Mercurial > repos > jankanis > blast2html
comparison Blast output page example trimmed.html @ 2:f6cd51710678
more trimming down
author | Jan Kanis <jan.code@jankanis.nl> |
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date | Tue, 06 May 2014 17:41:24 +0200 |
parents | ffe82516a83c |
children | 9a8ac57e5680 |
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1:ffe82516a83c | 2:f6cd51710678 |
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12 <meta name="ncbi_stat" content="false"> | 12 <meta name="ncbi_stat" content="false"> |
13 <meta name="ncbi_sessionid" content="8A8E11EE2CABF371_0000SID"> | 13 <meta name="ncbi_sessionid" content="8A8E11EE2CABF371_0000SID"> |
14 <meta name="ncbi_phid" content="5AAB74D7368F2C81000000000000C9C8"> | 14 <meta name="ncbi_phid" content="5AAB74D7368F2C81000000000000C9C8"> |
15 <script type="text/javascript"> var ncbi_startTime = new Date(); </script> | 15 <script type="text/javascript"> var ncbi_startTime = new Date(); </script> |
16 <title>NCBI Blast:Nucleotide Sequence (16 letters)</title> | 16 <title>NCBI Blast:Nucleotide Sequence (16 letters)</title> |
17 <script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jig.js"></script><link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/jig.themenull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery.ncbitogglernull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbitogglernull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbiautocompletenull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.ncbiautocompletenull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery.ncbibasicmenunull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbibasicmenunull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbimenunull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.ncbimenunull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery.ncbilocalnavnull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbilocalnavnull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery.buttonnull"></script><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery.ncbibuttonnull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbibuttonnull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbipoppernull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.ncbipoppernull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbigridnull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.ncbigridnull"><link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/jig.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_005.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_004.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_004.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_007.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_003.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_007.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_003.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_008.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_008.js"></script><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_005.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_009.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_006.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_006.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002.css"> | 17 <script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jig.js"></script><link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/jig_002.themenull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_003.ncbitogglernull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbitogglernull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_003.ncbiautocompletenull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbiautocompletenull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbibasicmenunull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.ncbibasicmenunull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_003.ncbimenunull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbimenunull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_003.ncbilocalnavnull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.ncbilocalnavnull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002.buttonnull"></script><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery.ncbibuttonnull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_003.ncbibuttonnull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_004.ncbipoppernull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_003.ncbipoppernull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_003.ncbigridnull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.ncbigridnull"><link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/jig.themenull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery.ncbitogglernull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002_002.ncbitogglernull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002_002.ncbiautocompletenull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