Mercurial > repos > jankanis > blast2html
diff example_xmls/blast xml example1.xml @ 25:b77934f57522
add more example xmls, move them to a subdirectory
| author | Jan Kanis <jan.code@jankanis.nl> |
|---|---|
| date | Thu, 15 May 2014 12:24:02 +0200 |
| parents | blast xml example1.xml@bad241dc701f |
| children |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/example_xmls/blast xml example1.xml Thu May 15 12:24:02 2014 +0200 @@ -0,0 +1,6548 @@ +<?xml version="1.0"?> +<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> +<BlastOutput> + <BlastOutput_program>blastn</BlastOutput_program> + <BlastOutput_version>BLASTN 2.2.29+</BlastOutput_version> + <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference> + <BlastOutput_db>pdb</BlastOutput_db> + <BlastOutput_query-ID>106397</BlastOutput_query-ID> + <BlastOutput_query-def>No definition line</BlastOutput_query-def> + <BlastOutput_query-len>16</BlastOutput_query-len> + <BlastOutput_param> + <Parameters> + <Parameters_expect>1000</Parameters_expect> + <Parameters_sc-match>1</Parameters_sc-match> + <Parameters_sc-mismatch>-3</Parameters_sc-mismatch> + <Parameters_gap-open>5</Parameters_gap-open> + <Parameters_gap-extend>2</Parameters_gap-extend> + <Parameters_filter>F</Parameters_filter> + </Parameters> + </BlastOutput_param> +<BlastOutput_iterations> +<Iteration> + <Iteration_iter-num>1</Iteration_iter-num> + <Iteration_query-ID>106397</Iteration_query-ID> + <Iteration_query-def>No definition line</Iteration_query-def> + <Iteration_query-len>16</Iteration_query-len> +<Iteration_hits> +<Hit> + <Hit_num>1</Hit_num> + <Hit_id>gi|557804730|pdb|3J5K|A</Hit_id> + <Hit_def>Chain A, E. Coli 70s-fmetval-trnaval Post-translocation Complex (post4, 50s Subunit)</Hit_def> + <Hit_accession>3J5K_A</Hit_accession> + <Hit_len>2903</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>2</Hit_num> + <Hit_id>gi|557804675|pdb|3J5I|A</Hit_id> + <Hit_def>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3b, 50s Subunit)</Hit_def> + <Hit_accession>3J5I_A</Hit_accession> + <Hit_len>2903</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>3</Hit_num> + <Hit_id>gi|557804619|pdb|3J5G|A</Hit_id> + <Hit_def>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3a, 50s Subunit)</Hit_def> + <Hit_accession>3J5G_A</Hit_accession> + <Hit_len>2903</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>4</Hit_num> + <Hit_id>gi|557804563|pdb|3J5E|A</Hit_id> + <Hit_def>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2b, 50s Subunit)</Hit_def> + <Hit_accession>3J5E_A</Hit_accession> + <Hit_len>2903</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>5</Hit_num> + <Hit_id>gi|557804507|pdb|3J5C|A</Hit_id> + <Hit_def>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2a, 50s Subunit)</Hit_def> + <Hit_accession>3J5C_A</Hit_accession> + <Hit_len>2903</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>6</Hit_num> + <Hit_id>gi|557804451|pdb|3J5A|A</Hit_id> + <Hit_def>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Post- Translocation State (post1, 50s Subunit)</Hit_def> + <Hit_accession>3J5A_A</Hit_accession> + <Hit_len>2903</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>7</Hit_num> + <Hit_id>gi|557804395|pdb|3J58|A</Hit_id> + <Hit_def>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5b, 50s Subunit)</Hit_def> + <Hit_accession>3J58_A</Hit_accession> + <Hit_len>2903</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>8</Hit_num> + <Hit_id>gi|557804339|pdb|3J56|A</Hit_id> + <Hit_def>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5a, 50s Subunit)</Hit_def> + <Hit_accession>3J56_A</Hit_accession> + <Hit_len>2903</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>9</Hit_num> + <Hit_id>gi|557804283|pdb|3J54|A</Hit_id> + <Hit_def>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre4, 50s Subunit)</Hit_def> + <Hit_accession>3J54_A</Hit_accession> + <Hit_len>2903</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>10</Hit_num> + <Hit_id>gi|557804227|pdb|3J52|A</Hit_id> + <Hit_def>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1a, 50s Subunit)</Hit_def> + <Hit_accession>3J52_A</Hit_accession> + <Hit_len>2903</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>11</Hit_num> + <Hit_id>gi|557804195|pdb|3J51|A</Hit_id> + <Hit_def>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre3, 50s