Mercurial > repos > jankanis > blast2html
comparison test-data/blast xml example3.xml @ 32:ce8f29efc0a1
fix tests
author | Jan Kanis <jan.code@jankanis.nl> |
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date | Thu, 15 May 2014 17:22:02 +0200 |
parents | test-data/Galaxy19-[blastn_EUginius_primers_probes.fasta_vs_EUginius_plasmid_insert.fasta_].blastxml@420d0508dcd6 |
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31:344cd76f6fd2 | 32:ce8f29efc0a1 |
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1 <?xml version="1.0"?> | |
2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> | |
3 <BlastOutput> | |
4 <BlastOutput_program>blastn</BlastOutput_program> | |
5 <BlastOutput_version>BLASTN 2.2.29+</BlastOutput_version> | |
6 <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference> | |
7 <BlastOutput_db></BlastOutput_db> | |
8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID> | |
9 <BlastOutput_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</BlastOutput_query-def> | |
10 <BlastOutput_query-len>20</BlastOutput_query-len> | |
11 <BlastOutput_param> | |
12 <Parameters> | |
13 <Parameters_expect>0.001</Parameters_expect> | |
14 <Parameters_sc-match>2</Parameters_sc-match> | |
15 <Parameters_sc-mismatch>-3</Parameters_sc-mismatch> | |
16 <Parameters_gap-open>5</Parameters_gap-open> | |
17 <Parameters_gap-extend>2</Parameters_gap-extend> | |
18 <Parameters_filter>L;m;</Parameters_filter> | |
19 </Parameters> | |
20 </BlastOutput_param> | |
21 <BlastOutput_iterations> | |
22 <Iteration> | |
23 <Iteration_iter-num>1</Iteration_iter-num> | |
24 <Iteration_query-ID>Query_1</Iteration_query-ID> | |
25 <Iteration_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
26 <Iteration_query-len>20</Iteration_query-len> | |
27 <Iteration_hits> | |
28 </Iteration_hits> | |
29 <Iteration_stat> | |
30 <Statistics> | |
31 <Statistics_db-num>0</Statistics_db-num> | |
32 <Statistics_db-len>0</Statistics_db-len> | |
33 <Statistics_hsp-len>8</Statistics_hsp-len> | |
34 <Statistics_eff-space>12312</Statistics_eff-space> | |
35 <Statistics_kappa>0.41</Statistics_kappa> | |
36 <Statistics_lambda>0.625</Statistics_lambda> | |
37 <Statistics_entropy>0.78</Statistics_entropy> | |
38 </Statistics> | |
39 </Iteration_stat> | |
40 <Iteration_message>No hits found</Iteration_message> | |
41 </Iteration> | |
42 <Iteration> | |
43 <Iteration_iter-num>2</Iteration_iter-num> | |
44 <Iteration_query-ID>Query_1</Iteration_query-ID> | |
45 <Iteration_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
46 <Iteration_query-len>20</Iteration_query-len> | |
47 <Iteration_hits> | |
48 </Iteration_hits> | |
49 <Iteration_stat> | |
50 <Statistics> | |
51 <Statistics_db-num>0</Statistics_db-num> | |
52 <Statistics_db-len>0</Statistics_db-len> | |
53 <Statistics_hsp-len>8</Statistics_hsp-len> | |
54 <Statistics_eff-space>12312</Statistics_eff-space> | |
55 <Statistics_kappa>0.41</Statistics_kappa> | |
56 <Statistics_lambda>0.625</Statistics_lambda> | |
57 <Statistics_entropy>0.78</Statistics_entropy> | |
58 </Statistics> | |
59 </Iteration_stat> | |
60 <Iteration_message>No hits found</Iteration_message> | |
61 </Iteration> | |
62 <Iteration> | |
63 <Iteration_iter-num>3</Iteration_iter-num> | |
64 <Iteration_query-ID>Query_1</Iteration_query-ID> | |
65 <Iteration_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
66 <Iteration_query-len>20</Iteration_query-len> | |
67 <Iteration_hits> | |
68 <Hit> | |
69 <Hit_num>1</Hit_num> | |
70 <Hit_id>Subject_3</Hit_id> | |
71 <Hit_def>DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000</Hit_def> | |
72 <Hit_accession>Subject_3</Hit_accession> | |
73 <Hit_len>323</Hit_len> | |
74 <Hit_hsps> | |
75 <Hsp> | |
76 <Hsp_num>1</Hsp_num> | |
77 <Hsp_bit-score>37.3537</Hsp_bit-score> | |
78 <Hsp_score>40</Hsp_score> | |
79 <Hsp_evalue>7.01052e-08</Hsp_evalue> | |
80 <Hsp_query-from>1</Hsp_query-from> | |
81 <Hsp_query-to>20</Hsp_query-to> | |
82 <Hsp_hit-from>200</Hsp_hit-from> | |
83 <Hsp_hit-to>219</Hsp_hit-to> | |
84 <Hsp_query-frame>1</Hsp_query-frame> | |
85 <Hsp_hit-frame>1</Hsp_hit-frame> | |
86 <Hsp_identity>20</Hsp_identity> | |
87 <Hsp_positive>20</Hsp_positive> | |
88 <Hsp_gaps>0</Hsp_gaps> | |
89 <Hsp_align-len>20</Hsp_align-len> | |
90 <Hsp_qseq>AGCGCGCAAACTAGGATAAA</Hsp_qseq> | |
91 <Hsp_hseq>AGCGCGCAAACTAGGATAAA</Hsp_hseq> | |
92 <Hsp_midline>||||||||||||||||||||</Hsp_midline> | |
93 </Hsp> | |
94 </Hit_hsps> | |
95 </Hit> | |
96 </Iteration_hits> | |
97 <Iteration_stat> | |
98 <Statistics> | |
99 <Statistics_db-num>0</Statistics_db-num> | |
100 <Statistics_db-len>0</Statistics_db-len> | |
101 <Statistics_hsp-len>8</Statistics_hsp-len> | |
102 <Statistics_eff-space>12312</Statistics_eff-space> | |
103 <Statistics_kappa>0.41</Statistics_kappa> | |
104 <Statistics_lambda>0.625</Statistics_lambda> | |
105 <Statistics_entropy>0.78</Statistics_entropy> | |
106 </Statistics> | |
107 </Iteration_stat> | |
108 </Iteration> | |
109 <Iteration> | |
110 <Iteration_iter-num>4</Iteration_iter-num> | |
111 <Iteration_query-ID>Query_1</Iteration_query-ID> | |
112 <Iteration_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
113 <Iteration_query-len>20</Iteration_query-len> | |
114 <Iteration_hits> | |
115 </Iteration_hits> | |
116 <Iteration_stat> | |
117 <Statistics> | |
118 <Statistics_db-num>0</Statistics_db-num> | |
119 <Statistics_db-len>0</Statistics_db-len> | |
120 <Statistics_hsp-len>8</Statistics_hsp-len> | |
121 <Statistics_eff-space>12312</Statistics_eff-space> | |
122 <Statistics_kappa>0.41</Statistics_kappa> | |
123 <Statistics_lambda>0.625</Statistics_lambda> | |
124 <Statistics_entropy>0.78</Statistics_entropy> | |
125 </Statistics> | |
126 </Iteration_stat> | |
127 <Iteration_message>No hits found</Iteration_message> | |
128 </Iteration> | |
129 <Iteration> | |
130 <Iteration_iter-num>5</Iteration_iter-num> | |
131 <Iteration_query-ID>Query_1</Iteration_query-ID> | |
132 <Iteration_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
133 <Iteration_query-len>20</Iteration_query-len> | |
134 <Iteration_hits> | |
135 </Iteration_hits> | |
136 <Iteration_stat> | |
137 <Statistics> | |
138 <Statistics_db-num>0</Statistics_db-num> | |
139 <Statistics_db-len>0</Statistics_db-len> | |
140 <Statistics_hsp-len>8</Statistics_hsp-len> | |
141 <Statistics_eff-space>12312</Statistics_eff-space> | |
142 <Statistics_kappa>0.41</Statistics_kappa> | |
143 <Statistics_lambda>0.625</Statistics_lambda> | |
144 <Statistics_entropy>0.78</Statistics_entropy> | |
145 </Statistics> | |
146 </Iteration_stat> | |
147 <Iteration_message>No hits found</Iteration_message> | |
148 </Iteration> | |
149 <Iteration> | |
150 <Iteration_iter-num>6</Iteration_iter-num> | |
151 <Iteration_query-ID>Query_1</Iteration_query-ID> | |
152 <Iteration_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
153 <Iteration_query-len>20</Iteration_query-len> | |
154 <Iteration_hits> | |
155 <Hit> | |
156 <Hit_num>1</Hit_num> | |
157 <Hit_id>Subject_6</Hit_id> | |
158 <Hit_def>AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000</Hit_def> | |
159 <Hit_accession>Subject_6</Hit_accession> | |
160 <Hit_len>2457</Hit_len> | |
161 <Hit_hsps> | |
162 <Hsp> | |
163 <Hsp_num>1</Hsp_num> | |
164 <Hsp_bit-score>37.3537</Hsp_bit-score> | |
165 <Hsp_score>40</Hsp_score> | |
166 <Hsp_evalue>7.01052e-08</Hsp_evalue> | |
167 <Hsp_query-from>1</Hsp_query-from> | |