.ncbiautocompletenull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_003.ncbibasicmenunull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002_002.ncbibasicmenunull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002_002.ncbimenunull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.ncbimenunull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbilocalnavnull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002_002.ncbilocalnavnull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery.buttonnull"></script><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbibuttonnull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002_002.ncbibuttonnull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbipoppernull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.ncbipoppernull"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002_002.ncbigridnull"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002.ncbigridnull"><link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/jig.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_002.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_005.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_004.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_004.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_007.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_003.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_007.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_003.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_008.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_008.js"></script><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_005.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_009.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_006.css"><script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/jquery_006.js"></script><link type="text/css" rel="stylesheet" href="Blast%20output%20page%20example%20trimmed_files/jquery_002.css"> |
18 <script type="text/javascript"> jQuery.getScript("/core/alerts/alerts.js", function() { | 18 <script type="text/javascript"> jQuery.getScript("/core/alerts/alerts.js", function() { |
19 galert(['div#header', 'body > *:nth-child(1)']) | 19 galert(['div#header', 'body > *:nth-child(1)']) |
20 });</script> | 20 });</script> |
21 <link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/main.css" media="screen"> | 21 <link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/main.css" media="screen"> |
22 <link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/blastRes.css" media="screen"> | 22 <link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/blastRes.css" media="screen"> |
159 /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ | 159 /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ |
160 .fbProxyElement { | 160 .fbProxyElement { |
161 position: fixed !important; | 161 position: fixed !important; |
162 pointer-events: auto !important; | 162 pointer-events: auto !important; |
163 } | 163 } |
164 </style><style type="text/css" charset="utf-8">/* See license.txt for terms of usage */ | |
165 /** reset styling **/ | |
166 .firebugResetStyles { | |
167 z-index: 2147483646 !important; | |
168 top: 0 !important; | |
169 left: 0 !important; | |
170 display: block !important; | |
171 border: 0 none !important; | |
172 margin: 0 !important; | |
173 padding: 0 !important; | |
174 outline: 0 !important; | |
175 min-width: 0 !important; | |
176 max-width: none !important; | |
177 min-height: 0 !important; | |
178 max-height: none !important; | |
179 position: fixed !important; | |
180 transform: rotate(0deg) !important; | |
181 transform-origin: 50% 50% !important; | |
182 border-radius: 0 !important; | |
183 box-shadow: none !important; | |
184 background: transparent none !important; | |
185 pointer-events: none !important; | |
186 white-space: normal !important; | |
187 } | |
188 | |
189 .firebugBlockBackgroundColor { | |
190 background-color: transparent !important; | |
191 } | |
192 | |
193 .firebugResetStyles:before, .firebugResetStyles:after { | |
194 content: "" !important; | |
195 } | |
196 /**actual styling to be modified by firebug theme**/ | |
197 .firebugCanvas { | |
198 display: none !important; | |
199 } | |
200 | |
201 /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ | |
202 .firebugLayoutBox { | |
203 width: auto !important; | |
204 position: static !important; | |
205 } | |
206 | |
207 .firebugLayoutBoxOffset { | |
208 opacity: 0.8 !important; | |
209 position: fixed !important; | |
210 } | |
211 | |
212 .firebugLayoutLine { | |
213 opacity: 0.4 !important; | |
214 background-color: #000000 !important; | |
215 } | |
216 | |
217 .firebugLayoutLineLeft, .firebugLayoutLineRight { | |
218 width: 1px !important; | |
219 height: 100% !important; | |
220 } | |
221 | |
222 .firebugLayoutLineTop, .firebugLayoutLineBottom { | |
223 width: 100% !important; | |
224 height: 1px !important; | |
225 } | |
226 | |
227 .firebugLayoutLineTop { | |
228 margin-top: -1px !important; | |
