)</td>
6425 <td>11.9013</td>
6426 <td>9/9 (100%)</td>
6427 <td>0/9 (0%)</td>
6428 <td>Plus/Plus</td>
6429 </tr>
6430 </table>
6431
6432 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12
6433 |||||||||
6434 Subject 2961 CCGTCGTGA 2969</pre>
6435 </div>
6436 <div class=hotspot id=hotspot1-26-2>
6437 <p class=range>
6438 <span class=range>Range 2: 177 to 170</span>
6439 </p>
6440
6441 <table class=hotspotstable>
6442 <tr>
6443 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6444 </tr>
6445 <tr>
6446 <td>16.3517 bits (8)</td>
6447 <td>47.0266</td>
6448 <td>8/8 (100%)</td>
6449 <td>0/8 (0%)</td>
6450 <td>Plus/Minus</td>
6451 </tr>
6452 </table>
6453
6454 <pre class=alignmentgraphic>Query 2 GTCCGTCG 9
6455 ||||||||
6456 Subject 177 GTCCGTCG 170</pre>
6457 </div>
6458 <div class=hotspot id=hotspot1-26-3>
6459 <p class=range>
6460 <span class=range>Range 3: 553 to 559</span>
6461 </p>
6462
6463 <table class=hotspotstable>
6464 <tr>
6465 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6466 </tr>
6467 <tr>
6468 <td>14.3694 bits (7)</td>
6469 <td>185.82</td>
6470 <td>7/7 (100%)</td>
6471 <td>0/7 (0%)</td>
6472 <td>Plus/Plus</td>
6473 </tr>
6474 </table>
6475
6476 <pre class=alignmentgraphic>Query 4 CCGTCGT 10
6477 |||||||
6478 Subject 553 CCGTCGT 559</pre>
6479 </div>
6480 <div class=hotspot id=hotspot1-26-4>
6481 <p class=range>
6482 <span class=range>Range 4: 2048 to 2042</span>
6483 </p>
6484
6485 <table class=hotspotstable>
6486 <tr>
6487 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6488 </tr>
6489 <tr>
6490 <td>14.3694 bits (7)</td>
6491 <td>185.82</td>
6492 <td>7/7 (100%)</td>
6493 <td>0/7 (0%)</td>
6494 <td>Plus/Minus</td>
6495 </tr>
6496 </table>
6497
6498 <pre class=alignmentgraphic>Query 2 GTCCGTC 8
6499 |||||||
6500 Subject 2048 GTCCGTC 2042</pre>
6501 </div>
6502 <div class=hotspot id=hotspot1-26-5>
6503 <p class=range>
6504 <span class=range>Range 5: 2211 to 2217</span>
6505 </p>
6506
6507 <table class=hotspotstable>
6508 <tr>
6509 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6510 </tr>
6511 <tr>
6512 <td>14.3694 bits (7)</td>
6513 <td>185.82</td>
6514 <td>7/7 (100%)</td>
6515 <td>0/7 (0%)</td>
6516 <td>Plus/Plus</td>
6517 </tr>
6518 </table>
6519
6520 <pre class=alignmentgraphic>Query 9 GTGAAGA 15
6521 |||||||
6522 Subject 2211 GTGAAGA 2217</pre>
6523 </div>
6524
6525 </div>
6526
6527 <div class=alignment id=hit1-27>
6528
6529 <div class=linkheader>
6530 <div class=right><a href="#description1-27">Descriptions</a></div>
6531 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4CE4_A?report=genbank&amp;log$=nuclalign">Gene Bank</a>
6532 </div>
6533
6534 <div class=title>
6535 <p class=hittitle>Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome</p>
6536 <p class=titleinfo>
6537 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4CE4_A?report=genbank&amp;log$=nuclalign">gi|567755268|pdb|4CE4|A</a>
6538 <span class=b>Length:</span> 1570
6539 <span class=b>Number of Matches:</span> 1
6540 </p>
6541 </div>
6542
6543
6544 <div class=hotspot id=hotspot1-27-1>
6545 <p class=range>
6546 <span class=range>Range 1: 1020 to 1028</span>
6547 </p>
6548
6549 <table class=hotspotstable>
6550 <tr>