168 <Hsp_query-to>20</Hsp_query-to> | |
169 <Hsp_hit-from>2119</Hsp_hit-from> | |
170 <Hsp_hit-to>2138</Hsp_hit-to> | |
171 <Hsp_query-frame>1</Hsp_query-frame> | |
172 <Hsp_hit-frame>1</Hsp_hit-frame> | |
173 <Hsp_identity>20</Hsp_identity> | |
174 <Hsp_positive>20</Hsp_positive> | |
175 <Hsp_gaps>0</Hsp_gaps> | |
176 <Hsp_align-len>20</Hsp_align-len> | |
177 <Hsp_qseq>AGCGCGCAAACTAGGATAAA</Hsp_qseq> | |
178 <Hsp_hseq>AGCGCGCAAACTAGGATAAA</Hsp_hseq> | |
179 <Hsp_midline>||||||||||||||||||||</Hsp_midline> | |
180 </Hsp> | |
181 </Hit_hsps> | |
182 </Hit> | |
183 </Iteration_hits> | |
184 <Iteration_stat> | |
185 <Statistics> | |
186 <Statistics_db-num>0</Statistics_db-num> | |
187 <Statistics_db-len>0</Statistics_db-len> | |
188 <Statistics_hsp-len>8</Statistics_hsp-len> | |
189 <Statistics_eff-space>12312</Statistics_eff-space> | |
190 <Statistics_kappa>0.41</Statistics_kappa> | |
191 <Statistics_lambda>0.625</Statistics_lambda> | |
192 <Statistics_entropy>0.78</Statistics_entropy> | |
193 </Statistics> | |
194 </Iteration_stat> | |
195 </Iteration> | |
196 <Iteration> | |
197 <Iteration_iter-num>7</Iteration_iter-num> | |
198 <Iteration_query-ID>Query_1</Iteration_query-ID> | |
199 <Iteration_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
200 <Iteration_query-len>20</Iteration_query-len> | |
201 <Iteration_hits> | |
202 </Iteration_hits> | |
203 <Iteration_stat> | |
204 <Statistics> | |
205 <Statistics_db-num>0</Statistics_db-num> | |
206 <Statistics_db-len>0</Statistics_db-len> | |
207 <Statistics_hsp-len>8</Statistics_hsp-len> | |
208 <Statistics_eff-space>12312</Statistics_eff-space> | |
209 <Statistics_kappa>0.41</Statistics_kappa> | |
210 <Statistics_lambda>0.625</Statistics_lambda> | |
211 <Statistics_entropy>0.78</Statistics_entropy> | |
212 </Statistics> | |
213 </Iteration_stat> | |
214 <Iteration_message>No hits found</Iteration_message> | |
215 </Iteration> | |
216 <Iteration> | |
217 <Iteration_iter-num>8</Iteration_iter-num> | |
218 <Iteration_query-ID>Query_1</Iteration_query-ID> | |
219 <Iteration_query-def>Forward_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
220 <Iteration_query-len>20</Iteration_query-len> | |
221 <Iteration_hits> | |
222 </Iteration_hits> | |
223 <Iteration_stat> | |
224 <Statistics> | |
225 <Statistics_db-num>0</Statistics_db-num> | |
226 <Statistics_db-len>0</Statistics_db-len> | |
227 <Statistics_hsp-len>8</Statistics_hsp-len> | |
228 <Statistics_eff-space>12312</Statistics_eff-space> | |
229 <Statistics_kappa>0.41</Statistics_kappa> | |
230 <Statistics_lambda>0.625</Statistics_lambda> | |
231 <Statistics_entropy>0.78</Statistics_entropy> | |
232 </Statistics> | |
233 </Iteration_stat> | |
234 <Iteration_message>No hits found</Iteration_message> | |
235 </Iteration> | |
236 <Iteration> | |
237 <Iteration_iter-num>9</Iteration_iter-num> | |
238 <Iteration_query-ID>Query_2</Iteration_query-ID> | |
239 <Iteration_query-def>Reverse_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
240 <Iteration_query-len>20</Iteration_query-len> | |
241 <Iteration_hits> | |
242 </Iteration_hits> | |
243 <Iteration_stat> | |
244 <Statistics> | |
245 <Statistics_db-num>0</Statistics_db-num> | |
246 <Statistics_db-len>0</Statistics_db-len> | |
247 <Statistics_hsp-len>8</Statistics_hsp-len> | |
248 <Statistics_eff-space>12312</Statistics_eff-space> | |
249 <Statistics_kappa>0.41</Statistics_kappa> | |
250 <Statistics_lambda>0.625</Statistics_lambda> | |
251 <Statistics_entropy>0.78</Statistics_entropy> | |
252 </Statistics> | |
253 </Iteration_stat> | |
254 <Iteration_message>No hits found</Iteration_message> | |
255 </Iteration> | |
256 <Iteration> | |
257 <Iteration_iter-num>10</Iteration_iter-num> | |
258 <Iteration_query-ID>Query_2</Iteration_query-ID> | |
259 <Iteration_query-def>Reverse_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
260 <Iteration_query-len>20</Iteration_query-len> | |
261 <Iteration_hits> | |
262 </Iteration_hits> | |
263 <Iteration_stat> | |
264 <Statistics> | |
265 <Statistics_db-num>0</Statistics_db-num> | |
266 <Statistics_db-len>0</Statistics_db-len> | |
267 <Statistics_hsp-len>8</Statistics_hsp-len> | |
268 <Statistics_eff-space>12312</Statistics_eff-space> | |
269 <Statistics_kappa>0.41</Statistics_kappa> | |
270 <Statistics_lambda>0.625</Statistics_lambda> | |
271 <Statistics_entropy>0.78</Statistics_entropy> | |
272 </Statistics> | |
273 </Iteration_stat> | |
274 <Iteration_message>No hits found</Iteration_message> | |
275 </Iteration> | |
276 <Iteration> | |
277 <Iteration_iter-num>11</Iteration_iter-num> | |
278 <Iteration_query-ID>Query_2</Iteration_query-ID> | |
279 <Iteration_query-def>Reverse_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
280 <Iteration_query-len>20</Iteration_query-len> | |
281 <Iteration_hits> | |
282 </Iteration_hits> | |
283 <Iteration_stat> | |
284 <Statistics> | |
285 <Statistics_db-num>0</Statistics_db-num> | |
286 <Statistics_db-len>0</Statistics_db-len> | |
287 <Statistics_hsp-len>8</Statistics_hsp-len> | |
288 <Statistics_eff-space>12312</Statistics_eff-space> | |
289 <Statistics_kappa>0.41</Statistics_kappa> | |
290 <Statistics_lambda>0.625</Statistics_lambda> | |
291 <Statistics_entropy>0.78</Statistics_entropy> | |
292 </Statistics> | |
293 </Iteration_stat> | |
294 <Iteration_message>No hits found</Iteration_message> | |
295 </Iteration> | |
296 <Iteration> | |
297 <Iteration_iter-num>12</Iteration_iter-num> | |
298 <Iteration_query-ID>Query_2</Iteration_query-ID> | |
299 <Iteration_query-def>Reverse_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
300 <Iteration_query-len>20</Iteration_query-len> | |
301 <Iteration_hits> | |
302 </Iteration_hits> | |
303 <Iteration_stat> | |
304 <Statistics> | |
305 <Statistics_db-num>0</Statistics_db-num> | |
306 <Statistics_db-len>0</Statistics_db-len> | |
307 <Statistics_hsp-len>8</Statistics_hsp-len> | |
308 <Statistics_eff-space>12312</Statistics_eff-space> | |
309 <Statistics_kappa>0.41</Statistics_kappa> | |
310 <Statistics_lambda>0.625</Statistics_lambda> | |
311 <Statistics_entropy>0.78</Statistics_entropy> | |
312 </Statistics> | |
313 </Iteration_stat> | |
314 <Iteration_message>No hits found</Iteration_message> | |
315 </Iteration> | |
316 <Iteration> | |
317 <Iteration_iter-num>13</Iteration_iter-num> | |
318 <Iteration_query-ID>Query_2</Iteration_query-ID> | |
319 <Iteration_query-def>Reverse_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
320 <Iteration_query-len>20</Iteration_query-len> | |
321 <Iteration_hits> | |
322 </Iteration_hits> | |
323 <Iteration_stat> | |
324 <Statistics> | |
325 <Statistics_db-num>0</Statistics_db-num> | |
326 <Statistics_db-len>0</Statistics_db-len> | |
327 <Statistics_hsp-len>8</Statistics_hsp-len> | |
328 <Statistics_eff-space>12312</Statistics_eff-space> | |
329 <Statistics_kappa>0.41</Statistics_kappa> | |
330 <Statistics_lambda>0.625</Statistics_lambda> | |
331 <Statistics_entropy>0.78</Statistics_entropy> | |
332 </Statistics> | |
333 </Iteration_stat> | |
334 <Iteration_message>No hits found</Iteration_message> | |
335 </Iteration> | |
336 <Iteration> | |
337 <Iteration_iter-num>14</Iteration_iter-num> | |
338 <Iteration_query-ID>Query_2</Iteration_query-ID> | |
339 <Iteration_query-def>Reverse_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
340 <Iteration_query-len>20</Iteration_query-len> | |
341 <Iteration_hits> | |