229 border-top: 1px solid #999999 !important; | |
230 } | |
231 | |
232 .firebugLayoutLineRight { | |
233 border-right: 1px solid #999999 !important; | |
234 } | |
235 | |
236 .firebugLayoutLineBottom { | |
237 border-bottom: 1px solid #999999 !important; | |
238 } | |
239 | |
240 .firebugLayoutLineLeft { | |
241 margin-left: -1px !important; | |
242 border-left: 1px solid #999999 !important; | |
243 } | |
244 | |
245 /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ | |
246 .firebugLayoutBoxParent { | |
247 border-top: 0 none !important; | |
248 border-right: 1px dashed #E00 !important; | |
249 border-bottom: 1px dashed #E00 !important; | |
250 border-left: 0 none !important; | |
251 position: fixed !important; | |
252 width: auto !important; | |
253 } | |
254 | |
255 .firebugRuler{ | |
256 position: absolute !important; | |
257 } | |
258 | |
259 .firebugRulerH { | |
260 top: -15px !important; | |
261 left: 0 !important; | |
262 width: 100% !important; | |
263 height: 14px !important; | |
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276 border-left: 1px solid #BBBBBB !important; | |
277 border-right: 1px solid #000000 !important; | |
278 border-bottom: 1px dashed #BBBBBB !important; | |
279 } | |
280 | |
281 .overflowRulerX > .firebugRulerV { | |
282 left: 0 !important; | |
283 } | |
284 | |
285 .overflowRulerY > .firebugRulerH { | |
286 top: 0 !important; | |
287 } | |
288 | |
289 /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ | |
290 .fbProxyElement { | |
291 position: fixed !important; | |
292 pointer-events: auto !important; | |
293 } | |
164 </style></head> | 294 </style></head> |
165 | 295 |
166 <body id="type-a" class="noToggleCheck "> | 296 <body id="type-a" class="noToggleCheck "> |
167 <div id="wrap"> | 297 <div id="wrap"> |
168 | 298 |
201 | 331 |
202 | 332 |
203 <div id="page"> | 333 <div id="page"> |
204 | 334 |
205 <div id="summary" class=""> | 335 <div id="summary" class=""> |
206 <div id="ht"></div> | 336 |
207 <h1>Nucleotide Sequence (16 letters) <span id="hdTitle" class="shownInl"></span></h1> | 337 <h1>Nucleotide Sequence (16 letters) </h1> |
208 <div> | 338 |
209 <div id="multipleSeqs" class="hidden"> | |
210 <label for="queryList">Results for:</label> | |
211 <select id="queryList" name="queryList"> | |
212 <option value="0" selected="selected" class="">lcl|59987 None(16bp)</option> | |
213 </select> | |
214 <a aria-expanded="false" role="button" aria-disabled="false" class="helplink jig-ncbitoggler ui-ncbitoggler ui-widget" data-ncbitoggler-toggles="queryInfo" title="Multiple quries help" id="queryHelp" href="#"><span class="ui-ncbitoggler-master-text"><span>[?]</span></span> | |
215 <span class="ui-icon ui-icon-triangle-1-e"></span></a> | |
216 </div><!--/#multipleSeqs"--> | |
217 | |
218 <div class="ui-helper-reset" aria-live="assertive"> | |
219 <p aria-hidden="true" id="queryInfo" class="helpbox ui-ncbitoggler-slave ui-ncbitoggler"> | |
220 Your BLAST job specified more than one input sequence. | |
221 This box lets you choose which input sequence to show BLAST results for. | |
222 </p> | |
223 </div><!-- ARIA --> | |
224 </div> | |
225 <div id="summarylists"> | 339 <div id="summarylists"> |
226 <dl> | 340 <dl> |
227 <dt>RID</dt> | 341 <dt>RID</dt> |
228 <dd> | 342 <dd> |
229 <a title="BLAST search request ID" href="http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Get&RID=PHWP1JNZ014" target="lnkPHWP1JNZ014">PHWP1JNZ014</a> (Expires on 05-07 22:33 pm) | 343 <a title="BLAST search request ID" href="http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Get&RID=PHWP1JNZ014" target="lnkPHWP1JNZ014">PHWP1JNZ014</a> (Expires on 05-07 22:33 pm) |
255 <dt class="xgl">Program</dt> | 369 <dt class="xgl">Program</dt> |
256 <dd class="xgl">BLASTN 2.2.29+ <a aria-expanded="false" role="button" aria-disabled="false" href="#" title="How to cite BLAST in publications" class="resArrowLinkB hidden shown jig-ncbitoggler ui-ncbitoggler jtg ui-widget" data-ncbitoggler-toggles="refInfo" id="showRefs"><span class="ui-ncbitoggler-master-text">Citation</span><span class="ui-icon ui-icon-triangle-1-e"></span></a></dd> | 370 <dd class="xgl">BLASTN 2.2.29+ <a aria-expanded="false" role="button" aria-disabled="false" href="#" title="How to cite BLAST in publications" class="resArrowLinkB hidden shown jig-ncbitoggler ui-ncbitoggler jtg ui-widget" data-ncbitoggler-toggles="refInfo" id="showRefs"><span class="ui-ncbitoggler-master-text">Citation</span><span class="ui-icon ui-icon-triangle-1-e"></span></a></dd> |
257 </dl> | 371 </dl> |
258 </div><!--/#dbsummary--> | 372 </div><!--/#dbsummary--> |
259 </div><!--/#summarylists --> | 373 </div><!--/#summarylists --> |
260 <br> | 374 |
261 <div class="ui-helper-reset" aria-live="assertive"> | 375 <!-- aria end --> |
262 <div aria-hidden="true" id="dbDetails" class="helpbox ui-ncbitoggler-slave ui-ncbitoggler"> | 376 <!-- aria end --> |
263 <!-- multiple databases or subjects table --> | 377 |
264 </div> | 378 <!-- seealso --> |
265 </div> <!-- aria end --> | |