6551 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6552 </tr>
6553 <tr>
6554 <td>18.3341 bits (9)</td>
6555 <td>11.9013</td>
6556 <td>9/9 (100%)</td>
6557 <td>0/9 (0%)</td>
6558 <td>Plus/Plus</td>
6559 </tr>
6560 </table>
6561
6562 <pre class=alignmentgraphic>Query 8 CGTGAAGAG 16
6563 |||||||||
6564 Subject 1020 CGTGAAGAG 1028</pre>
6565 </div>
6566
6567 </div>
6568
6569 <div class=alignment id=hit1-28>
6570
6571 <div class=linkheader>
6572 <div class=right><a href="#description1-28">Descriptions</a></div>
6573 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYP_5?report=genbank&amp;log$=nuclalign">Gene Bank</a>
6574 </div>
6575
6576 <div class=title>
6577 <p class=hittitle>Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex</p>
6578 <p class=titleinfo>
6579 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYP_5?report=genbank&amp;log$=nuclalign">gi|558704783|pdb|4BYP|5</a>
6580 <span class=b>Length:</span> 3396
6581 <span class=b>Number of Matches:</span> 5
6582 </p>
6583 </div>
6584
6585
6586 <div class=hotspot id=hotspot1-28-1>
6587 <p class=range>
6588 <span class=range>Range 1: 2959 to 2967</span>
6589 </p>
6590
6591 <table class=hotspotstable>
6592 <tr>
6593 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6594 </tr>
6595 <tr>
6596 <td>18.3341 bits (9)</td>
6597 <td>11.9013</td>
6598 <td>9/9 (100%)</td>
6599 <td>0/9 (0%)</td>
6600 <td>Plus/Plus</td>
6601 </tr>
6602 </table>
6603
6604 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12
6605 |||||||||
6606 Subject 2959 CCGTCGTGA 2967</pre>
6607 </div>
6608 <div class=hotspot id=hotspot1-28-2>
6609 <p class=range>
6610 <span class=range>Range 2: 1634 to 1627</span>
6611 </p>
6612
6613 <table class=hotspotstable>
6614 <tr>
6615 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6616 </tr>
6617 <tr>
6618 <td>16.3517 bits (8)</td>
6619 <td>47.0266</td>
6620 <td>8/8 (100%)</td>
6621 <td>0/8 (0%)</td>
6622 <td>Plus/Minus</td>
6623 </tr>
6624 </table>
6625
6626 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15
6627 ||||||||
6628 Subject 1634 CGTGAAGA 1627</pre>
6629 </div>
6630 <div class=hotspot id=hotspot1-28-3>
6631 <p class=range>
6632 <span class=range>Range 3: 2435 to 2442</span>
6633 </p>
6634
6635 <table class=hotspotstable>
6636 <tr>
6637 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6638 </tr>
6639 <tr>
6640 <td>16.3517 bits (8)</td>
6641 <td>47.0266</td>
6642 <td>8/8 (100%)</td>
6643 <td>0/8 (0%)</td>
6644 <td>Plus/Plus</td>
6645 </tr>
6646 </table>
6647
6648 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16
6649 ||||||||
6650 Subject 2435 GTGAAGAG 2442</pre>
6651 </div>
6652 <div class=hotspot id=hotspot1-28-4>
6653 <p class=range>
6654 <span class=range>Range 4: 1100 to 1106</span>
6655 </p>
6656
6657 <table class=hotspotstable>
6658 <tr>
6659 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6660 </tr>
6661 <tr>
6662 <td>14.3694 bits (7)</td>
6663 <td>185.82</td>
6664 <td>7/7 (100%)</td>
6665 <td>0/7 (0%)</td>
6666 <td>Plus/Plus</td>
6667 </tr>
6668 </table>
6669
6670 <pre class=alignmentgraphic>Query 10 TGAAGAG 16
6671 |||||||
6672 Subject 1100 TGAAGAG 1106</pre>
6673 </div>
6674 <div class=hotspot id=hotspot1-28-5>
6675 <p class=range>