342 </Iteration_hits> | |
343 <Iteration_stat> | |
344 <Statistics> | |
345 <Statistics_db-num>0</Statistics_db-num> | |
346 <Statistics_db-len>0</Statistics_db-len> | |
347 <Statistics_hsp-len>8</Statistics_hsp-len> | |
348 <Statistics_eff-space>12312</Statistics_eff-space> | |
349 <Statistics_kappa>0.41</Statistics_kappa> | |
350 <Statistics_lambda>0.625</Statistics_lambda> | |
351 <Statistics_entropy>0.78</Statistics_entropy> | |
352 </Statistics> | |
353 </Iteration_stat> | |
354 <Iteration_message>No hits found</Iteration_message> | |
355 </Iteration> | |
356 <Iteration> | |
357 <Iteration_iter-num>15</Iteration_iter-num> | |
358 <Iteration_query-ID>Query_2</Iteration_query-ID> | |
359 <Iteration_query-def>Reverse_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
360 <Iteration_query-len>20</Iteration_query-len> | |
361 <Iteration_hits> | |
362 </Iteration_hits> | |
363 <Iteration_stat> | |
364 <Statistics> | |
365 <Statistics_db-num>0</Statistics_db-num> | |
366 <Statistics_db-len>0</Statistics_db-len> | |
367 <Statistics_hsp-len>8</Statistics_hsp-len> | |
368 <Statistics_eff-space>12312</Statistics_eff-space> | |
369 <Statistics_kappa>0.41</Statistics_kappa> | |
370 <Statistics_lambda>0.625</Statistics_lambda> | |
371 <Statistics_entropy>0.78</Statistics_entropy> | |
372 </Statistics> | |
373 </Iteration_stat> | |
374 <Iteration_message>No hits found</Iteration_message> | |
375 </Iteration> | |
376 <Iteration> | |
377 <Iteration_iter-num>16</Iteration_iter-num> | |
378 <Iteration_query-ID>Query_2</Iteration_query-ID> | |
379 <Iteration_query-def>Reverse_Primer|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
380 <Iteration_query-len>20</Iteration_query-len> | |
381 <Iteration_hits> | |
382 </Iteration_hits> | |
383 <Iteration_stat> | |
384 <Statistics> | |
385 <Statistics_db-num>0</Statistics_db-num> | |
386 <Statistics_db-len>0</Statistics_db-len> | |
387 <Statistics_hsp-len>8</Statistics_hsp-len> | |
388 <Statistics_eff-space>12312</Statistics_eff-space> | |
389 <Statistics_kappa>0.41</Statistics_kappa> | |
390 <Statistics_lambda>0.625</Statistics_lambda> | |
391 <Statistics_entropy>0.78</Statistics_entropy> | |
392 </Statistics> | |
393 </Iteration_stat> | |
394 <Iteration_message>No hits found</Iteration_message> | |
395 </Iteration> | |
396 <Iteration> | |
397 <Iteration_iter-num>17</Iteration_iter-num> | |
398 <Iteration_query-ID>Query_3</Iteration_query-ID> | |
399 <Iteration_query-def>Probe|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
400 <Iteration_query-len>20</Iteration_query-len> | |
401 <Iteration_hits> | |
402 </Iteration_hits> | |
403 <Iteration_stat> | |
404 <Statistics> | |
405 <Statistics_db-num>0</Statistics_db-num> | |
406 <Statistics_db-len>0</Statistics_db-len> | |
407 <Statistics_hsp-len>8</Statistics_hsp-len> | |
408 <Statistics_eff-space>12312</Statistics_eff-space> | |
409 <Statistics_kappa>0.41</Statistics_kappa> | |
410 <Statistics_lambda>0.625</Statistics_lambda> | |
411 <Statistics_entropy>0.78</Statistics_entropy> | |
412 </Statistics> | |
413 </Iteration_stat> | |
414 <Iteration_message>No hits found</Iteration_message> | |
415 </Iteration> | |
416 <Iteration> | |
417 <Iteration_iter-num>18</Iteration_iter-num> | |
418 <Iteration_query-ID>Query_3</Iteration_query-ID> | |
419 <Iteration_query-def>Probe|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
420 <Iteration_query-len>20</Iteration_query-len> | |
421 <Iteration_hits> | |
422 <Hit> | |
423 <Hit_num>1</Hit_num> | |
424 <Hit_id>Subject_2</Hit_id> | |
425 <Hit_def>AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3'UTR/plant_junction_region.|-9105899556052450000</Hit_def> | |
426 <Hit_accession>Subject_2</Hit_accession> | |
427 <Hit_len>1045</Hit_len> | |
428 <Hit_hsps> | |
429 <Hsp> | |
430 <Hsp_num>1</Hsp_num> | |
431 <Hsp_bit-score>31.9436</Hsp_bit-score> | |
432 <Hsp_score>34</Hsp_score> | |
433 <Hsp_evalue>2.98095e-06</Hsp_evalue> | |
434 <Hsp_query-from>4</Hsp_query-from> | |
435 <Hsp_query-to>20</Hsp_query-to> | |
436 <Hsp_hit-from>2</Hsp_hit-from> | |
437 <Hsp_hit-to>18</Hsp_hit-to> | |
438 <Hsp_query-frame>1</Hsp_query-frame> | |
439 <Hsp_hit-frame>1</Hsp_hit-frame> | |
440 <Hsp_identity>17</Hsp_identity> | |
441 <Hsp_positive>17</Hsp_positive> | |
442 <Hsp_gaps>0</Hsp_gaps> | |
443 <Hsp_align-len>17</Hsp_align-len> | |
444 <Hsp_qseq>GCGCGGTGTCATCTATG</Hsp_qseq> | |
445 <Hsp_hseq>GCGCGGTGTCATCTATG</Hsp_hseq> | |
446 <Hsp_midline>|||||||||||||||||</Hsp_midline> | |
447 </Hsp> | |
448 </Hit_hsps> | |
449 </Hit> | |
450 </Iteration_hits> | |
451 <Iteration_stat> | |
452 <Statistics> | |
453 <Statistics_db-num>0</Statistics_db-num> | |
454 <Statistics_db-len>0</Statistics_db-len> | |
455 <Statistics_hsp-len>8</Statistics_hsp-len> | |
456 <Statistics_eff-space>12312</Statistics_eff-space> | |
457 <Statistics_kappa>0.41</Statistics_kappa> | |
458 <Statistics_lambda>0.625</Statistics_lambda> | |
459 <Statistics_entropy>0.78</Statistics_entropy> | |
460 </Statistics> | |
461 </Iteration_stat> | |
462 </Iteration> | |
463 <Iteration> | |
464 <Iteration_iter-num>19</Iteration_iter-num> | |
465 <Iteration_query-ID>Query_3</Iteration_query-ID> | |
466 <Iteration_query-def>Probe|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
467 <Iteration_query-len>20</Iteration_query-len> | |
468 <Iteration_hits> | |
469 <Hit> | |
470 <Hit_num>1</Hit_num> | |
471 <Hit_id>Subject_3</Hit_id> | |
472 <Hit_def>DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000</Hit_def> | |
473 <Hit_accession>Subject_3</Hit_accession> | |
474 <Hit_len>323</Hit_len> | |
475 <Hit_hsps> | |
476 <Hsp> | |
477 <Hsp_num>1</Hsp_num> | |
478 <Hsp_bit-score>37.3537</Hsp_bit-score> | |
479 <Hsp_score>40</Hsp_score> | |
480 <Hsp_evalue>7.01052e-08</Hsp_evalue> | |
481 <Hsp_query-from>1</Hsp_query-from> | |
482 <Hsp_query-to>20</Hsp_query-to> | |
483 <Hsp_hit-from>224</Hsp_hit-from> | |
484 <Hsp_hit-to>243</Hsp_hit-to> | |
485 <Hsp_query-frame>1</Hsp_query-frame> | |
486 <Hsp_hit-frame>1</Hsp_hit-frame> | |
487 <Hsp_identity>20</Hsp_identity> | |
488 <Hsp_positive>20</Hsp_positive> | |
489 <Hsp_gaps>0</Hsp_gaps> | |
490 <Hsp_align-len>20</Hsp_align-len> | |
491 <Hsp_qseq>CGCGCGCGGTGTCATCTATG</Hsp_qseq> | |
492 <Hsp_hseq>CGCGCGCGGTGTCATCTATG</Hsp_hseq> | |
493 <Hsp_midline>||||||||||||||||||||</Hsp_midline> | |
494 </Hsp> | |
495 </Hit_hsps> | |
496 </Hit> | |
497 </Iteration_hits> | |
498 <Iteration_stat> | |
499 <Statistics> | |
500 <Statistics_db-num>0</Statistics_db-num> | |
501 <Statistics_db-len>0</Statistics_db-len> | |
502 <Statistics_hsp-len>8</Statistics_hsp-len> | |
503 <Statistics_eff-space>12312</Statistics_eff-space> | |
504 <Statistics_kappa>0.41</Statistics_kappa> | |
505 <Statistics_lambda>0.625</Statistics_lambda> | |
506 <Statistics_entropy>0.78</Statistics_entropy> | |
507 </Statistics> | |
508 </Iteration_stat> | |
509 </Iteration> | |
510 <Iteration> | |
511 <Iteration_iter-num>20</Iteration_iter-num> | |
512 <Iteration_query-ID>Query_3</Iteration_query-ID> | |
513 <Iteration_query-def>Probe|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
514 <Iteration_query-len>20</Iteration_query-len> | |
515 <Iteration_hits> | |
516 </Iteration_hits> | |
517 <Iteration_stat> | |
518 <Statistics> | |
519 <Statistics_db-num>0</Statistics_db-num> | |
520 <Statistics_db-len>0</Statistics_db-len> | |
521 <Statistics_hsp-len>8</Statistics_hsp-len> | |