266 <div class="ui-helper-reset" aria-live="assertive"> | |
267 <div aria-hidden="true" id="refInfo" class="helpbox ui-ncbitoggler-slave ui-ncbitoggler"> | |
268 <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Retrieve&list_uids=9254694&dopt=Citation">Reference </a> | |
269 <div>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, | |
270 Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), | |
271 "Gapped BLAST and PSI-BLAST: a new generation of protein database search | |
272 programs", Nucleic Acids Res. 25:3389-3402.</div> | |
273 </div> <!-- refInfo --> | |
274 </div> <!-- aria end --> | |
275 | |
276 <div id="seealso"> | |
277 <label>Other reports:</label> | |
278 <a aria-expanded="false" role="button" aria-disabled="false" href="#" title="Show statistics" class="resArrowLinkB jtg jig-ncbitoggler ui-ncbitoggler ui-widget" data-ncbitoggler-toggles="resStat" id="showStat"><span class="ui-ncbitoggler-master-text">Search Summary</span><span class="ui-icon ui-icon-triangle-1-e"></span></a> | |
279 <span class="xgl"> | |
280 <a id="tax" class="hidden shown" href="http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Get&RID=PHWP1JNZ014&FORMAT_OBJECT=TaxBlast&NCBI_GI=off&DESCRIPTIONS=100&ALIGNMENTS=100&FORMAT_BLOCK_ON_RESPAGE=Top&MASK_COLOR=1&MASK_CHAR=2" target="lnkPHWP1JNZ014" title="See results arranged by taxonomy">[Taxonomy reports]</a> | |
281 <a href="http://www.ncbi.nlm.nih.gov/blast/treeview/treeView.cgi?request=page&blastRID=PHWP1JNZ014&queryID=lcl%7C59987&entrezLim=&ex=&exl=&exh=&ns=100" class="" id="TreeViewlcl|59987" onclick="ViewTree('TreeViewlcl|59987');return false;" target="lnkPHWP1JNZ014" title="See a distance tree of these pairwise comparisons">[Distance tree of results]</a> | |
282 | 379 |
283 | 380 <!-- aria end --> |
284 | |
285 </span> | |
286 </div> <!-- seealso --> | |
287 | |
288 <div class="ui-helper-reset" aria-live="assertive"> | |
289 <div aria-hidden="true" id="resStat" class="helpbox ui-ncbitoggler-slave ui-ncbitoggler"> | |
290 <table id="params" class="dbInfo"> | |
291 <caption>Search Parameters</caption> | |
292 <tbody><tr><th><div>Search parameter name</div></th><th><div>Search parameter value</div></th></tr> | |
293 <tr><td>Program</td><td>blastn</td></tr><tr><td>Word size</td><td>7</td></tr><tr><td>Expect value</td><td>1000</td></tr><tr><td>Hitlist size</td><td>100</td></tr><tr><td>Match/Mismatch scores</td><td>1,-3</td></tr><tr><td>Gapcosts</td><td>5,2</td></tr><tr><td>Filter string </td><td>F</td></tr><tr><td>Genetic Code</td><td>1</td></tr> | |
294 </tbody></table> | |
295 <table id="dbStat" class="dbInfo"> | |
296 <caption>Database</caption> | |
297 <tbody><tr><th><div>Database parameter name</div></th><th><div>Database parameter value</div></th></tr> | |
298 <tr><td>Posted date</td><td>Apr 29, 2014 3:14 AM</td></tr> | |
299 <tr><td>Number of letters</td><td>885,284</td></tr> | |
300 <tr><td>Number of sequences</td><td>8,975</td></tr> | |
301 <tr><td>Entrez query</td><td>none</td></tr> | |
302 </tbody></table> | |
303 | |
304 <table id="Kappa" class="dbInfo show xgl"> | |
305 <caption>Karlin-Altschul statistics</caption> | |
306 <tbody><tr><th><div>Params</div></th><th><div>Ungapped</div></th><th><div>Gapped</div></th></tr> | |
307 <tr><td>Lambda</td><td>1.37406</td><td>1.37406</td></tr> | |
308 <tr><td>K</td><td>0.710603</td><td>0.710603</td></tr> | |
309 <tr><td>H</td><td>1.30725</td><td>1.30725</td></tr> | |
310 | |
311 </tbody></table> | |
312 | |
313 | |
314 <table class="dbInfo show"> | |
315 <caption>Results Statistics</caption> | |
316 <tbody><tr><th><div>Results Statistics parameter name</div></th><th><div>Results Statistics parameter value</div></th></tr> | |
317 <tr><td>Length adjustment</td><td> 11</td></tr><tr><td>Effective length of query</td><td> 5</td></tr><tr><td>Effective length of database</td><td> 786559</td></tr><tr><td>Effective search space</td><td> 3932795</td></tr><tr><td>Effective search space used</td><td> 3932795</td></tr> | |
318 </tbody></table> | |
319 <!-- Results statistics --> | |
320 </div> <!-- resStat --> | |
321 </div> <!-- aria end --> | |
322 </div><!--/#summary--> | 381 </div><!--/#summary--> |
323 </div><!--/#page--> | 382 </div><!--/#page--> |
324 | 383 |
325 | 384 |
326 <div id="grView" class="hidden shown"> | 385 <div id="grView" class="hidden shown"> |
336 | 395 |
337 <div id="graphic" class="hidden shown"> | 396 <div id="graphic" class="hidden shown"> |
338 <h3>Distribution of 45 Blast Hits on the Query Sequence | 397 <h3>Distribution of 45 Blast Hits on the Query Sequence |
339 <a aria-expanded="false" role="button" aria-disabled="false" class="helplink jig-ncbitoggler ui-ncbitoggler ui-widget" title="Graphic summary help" id="grHelp" href="#"><span class="ui-ncbitoggler-master-text"><span>[?]</span></span> | 398 <a aria-expanded="false" role="button" aria-disabled="false" class="helplink jig-ncbitoggler ui-ncbitoggler ui-widget" title="Graphic summary help" id="grHelp" href="#"><span class="ui-ncbitoggler-master-text"><span>[?]</span></span> |