Subunit)</Hit_def> + <Hit_accession>3J51_A</Hit_accession> + <Hit_len>2903</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>12</Hit_num> + <Hit_id>gi|557804163|pdb|3J50|A</Hit_id> + <Hit_def>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre2, 50s Subunit)</Hit_def> + <Hit_accession>3J50_A</Hit_accession> + <Hit_len>2903</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>13</Hit_num> + <Hit_id>gi|557804083|pdb|3J4X|A</Hit_id> + <Hit_def>Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1b, 50s Subunit)</Hit_def> + <Hit_accession>3J4X_A</Hit_accession> + <Hit_len>2903</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>14</Hit_num> + <Hit_id>gi|474452808|pdb|3J37|A</Hit_id> + <Hit_def>Chain A, Tetracycline Resistance Protein Tet(o) Bound To The Ribosome</Hit_def> + <Hit_accession>3J37_A</Hit_accession> + <Hit_len>2904</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>15</Hit_num> + <Hit_id>gi|326634210|pdb|3IZT|B</Hit_id> + <Hit_def>Chain B, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Near-Cognate Codon. >gi|326634243|pdb|3IZU|B Chain B, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Cognate Codon >gi|380763703|pdb|3J0T|B Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class2 Of The Six Classes) >gi|380763785|pdb|3J0W|B Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 4a Of The Six Classes) >gi|380763843|pdb|3J0Y|B Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 4b Of The Six Classes) >gi|380763925|pdb|3J11|B Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 3 Of The Six Classes) >gi|380763959|pdb|3J12|B Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 5 Of The Six Classes) >gi|380764016|pdb|3J14|B Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 6 Of The Six Classes)</Hit_def> + <Hit_accession>3IZT_B</Hit_accession> + <Hit_len>2904</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>16</Hit_num> + <Hit_id>gi|224510767|pdb|3FIK|B</Hit_id> + <Hit_def>Chain B, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 50s Subunit. >gi|257097373|pdb|3I1N|A Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting >gi|257097425|pdb|3I1P|A Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting >gi|257097479|pdb|3I1R|A Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting >gi|257097533|pdb|3I1T|A Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting >gi|257097588|pdb|3I20|A Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting >gi|257097643|pdb|3I22|A Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting >gi|294662251|pdb|2WWQ|B Chain B, E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. This File Contains The 50s, The P-Site Trna And The Tnac Leader Peptide (Part 2 Of 2). >gi|309320065|pdb|3OFC|A Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The First 70s Ribosome With Chloramphenicol Bound. >gi|309320169|pdb|3OFZ|A Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Clindamycin. >gi|309320200|pdb|3OG0|A Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. >gi|315113654|pdb|3OAS|A Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. >gi|315113685|pdb|3OAT|A Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Telithromycin Bound. >gi|334359437|pdb|3R8S|A Chain A, Structures Of The Bacterial Ribosome In Classical And Hybrid States Of Trna Binding >gi|334359468|pdb|3R8T|A Chain A, Structures Of The Bacterial Ribosome In Classical And Hybrid States Of Trna Binding >gi|371927526|pdb|3SGF|A Chain A, Crystal Structure Of Release Factor Rf3 Trapped In The Gtp State On A Rotated Conformation Of The Ribosome >gi|371927651|pdb|3UOS|A Chain A, Crystal Structure Of Release Factor Rf3 Trapped In The Gtp State On A Rotated Conformation Of The Ribosome (Without Viomycin) >gi|386783121|pdb|3J19|A Chain A, Structure Of The Bacterial Ribosome Complexed By Tmrna-Smpb And Ef-G During Translocation And Mld-Loading (50s Subunit) >gi|567754995|pdb|3J5U|A Chain A, Structure Of The Ribosome With Elongation Factor G Trapped In The Pre- Translocation State (pre-translocation 70s*trna Structure, 50s Subunit) >gi|567755029|pdb|3J5W|A Chain A, Structure Of The Ribosome With Elongation Factor G Trapped In The Pre- Translocation State (pre-translocation 70s*trna*ef-g Structure, 50s Subunit)</Hit_def> + <Hit_accession>3FIK_B</Hit_accession> + <Hit_len>2903</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>17</Hit_num> + <Hit_id>gi|256032374|pdb|3E1B|B</Hit_id> + <Hit_def>Chain B, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre-Accommodation State >gi|256032431|pdb|3E1D|B Chain B, Structure Of The 50s Subunit Of E. Coli Ribosome In