522 <Statistics_eff-space>12312</Statistics_eff-space> | |
523 <Statistics_kappa>0.41</Statistics_kappa> | |
524 <Statistics_lambda>0.625</Statistics_lambda> | |
525 <Statistics_entropy>0.78</Statistics_entropy> | |
526 </Statistics> | |
527 </Iteration_stat> | |
528 <Iteration_message>No hits found</Iteration_message> | |
529 </Iteration> | |
530 <Iteration> | |
531 <Iteration_iter-num>21</Iteration_iter-num> | |
532 <Iteration_query-ID>Query_3</Iteration_query-ID> | |
533 <Iteration_query-def>Probe|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
534 <Iteration_query-len>20</Iteration_query-len> | |
535 <Iteration_hits> | |
536 </Iteration_hits> | |
537 <Iteration_stat> | |
538 <Statistics> | |
539 <Statistics_db-num>0</Statistics_db-num> | |
540 <Statistics_db-len>0</Statistics_db-len> | |
541 <Statistics_hsp-len>8</Statistics_hsp-len> | |
542 <Statistics_eff-space>12312</Statistics_eff-space> | |
543 <Statistics_kappa>0.41</Statistics_kappa> | |
544 <Statistics_lambda>0.625</Statistics_lambda> | |
545 <Statistics_entropy>0.78</Statistics_entropy> | |
546 </Statistics> | |
547 </Iteration_stat> | |
548 <Iteration_message>No hits found</Iteration_message> | |
549 </Iteration> | |
550 <Iteration> | |
551 <Iteration_iter-num>22</Iteration_iter-num> | |
552 <Iteration_query-ID>Query_3</Iteration_query-ID> | |
553 <Iteration_query-def>Probe|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
554 <Iteration_query-len>20</Iteration_query-len> | |
555 <Iteration_hits> | |
556 <Hit> | |
557 <Hit_num>1</Hit_num> | |
558 <Hit_id>Subject_6</Hit_id> | |
559 <Hit_def>AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000</Hit_def> | |
560 <Hit_accession>Subject_6</Hit_accession> | |
561 <Hit_len>2457</Hit_len> | |
562 <Hit_hsps> | |
563 <Hsp> | |
564 <Hsp_num>1</Hsp_num> | |
565 <Hsp_bit-score>37.3537</Hsp_bit-score> | |
566 <Hsp_score>40</Hsp_score> | |
567 <Hsp_evalue>7.01052e-08</Hsp_evalue> | |
568 <Hsp_query-from>1</Hsp_query-from> | |
569 <Hsp_query-to>20</Hsp_query-to> | |
570 <Hsp_hit-from>2143</Hsp_hit-from> | |
571 <Hsp_hit-to>2162</Hsp_hit-to> | |
572 <Hsp_query-frame>1</Hsp_query-frame> | |
573 <Hsp_hit-frame>1</Hsp_hit-frame> | |
574 <Hsp_identity>20</Hsp_identity> | |
575 <Hsp_positive>20</Hsp_positive> | |
576 <Hsp_gaps>0</Hsp_gaps> | |
577 <Hsp_align-len>20</Hsp_align-len> | |
578 <Hsp_qseq>CGCGCGCGGTGTCATCTATG</Hsp_qseq> | |
579 <Hsp_hseq>CGCGCGCGGTGTCATCTATG</Hsp_hseq> | |
580 <Hsp_midline>||||||||||||||||||||</Hsp_midline> | |
581 </Hsp> | |
582 </Hit_hsps> | |
583 </Hit> | |
584 </Iteration_hits> | |
585 <Iteration_stat> | |
586 <Statistics> | |
587 <Statistics_db-num>0</Statistics_db-num> | |
588 <Statistics_db-len>0</Statistics_db-len> | |
589 <Statistics_hsp-len>8</Statistics_hsp-len> | |
590 <Statistics_eff-space>12312</Statistics_eff-space> | |
591 <Statistics_kappa>0.41</Statistics_kappa> | |
592 <Statistics_lambda>0.625</Statistics_lambda> | |
593 <Statistics_entropy>0.78</Statistics_entropy> | |
594 </Statistics> | |
595 </Iteration_stat> | |
596 </Iteration> | |
597 <Iteration> | |
598 <Iteration_iter-num>23</Iteration_iter-num> | |
599 <Iteration_query-ID>Query_3</Iteration_query-ID> | |
600 <Iteration_query-def>Probe|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
601 <Iteration_query-len>20</Iteration_query-len> | |
602 <Iteration_hits> | |
603 </Iteration_hits> | |
604 <Iteration_stat> | |
605 <Statistics> | |
606 <Statistics_db-num>0</Statistics_db-num> | |
607 <Statistics_db-len>0</Statistics_db-len> | |
608 <Statistics_hsp-len>8</Statistics_hsp-len> | |
609 <Statistics_eff-space>12312</Statistics_eff-space> | |
610 <Statistics_kappa>0.41</Statistics_kappa> | |
611 <Statistics_lambda>0.625</Statistics_lambda> | |
612 <Statistics_entropy>0.78</Statistics_entropy> | |
613 </Statistics> | |
614 </Iteration_stat> | |
615 <Iteration_message>No hits found</Iteration_message> | |
616 </Iteration> | |
617 <Iteration> | |
618 <Iteration_iter-num>24</Iteration_iter-num> | |
619 <Iteration_query-ID>Query_3</Iteration_query-ID> | |
620 <Iteration_query-def>Probe|NOST-Spec_(Genetic_ID)</Iteration_query-def> | |
621 <Iteration_query-len>20</Iteration_query-len> | |
622 <Iteration_hits> | |
623 </Iteration_hits> | |
624 <Iteration_stat> | |
625 <Statistics> | |
626 <Statistics_db-num>0</Statistics_db-num> | |
627 <Statistics_db-len>0</Statistics_db-len> | |
628 <Statistics_hsp-len>8</Statistics_hsp-len> | |
629 <Statistics_eff-space>12312</Statistics_eff-space> | |
630 <Statistics_kappa>0.41</Statistics_kappa> | |
631 <Statistics_lambda>0.625</Statistics_lambda> | |
632 <Statistics_entropy>0.78</Statistics_entropy> | |
633 </Statistics> | |
634 </Iteration_stat> | |
635 <Iteration_message>No hits found</Iteration_message> | |
636 </Iteration> | |
637 <Iteration> | |
638 <Iteration_iter-num>25</Iteration_iter-num> | |
639 <Iteration_query-ID>Query_4</Iteration_query-ID> | |
640 <Iteration_query-def>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
641 <Iteration_query-len>24</Iteration_query-len> | |
642 <Iteration_hits> | |
643 </Iteration_hits> | |
644 <Iteration_stat> | |
645 <Statistics> | |
646 <Statistics_db-num>0</Statistics_db-num> | |
647 <Statistics_db-len>0</Statistics_db-len> | |
648 <Statistics_hsp-len>9</Statistics_hsp-len> | |
649 <Statistics_eff-space>15375</Statistics_eff-space> | |
650 <Statistics_kappa>0.41</Statistics_kappa> | |
651 <Statistics_lambda>0.625</Statistics_lambda> | |
652 <Statistics_entropy>0.78</Statistics_entropy> | |
653 </Statistics> | |
654 </Iteration_stat> | |
655 <Iteration_message>No hits found</Iteration_message> | |
656 </Iteration> | |
657 <Iteration> | |
658 <Iteration_iter-num>26</Iteration_iter-num> | |
659 <Iteration_query-ID>Query_4</Iteration_query-ID> | |
660 <Iteration_query-def>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
661 <Iteration_query-len>24</Iteration_query-len> | |
662 <Iteration_hits> | |
663 </Iteration_hits> | |
664 <Iteration_stat> | |
665 <Statistics> | |
666 <Statistics_db-num>0</Statistics_db-num> | |
667 <Statistics_db-len>0</Statistics_db-len> | |
668 <Statistics_hsp-len>9</Statistics_hsp-len> | |
669 <Statistics_eff-space>15375</Statistics_eff-space> | |
670 <Statistics_kappa>0.41</Statistics_kappa> | |
671 <Statistics_lambda>0.625</Statistics_lambda> | |
672 <Statistics_entropy>0.78</Statistics_entropy> | |
673 </Statistics> | |
674 </Iteration_stat> | |
675 <Iteration_message>No hits found</Iteration_message> | |
676 </Iteration> | |
677 <Iteration> | |
678 <Iteration_iter-num>27</Iteration_iter-num> | |
679 <Iteration_query-ID>Query_4</Iteration_query-ID> | |
680 <Iteration_query-def>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
681 <Iteration_query-len>24</Iteration_query-len> | |
682 <Iteration_hits> | |
683 </Iteration_hits> | |
684 <Iteration_stat> | |
685 <Statistics> | |
686 <Statistics_db-num>0</Statistics_db-num> | |
687 <Statistics_db-len>0</Statistics_db-len> | |
688 <Statistics_hsp-len>9</Statistics_hsp-len> | |
689 <Statistics_eff-space>15375</Statistics_eff-space> | |
690 <Statistics_kappa>0.41</Statistics_kappa> | |
691 <Statistics_lambda>0.625</Statistics_lambda> | |
692 <Statistics_entropy>0.78</Statistics_entropy> | |
693 </Statistics> | |
694 </Iteration_stat> | |
695 <Iteration_message>No hits found</Iteration_message> | |
696 </Iteration> | |
697 <Iteration> | |