6676 <span class=range>Range 5: 2216 to 2222</span>
6677 </p>
6678
6679 <table class=hotspotstable>
6680 <tr>
6681 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6682 </tr>
6683 <tr>
6684 <td>14.3694 bits (7)</td>
6685 <td>185.82</td>
6686 <td>7/7 (100%)</td>
6687 <td>0/7 (0%)</td>
6688 <td>Plus/Plus</td>
6689 </tr>
6690 </table>
6691
6692 <pre class=alignmentgraphic>Query 9 GTGAAGA 15
6693 |||||||
6694 Subject 2216 GTGAAGA 2222</pre>
6695 </div>
6696
6697 </div>
6698
6699 <div class=alignment id=hit1-29>
6700
6701 <div class=linkheader>
6702 <div class=right><a href="#description1-29">Descriptions</a></div>
6703 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYW_5?report=genbank&amp;log$=nuclalign">Gene Bank</a>
6704 </div>
6705
6706 <div class=title>
6707 <p class=hittitle>Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex</p>
6708 <p class=titleinfo>
6709 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4BYW_5?report=genbank&amp;log$=nuclalign">gi|558704825|pdb|4BYW|5</a>
6710 <span class=b>Length:</span> 3396
6711 <span class=b>Number of Matches:</span> 5
6712 </p>
6713 </div>
6714
6715
6716 <div class=hotspot id=hotspot1-29-1>
6717 <p class=range>
6718 <span class=range>Range 1: 2959 to 2967</span>
6719 </p>
6720
6721 <table class=hotspotstable>
6722 <tr>
6723 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6724 </tr>
6725 <tr>
6726 <td>18.3341 bits (9)</td>
6727 <td>11.9013</td>
6728 <td>9/9 (100%)</td>
6729 <td>0/9 (0%)</td>
6730 <td>Plus/Plus</td>
6731 </tr>
6732 </table>
6733
6734 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12
6735 |||||||||
6736 Subject 2959 CCGTCGTGA 2967</pre>
6737 </div>
6738 <div class=hotspot id=hotspot1-29-2>
6739 <p class=range>
6740 <span class=range>Range 2: 1634 to 1627</span>
6741 </p>
6742
6743 <table class=hotspotstable>
6744 <tr>
6745 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6746 </tr>
6747 <tr>
6748 <td>16.3517 bits (8)</td>
6749 <td>47.0266</td>
6750 <td>8/8 (100%)</td>
6751 <td>0/8 (0%)</td>
6752 <td>Plus/Minus</td>
6753 </tr>
6754 </table>
6755
6756 <pre class=alignmentgraphic>Query 8 CGTGAAGA 15
6757 ||||||||
6758 Subject 1634 CGTGAAGA 1627</pre>
6759 </div>
6760 <div class=hotspot id=hotspot1-29-3>
6761 <p class=range>
6762 <span class=range>Range 3: 2435 to 2442</span>
6763 </p>
6764
6765 <table class=hotspotstable>
6766 <tr>
6767 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6768 </tr>
6769 <tr>
6770 <td>16.3517 bits (8)</td>
6771 <td>47.0266</td>
6772 <td>8/8 (100%)</td>
6773 <td>0/8 (0%)</td>
6774 <td>Plus/Plus</td>
6775 </tr>
6776 </table>
6777
6778 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16
6779 ||||||||
6780 Subject 2435 GTGAAGAG 2442</pre>
6781 </div>
6782 <div class=hotspot id=hotspot1-29-4>
6783 <p class=range>
6784 <span class=range>Range 4: 1100 to 1106</span>
6785 </p>
6786
6787 <table class=hotspotstable>
6788 <tr>
6789 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6790 </tr>
6791 <tr>
6792 <td>14.3694 bits (7)</td>
6793 <td>185.82</td>
6794 <td>7/7 (100%)</td>
6795 <td>0/7 (0%)</td>
6796 <td>Plus/Plus</td>
6797 </tr>
6798 </table>
6799
6800 <pre class=alignmentgraphic>Query 10 TGAAGAG 16
6801 |||||||