Post-Accommodation State</Hit_def> + <Hit_accession>3E1B_B</Hit_accession> + <Hit_len>2903</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>18</Hit_num> + <Hit_id>gi|157883716|pdb|2GYC|0</Hit_id> + <Hit_def>Chain 0, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143</Hit_def> + <Hit_accession>2GYC_0</Hit_accession> + <Hit_len>2740</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>889</Hsp_hit-from> + <Hsp_hit-to>904</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2453</Hsp_hit-from> + <Hsp_hit-to>2460</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>776</Hsp_hit-from> + <Hsp_hit-to>782</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>1910</Hsp_hit-from> + <Hsp_hit-to>1916</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>19</Hit_num> + <Hit_id>gi|157883710|pdb|2GYA|0</Hit_id> + <Hit_def>Chain 0, Structure Of The 50s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056</Hit_def> + <Hit_accession>2GYA_0</Hit_accession> + <Hit_len>2740</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>889</Hsp_hit-from> + <Hsp_hit-to>904</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2453</Hsp_hit-from> + <Hsp_hit-to>2460</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>776</Hsp_hit-from> + <Hsp_hit-to>782</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>1910</Hsp_hit-from> + <Hsp_hit-to>1916</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>20</Hit_num> + <Hit_id>gi|122922257|pdb|2I2V|B</Hit_id> + <Hit_def>Chain B, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.</Hit_def> + <Hit_accession>2I2V_B</Hit_accession> + <Hit_len>2904</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>21</Hit_num> + <Hit_id>gi|83754062|pdb|2AW4|B</Hit_id> + <Hit_def>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. >gi|122922241|pdb|2I2T|B Chain B, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. >gi|157836046|pdb|2QOV|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. >gi|157836098|pdb|2QOX|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. >gi|157836150|pdb|2QOZ|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. >gi|157836202|pdb|2QP1|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. >gi|158429721|pdb|2QAM|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. >gi|158429773|pdb|2QAO|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. >gi|158429831|pdb|2QBA|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. >gi|158429883|pdb|2QBC|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. >gi|158429935|pdb|2QBE|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. >gi|158429988|pdb|2QBG|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. >gi|158430041|pdb|2QBI|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. >gi|158430094|pdb|2QBK|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. >gi|158431394|pdb|2Z4L|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. >gi|158431447|pdb|2Z4N|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. >gi|168988732|pdb|2VHM|B Chain B, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 1 Of 4) >gi|168988763|pdb|2VHN|B Chain B, Structure Of Pdf Binding Helix In Complex With The Ribosome. (Part 2 Of 4) >gi|169404603|pdb|2RDO|B Chain B, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound >gi|197107301|pdb|3DF2|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. >gi|197107353|pdb|3DF4|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. >gi|290560329|pdb|3KCR|8 Chain 8, Ribosome-Secy Complex. This Entry 3kcr Contains 50s Ribosomal Subnit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3kc4 >gi|308198729|pdb|3ORB|A Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Cem-101. >gi|308388007|pdb|3OFQ|A Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. >gi|308388038|pdb|3OFR|A Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Erthromycin Bound. >gi|309320096|pdb|3OFD|A Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The Second 70s Ribosome. >gi|329666014|pdb|3J01|8 Chain 8, Structure Of The Ribosome-Secye Complex In The Membrane Environment >gi|402550607|pdb|4GAR|A Chain A, Allosteric Control Of The Ribosome By Small-Molecule Antibiotics >gi|402550662|pdb|4GAU|A Chain A, Allosteric Control Of The Ribosome By Small-Molecule Antibiotics >gi|524934273|pdb|4KIX|A Chain A, Control Of Ribosomal Subunit Rotation By Elongation Factor G >gi|524934341|pdb|4KIZ|A Chain A, Control Of Ribosomal Subunit Rotation By Elongation Factor G >gi|524934404|pdb|4KJ1|A Chain