698 <Iteration_iter-num>28</Iteration_iter-num> | |
699 <Iteration_query-ID>Query_4</Iteration_query-ID> | |
700 <Iteration_query-def>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
701 <Iteration_query-len>24</Iteration_query-len> | |
702 <Iteration_hits> | |
703 </Iteration_hits> | |
704 <Iteration_stat> | |
705 <Statistics> | |
706 <Statistics_db-num>0</Statistics_db-num> | |
707 <Statistics_db-len>0</Statistics_db-len> | |
708 <Statistics_hsp-len>9</Statistics_hsp-len> | |
709 <Statistics_eff-space>15375</Statistics_eff-space> | |
710 <Statistics_kappa>0.41</Statistics_kappa> | |
711 <Statistics_lambda>0.625</Statistics_lambda> | |
712 <Statistics_entropy>0.78</Statistics_entropy> | |
713 </Statistics> | |
714 </Iteration_stat> | |
715 <Iteration_message>No hits found</Iteration_message> | |
716 </Iteration> | |
717 <Iteration> | |
718 <Iteration_iter-num>29</Iteration_iter-num> | |
719 <Iteration_query-ID>Query_4</Iteration_query-ID> | |
720 <Iteration_query-def>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
721 <Iteration_query-len>24</Iteration_query-len> | |
722 <Iteration_hits> | |
723 </Iteration_hits> | |
724 <Iteration_stat> | |
725 <Statistics> | |
726 <Statistics_db-num>0</Statistics_db-num> | |
727 <Statistics_db-len>0</Statistics_db-len> | |
728 <Statistics_hsp-len>9</Statistics_hsp-len> | |
729 <Statistics_eff-space>15375</Statistics_eff-space> | |
730 <Statistics_kappa>0.41</Statistics_kappa> | |
731 <Statistics_lambda>0.625</Statistics_lambda> | |
732 <Statistics_entropy>0.78</Statistics_entropy> | |
733 </Statistics> | |
734 </Iteration_stat> | |
735 <Iteration_message>No hits found</Iteration_message> | |
736 </Iteration> | |
737 <Iteration> | |
738 <Iteration_iter-num>30</Iteration_iter-num> | |
739 <Iteration_query-ID>Query_4</Iteration_query-ID> | |
740 <Iteration_query-def>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
741 <Iteration_query-len>24</Iteration_query-len> | |
742 <Iteration_hits> | |
743 </Iteration_hits> | |
744 <Iteration_stat> | |
745 <Statistics> | |
746 <Statistics_db-num>0</Statistics_db-num> | |
747 <Statistics_db-len>0</Statistics_db-len> | |
748 <Statistics_hsp-len>9</Statistics_hsp-len> | |
749 <Statistics_eff-space>15375</Statistics_eff-space> | |
750 <Statistics_kappa>0.41</Statistics_kappa> | |
751 <Statistics_lambda>0.625</Statistics_lambda> | |
752 <Statistics_entropy>0.78</Statistics_entropy> | |
753 </Statistics> | |
754 </Iteration_stat> | |
755 <Iteration_message>No hits found</Iteration_message> | |
756 </Iteration> | |
757 <Iteration> | |
758 <Iteration_iter-num>31</Iteration_iter-num> | |
759 <Iteration_query-ID>Query_4</Iteration_query-ID> | |
760 <Iteration_query-def>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
761 <Iteration_query-len>24</Iteration_query-len> | |
762 <Iteration_hits> | |
763 </Iteration_hits> | |
764 <Iteration_stat> | |
765 <Statistics> | |
766 <Statistics_db-num>0</Statistics_db-num> | |
767 <Statistics_db-len>0</Statistics_db-len> | |
768 <Statistics_hsp-len>9</Statistics_hsp-len> | |
769 <Statistics_eff-space>15375</Statistics_eff-space> | |
770 <Statistics_kappa>0.41</Statistics_kappa> | |
771 <Statistics_lambda>0.625</Statistics_lambda> | |
772 <Statistics_entropy>0.78</Statistics_entropy> | |
773 </Statistics> | |
774 </Iteration_stat> | |
775 <Iteration_message>No hits found</Iteration_message> | |
776 </Iteration> | |
777 <Iteration> | |
778 <Iteration_iter-num>32</Iteration_iter-num> | |
779 <Iteration_query-ID>Query_4</Iteration_query-ID> | |
780 <Iteration_query-def>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
781 <Iteration_query-len>24</Iteration_query-len> | |
782 <Iteration_hits> | |
783 </Iteration_hits> | |
784 <Iteration_stat> | |
785 <Statistics> | |
786 <Statistics_db-num>0</Statistics_db-num> | |
787 <Statistics_db-len>0</Statistics_db-len> | |
788 <Statistics_hsp-len>9</Statistics_hsp-len> | |
789 <Statistics_eff-space>15375</Statistics_eff-space> | |
790 <Statistics_kappa>0.41</Statistics_kappa> | |
791 <Statistics_lambda>0.625</Statistics_lambda> | |
792 <Statistics_entropy>0.78</Statistics_entropy> | |
793 </Statistics> | |
794 </Iteration_stat> | |
795 <Iteration_message>No hits found</Iteration_message> | |
796 </Iteration> | |
797 <Iteration> | |
798 <Iteration_iter-num>33</Iteration_iter-num> | |
799 <Iteration_query-ID>Query_5</Iteration_query-ID> | |
800 <Iteration_query-def>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
801 <Iteration_query-len>20</Iteration_query-len> | |
802 <Iteration_hits> | |
803 </Iteration_hits> | |
804 <Iteration_stat> | |
805 <Statistics> | |
806 <Statistics_db-num>0</Statistics_db-num> | |
807 <Statistics_db-len>0</Statistics_db-len> | |
808 <Statistics_hsp-len>8</Statistics_hsp-len> | |
809 <Statistics_eff-space>12312</Statistics_eff-space> | |
810 <Statistics_kappa>0.41</Statistics_kappa> | |
811 <Statistics_lambda>0.625</Statistics_lambda> | |
812 <Statistics_entropy>0.78</Statistics_entropy> | |
813 </Statistics> | |
814 </Iteration_stat> | |
815 <Iteration_message>No hits found</Iteration_message> | |
816 </Iteration> | |
817 <Iteration> | |
818 <Iteration_iter-num>34</Iteration_iter-num> | |
819 <Iteration_query-ID>Query_5</Iteration_query-ID> | |
820 <Iteration_query-def>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
821 <Iteration_query-len>20</Iteration_query-len> | |
822 <Iteration_hits> | |
823 </Iteration_hits> | |
824 <Iteration_stat> | |
825 <Statistics> | |
826 <Statistics_db-num>0</Statistics_db-num> | |
827 <Statistics_db-len>0</Statistics_db-len> | |
828 <Statistics_hsp-len>8</Statistics_hsp-len> | |
829 <Statistics_eff-space>12312</Statistics_eff-space> | |
830 <Statistics_kappa>0.41</Statistics_kappa> | |
831 <Statistics_lambda>0.625</Statistics_lambda> | |
832 <Statistics_entropy>0.78</Statistics_entropy> | |
833 </Statistics> | |
834 </Iteration_stat> | |
835 <Iteration_message>No hits found</Iteration_message> | |
836 </Iteration> | |
837 <Iteration> | |
838 <Iteration_iter-num>35</Iteration_iter-num> | |
839 <Iteration_query-ID>Query_5</Iteration_query-ID> | |
840 <Iteration_query-def>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
841 <Iteration_query-len>20</Iteration_query-len> | |
842 <Iteration_hits> | |
843 </Iteration_hits> | |
844 <Iteration_stat> | |
845 <Statistics> | |
846 <Statistics_db-num>0</Statistics_db-num> | |
847 <Statistics_db-len>0</Statistics_db-len> | |
848 <Statistics_hsp-len>8</Statistics_hsp-len> | |
849 <Statistics_eff-space>12312</Statistics_eff-space> | |
850 <Statistics_kappa>0.41</Statistics_kappa> | |
851 <Statistics_lambda>0.625</Statistics_lambda> | |
852 <Statistics_entropy>0.78</Statistics_entropy> | |
853 </Statistics> | |
854 </Iteration_stat> | |
855 <Iteration_message>No hits found</Iteration_message> | |
856 </Iteration> | |
857 <Iteration> | |
858 <Iteration_iter-num>36</Iteration_iter-num> | |
859 <Iteration_query-ID>Query_5</Iteration_query-ID> | |
860 <Iteration_query-def>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
861 <Iteration_query-len>20</Iteration_query-len> | |
862 <Iteration_hits> | |
863 </Iteration_hits> | |
864 <Iteration_stat> | |
865 <Statistics> | |
866 <Statistics_db-num>0</Statistics_db-num> | |
867 <Statistics_db-len>0</Statistics_db-len> | |
868 <Statistics_hsp-len>8</Statistics_hsp-len> | |
869 <Statistics_eff-space>12312</Statistics_eff-space> | |