340 <span class="ui-icon ui-icon-triangle-1-e"></span></a></h3> | 399 <span class="ui-icon ui-icon-triangle-1-e"></span></a></h3> |
341 <div class="ui-helper-reset" aria-live="assertive"> | 400 <!-- ARIA --> |
342 <p aria-hidden="true" id="ovrInfo" class="helpbox ui-ncbitoggler-slave ui-ncbitoggler"> | |
343 An overview of the database sequences aligned to the query sequence is | |
344 shown. The score of each alignment is indicated by one of five | |
345 different colors, which divides the range of scores into five groups. | |
346 Multiple alignments on the same database sequence are connected | |
347 by a striped line. <span class="hl">Mousing over</span> a hit sequence causes the definition and score to be shown in the window at the top, | |
348 <span class="hl">clicking</span> on a hit sequence takes the user to the associated alignments. | |
349 New: | |
350 This graphic is an overview of database sequences aligned to the query sequence. | |
351 Alignments are color-coded by score, within one of five score ranges. | |
352 Multiple alignments on the same database sequence are connected by a dashed line. | |
353 <span class="hl">Mousing</span> over an alignment shows the alignment definition and score in the box at the top. | |
354 <span class="hl">Clicking</span> an alignment displays the alignment detail. | |
355 </p> | |
356 </div><!-- ARIA --> | |
357 <center><input name="defline" size="85" value="Mouse-over to show defline and scores, click to show alignments" type="text"><table bordercolordark="#0000FF" bordercolorlight="#0000FF" border="1" cellpadding="10" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><table border="0" cellpadding="0" cellspacing="1"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="50"></td> | 401 <center><input name="defline" size="85" value="Mouse-over to show defline and scores, click to show alignments" type="text"><table bordercolordark="#0000FF" bordercolorlight="#0000FF" border="1" cellpadding="10" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><table border="0" cellpadding="0" cellspacing="1"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="50"></td> |
358 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/score.gif" height="40" width="500"></td> | 402 <td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/score.gif" height="40" width="500"></td> |
359 </tr></tbody></table> | 403 </tr></tbody></table> |
360 <table border="0" cellpadding="0" cellspacing="1"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/query_no_scale.gif" height="10" width="550"></td></tr></tbody></table> | 404 <table border="0" cellpadding="0" cellspacing="1"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/query_no_scale.gif" height="10" width="550"></td></tr></tbody></table> |
361 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="51"></td> | 405 <table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td align="LEFT" valign="CENTER"><img alt="" src="Blast%20output%20page%20example%20trimmed_files/white.gif" height="4" width="51"></td> |
455 </a> | 499 </a> |
456 </h2> | 500 </h2> |
457 <div class="ui-helper-reset" aria-live="assertive"> | 501 <div class="ui-helper-reset" aria-live="assertive"> |
458 <div aria-hidden="false" id="descrInfo" class="resBox ui-ncbitoggler-slave-open ui-widget ui-ncbitoggler"> | 502 <div aria-hidden="false" id="descrInfo" class="resBox ui-ncbitoggler-slave-open ui-widget ui-ncbitoggler"> |
459 <!-- legend to links to other resources --> | 503 <!-- legend to links to other resources --> |
460 <a name="sort_mark"></a> | 504 |
461 | 505 |
462 | 506 |
463 <div id="debug">, Reading indexes 1-5, displaying indexes 1-5</div> | 507 |
464 <input id="Rid" value="PHWP1JNZ014" type="hidden"> | 508 |
465 <input id="useAlignDB" name="useAlignDB" value="" type="hidden"> | 509 |
466 <input id="dbType" value="GenBank" type="hidden"><!-- Indicates genbank, etc --> | 510 <!-- Indicates genbank, etc --> |
467 <input id="serviceType" value="plain" type="hidden"> | 511 |
468 <input id="clientType" value="web" type="hidden"> | 512 |
469 <input id="currQuery" value="" type="hidden"> | 513 |
470 <input id="minDispAlnLen" value="2000" type="hidden"> | 514 |
471 <input id="maxDispAlnLen" value="20000" type="hidden"> | 515 |
472 <div class="hidden" id="dynHspTmpl"><div class="alnParLinks moreHsps" id="@moreHspsID@"><a class="gbd toolsCtr navNext" title="Load matches @segs@ out of @totalHSP@ for @accs@" onmouseover="scan(this)" ref="range=@segs@&currseq=@alnSeqGi@" onclick="ReadNextHSPSet(@argstring@);"><span>Load next set</span></a><a class="gbd toolsCtr navPrev" title="Go to previous match #@aln_prev_num@ for @accs@" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a></div></div> | 516 |
473 <div id="descriptions" class="blRes"> | 517 <div id="descriptions" class="blRes"> |
474 <!--<pre> --> | 518 <!--<pre> --> |
475 <div class="cap">Sequences producing significant alignments:</div> | 519 <div class="cap">Sequences producing significant alignments:</div> |