A, Control Of Ribosomal Subunit Rotation By Elongation Factor G >gi|524934483|pdb|4KJ3|A Chain A, Control Of Ribosomal Subunit Rotation By Elongation Factor G >gi|524934551|pdb|4KJ5|A Chain A, Control Of Ribosomal Subunit Rotation By Elongation Factor G >gi|524934613|pdb|4KJ7|A Chain A, Control Of Ribosomal Subunit Rotation By Elongation Factor G >gi|524934678|pdb|4KJ9|A Chain A, Control Of Ribosomal Subunit Rotation By Elongation Factor G >gi|524934740|pdb|4KJB|A Chain A, Control Of Ribosomal Subunit Rotation By Elongation Factor G >gi|564730763|pdb|3J5O|A Chain A, Visualization Of Two Trnas Trapped In Transit During Ef-g-mediated Translocation (50s Subunit) >gi|597959819|pdb|3J5L|A Chain A, Structure Of The E. Coli 50s Subunit With Ermbl Nascent Chain</Hit_def> + <Hit_accession>2AW4_B</Hit_accession> + <Hit_len>2904</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>22</Hit_num> + <Hit_id>gi|83754118|pdb|2AWB|B</Hit_id> + <Hit_def>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. >gi|126031747|pdb|2J28|B Chain B, Model Of E. Coli Srp Bound To 70s Rncs >gi|157880574|pdb|1VS8|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.</Hit_def> + <Hit_accession>2AWB_B</Hit_accession> + <Hit_len>2904</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>23</Hit_num> + <Hit_id>gi|157880571|pdb|1VS6|B</Hit_id> + <Hit_def>Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. >gi|209870354|pdb|3BBX|B Chain B, The Hsp15 Protein Fitted Into The Low Resolution Cryo-Em Map 50s.Nc-Trna.Hsp15 Complex >gi|222447037|pdb|3DG0|B Chain B, Coordinates Of 16s And 23s Rrnas Fitted Into The Cryo-Em Map Of Ef-G-Bound Translocation Complex >gi|222447039|pdb|3DG2|B Chain B, Coordinates Of 16s And 23s Rrnas Fitted Into The Cryo-Em Map Of A Pretranslocation Complex >gi|222447041|pdb|3DG4|B Chain B, Coordinates Of 16s And 23s Rrnas Fitted Into The Cryo-Em Map Of Rf1-Bound Termination Complex >gi|222447043|pdb|3DG5|B Chain B, Coordinates Of 16s And 23s Rrnas Fitted Into The Cryo-Em Map Of Rf3-Bound Termination Complex >gi|308198355|pdb|1VT2|A Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The Second 70s Ribosome.</Hit_def> + <Hit_accession>1VS6_B</Hit_accession> + <Hit_len>2904</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>24</Hit_num> + <Hit_id>gi|33357900|pdb|1P85|0</Hit_id> + <Hit_def>Chain 0, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome >gi|33357927|pdb|1P86|0 Chain 0, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Initiation-Like State Of E. Coli 70s Ribosome</Hit_def> + <Hit_accession>1P85_0</Hit_accession> + <Hit_len>2904</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>32.2105</Hsp_bit-score> + <Hsp_score>16</Hsp_score> + <Hsp_evalue>0.000791334</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>16</Hsp_identity> + <Hsp_positive>16</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>16</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2591</Hsp_hit-from> + <Hsp_hit-to>2598</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2027</Hsp_hit-from> + <Hsp_hit-to>2033</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>25</Hit_num> + <Hit_id>gi|7767146|pdb|1C2W|B</Hit_id> + <Hit_def>Chain B, 23s Rrna Structure Fitted To A Cryo-Electron Microscopic Map At 7.5 Angstroms Resolution</Hit_def> + <Hit_accession>1C2W_B</Hit_accession> + <Hit_len>2904</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>26.2635</Hsp_bit-score> + <Hsp_score>13</Hsp_score> + <Hsp_evalue>0.0488207</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>961</Hsp_hit-from> + <Hsp_hit-to>973</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>13</Hsp_identity> + <Hsp_positive>13</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>13</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAA</Hsp_qseq> + <Hsp_hseq>CGTCCGTCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>839</Hsp_hit-from> + <Hsp_hit-to>845</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCGTGAA</Hsp_qseq> + <Hsp_hseq>TCGTGAA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>26</Hit_num> + <Hit_id>gi|582044940|pdb|3J62|AA</Hit_id> + <Hit_def>Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome</Hit_def> + <Hit_accession>3J62_AA</Hit_accession> + <Hit_len>3391</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2961</Hsp_hit-from> + <Hsp_hit-to>2969</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>2</Hsp_query-from> + <Hsp_query-to>9</Hsp_query-to> + <Hsp_hit-from>177</Hsp_hit-from