870 <Statistics_kappa>0.41</Statistics_kappa> | |
871 <Statistics_lambda>0.625</Statistics_lambda> | |
872 <Statistics_entropy>0.78</Statistics_entropy> | |
873 </Statistics> | |
874 </Iteration_stat> | |
875 <Iteration_message>No hits found</Iteration_message> | |
876 </Iteration> | |
877 <Iteration> | |
878 <Iteration_iter-num>37</Iteration_iter-num> | |
879 <Iteration_query-ID>Query_5</Iteration_query-ID> | |
880 <Iteration_query-def>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
881 <Iteration_query-len>20</Iteration_query-len> | |
882 <Iteration_hits> | |
883 </Iteration_hits> | |
884 <Iteration_stat> | |
885 <Statistics> | |
886 <Statistics_db-num>0</Statistics_db-num> | |
887 <Statistics_db-len>0</Statistics_db-len> | |
888 <Statistics_hsp-len>8</Statistics_hsp-len> | |
889 <Statistics_eff-space>12312</Statistics_eff-space> | |
890 <Statistics_kappa>0.41</Statistics_kappa> | |
891 <Statistics_lambda>0.625</Statistics_lambda> | |
892 <Statistics_entropy>0.78</Statistics_entropy> | |
893 </Statistics> | |
894 </Iteration_stat> | |
895 <Iteration_message>No hits found</Iteration_message> | |
896 </Iteration> | |
897 <Iteration> | |
898 <Iteration_iter-num>38</Iteration_iter-num> | |
899 <Iteration_query-ID>Query_5</Iteration_query-ID> | |
900 <Iteration_query-def>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
901 <Iteration_query-len>20</Iteration_query-len> | |
902 <Iteration_hits> | |
903 </Iteration_hits> | |
904 <Iteration_stat> | |
905 <Statistics> | |
906 <Statistics_db-num>0</Statistics_db-num> | |
907 <Statistics_db-len>0</Statistics_db-len> | |
908 <Statistics_hsp-len>8</Statistics_hsp-len> | |
909 <Statistics_eff-space>12312</Statistics_eff-space> | |
910 <Statistics_kappa>0.41</Statistics_kappa> | |
911 <Statistics_lambda>0.625</Statistics_lambda> | |
912 <Statistics_entropy>0.78</Statistics_entropy> | |
913 </Statistics> | |
914 </Iteration_stat> | |
915 <Iteration_message>No hits found</Iteration_message> | |
916 </Iteration> | |
917 <Iteration> | |
918 <Iteration_iter-num>39</Iteration_iter-num> | |
919 <Iteration_query-ID>Query_5</Iteration_query-ID> | |
920 <Iteration_query-def>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
921 <Iteration_query-len>20</Iteration_query-len> | |
922 <Iteration_hits> | |
923 </Iteration_hits> | |
924 <Iteration_stat> | |
925 <Statistics> | |
926 <Statistics_db-num>0</Statistics_db-num> | |
927 <Statistics_db-len>0</Statistics_db-len> | |
928 <Statistics_hsp-len>8</Statistics_hsp-len> | |
929 <Statistics_eff-space>12312</Statistics_eff-space> | |
930 <Statistics_kappa>0.41</Statistics_kappa> | |
931 <Statistics_lambda>0.625</Statistics_lambda> | |
932 <Statistics_entropy>0.78</Statistics_entropy> | |
933 </Statistics> | |
934 </Iteration_stat> | |
935 <Iteration_message>No hits found</Iteration_message> | |
936 </Iteration> | |
937 <Iteration> | |
938 <Iteration_iter-num>40</Iteration_iter-num> | |
939 <Iteration_query-ID>Query_5</Iteration_query-ID> | |
940 <Iteration_query-def>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
941 <Iteration_query-len>20</Iteration_query-len> | |
942 <Iteration_hits> | |
943 </Iteration_hits> | |
944 <Iteration_stat> | |
945 <Statistics> | |
946 <Statistics_db-num>0</Statistics_db-num> | |
947 <Statistics_db-len>0</Statistics_db-len> | |
948 <Statistics_hsp-len>8</Statistics_hsp-len> | |
949 <Statistics_eff-space>12312</Statistics_eff-space> | |
950 <Statistics_kappa>0.41</Statistics_kappa> | |
951 <Statistics_lambda>0.625</Statistics_lambda> | |
952 <Statistics_entropy>0.78</Statistics_entropy> | |
953 </Statistics> | |
954 </Iteration_stat> | |
955 <Iteration_message>No hits found</Iteration_message> | |
956 </Iteration> | |
957 <Iteration> | |
958 <Iteration_iter-num>41</Iteration_iter-num> | |
959 <Iteration_query-ID>Query_6</Iteration_query-ID> | |
960 <Iteration_query-def>Probe|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
961 <Iteration_query-len>25</Iteration_query-len> | |
962 <Iteration_hits> | |
963 </Iteration_hits> | |
964 <Iteration_stat> | |
965 <Statistics> | |
966 <Statistics_db-num>0</Statistics_db-num> | |
967 <Statistics_db-len>0</Statistics_db-len> | |
968 <Statistics_hsp-len>9</Statistics_hsp-len> | |
969 <Statistics_eff-space>16400</Statistics_eff-space> | |
970 <Statistics_kappa>0.41</Statistics_kappa> | |
971 <Statistics_lambda>0.625</Statistics_lambda> | |
972 <Statistics_entropy>0.78</Statistics_entropy> | |
973 </Statistics> | |
974 </Iteration_stat> | |
975 <Iteration_message>No hits found</Iteration_message> | |
976 </Iteration> | |
977 <Iteration> | |
978 <Iteration_iter-num>42</Iteration_iter-num> | |
979 <Iteration_query-ID>Query_6</Iteration_query-ID> | |
980 <Iteration_query-def>Probe|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
981 <Iteration_query-len>25</Iteration_query-len> | |
982 <Iteration_hits> | |
983 </Iteration_hits> | |
984 <Iteration_stat> | |
985 <Statistics> | |
986 <Statistics_db-num>0</Statistics_db-num> | |
987 <Statistics_db-len>0</Statistics_db-len> | |
988 <Statistics_hsp-len>9</Statistics_hsp-len> | |
989 <Statistics_eff-space>16400</Statistics_eff-space> | |
990 <Statistics_kappa>0.41</Statistics_kappa> | |
991 <Statistics_lambda>0.625</Statistics_lambda> | |
992 <Statistics_entropy>0.78</Statistics_entropy> | |
993 </Statistics> | |
994 </Iteration_stat> | |
995 <Iteration_message>No hits found</Iteration_message> | |
996 </Iteration> | |
997 <Iteration> | |
998 <Iteration_iter-num>43</Iteration_iter-num> | |
999 <Iteration_query-ID>Query_6</Iteration_query-ID> | |
1000 <Iteration_query-def>Probe|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
1001 <Iteration_query-len>25</Iteration_query-len> | |
1002 <Iteration_hits> | |
1003 </Iteration_hits> | |
1004 <Iteration_stat> | |
1005 <Statistics> | |
1006 <Statistics_db-num>0</Statistics_db-num> | |
1007 <Statistics_db-len>0</Statistics_db-len> | |
1008 <Statistics_hsp-len>9</Statistics_hsp-len> | |
1009 <Statistics_eff-space>16400</Statistics_eff-space> | |
1010 <Statistics_kappa>0.41</Statistics_kappa> | |
1011 <Statistics_lambda>0.625</Statistics_lambda> | |
1012 <Statistics_entropy>0.78</Statistics_entropy> | |
1013 </Statistics> | |
1014 </Iteration_stat> | |
1015 <Iteration_message>No hits found</Iteration_message> | |
1016 </Iteration> | |
1017 <Iteration> | |
1018 <Iteration_iter-num>44</Iteration_iter-num> | |
1019 <Iteration_query-ID>Query_6</Iteration_query-ID> | |
1020 <Iteration_query-def>Probe|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
1021 <Iteration_query-len>25</Iteration_query-len> | |
1022 <Iteration_hits> | |
1023 </Iteration_hits> | |
1024 <Iteration_stat> | |
1025 <Statistics> | |
1026 <Statistics_db-num>0</Statistics_db-num> | |
1027 <Statistics_db-len>0</Statistics_db-len> | |
1028 <Statistics_hsp-len>9</Statistics_hsp-len> | |
1029 <Statistics_eff-space>16400</Statistics_eff-space> | |
1030 <Statistics_kappa>0.41</Statistics_kappa> | |
1031 <Statistics_lambda>0.625</Statistics_lambda> | |
1032 <Statistics_entropy>0.78</Statistics_entropy> | |
1033 </Statistics> | |
1034 </Iteration_stat> | |
1035 <Iteration_message>No hits found</Iteration_message> | |
1036 </Iteration> | |
1037 <Iteration> | |
1038 <Iteration_iter-num>45</Iteration_iter-num> | |
1039 <Iteration_query-ID>Query_6</Iteration_query-ID> | |
1040 <Iteration_query-def>Probe|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
