Mercurial > repos > jankanis > blast2html
diff test-data/blast xml example4.html @ 114:4f0ed3b5ae46
update test results
| author | Jan Kanis <jan.code@jankanis.nl> |
|---|---|
| date | Wed, 09 Jul 2014 15:20:38 +0200 |
| parents | b3b5ee557170 |
| children | 7f3f8c10f44b |
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--- a/test-data/blast xml example4.html Wed Jul 09 15:19:53 2014 +0200 +++ b/test-data/blast xml example4.html Wed Jul 09 15:20:38 2014 +0200 @@ -40,20 +40,28 @@ } h1 { + font-size: 200%; + } + + h2 { + font-size: 150%; + } + + h1, h2 { border-bottom: 1px solid #CCCCCC; - font-size: 150%; padding-bottom: 0.1em; } - h2 { + h3 { font-size: 120%; font-weight: bold; } - h4.darkHeader { + h5.darkHeader { color: #4D4D4D; letter-spacing: 0; font-weight: bold; + font-size: 108%; } #nodata { @@ -385,9 +393,20 @@ <div id=content> + <section class=header> + + <h1>Nucleotide Blast results</h1> + + <table class=headerdata> + <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr> + <tr><td class=param>Database:</td><td>/opt/galaxy/blastdbs/EUginius_plasmid_insert</td></tr> + </table> + + </section> + <section class=index> - <h1>Queries</h1> + <h2>Queries</h2> <div class=indexentry><a href="#match1"> Query_1: Forward_Primer|NOST-Spec_(Genetic_ID) @@ -423,33 +442,32 @@ <section class=match id=match1> - <h1>Nucleotide Sequence (20 letters)</h1> + <h2>Nucleotide Sequence (20 letters)</h2> <section class=header> <table class=headerdata> + <tr><td class=param>Query number:</td><td>1</td></tr> <tr><td class=param>Query ID:</td><td>Query_1</td></tr> - <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr> - <tr><td class=param>Query length:</td><td>20</td></tr> - <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr> - <tr><td class=param>Database:</td><td>/opt/galaxy/blastdbs/EUginius_plasmid_insert</td></tr> + <tr><td class=param>Definition line:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr> + <tr><td class=param>Length:</td><td>20</td></tr> </table> </section> <section class=graphics> - <h2>Graphic Summary</h2> + <h3>Graphic Summary</h3> <div class=grey> - <h3 class=centered>Distribution of 7 Blast Hits on the Query Sequence</h3> + <h4 class=centered>Distribution of 7 Blast Hits on the Query Sequence</h4> <div class=defline id=defline1> Mouse-over to show defline and scores, click to show alignments </div> <div class=graphic> - <h4 class=darkHeader>Color key for alignment scores</h4> + <h5 class=darkHeader>Color key for alignment scores</h5> <div class=legend><div class=graphicrow> <div class=graphicitem style="background-color: black"><40</div> <div class=graphicitem style="background-color: blue">40–50</div> @@ -530,10 +548,10 @@ <section class=descriptions> - <h2>Descriptions</h2> + <h3>Descriptions</h3> <div class=grey><div class=white> - <h4 class=darkHeader>Sequences producing significant alignments:</h4> + <h5 class=darkHeader>Sequences producing significant alignments:</h5> <table class=descriptiontable> <col/><col/><col/><col/><col/><col/><col/> @@ -580,7 +598,7 @@ <section class=alignments> - <h2>Alignments</h2> + <h3>Alignments</h3> <div class=grey><div class=white> <div class=alignment id=hit1-1> @@ -673,22 +691,21 @@ <section class=match id=match2> - <h1>Nucleotide Sequence (20 letters)</h1> + <h2>Nucleotide Sequence (20 letters)</h2> <section class=header> <table class=headerdata> - <tr><td class=param>Query ID:</td><td>Query_1</td></tr> - <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr> - <tr><td class=param>Query length:</td><td>20</td></tr> - <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr> - <tr><td class=param>Database:</td><td>/opt/galaxy/blastdbs/EUginius_plasmid_insert</td></tr> + <tr><td class=param>Query number:</td><td>2</td></tr> + <tr><td class=param>Query ID:</td><td>Query_2</td></tr> + <tr><td class=param>Definition line:</td><td>Reverse_Primer|NOST-Spec_(Genetic_ID)</td></tr> + <tr><td class=param>Length:</td><td>20</td></tr> </table> </section> <section> - <h2>No