> + <Hsp_hit-to>170</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>GTCCGTCG</Hsp_qseq> + <Hsp_hseq>GTCCGTCG</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>10</Hsp_query-to> + <Hsp_hit-from>553</Hsp_hit-from> + <Hsp_hit-to>559</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>CCGTCGT</Hsp_qseq> + <Hsp_hseq>CCGTCGT</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>2</Hsp_query-from> + <Hsp_query-to>8</Hsp_query-to> + <Hsp_hit-from>2048</Hsp_hit-from> + <Hsp_hit-to>2042</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCCGTC</Hsp_qseq> + <Hsp_hseq>GTCCGTC</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>5</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2211</Hsp_hit-from> + <Hsp_hit-to>2217</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>27</Hit_num> + <Hit_id>gi|567755268|pdb|4CE4|A</Hit_id> + <Hit_def>Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome</Hit_def> + <Hit_accession>4CE4_A</Hit_accession> + <Hit_len>1570</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>1020</Hsp_hit-from> + <Hsp_hit-to>1028</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>28</Hit_num> + <Hit_id>gi|558704783|pdb|4BYP|5</Hit_id> + <Hit_def>Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex</Hit_def> + <Hit_accession>4BYP_5</Hit_accession> + <Hit_len>3396</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2959</Hsp_hit-from> + <Hsp_hit-to>2967</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>1634</Hsp_hit-from> + <Hsp_hit-to>1627</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTGAAGA</Hsp_qseq> + <Hsp_hseq>CGTGAAGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>2435</Hsp_hit-from> + <Hsp_hit-to>2442</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>GTGAAGAG</Hsp_qseq> + <Hsp_hseq>GTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>10</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>1100</Hsp_hit-from> + <Hsp_hit-to>1106</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TGAAGAG</Hsp_qseq> + <Hsp_hseq>TGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>5</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2216</Hsp_hit-from> + <Hsp_hit-to>2222</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>29</Hit_num> + <Hit_id>gi|558704825|pdb|4BYW|5</Hit_id> + <Hit_def>Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex</Hit_def> + <Hit_accession>4BYW_5</Hit_accession> + <Hit_len>3396</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2959</Hsp_hit-from> + <Hsp_hit-to>2967</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>1634</Hsp_hit-from> + <Hsp_hit-to>1627</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTGAAGA</Hsp_qseq> + <Hsp_hseq>CGTGAAGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>2435</Hsp_hit-from> + <Hsp_hit-to>2442</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>GTGAAGAG</Hsp_qseq> + <Hsp_hseq>GTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>10</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>1100</Hsp_hit-from> + <Hsp_hit-to>1106</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TGAAGAG</Hsp_qseq> + <Hsp_hseq>TGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>5</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2216</Hsp_hit-from> + <Hsp_hit-to>2222</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>30</Hit_num> + <Hit_id>gi|551701574|pdb|3J44|1</Hit_id> + <Hit_def>Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)</Hit_def> + <Hit_accession>3J44_1</Hit_accession> + <Hit_len>3049</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>651</Hsp_hit-from> + <Hsp_hit-to>663</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>12</Hsp_identity> + <Hsp_positive>12</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>13</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAA</Hsp_qseq> + <Hsp_hseq>CGTCCGTCTTGAA</Hsp_hseq> + <Hsp_midline>|||||||| ||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2705</Hsp_hit-from> + <Hsp_hit-to>2713</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>31</Hit_num> + <Hit_id>gi|508123724|pdb|4HUB|0</Hit_id> + <Hit_def>Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins</Hit_def> + <Hit_accession>4HUB_0</Hit_accession> + <Hit_len>2910</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>298</Hsp_hit-from> + <Hsp_hit-to>290</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2618</Hsp_hit-from> + <Hsp_hit-to>2626</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2599</Hsp_hit-from> + <Hsp_hit-to>2605</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>32</Hit_num> + <Hit_id>gi|485601478|pdb|3J3F|5</Hit_id> + <Hit_def>Chain 