1041 <Iteration_query-len>25</Iteration_query-len> | |
1042 <Iteration_hits> | |
1043 </Iteration_hits> | |
1044 <Iteration_stat> | |
1045 <Statistics> | |
1046 <Statistics_db-num>0</Statistics_db-num> | |
1047 <Statistics_db-len>0</Statistics_db-len> | |
1048 <Statistics_hsp-len>9</Statistics_hsp-len> | |
1049 <Statistics_eff-space>16400</Statistics_eff-space> | |
1050 <Statistics_kappa>0.41</Statistics_kappa> | |
1051 <Statistics_lambda>0.625</Statistics_lambda> | |
1052 <Statistics_entropy>0.78</Statistics_entropy> | |
1053 </Statistics> | |
1054 </Iteration_stat> | |
1055 <Iteration_message>No hits found</Iteration_message> | |
1056 </Iteration> | |
1057 <Iteration> | |
1058 <Iteration_iter-num>46</Iteration_iter-num> | |
1059 <Iteration_query-ID>Query_6</Iteration_query-ID> | |
1060 <Iteration_query-def>Probe|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
1061 <Iteration_query-len>25</Iteration_query-len> | |
1062 <Iteration_hits> | |
1063 </Iteration_hits> | |
1064 <Iteration_stat> | |
1065 <Statistics> | |
1066 <Statistics_db-num>0</Statistics_db-num> | |
1067 <Statistics_db-len>0</Statistics_db-len> | |
1068 <Statistics_hsp-len>9</Statistics_hsp-len> | |
1069 <Statistics_eff-space>16400</Statistics_eff-space> | |
1070 <Statistics_kappa>0.41</Statistics_kappa> | |
1071 <Statistics_lambda>0.625</Statistics_lambda> | |
1072 <Statistics_entropy>0.78</Statistics_entropy> | |
1073 </Statistics> | |
1074 </Iteration_stat> | |
1075 <Iteration_message>No hits found</Iteration_message> | |
1076 </Iteration> | |
1077 <Iteration> | |
1078 <Iteration_iter-num>47</Iteration_iter-num> | |
1079 <Iteration_query-ID>Query_6</Iteration_query-ID> | |
1080 <Iteration_query-def>Probe|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
1081 <Iteration_query-len>25</Iteration_query-len> | |
1082 <Iteration_hits> | |
1083 <Hit> | |
1084 <Hit_num>1</Hit_num> | |
1085 <Hit_id>Subject_7</Hit_id> | |
1086 <Hit_def>AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000</Hit_def> | |
1087 <Hit_accession>Subject_7</Hit_accession> | |
1088 <Hit_len>4180</Hit_len> | |
1089 <Hit_hsps> | |
1090 <Hsp> | |
1091 <Hsp_num>1</Hsp_num> | |
1092 <Hsp_bit-score>37.3537</Hsp_bit-score> | |
1093 <Hsp_score>40</Hsp_score> | |
1094 <Hsp_evalue>9.33825e-08</Hsp_evalue> | |
1095 <Hsp_query-from>1</Hsp_query-from> | |
1096 <Hsp_query-to>25</Hsp_query-to> | |
1097 <Hsp_hit-from>1541</Hsp_hit-from> | |
1098 <Hsp_hit-to>1565</Hsp_hit-to> | |
1099 <Hsp_query-frame>1</Hsp_query-frame> | |
1100 <Hsp_hit-frame>1</Hsp_hit-frame> | |
1101 <Hsp_identity>23</Hsp_identity> | |
1102 <Hsp_positive>23</Hsp_positive> | |
1103 <Hsp_gaps>0</Hsp_gaps> | |
1104 <Hsp_align-len>25</Hsp_align-len> | |
1105 <Hsp_qseq>ACATGAACAGCGCCTTGACCACAGC</Hsp_qseq> | |
1106 <Hsp_hseq>ACATGAACAGCGCCCTGACCACCGC</Hsp_hseq> | |
1107 <Hsp_midline>|||||||||||||| ||||||| ||</Hsp_midline> | |
1108 </Hsp> | |
1109 </Hit_hsps> | |
1110 </Hit> | |
1111 </Iteration_hits> | |
1112 <Iteration_stat> | |
1113 <Statistics> | |
1114 <Statistics_db-num>0</Statistics_db-num> | |
1115 <Statistics_db-len>0</Statistics_db-len> | |
1116 <Statistics_hsp-len>9</Statistics_hsp-len> | |
1117 <Statistics_eff-space>16400</Statistics_eff-space> | |
1118 <Statistics_kappa>0.41</Statistics_kappa> | |
1119 <Statistics_lambda>0.625</Statistics_lambda> | |
1120 <Statistics_entropy>0.78</Statistics_entropy> | |
1121 </Statistics> | |
1122 </Iteration_stat> | |
1123 </Iteration> | |
1124 <Iteration> | |
1125 <Iteration_iter-num>48</Iteration_iter-num> | |
1126 <Iteration_query-ID>Query_6</Iteration_query-ID> | |
1127 <Iteration_query-def>Probe|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
1128 <Iteration_query-len>25</Iteration_query-len> | |
1129 <Iteration_hits> | |
1130 <Hit> | |
1131 <Hit_num>1</Hit_num> | |
1132 <Hit_id>Subject_8</Hit_id> | |
1133 <Hit_def>EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000</Hit_def> | |
1134 <Hit_accession>Subject_8</Hit_accession> | |
1135 <Hit_len>4983</Hit_len> | |
1136 <Hit_hsps> | |
1137 <Hsp> | |
1138 <Hsp_num>1</Hsp_num> | |
1139 <Hsp_bit-score>37.3537</Hsp_bit-score> | |
1140 <Hsp_score>40</Hsp_score> | |
1141 <Hsp_evalue>9.33825e-08</Hsp_evalue> | |
1142 <Hsp_query-from>1</Hsp_query-from> | |
1143 <Hsp_query-to>25</Hsp_query-to> | |
1144 <Hsp_hit-from>2344</Hsp_hit-from> | |
1145 <Hsp_hit-to>2368</Hsp_hit-to> | |
1146 <Hsp_query-frame>1</Hsp_query-frame> | |
1147 <Hsp_hit-frame>1</Hsp_hit-frame> | |
1148 <Hsp_identity>23</Hsp_identity> | |
1149 <Hsp_positive>23</Hsp_positive> | |
1150 <Hsp_gaps>0</Hsp_gaps> | |
1151 <Hsp_align-len>25</Hsp_align-len> | |
1152 <Hsp_qseq>ACATGAACAGCGCCTTGACCACAGC</Hsp_qseq> | |
1153 <Hsp_hseq>ACATGAACAGCGCCCTGACCACCGC</Hsp_hseq> | |
1154 <Hsp_midline>|||||||||||||| ||||||| ||</Hsp_midline> | |
1155 </Hsp> | |
1156 </Hit_hsps> | |
1157 </Hit> | |
1158 </Iteration_hits> | |
1159 <Iteration_stat> | |
1160 <Statistics> | |
1161 <Statistics_db-num>0</Statistics_db-num> | |
1162 <Statistics_db-len>0</Statistics_db-len> | |
1163 <Statistics_hsp-len>9</Statistics_hsp-len> | |
1164 <Statistics_eff-space>16400</Statistics_eff-space> | |
1165 <Statistics_kappa>0.41</Statistics_kappa> | |
1166 <Statistics_lambda>0.625</Statistics_lambda> | |
1167 <Statistics_entropy>0.78</Statistics_entropy> | |
1168 </Statistics> | |
1169 </Iteration_stat> | |
1170 </Iteration> | |
1171 <Iteration> | |
1172 <Iteration_iter-num>49</Iteration_iter-num> | |
1173 <Iteration_query-ID>Query_7</Iteration_query-ID> | |
1174 <Iteration_query-def>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
1175 <Iteration_query-len>74</Iteration_query-len> | |
1176 <Iteration_hits> | |
1177 </Iteration_hits> | |
1178 <Iteration_stat> | |
1179 <Statistics> | |
1180 <Statistics_db-num>0</Statistics_db-num> | |
1181 <Statistics_db-len>0</Statistics_db-len> | |
1182 <Statistics_hsp-len>11</Statistics_hsp-len> | |
1183 <Statistics_eff-space>64449</Statistics_eff-space> | |
1184 <Statistics_kappa>0.41</Statistics_kappa> | |
1185 <Statistics_lambda>0.625</Statistics_lambda> | |
1186 <Statistics_entropy>0.78</Statistics_entropy> | |
1187 </Statistics> | |
1188 </Iteration_stat> | |
1189 <Iteration_message>No hits found</Iteration_message> | |
1190 </Iteration> | |
1191 <Iteration> | |
1192 <Iteration_iter-num>50</Iteration_iter-num> | |
1193 <Iteration_query-ID>Query_7</Iteration_query-ID> | |
1194 <Iteration_query-def>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
1195 <Iteration_query-len>74</Iteration_query-len> | |
1196 <Iteration_hits> | |
1197 </Iteration_hits> | |
1198 <Iteration_stat> | |
1199 <Statistics> | |
1200 <Statistics_db-num>0</Statistics_db-num> | |
1201 <Statistics_db-len>0</Statistics_db-len> | |
1202 <Statistics_hsp-len>11</Statistics_hsp-len> | |
1203 <Statistics_eff-space>64449</Statistics_eff-space> | |
1204 <Statistics_kappa>0.41</Statistics_kappa> | |
1205 <Statistics_lambda>0.625</Statistics_lambda> | |
1206 <Statistics_entropy>0.78</Statistics_entropy> | |
1207 </Statistics> | |
1208 </Iteration_stat> | |
1209 <Iteration_message>No hits found</Iteration_message> | |
1210 </Iteration> | |
1211 <Iteration> | |
1212 <Iteration_iter-num>51</Iteration_iter-num> | |
1213 <Iteration_query-ID>Query_7</Iteration_query-ID> | |
1214 <Iteration_query-def>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
1215 <Iteration_query-len>74</Iteration_query-len> | |
1216 <Iteration_hits> | |