476 <a id="shcl" href="#" onclick="showAllCol(event,this)" class="shcl hidden"> | 520 <a id="shcl" href="#" onclick="showAllCol(event,this)" class="shcl hidden"> |
477 Show all columns <span class="accsb"> of the table presenting sequences producing significant alignments </span> | 521 Show all columns <span class="accsb"> of the table presenting sequences producing significant alignments </span> |
483 | 527 |
484 <div id="descTblCtrl" class="cnf"> | 528 <div id="descTblCtrl" class="cnf"> |
485 <a href="#alignInfo" id="alnNav" class="toolsCtr alnNav" title="Go to alignments"><span>Alignments</span></a> | 529 <a href="#alignInfo" id="alnNav" class="toolsCtr alnNav" title="Go to alignments"><span>Alignments</span></a> |
486 <a aria-haspopup="true" aria-expanded="false" role="button" href="#dsDownload" minslct="1" class="jig-ncbipopper toolsCtr dnld dialog " data-jigconfig="hasArrow:'true',arrowDirection:'top'" id="dscDwnld" disabled="disabled" title="Download information for selected sequences"><span>Download</span></a> | 530 <a aria-haspopup="true" aria-expanded="false" role="button" href="#dsDownload" minslct="1" class="jig-ncbipopper toolsCtr dnld dialog " data-jigconfig="hasArrow:'true',arrowDirection:'top'" id="dscDwnld" disabled="disabled" title="Download information for selected sequences"><span>Download</span></a> |
487 | 531 |
488 <div style="top: -100px; left: -100px; display: none;" aria-hidden="true" aria-live="assertive" id="dsDownload" class="popDl ui-helper-reset ui-ncbipopper-wrapper ui-ncbipopper-basic"> | 532 <!-- dsDownload --> |
489 <div class=""><input name="dwn" checked="checked" id="dwFST" fstadwtype="complete" sbfunc="initDownLoadFSTA" type="radio"><label class="shownInl" for="dwFST">FASTA (complete sequence)</label></div> | |
490 <div class=""><input name="dwn" id="dwFSTAl" fstadwtype="range" sbfunc="initDownLoadFSTA" type="radio"><label class="shownInl" for="dwFSTAl">FASTA (aligned sequences)</label></div> | |
491 <div class=""><input name="dwn" id="dwGenBank" getgi="on" sbname="id" url="http://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=nuccore&rettype=gb&retmode=text" type="radio"><label class=" shownInl" for="dwGenBank">GenBank (complete sequence)</label></div> | |
492 <div><input name="dwn" id="dwHitText" url="Blast.cgi?RESULTS_FILE=on&RID=PHWP1JNZ014&FORMAT_TYPE=Text&FORMAT_OBJECT=Alignment&ALIGNMENT_VIEW=Tabular&CMD=Get" type="radio"><label class="shownInl" for="dwHitText">Hit Table (text)</label></div> | |
493 <div><input name="dwn" id="dwHitCsv" url="Blast.cgi?RESULTS_FILE=on&RID=PHWP1JNZ014&FORMAT_TYPE=CSV&FORMAT_OBJECT=Alignment&ALIGNMENT_VIEW=Tabular&CMD=Get" type="radio"><label class="shownInl" for="dwHitCsv">Hit Table (CSV)</label></div> | |
494 <div><input name="dwn" id="dwText" url="Blast.cgi?RESULTS_FILE=on&RID=PHWP1JNZ014&FORMAT_TYPE=Text&FORMAT_OBJECT=Alignment&CMD=Get" type="radio"><label class="shownInl" for="dwText">Text</label></div> | |
495 <div><input name="dwn" id="dwXML" url="Blast.cgi?RESULTS_FILE=on&RID=PHWP1JNZ014&FORMAT_TYPE=XML&FORMAT_OBJECT=Alignment&CMD=Get" type="radio"><label class="shownInl" for="dwXML">XML</label></div> | |
496 <div><input name="dwn" id="dwASN" url="Blast.cgi?RESULTS_FILE=on&RID=PHWP1JNZ014&FORMAT_TYPE=ASN.1&FORMAT_OBJECT=Alignment&CMD=Get" type="radio"><label class="shownInl" for="dwASN">ASN.1</label></div> | |
497 <div> | |
498 <button class="cfg" id="dw_cont">Continue</button> | |
499 <button class="cfg cnc">Cancel</button> | |
500 </div> | |
501 </div> <!-- dsDownload --> | |
502 | 533 |
503 | 534 |
504 | 535 |
505 | 536 |
506 | 537 |
507 <a href="#" class="toolsCtr" minslct="1" view="dflt" frm="submitterTop" seqlist="selSeqs" title="See genbank report for selected sequences" disabled="disabled">GenBank</a> <!-- genbank or Traces --> | 538 <a href="#" class="toolsCtr" minslct="1" view="dflt" frm="submitterTop" seqlist="selSeqs" title="See genbank report for selected sequences" disabled="disabled">GenBank</a> <!-- genbank or Traces --> |
508 <a href="#" class="toolsCtr " minslct="1" view="graph" title="See graphic representation for selected sequences" disabled="disabled">Graphics</a> | 539 <a href="#" class="toolsCtr " minslct="1" view="graph" title="See graphic representation for selected sequences" disabled="disabled">Graphics</a> |
509 <a href="#" class="toolsCtr hidden shown" view="tree" minslct="1" frm="sbmtTreeView" seqlist="selSeqsTr" disabled="disabled" title="See a distance tree of pairwise comparisons for the selected sequences">Distance tree of results</a> | 540 <a href="#" class="toolsCtr hidden shown" view="tree" minslct="1" frm="sbmtTreeView" seqlist="selSeqsTr" disabled="disabled" title="See a distance tree of pairwise comparisons for the selected sequences">Distance tree of results</a> |
510 <a href="#" class="toolsCtr hidden " view="dflt" minslct="2" frm="sbmtMultiAln" seqlist="selSeqsMl" disabled="disabled" title="See multple alignment of query and target sequences for the selected sequences with expect value better than 0.001">Multiple alignment</a> | 541 |
511 | 542 |