5, Structure Of The H. Sapiens 60s Rrna</Hit_def> + <Hit_accession>3J3F_5</Hit_accession> + <Hit_len>5070</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>4536</Hsp_hit-from> + <Hsp_hit-to>4544</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>8</Hsp_query-to> + <Hsp_hit-from>765</Hsp_hit-from> + <Hsp_hit-to>772</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCCGTC</Hsp_qseq> + <Hsp_hseq>CGTCCGTC</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>8</Hsp_query-to> + <Hsp_hit-from>769</Hsp_hit-from> + <Hsp_hit-to>776</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCCGTC</Hsp_qseq> + <Hsp_hseq>CGTCCGTC</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>8</Hsp_query-to> + <Hsp_hit-from>773</Hsp_hit-from> + <Hsp_hit-to>780</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCCGTC</Hsp_qseq> + <Hsp_hseq>CGTCCGTC</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>5</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>8</Hsp_query-to> + <Hsp_hit-from>777</Hsp_hit-from> + <Hsp_hit-to>784</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCCGTC</Hsp_qseq> + <Hsp_hseq>CGTCCGTC</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>6</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>3939</Hsp_hit-from> + <Hsp_hit-to>3946</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>GTGAAGAG</Hsp_qseq> + <Hsp_hseq>GTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>7</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>10</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>393</Hsp_hit-from> + <Hsp_hit-to>399</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TGAAGAG</Hsp_qseq> + <Hsp_hseq>TGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>8</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>3720</Hsp_hit-from> + <Hsp_hit-to>3726</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>33</Hit_num> + <Hit_id>gi|485601474|pdb|3J3E|5</Hit_id> + <Hit_def>Chain 5, Structure Of The D. Melanogaster 60s Rrna</Hit_def> + <Hit_accession>3J3E_5</Hit_accession> + <Hit_len>3970</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>3490</Hsp_hit-from> + <Hsp_hit-to>3498</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>2177</Hsp_hit-from> + <Hsp_hit-to>2184</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>GTGAAGAG</Hsp_qseq> + <Hsp_hseq>GTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2594</Hsp_hit-from> + <Hsp_hit-to>2600</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>7</Hsp_query-to> + <Hsp_hit-from>3627</Hsp_hit-from> + <Hsp_hit-to>3633</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>CGTCCGT</Hsp_qseq> + <Hsp_hseq>CGTCCGT</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>34</Hit_num> + <Hit_id>gi|449802187|pdb|3ZEX|B</Hit_id> + <Hit_def>Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome</Hit_def> + <Hit_accession>3ZEX_B</Hit_accession> + <Hit_len>1465</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>1334</Hsp_hit-from> + <Hsp_hit-to>1342</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>10</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>705</Hsp_hit-from> + <Hsp_hit-to>711</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TGAAGAG</Hsp_qseq> + <Hsp_hseq>TGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>35</Hit_num> + <Hit_id>gi|428697991|pdb|3J2L|1</Hit_id> + <Hit_def>Chain 1, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Rna)</Hit_def> + <Hit_accession>3J2L_1</Hit_accession> + <Hit_len>3049</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>13</Hsp_query-to> + <Hsp_hit-from>651</Hsp_hit-from> + <Hsp_hit-to>663</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>12</Hsp_identity> + <Hsp_positive>12</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>13</Hsp_align-len> + <Hsp_qseq>CGTCCGTCGTGAA</Hsp_qseq> + <Hsp_hseq>CGTCCGTCTTGAA</Hsp_hseq> + <Hsp_midline>|||||||| ||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2705</Hsp_hit-from> + <Hsp_hit-to>2713</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>36</Hit_num> + <Hit_id>gi|392311504|pdb|3OW2|0</Hit_id> + <Hit_def>Chain 0, Crystal Structure Of Enhanced Macrolide Bound To 50s Ribosomal