Hits</h2> + <h3>No Hits</h3> <div class=grey> <table class=headerdata> <tr><td class=param>Message:</td><td>No hits found</td></tr> @@ -699,33 +716,32 @@ <section class=match id=match3> - <h1>Nucleotide Sequence (20 letters)</h1> + <h2>Nucleotide Sequence (20 letters)</h2> <section class=header> <table class=headerdata> - <tr><td class=param>Query ID:</td><td>Query_1</td></tr> - <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr> - <tr><td class=param>Query length:</td><td>20</td></tr> - <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr> - <tr><td class=param>Database:</td><td>/opt/galaxy/blastdbs/EUginius_plasmid_insert</td></tr> + <tr><td class=param>Query number:</td><td>3</td></tr> + <tr><td class=param>Query ID:</td><td>Query_3</td></tr> + <tr><td class=param>Definition line:</td><td>Probe|NOST-Spec_(Genetic_ID)</td></tr> + <tr><td class=param>Length:</td><td>20</td></tr> </table> </section> <section class=graphics> - <h2>Graphic Summary</h2> + <h3>Graphic Summary</h3> <div class=grey> - <h3 class=centered>Distribution of 7 Blast Hits on the Query Sequence</h3> + <h4 class=centered>Distribution of 7 Blast Hits on the Query Sequence</h4> <div class=defline id=defline3> Mouse-over to show defline and scores, click to show alignments </div> <div class=graphic> - <h4 class=darkHeader>Color key for alignment scores</h4> + <h5 class=darkHeader>Color key for alignment scores</h5> <div class=legend><div class=graphicrow> <div class=graphicitem style="background-color: black"><40</div> <div class=graphicitem style="background-color: blue">40–50</div> @@ -819,10 +835,10 @@ <section class=descriptions> - <h2>Descriptions</h2> + <h3>Descriptions</h3> <div class=grey><div class=white> - <h4 class=darkHeader>Sequences producing significant alignments:</h4> + <h5 class=darkHeader>Sequences producing significant alignments:</h5> <table class=descriptiontable> <col/><col/><col/><col/><col/><col/><col/> @@ -882,7 +898,7 @@ <section class=alignments> - <h2>Alignments</h2> + <h3>Alignments</h3> <div class=grey><div class=white> <div class=alignment id=hit3-1> @@ -1017,22 +1033,21 @@ <section class=match id=match4> - <h1>Nucleotide Sequence (24 letters)</h1> + <h2>Nucleotide Sequence (24 letters)</h2> <section class=header> <table class=headerdata> - <tr><td class=param>Query ID:</td><td>Query_1</td></tr> - <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr> - <tr><td class=param>Query length:</td><td>20</td></tr> - <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr> - <tr><td class=param>Database:</td><td>/opt/galaxy/blastdbs/EUginius_plasmid_insert</td></tr> + <tr><td class=param>Query number:</td><td>4</td></tr> + <tr><td class=param>Query ID:</td><td>Query_4</td></tr> + <tr><td class=param>Definition line:</td><td>Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr> + <tr><td class=param>Length:</td><td>24</td></tr> </table> </section> <section> - <h2>No Hits</h2> + <h3>No Hits</h3> <div class=grey> <table class=headerdata> <tr><td class=param>Message:</td><td>No hits found</td></tr> @@ -1043,22 +1058,21 @@ <section class=match id=match5> - <h1>Nucleotide Sequence (20 letters)</h1> + <h2>Nucleotide Sequence (20 letters)</h2> <section class=header> <table class=headerdata> - <tr><td class=param>Query ID:</td><td>Query_1</td></tr> - <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr> - <tr><td class=param>Query length:</td><td>20</td></tr> - <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr> - <tr><td class=param>Database:</td><td>/opt/galaxy/blastdbs/EUginius_plasmid_insert</td></tr> + <tr><td class=param>Query number:</td><td>5</td></tr> + <tr><td class=param>Query ID:</td><td>Query_5</td></tr> + <tr><td class=param>Definition line:</td><td>Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R</td></tr> + <tr><td class=param>Length:</td><td>20</td></tr> </table> </section> <section> - <h2>No Hits</h2> + <h3>No Hits</h3> <div class=grey> <table class=headerdata> <tr><td