6802 Subject 1100 TGAAGAG 1106</pre>
6803 </div>
6804 <div class=hotspot id=hotspot1-29-5>
6805 <p class=range>
6806 <span class=range>Range 5: 2216 to 2222</span>
6807 </p>
6808
6809 <table class=hotspotstable>
6810 <tr>
6811 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6812 </tr>
6813 <tr>
6814 <td>14.3694 bits (7)</td>
6815 <td>185.82</td>
6816 <td>7/7 (100%)</td>
6817 <td>0/7 (0%)</td>
6818 <td>Plus/Plus</td>
6819 </tr>
6820 </table>
6821
6822 <pre class=alignmentgraphic>Query 9 GTGAAGA 15
6823 |||||||
6824 Subject 2216 GTGAAGA 2222</pre>
6825 </div>
6826
6827 </div>
6828
6829 <div class=alignment id=hit1-31>
6830
6831 <div class=linkheader>
6832 <div class=right><a href="#description1-31">Descriptions</a></div>
6833 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4HUB_0?report=genbank&amp;log$=nuclalign">Gene Bank</a>
6834 </div>
6835
6836 <div class=title>
6837 <p class=hittitle>Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins</p>
6838 <p class=titleinfo>
6839 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/4HUB_0?report=genbank&amp;log$=nuclalign">gi|508123724|pdb|4HUB|0</a>
6840 <span class=b>Length:</span> 2910
6841 <span class=b>Number of Matches:</span> 3
6842 </p>
6843 </div>
6844
6845
6846 <div class=hotspot id=hotspot1-31-1>
6847 <p class=range>
6848 <span class=range>Range 1: 298 to 290</span>
6849 </p>
6850
6851 <table class=hotspotstable>
6852 <tr>
6853 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6854 </tr>
6855 <tr>
6856 <td>18.3341 bits (9)</td>
6857 <td>11.9013</td>
6858 <td>9/9 (100%)</td>
6859 <td>0/9 (0%)</td>
6860 <td>Plus/Minus</td>
6861 </tr>
6862 </table>
6863
6864 <pre class=alignmentgraphic>Query 7 TCGTGAAGA 15
6865 |||||||||
6866 Subject 298 TCGTGAAGA 290</pre>
6867 </div>
6868 <div class=hotspot id=hotspot1-31-2>
6869 <p class=range>
6870 <span class=range>Range 2: 2618 to 2626</span>
6871 </p>
6872
6873 <table class=hotspotstable>
6874 <tr>
6875 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6876 </tr>
6877 <tr>
6878 <td>18.3341 bits (9)</td>
6879 <td>11.9013</td>
6880 <td>9/9 (100%)</td>
6881 <td>0/9 (0%)</td>
6882 <td>Plus/Plus</td>
6883 </tr>
6884 </table>
6885
6886 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12
6887 |||||||||
6888 Subject 2618 CCGTCGTGA 2626</pre>
6889 </div>
6890 <div class=hotspot id=hotspot1-31-3>
6891 <p class=range>
6892 <span class=range>Range 3: 2599 to 2605</span>
6893 </p>
6894
6895 <table class=hotspotstable>
6896 <tr>
6897 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6898 </tr>
6899 <tr>
6900 <td>14.3694 bits (7)</td>
6901 <td>185.82</td>
6902 <td>7/7 (100%)</td>
6903 <td>0/7 (0%)</td>
6904 <td>Plus/Plus</td>
6905 </tr>
6906 </table>
6907
6908 <pre class=alignmentgraphic>Query 6 GTCGTGA 12
6909 |||||||
6910 Subject 2599 GTCGTGA 2605</pre>
6911 </div>
6912
6913 </div>
6914
6915 <div class=alignment id=hit1-32>
6916
6917 <div class=linkheader>
6918 <div class=right><a href="#description1-32">Descriptions</a></div>
6919 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3F_5?report=genbank&amp;log$=nuclalign">Gene Bank</a>
6920 </div>
6921
6922 <div class=title>
6923 <p class=hittitle>Chain 5, Structure Of The H. Sapiens 60s Rrna</p>