512 <a aria-haspopup="true" aria-expanded="false" role="button" class="jig-ncbipopper button_config" title="Show/hide columns" id="button_config" href="#dsConfig"><span class="accsb">Show/hide columns of the table presenting sequences producing significant alignments </span></a> | 543 <a aria-haspopup="true" aria-expanded="false" role="button" class="jig-ncbipopper button_config" title="Show/hide columns" id="button_config" href="#dsConfig"><span class="accsb">Show/hide columns of the table presenting sequences producing significant alignments </span></a> |
513 | 544 |
514 <div style="top: -100px; left: -100px; display: none;" aria-hidden="true" aria-live="assertive" id="dsConfig" class="popDl ui-helper-reset ui-ncbipopper-wrapper ui-ncbipopper-basic"> | 545 <!-- dsConfig --> |
515 <div class="tl">Available columns</div> | 546 |
516 <input checked="checked" id="chkDs" value="2" type="checkbox"><label class="shownInl" for="chkDs">Description</label><br> | 547 |
517 <input checked="checked" id="chkMS" value="3" type="checkbox"><label class="shownInl" for="chkMs">Max Score</label><br> | |
518 <input checked="checked" id="chkTS" value="4" type="checkbox"><label class="shownInl" for="chkTs">Total Score</label><br> | |
519 <input checked="checked" id="chkCov" value="5" type="checkbox"><label class="shownInl" for="chkCov">Coverage</label><br> | |
520 <input checked="checked" id="chkEval" value="6" type="checkbox"><label class="shownInl" for="chkEval">E-value</label><br> | |
521 <input checked="checked" id="chkIdnt" value="7" type="checkbox"><label class="shownInl" for="chkIdnt"><span class="">Ident</span><span class="hidden">N</span></label><br> | |
522 <input checked="checked" id="chkAcc" value="8" type="checkbox"><label class="shownInl" for="chkAcc">Accession</label><br> | |
523 <button class="cfg rdf" id="dscRsDf">Restore Defaults</button> | |
524 <button class="cfg" id="dscOk">Ok</button> | |
525 <button class="cfg cnc" id="dscCnc">Cancel</button> | |
526 </div> <!-- dsConfig --> | |
527 | |
528 <input id="cfcDsInf" defval="2,3,4,5,6,7,8" value="2,3,4,5,6,7,8" type="hidden"> | |
529 </div> | 548 </div> |
530 <div class="ui-ncbigrid-outer-div caption-exists"> | 549 <div class="ui-ncbigrid-outer-div caption-exists"> |
531 <div class="ui-ncbigrid-inner-div"> | 550 <div class="ui-ncbigrid-inner-div"> |
532 <table id="dscTable" class="jig-ncbigrid ui-ncbigrid" data-jigconfig="" cellpadding="0" cellspacing="0"> | 551 <table id="dscTable" class="jig-ncbigrid ui-ncbigrid" data-jigconfig="" cellpadding="0" cellspacing="0"> |
533 <caption class="hdnHeader">Sequences producing significant alignments:</caption> | 552 <caption class="hdnHeader">Sequences producing significant alignments:</caption> |
814 </div> | 833 </div> |
815 <div id="hd_557804451_2"> | 834 <div id="hd_557804451_2"> |
816 <div class="dflLnk hsp"><span class="alnRn"><label>Range 2: 2591 to 2598</label><span class="" id="rng_557804451"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804451?report=genbank&log$=nuclalign&blast_rank=1&RID=PHWP1JNZ014&from=2591&to=2598" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 2591 to 2598 on 3J5A_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804451?report=graph&rid=PHWP1JNZ014[557804451]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=2591:2598&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J5A_A in Nucleotide Graphics for 2591 to 2598 range">Graphics</a></span></span> | 835 <div class="dflLnk hsp"><span class="alnRn"><label>Range 2: 2591 to 2598</label><span class="" id="rng_557804451"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804451?report=genbank&log$=nuclalign&blast_rank=1&RID=PHWP1JNZ014&from=2591&to=2598" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 2591 to 2598 on 3J5A_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804451?report=graph&rid=PHWP1JNZ014[557804451]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=2591:2598&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J5A_A in Nucleotide Graphics for 2591 to 2598 range">Graphics</a></span></span> |
817 <span id="hsp557804451_2" class="alnParLinks"> | 836 <span id="hsp557804451_2" class="alnParLinks"> |
818 <a class="gbd toolsCtr navNext" title="Go to next match #3 for pdb|3J5A|A" onmouseover="scan(this)" ref="ordinalpos=2&currseq=557804451" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | 837 <a class="gbd toolsCtr navNext" title="Go to next match #3 for pdb|3J5A|A" onmouseover="scan(this)" ref="ordinalpos=2&currseq=557804451" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> |
819 <a class="gbd toolsCtr navPrev" title="Go to previous match #1 for pdb|3J5A|A" onmouseover="scan(this)" ref="ordinalpos=2&currseq=557804451" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | 838 <a init="on" class="gbd toolsCtr navPrev" title="Go to previous match #1 for pdb|3J5A|A" onmouseover="scan(this)" ref="ordinalpos=2&currseq=557804451" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> |