Subunit</Hit_def> + <Hit_accession>3OW2_0</Hit_accession> + <Hit_len>2902</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2613</Hsp_hit-from> + <Hsp_hit-to>2621</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2594</Hsp_hit-from> + <Hsp_hit-to>2600</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>37</Hit_num> + <Hit_id>gi|374977932|pdb|4ADX|0</Hit_id> + <Hit_def>Chain 0, The Cryo-em Structure Of The Archaeal 50s Ribosomal Subunit In Complex With Initiation Factor 6</Hit_def> + <Hit_accession>4ADX_0</Hit_accession> + <Hit_len>2923</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>305</Hsp_hit-from> + <Hsp_hit-to>297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2625</Hsp_hit-from> + <Hsp_hit-to>2633</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2606</Hsp_hit-from> + <Hsp_hit-to>2612</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>38</Hit_num> + <Hit_id>gi|364506133|pdb|3U5F|6</Hit_id> + <Hit_def>Chain 6, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Ribosomal Rna And Ions Of The 40s Subunit, Ribosome B</Hit_def> + <Hit_accession>3U5F_6</Hit_accession> + <Hit_len>1800</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>3</Hsp_query-from> + <Hsp_query-to>11</Hsp_query-to> + <Hsp_hit-from>1528</Hsp_hit-from> + <Hsp_hit-to>1536</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCCGTCGTG</Hsp_qseq> + <Hsp_hseq>TCCGTCGTG</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>10</Hsp_query-to> + <Hsp_hit-from>1006</Hsp_hit-from> + <Hsp_hit-to>1012</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>CCGTCGT</Hsp_qseq> + <Hsp_hseq>CCGTCGT</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>10</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>1569</Hsp_hit-from> + <Hsp_hit-to>1563</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TGAAGAG</Hsp_qseq> + <Hsp_hseq>TGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>39</Hit_num> + <Hit_id>gi|364506095|pdb|3U5B|2</Hit_id> + <Hit_def>Chain 2, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Ribosomal Rna And Ions Of The 40s Subunit, Ribosome A >gi|558704782|pdb|4BYO|2 Chain 2, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex >gi|558704824|pdb|4BYV|2 Chain 2, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex</Hit_def> + <Hit_accession>3U5B_2</Hit_accession> + <Hit_len>1800</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>3</Hsp_query-from> + <Hsp_query-to>11</Hsp_query-to> + <Hsp_hit-from>1528</Hsp_hit-from> + <Hsp_hit-to>1536</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCCGTCGTG</Hsp_qseq> + <Hsp_hseq>TCCGTCGTG</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>10</Hsp_query-to> + <Hsp_hit-from>1006</Hsp_hit-from> + <Hsp_hit-to>1012</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>CCGTCGT</Hsp_qseq> + <Hsp_hseq>CCGTCGT</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>10</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>1569</Hsp_hit-from> + <Hsp_hit-to>1563</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TGAAGAG</Hsp_qseq> + <Hsp_hseq>TGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>40</Hit_num> + <Hit_id>gi|358440203|pdb|4A1D|1</Hit_id> + <Hit_def>Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 4.</Hit_def> + <Hit_accession>4A1D_1</Hit_accession> + <Hit_len>3119</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2280</Hsp_hit-from> + <Hsp_hit-to>2288</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2714</Hsp_hit-from> + <Hsp_hit-to>2722</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>14</Hsp_query-to> + <Hsp_hit-from>2838</Hsp_hit-from> + <Hsp_hit-to>2844</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>CGTGAAG</Hsp_qseq> + <Hsp_hseq>CGTGAAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>41</Hit_num> + <Hit_id>gi|358440111|pdb|4A18|1</Hit_id> + <Hit_def>Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 1</Hit_def> + <Hit_accession>4A18_1</Hit_accession> + <Hit_len>3354</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2513</Hsp_hit-from> + <Hsp_hit-to>2521</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2947</Hsp_hit-from> + <Hsp_hit-to>2955</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>14</Hsp_query-to> + <Hsp_hit-from>3071</Hsp_hit-from> + <Hsp_hit-to>3077</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>CGTGAAG</Hsp_qseq> + <Hsp_hseq>CGTGAAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>42</Hit_num> + <Hit_id>gi|358440157|pdb|4A1B|1</Hit_id> + <Hit_def>Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 3. >gi|359807703|pdb|4A19|1 Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 2.