6924 <p class=titleinfo>
6925 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3F_5?report=genbank&amp;log$=nuclalign">gi|485601478|pdb|3J3F|5</a>
6926 <span class=b>Length:</span> 5070
6927 <span class=b>Number of Matches:</span> 8
6928 </p>
6929 </div>
6930
6931
6932 <div class=hotspot id=hotspot1-32-1>
6933 <p class=range>
6934 <span class=range>Range 1: 4536 to 4544</span>
6935 </p>
6936
6937 <table class=hotspotstable>
6938 <tr>
6939 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6940 </tr>
6941 <tr>
6942 <td>18.3341 bits (9)</td>
6943 <td>11.9013</td>
6944 <td>9/9 (100%)</td>
6945 <td>0/9 (0%)</td>
6946 <td>Plus/Plus</td>
6947 </tr>
6948 </table>
6949
6950 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12
6951 |||||||||
6952 Subject 4536 CCGTCGTGA 4544</pre>
6953 </div>
6954 <div class=hotspot id=hotspot1-32-2>
6955 <p class=range>
6956 <span class=range>Range 2: 765 to 772</span>
6957 </p>
6958
6959 <table class=hotspotstable>
6960 <tr>
6961 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6962 </tr>
6963 <tr>
6964 <td>16.3517 bits (8)</td>
6965 <td>47.0266</td>
6966 <td>8/8 (100%)</td>
6967 <td>0/8 (0%)</td>
6968 <td>Plus/Plus</td>
6969 </tr>
6970 </table>
6971
6972 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8
6973 ||||||||
6974 Subject 765 CGTCCGTC 772</pre>
6975 </div>
6976 <div class=hotspot id=hotspot1-32-3>
6977 <p class=range>
6978 <span class=range>Range 3: 769 to 776</span>
6979 </p>
6980
6981 <table class=hotspotstable>
6982 <tr>
6983 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
6984 </tr>
6985 <tr>
6986 <td>16.3517 bits (8)</td>
6987 <td>47.0266</td>
6988 <td>8/8 (100%)</td>
6989 <td>0/8 (0%)</td>
6990 <td>Plus/Plus</td>
6991 </tr>
6992 </table>
6993
6994 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8
6995 ||||||||
6996 Subject 769 CGTCCGTC 776</pre>
6997 </div>
6998 <div class=hotspot id=hotspot1-32-4>
6999 <p class=range>
7000 <span class=range>Range 4: 773 to 780</span>
7001 </p>
7002
7003 <table class=hotspotstable>
7004 <tr>
7005 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7006 </tr>
7007 <tr>
7008 <td>16.3517 bits (8)</td>
7009 <td>47.0266</td>
7010 <td>8/8 (100%)</td>
7011 <td>0/8 (0%)</td>
7012 <td>Plus/Plus</td>
7013 </tr>
7014 </table>
7015
7016 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8
7017 ||||||||
7018 Subject 773 CGTCCGTC 780</pre>
7019 </div>
7020 <div class=hotspot id=hotspot1-32-5>
7021 <p class=range>
7022 <span class=range>Range 5: 777 to 784</span>
7023 </p>
7024
7025 <table class=hotspotstable>
7026 <tr>
7027 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7028 </tr>
7029 <tr>
7030 <td>16.3517 bits (8)</td>
7031 <td>47.0266</td>
7032 <td>8/8 (100%)</td>
7033 <td>0/8 (0%)</td>
7034 <td>Plus/Plus</td>
7035 </tr>
7036 </table>
7037
7038 <pre class=alignmentgraphic>Query 1 CGTCCGTC 8
7039 ||||||||
7040 Subject 777 CGTCCGTC 784</pre>
7041 </div>
7042 <div class=hotspot id=hotspot1-32-6>
7043 <p class=range>
7044 <span class=range>Range 6: 3939 to 3946</span>
7045 </p>
7046
7047 <table class=hotspotstable>
7048 <tr>
7049 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7050 </tr>
7051 <tr>
7052 <td>16.3517 bits (8)</td>