class=param>Message:</td><td>No hits found</td></tr> @@ -1069,33 +1083,32 @@ <section class=match id=match6> - <h1>Nucleotide Sequence (25 letters)</h1> + <h2>Nucleotide Sequence (25 letters)</h2> <section class=header> <table class=headerdata> - <tr><td class=param>Query ID:</td><td>Query_1</td></tr> - <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr> - <tr><td class=param>Query length:</td><td>20</td></tr> - <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr> - <tr><td class=param>Database:</td><td>/opt/galaxy/blastdbs/EUginius_plasmid_insert</td></tr> + <tr><td class=param>Query number:</td><td>6</td></tr> + <tr><td class=param>Query ID:</td><td>Query_6</td></tr> + <tr><td class=param>Definition line:</td><td>Probe|QL-ELE-Bt-F1(mod)/Bt-R</td></tr> + <tr><td class=param>Length:</td><td>25</td></tr> </table> </section> <section class=graphics> - <h2>Graphic Summary</h2> + <h3>Graphic Summary</h3> <div class=grey> - <h3 class=centered>Distribution of 7 Blast Hits on the Query Sequence</h3> + <h4 class=centered>Distribution of 7 Blast Hits on the Query Sequence</h4> <div class=defline id=defline6> Mouse-over to show defline and scores, click to show alignments </div> <div class=graphic> - <h4 class=darkHeader>Color key for alignment scores</h4> + <h5 class=darkHeader>Color key for alignment scores</h5> <div class=legend><div class=graphicrow> <div class=graphicitem style="background-color: black"><40</div> <div class=graphicitem style="background-color: blue">40–50</div> @@ -1177,10 +1190,10 @@ <section class=descriptions> - <h2>Descriptions</h2> + <h3>Descriptions</h3> <div class=grey><div class=white> - <h4 class=darkHeader>Sequences producing significant alignments:</h4> + <h5 class=darkHeader>Sequences producing significant alignments:</h5> <table class=descriptiontable> <col/><col/><col/><col/><col/><col/><col/> @@ -1227,7 +1240,7 @@ <section class=alignments> - <h2>Alignments</h2> + <h3>Alignments</h3> <div class=grey><div class=white> <div class=alignment id=hit6-1> @@ -1320,33 +1333,32 @@ <section class=match id=match7> - <h1>Nucleotide Sequence (74 letters)</h1> + <h2>Nucleotide Sequence (74 letters)</h2> <section class=header> <table class=headerdata> - <tr><td class=param>Query ID:</td><td>Query_1</td></tr> - <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr> - <tr><td class=param>Query length:</td><td>20</td></tr> - <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr> - <tr><td class=param>Database:</td><td>/opt/galaxy/blastdbs/EUginius_plasmid_insert</td></tr> + <tr><td class=param>Query number:</td><td>7</td></tr> + <tr><td class=param>Query ID:</td><td>Query_7</td></tr> + <tr><td class=param>Definition line:</td><td>Amplicon|QL-ELE-Bt-F1(mod)/Bt-R</td></tr> + <tr><td class=param>Length:</td><td>74</td></tr> </table> </section> <section class=graphics> - <h2>Graphic Summary</h2> + <h3>Graphic Summary</h3> <div class=grey> - <h3 class=centered>Distribution of 7 Blast Hits on the Query Sequence</h3> + <h4 class=centered>Distribution of 7 Blast Hits on the Query Sequence</h4> <div class=defline id=defline7> Mouse-over to show defline and scores, click to show alignments </div> <div class=graphic> - <h4 class=darkHeader>Color key for alignment scores</h4> + <h5 class=darkHeader>Color key for alignment scores</h5> <div class=legend><div class=graphicrow> <div class=graphicitem style="background-color: black"><40</div> <div class=graphicitem style="background-color: blue">40–50</div> @@ -1428,10 +1440,10 @@ <section class=descriptions> - <h2>Descriptions</h2> + <h3>Descriptions</h3> <div class=grey><div class=white> - <h4 class=darkHeader>Sequences producing significant alignments:</h4> + <h5 class=darkHeader>Sequences producing significant alignments:</h5> <table class=descriptiontable> <col/><col/><col/><col/><col/><col/><col/> @@ -1478,7 +1490,7 @@ <section class=alignments> - <h2>Alignments</h2> + <h3>Alignments</h3> <div class=grey><div class=white> <div class=alignment id=hit7-1>