1217 </Iteration_hits> | |
1218 <Iteration_stat> | |
1219 <Statistics> | |
1220 <Statistics_db-num>0</Statistics_db-num> | |
1221 <Statistics_db-len>0</Statistics_db-len> | |
1222 <Statistics_hsp-len>11</Statistics_hsp-len> | |
1223 <Statistics_eff-space>64449</Statistics_eff-space> | |
1224 <Statistics_kappa>0.41</Statistics_kappa> | |
1225 <Statistics_lambda>0.625</Statistics_lambda> | |
1226 <Statistics_entropy>0.78</Statistics_entropy> | |
1227 </Statistics> | |
1228 </Iteration_stat> | |
1229 <Iteration_message>No hits found</Iteration_message> | |
1230 </Iteration> | |
1231 <Iteration> | |
1232 <Iteration_iter-num>52</Iteration_iter-num> | |
1233 <Iteration_query-ID>Query_7</Iteration_query-ID> | |
1234 <Iteration_query-def>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
1235 <Iteration_query-len>74</Iteration_query-len> | |
1236 <Iteration_hits> | |
1237 </Iteration_hits> | |
1238 <Iteration_stat> | |
1239 <Statistics> | |
1240 <Statistics_db-num>0</Statistics_db-num> | |
1241 <Statistics_db-len>0</Statistics_db-len> | |
1242 <Statistics_hsp-len>11</Statistics_hsp-len> | |
1243 <Statistics_eff-space>64449</Statistics_eff-space> | |
1244 <Statistics_kappa>0.41</Statistics_kappa> | |
1245 <Statistics_lambda>0.625</Statistics_lambda> | |
1246 <Statistics_entropy>0.78</Statistics_entropy> | |
1247 </Statistics> | |
1248 </Iteration_stat> | |
1249 <Iteration_message>No hits found</Iteration_message> | |
1250 </Iteration> | |
1251 <Iteration> | |
1252 <Iteration_iter-num>53</Iteration_iter-num> | |
1253 <Iteration_query-ID>Query_7</Iteration_query-ID> | |
1254 <Iteration_query-def>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
1255 <Iteration_query-len>74</Iteration_query-len> | |
1256 <Iteration_hits> | |
1257 </Iteration_hits> | |
1258 <Iteration_stat> | |
1259 <Statistics> | |
1260 <Statistics_db-num>0</Statistics_db-num> | |
1261 <Statistics_db-len>0</Statistics_db-len> | |
1262 <Statistics_hsp-len>11</Statistics_hsp-len> | |
1263 <Statistics_eff-space>64449</Statistics_eff-space> | |
1264 <Statistics_kappa>0.41</Statistics_kappa> | |
1265 <Statistics_lambda>0.625</Statistics_lambda> | |
1266 <Statistics_entropy>0.78</Statistics_entropy> | |
1267 </Statistics> | |
1268 </Iteration_stat> | |
1269 <Iteration_message>No hits found</Iteration_message> | |
1270 </Iteration> | |
1271 <Iteration> | |
1272 <Iteration_iter-num>54</Iteration_iter-num> | |
1273 <Iteration_query-ID>Query_7</Iteration_query-ID> | |
1274 <Iteration_query-def>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
1275 <Iteration_query-len>74</Iteration_query-len> | |
1276 <Iteration_hits> | |
1277 </Iteration_hits> | |
1278 <Iteration_stat> | |
1279 <Statistics> | |
1280 <Statistics_db-num>0</Statistics_db-num> | |
1281 <Statistics_db-len>0</Statistics_db-len> | |
1282 <Statistics_hsp-len>11</Statistics_hsp-len> | |
1283 <Statistics_eff-space>64449</Statistics_eff-space> | |
1284 <Statistics_kappa>0.41</Statistics_kappa> | |
1285 <Statistics_lambda>0.625</Statistics_lambda> | |
1286 <Statistics_entropy>0.78</Statistics_entropy> | |
1287 </Statistics> | |
1288 </Iteration_stat> | |
1289 <Iteration_message>No hits found</Iteration_message> | |
1290 </Iteration> | |
1291 <Iteration> | |
1292 <Iteration_iter-num>55</Iteration_iter-num> | |
1293 <Iteration_query-ID>Query_7</Iteration_query-ID> | |
1294 <Iteration_query-def>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
1295 <Iteration_query-len>74</Iteration_query-len> | |
1296 <Iteration_hits> | |
1297 <Hit> | |
1298 <Hit_num>1</Hit_num> | |
1299 <Hit_id>Subject_7</Hit_id> | |
1300 <Hit_def>AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000</Hit_def> | |
1301 <Hit_accession>Subject_7</Hit_accession> | |
1302 <Hit_len>4180</Hit_len> | |
1303 <Hit_hsps> | |
1304 <Hsp> | |
1305 <Hsp_num>1</Hsp_num> | |
1306 <Hsp_bit-score>89.6514</Hsp_bit-score> | |
1307 <Hsp_score>98</Hsp_score> | |
1308 <Hsp_evalue>6.62923e-23</Hsp_evalue> | |
1309 <Hsp_query-from>1</Hsp_query-from> | |
1310 <Hsp_query-to>74</Hsp_query-to> | |
1311 <Hsp_hit-from>1516</Hsp_hit-from> | |
1312 <Hsp_hit-to>1589</Hsp_hit-to> | |
1313 <Hsp_query-frame>1</Hsp_query-frame> | |
1314 <Hsp_hit-frame>1</Hsp_hit-frame> | |
1315 <Hsp_identity>64</Hsp_identity> | |
1316 <Hsp_positive>64</Hsp_positive> | |
1317 <Hsp_gaps>0</Hsp_gaps> | |
1318 <Hsp_align-len>74</Hsp_align-len> | |
1319 <Hsp_qseq>GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTGTTCGCAGTCCAGAA</Hsp_qseq> | |
1320 <Hsp_hseq>GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTCTTCGCCGTCCAGAA</Hsp_hseq> | |
1321 <Hsp_midline>||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| | ||||| ||||||||</Hsp_midline> | |
1322 </Hsp> | |
1323 </Hit_hsps> | |
1324 </Hit> | |
1325 </Iteration_hits> | |
1326 <Iteration_stat> | |
1327 <Statistics> | |
1328 <Statistics_db-num>0</Statistics_db-num> | |
1329 <Statistics_db-len>0</Statistics_db-len> | |
1330 <Statistics_hsp-len>11</Statistics_hsp-len> | |
1331 <Statistics_eff-space>64449</Statistics_eff-space> | |
1332 <Statistics_kappa>0.41</Statistics_kappa> | |
1333 <Statistics_lambda>0.625</Statistics_lambda> | |
1334 <Statistics_entropy>0.78</Statistics_entropy> | |
1335 </Statistics> | |
1336 </Iteration_stat> | |
1337 </Iteration> | |
1338 <Iteration> | |
1339 <Iteration_iter-num>56</Iteration_iter-num> | |
1340 <Iteration_query-ID>Query_7</Iteration_query-ID> | |
1341 <Iteration_query-def>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</Iteration_query-def> | |
1342 <Iteration_query-len>74</Iteration_query-len> | |
1343 <Iteration_hits> | |
1344 <Hit> | |
1345 <Hit_num>1</Hit_num> | |
1346 <Hit_id>Subject_8</Hit_id> | |
1347 <Hit_def>EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000</Hit_def> | |
1348 <Hit_accession>Subject_8</Hit_accession> | |
1349 <Hit_len>4983</Hit_len> | |
1350 <Hit_hsps> | |
1351 <Hsp> | |
1352 <Hsp_num>1</Hsp_num> | |
1353 <Hsp_bit-score>89.6514</Hsp_bit-score> | |
1354 <Hsp_score>98</Hsp_score> | |
1355 <Hsp_evalue>6.62923e-23</Hsp_evalue> | |
1356 <Hsp_query-from>1</Hsp_query-from> | |
1357 <Hsp_query-to>74</Hsp_query-to> | |
1358 <Hsp_hit-from>2319</Hsp_hit-from> | |
1359 <Hsp_hit-to>2392</Hsp_hit-to> | |
1360 <Hsp_query-frame>1</Hsp_query-frame> | |
1361 <Hsp_hit-frame>1</Hsp_hit-frame> | |
1362 <Hsp_identity>64</Hsp_identity> | |
1363 <Hsp_positive>64</Hsp_positive> | |
1364 <Hsp_gaps>0</Hsp_gaps> | |
1365 <Hsp_align-len>74</Hsp_align-len> | |
1366 <Hsp_qseq>GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTGTTCGCAGTCCAGAA</Hsp_qseq> | |
1367 <Hsp_hseq>GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTCTTCGCCGTCCAGAA</Hsp_hseq> | |
1368 <Hsp_midline>||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| | ||||| ||||||||</Hsp_midline> | |
1369 </Hsp> | |
1370 </Hit_hsps> | |
1371 </Hit> | |
1372 </Iteration_hits> | |
1373 <Iteration_stat> | |
1374 <Statistics> | |
1375 <Statistics_db-num>0</Statistics_db-num> | |
1376 <Statistics_db-len>0</Statistics_db-len> | |
1377 <Statistics_hsp-len>11</Statistics_hsp-len> | |
1378 <Statistics_eff-space>64449</Statistics_eff-space> | |
1379 <Statistics_kappa>0.41</Statistics_kappa> | |
1380 <Statistics_lambda>0.625</Statistics_lambda> | |
1381 <Statistics_entropy>0.78</Statistics_entropy> | |
1382 </Statistics> | |
1383 </Iteration_stat> | |
1384 </Iteration> | |
1385 </BlastOutput_iterations> | |
1386 </BlastOutput> | |
1387 |