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comparison blast2html.xml @ 28:8a8c0c71b5d1

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add blast2html.xml config setting
author Jan Kanis <jan.code@jankanis.nl>
date Thu, 15 May 2014 16:46:30 +0200
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27:4e6ac737ba17 28:8a8c0c71b5d1
1 <tool id="blast2html" name="blast2html" version="0.0.1">
2
3 <description>Convert BLAST XML to HTML</description>
4
5 <requirements>
6 <requirement type="python-module">jinja2</requirement>
7 <requirement type="python-module">lxml</requirement>
8 </requirements>
9
10 <command interpreter="python">blast2html.py -i "${input}" -o "${output}"</command>
11
12 <inputs>
13 <param format="blast" name="input" type="data" label="Source file"/>
14 </inputs>
15
16 <outputs>
17 <data format="html" name="output" />
18 </outputs>
19
20 <tests>
21 <test>
22 <param name="input" value="blast-view_test1_in.xml"/>
23 <output name="out_file1" file="blast-view_test1_out.html"/>
24 </test>
25 <test>
26 <param name="input" value="blast-view_test2_in.xml"/>
27 <output name="out_file1" file="blast-view_test2_out.html"/>
28 </test>
29 </tests>
30
31 <help>
32 This tool converts the default BLAST XML result into a HTML document
33 </help>
34
35 </tool>