7053 <td>47.0266</td>
7054 <td>8/8 (100%)</td>
7055 <td>0/8 (0%)</td>
7056 <td>Plus/Plus</td>
7057 </tr>
7058 </table>
7059
7060 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16
7061 ||||||||
7062 Subject 3939 GTGAAGAG 3946</pre>
7063 </div>
7064 <div class=hotspot id=hotspot1-32-7>
7065 <p class=range>
7066 <span class=range>Range 7: 393 to 399</span>
7067 </p>
7068
7069 <table class=hotspotstable>
7070 <tr>
7071 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7072 </tr>
7073 <tr>
7074 <td>14.3694 bits (7)</td>
7075 <td>185.82</td>
7076 <td>7/7 (100%)</td>
7077 <td>0/7 (0%)</td>
7078 <td>Plus/Plus</td>
7079 </tr>
7080 </table>
7081
7082 <pre class=alignmentgraphic>Query 10 TGAAGAG 16
7083 |||||||
7084 Subject 393 TGAAGAG 399</pre>
7085 </div>
7086 <div class=hotspot id=hotspot1-32-8>
7087 <p class=range>
7088 <span class=range>Range 8: 3720 to 3726</span>
7089 </p>
7090
7091 <table class=hotspotstable>
7092 <tr>
7093 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7094 </tr>
7095 <tr>
7096 <td>14.3694 bits (7)</td>
7097 <td>185.82</td>
7098 <td>7/7 (100%)</td>
7099 <td>0/7 (0%)</td>
7100 <td>Plus/Plus</td>
7101 </tr>
7102 </table>
7103
7104 <pre class=alignmentgraphic>Query 9 GTGAAGA 15
7105 |||||||
7106 Subject 3720 GTGAAGA 3726</pre>
7107 </div>
7108
7109 </div>
7110
7111 <div class=alignment id=hit1-33>
7112
7113 <div class=linkheader>
7114 <div class=right><a href="#description1-33">Descriptions</a></div>
7115 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3E_5?report=genbank&amp;log$=nuclalign">Gene Bank</a>
7116 </div>
7117
7118 <div class=title>
7119 <p class=hittitle>Chain 5, Structure Of The D. Melanogaster 60s Rrna</p>
7120 <p class=titleinfo>
7121 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3J3E_5?report=genbank&amp;log$=nuclalign">gi|485601474|pdb|3J3E|5</a>
7122 <span class=b>Length:</span> 3970
7123 <span class=b>Number of Matches:</span> 4
7124 </p>
7125 </div>
7126
7127
7128 <div class=hotspot id=hotspot1-33-1>
7129 <p class=range>
7130 <span class=range>Range 1: 3490 to 3498</span>
7131 </p>
7132
7133 <table class=hotspotstable>
7134 <tr>
7135 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7136 </tr>
7137 <tr>
7138 <td>18.3341 bits (9)</td>
7139 <td>11.9013</td>
7140 <td>9/9 (100%)</td>
7141 <td>0/9 (0%)</td>
7142 <td>Plus/Plus</td>
7143 </tr>
7144 </table>
7145
7146 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12
7147 |||||||||
7148 Subject 3490 CCGTCGTGA 3498</pre>
7149 </div>
7150 <div class=hotspot id=hotspot1-33-2>
7151 <p class=range>
7152 <span class=range>Range 2: 2177 to 2184</span>
7153 </p>
7154
7155 <table class=hotspotstable>
7156 <tr>
7157 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7158 </tr>
7159 <tr>
7160 <td>16.3517 bits (8)</td>
7161 <td>47.0266</td>
7162 <td>8/8 (100%)</td>
7163 <td>0/8 (0%)</td>
7164 <td>Plus/Plus</td>
7165 </tr>
7166 </table>
7167
7168 <pre class=alignmentgraphic>Query 9 GTGAAGAG 16
7169 ||||||||
7170 Subject 2177 GTGAAGAG 2184</pre>
7171 </div>
7172 <div class=hotspot id=hotspot1-33-3>
7173 <p class=range>
7174 <span class=range>Range 3: 2594 to 2600</span>
7175 </p>
7176
7177 <table class=hotspotstable>
7178 <tr>