820 <a class="gbd toolsCtr navBack " href="#hsp557804451_1" title="Go to first match for pdb|3J5A|A"><span>First Match</span></a> | 839 <a class="gbd toolsCtr navBack " href="#hsp557804451_1" title="Go to first match for pdb|3J5A|A"><span>First Match</span></a> |
821 </span> | 840 </span> |
822 </div> | 841 </div> |
823 <table class="alnParams"> | 842 <table class="alnParams"> |
824 <caption class="hdnHeader">Alignment statistics for match #2</caption> | 843 <caption class="hdnHeader">Alignment statistics for match #2</caption> |
875 </pre> | 894 </pre> |
876 </div> | 895 </div> |
877 <div id="hd_557804451_4"> | 896 <div id="hd_557804451_4"> |
878 <div class="dflLnk hsp"><span class="alnRn"><label>Range 4: 2027 to 2033</label><span class="" id="rng_557804451"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804451?report=genbank&log$=nuclalign&blast_rank=1&RID=PHWP1JNZ014&from=2027&to=2033" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 2027 to 2033 on 3J5A_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804451?report=graph&rid=PHWP1JNZ014[557804451]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=2027:2033&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J5A_A in Nucleotide Graphics for 2027 to 2033 range">Graphics</a></span></span> | 897 <div class="dflLnk hsp"><span class="alnRn"><label>Range 4: 2027 to 2033</label><span class="" id="rng_557804451"><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804451?report=genbank&log$=nuclalign&blast_rank=1&RID=PHWP1JNZ014&from=2027&to=2033" class="" target="lnkPHWP1JNZ014" title="Aligned region spanning positions 2027 to 2033 on 3J5A_A">GenBank</a><a href="http://www.ncbi.nlm.nih.gov/nuccore/557804451?report=graph&rid=PHWP1JNZ014[557804451]&tracks=[key:sequence_track,name:Sequence,display_name:Sequence,id:STD1,category:Sequence,annots:Sequence,ShowLabel:true][key:gene_model_track,CDSProductFeats:false][key:alignment_track,name:other%20alignments,annots:NG%20Alignments%7CRefseq%20Alignments%7CGnomon%20Alignments%7CUnnamed,shown:false]&v=2027:2033&appname=ncbiblast&link_loc=fromHSP" class="spr" target="lnkPHWP1JNZ014" title="Show alignment to 3J5A_A in Nucleotide Graphics for 2027 to 2033 range">Graphics</a></span></span> |
879 <span id="hsp557804451_4" class="alnParLinks"> | 898 <span id="hsp557804451_4" class="alnParLinks"> |
880 <a class="gbd toolsCtr navNext" disabled="disabled" title="Go to next match #5 for pdb|3J5A|A" onmouseover="scan(this)" ref="ordinalpos=4&currseq=557804451" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> | 899 <a init="on" class="gbd toolsCtr navNext" disabled="disabled" title="Go to next match #5 for pdb|3J5A|A" onmouseover="scan(this)" ref="ordinalpos=4&currseq=557804451" onclick="goToNextHSP(this,true)"><span>Next Match</span></a> |
881 <a class="gbd toolsCtr navPrev" title="Go to previous match #3 for pdb|3J5A|A" onmouseover="scan(this)" ref="ordinalpos=4&currseq=557804451" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> | 900 <a init="on" class="gbd toolsCtr navPrev" title="Go to previous match #3 for pdb|3J5A|A" onmouseover="scan(this)" ref="ordinalpos=4&currseq=557804451" onclick="goToNextHSP(this,false)"><span>Previous Match</span></a> |
882 <a class="gbd toolsCtr navBack " href="#hsp557804451_1" title="Go to first match for pdb|3J5A|A"><span>First Match</span></a> | 901 <a class="gbd toolsCtr navBack " href="#hsp557804451_1" title="Go to first match for pdb|3J5A|A"><span>First Match</span></a> |
883 </span> | 902 </span> |
884 </div> | 903 </div> |
885 <table class="alnParams"> | 904 <table class="alnParams"> |
886 <caption class="hdnHeader">Alignment statistics for match #4</caption> | 905 <caption class="hdnHeader">Alignment statistics for match #4</caption> |
1602 </div><!--/#wrap--> | 1621 </div><!--/#wrap--> |
1603 | 1622 |
1604 <script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/utils.js"></script> | 1623 <script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/utils.js"></script> |
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1607 <script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/results.js"></script><link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/firefox-descriptions.css" media="screen"><link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/firefox-descriptions_002.css" media="screen"> | 1626 <script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/results.js"></script><link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/firefox-descriptions.css" media="screen"><link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/firefox-descriptions_003.css" media="screen"><link rel="stylesheet" type="text/css" href="Blast%20output%20page%20example%20trimmed_files/firefox-descriptions_002.css" media="screen"> |
1608 <script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/blast.js"></script> | 1627 <script type="text/javascript" src="Blast%20output%20page%20example%20trimmed_files/blast.js"></script> |
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1613 | 1632 |
1614 | 1633 |
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