7179 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7180 </tr>
7181 <tr>
7182 <td>14.3694 bits (7)</td>
7183 <td>185.82</td>
7184 <td>7/7 (100%)</td>
7185 <td>0/7 (0%)</td>
7186 <td>Plus/Plus</td>
7187 </tr>
7188 </table>
7189
7190 <pre class=alignmentgraphic>Query 9 GTGAAGA 15
7191 |||||||
7192 Subject 2594 GTGAAGA 2600</pre>
7193 </div>
7194 <div class=hotspot id=hotspot1-33-4>
7195 <p class=range>
7196 <span class=range>Range 4: 3627 to 3633</span>
7197 </p>
7198
7199 <table class=hotspotstable>
7200 <tr>
7201 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7202 </tr>
7203 <tr>
7204 <td>14.3694 bits (7)</td>
7205 <td>185.82</td>
7206 <td>7/7 (100%)</td>
7207 <td>0/7 (0%)</td>
7208 <td>Plus/Plus</td>
7209 </tr>
7210 </table>
7211
7212 <pre class=alignmentgraphic>Query 1 CGTCCGT 7
7213 |||||||
7214 Subject 3627 CGTCCGT 3633</pre>
7215 </div>
7216
7217 </div>
7218
7219 <div class=alignment id=hit1-34>
7220
7221 <div class=linkheader>
7222 <div class=right><a href="#description1-34">Descriptions</a></div>
7223 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3ZEX_B?report=genbank&amp;log$=nuclalign">Gene Bank</a>
7224 </div>
7225
7226 <div class=title>
7227 <p class=hittitle>Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome</p>
7228 <p class=titleinfo>
7229 <span class=b>Sequence ID:</span> <a target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3ZEX_B?report=genbank&amp;log$=nuclalign">gi|449802187|pdb|3ZEX|B</a>
7230 <span class=b>Length:</span> 1465
7231 <span class=b>Number of Matches:</span> 2
7232 </p>
7233 </div>
7234
7235
7236 <div class=hotspot id=hotspot1-34-1>
7237 <p class=range>
7238 <span class=range>Range 1: 1334 to 1342</span>
7239 </p>
7240
7241 <table class=hotspotstable>
7242 <tr>
7243 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7244 </tr>
7245 <tr>
7246 <td>18.3341 bits (9)</td>
7247 <td>11.9013</td>
7248 <td>9/9 (100%)</td>
7249 <td>0/9 (0%)</td>
7250 <td>Plus/Plus</td>
7251 </tr>
7252 </table>
7253
7254 <pre class=alignmentgraphic>Query 4 CCGTCGTGA 12
7255 |||||||||
7256 Subject 1334 CCGTCGTGA 1342</pre>
7257 </div>
7258 <div class=hotspot id=hotspot1-34-2>
7259 <p class=range>
7260 <span class=range>Range 2: 705 to 711</span>
7261 </p>
7262
7263 <table class=hotspotstable>
7264 <tr>
7265 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
7266 </tr>
7267 <tr>
7268 <td>14.3694 bits (7)</td>
7269 <td>185.82</td>
7270 <td>7/7 (100%)</td>
7271 <td>0/7 (0%)</td>
7272 <td>Plus/Plus</td>
7273 </tr>
7274 </table>
7275
7276 <pre class=alignmentgraphic>Query 10 TGAAGAG 16
7277 |||||||
7278 Subject 705 TGAAGAG 711</pre>
7279 </div>
7280
7281 </div>
7282
7283 <div class=alignment id=hit1-36> 7283 <div class=alignment id=hit1-36>
7284 7284
7285 <div class=linkheader> 7285 <div class=linkheader>
7286 <div class=right><a href="#description1-36">Descriptions</a></div> 7286 <div class=right><a href="#description1-36">Descriptions</a></div>
7287 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3OW2_0?report=genbank&amp;log$=nuclalign">Gene Bank</a> 7287 <a class="linkheader" target="_top" href="http://www.ncbi.nlm.nih.gov/nucleotide/3OW2_0?report=genbank&amp;log$=nuclalign">Gene Bank</a>