</Hit_def> + <Hit_accession>4A1B_1</Hit_accession> + <Hit_len>3354</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2513</Hsp_hit-from> + <Hsp_hit-to>2521</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2947</Hsp_hit-from> + <Hsp_hit-to>2955</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>14</Hsp_query-to> + <Hsp_hit-from>3071</Hsp_hit-from> + <Hsp_hit-to>3077</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>CGTGAAG</Hsp_qseq> + <Hsp_hseq>CGTGAAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>43</Hit_num> + <Hit_id>gi|357380452|pdb|3J0L|8</Hit_id> + <Hit_def>Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9.8a Cryo-Em Map: Classic Pre State 1</Hit_def> + <Hit_accession>3J0L_8</Hit_accession> + <Hit_len>20</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>3</Hsp_hit-from> + <Hsp_hit-to>11</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>44</Hit_num> + <Hit_id>gi|357380483|pdb|3J0O|8</Hit_id> + <Hit_def>Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9a Cryo-Em Map: Classic Pre State 2</Hit_def> + <Hit_accession>3J0O_8</Hit_accession> + <Hit_len>20</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>3</Hsp_hit-from> + <Hsp_hit-to>11</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>45</Hit_num> + <Hit_id>gi|315113523|pdb|3O58|1</Hit_id> + <Hit_def>Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The First 80s In The Asymmetric Unit. >gi|418837761|pdb|4B6B|5 Chain 5, Cryo-Em Structure Of The 60s Ribosomal Subunit In Complex With Arx1 And Rei1 >gi|597959861|pdb|3J64|1 Chain 1, Arx1 Pre-60s Particle. This Entry Contains The Rrna.</Hit_def> + <Hit_accession>3O58_1</Hit_accession> + <Hit_len>3396</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2959</Hsp_hit-from> + <Hsp_hit-to>2967</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>1634</Hsp_hit-from> + <Hsp_hit-to>1627</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTGAAGA</Hsp_qseq> + <Hsp_hseq>CGTGAAGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>2435</Hsp_hit-from> + <Hsp_hit-to>2442</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>GTGAAGAG</Hsp_qseq> + <Hsp_hseq>GTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>10</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>1100</Hsp_hit-from> + <Hsp_hit-to>1106</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TGAAGAG</Hsp_qseq> + <Hsp_hseq>TGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>5</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2216</Hsp_hit-from> + <Hsp_hit-to>2222</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>46</Hit_num> + <Hit_id>gi|315113568|pdb|3O5H|1</Hit_id> + <Hit_def>Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The Second 80s In The Asymmetric Unit. >gi|364506130|pdb|3U5D|1 Chain 1, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Ribosomal Rna And Ions Of The 60s Subunit, Ribosome A >gi|364506168|pdb|3U5H|5 Chain 5, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Ribosomal Rna And Ions Of The 60s Subunit, Ribosome B</Hit_def> + <Hit_accession>3O5H_1</Hit_accession> + <Hit_len>3396</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2959</Hsp_hit-from> + <Hsp_hit-to>2967</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>1634</Hsp_hit-from> + <Hsp_hit-to>1627</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTGAAGA</Hsp_qseq> + <Hsp_hseq>CGTGAAGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>2435</Hsp_hit-from> + <Hsp_hit-to>2442</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>GTGAAGAG</Hsp_qseq> + <Hsp_hseq>GTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>10</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>1100</Hsp_hit-from> + <Hsp_hit-to>1106</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TGAAGAG</Hsp_qseq> + <Hsp_hseq>TGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>5</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2216</Hsp_hit-from> + <Hsp_hit-to>2222</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>47</Hit_num> + <Hit_id>gi|315113447|pdb|3O2Z|1</Hit_id> + <Hit_def>Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The First 80s In The Asymmetric Unit.</Hit_def> + <Hit_accession>3O2Z_1</Hit_accession> + <Hit_len>1800</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>3</Hsp_query-from> + <Hsp_query-to>11</Hsp_query-to> + <Hsp_hit-from>1528</Hsp_hit-from> + <Hsp_hit-to>1536</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCCGTCGTG</Hsp_qseq> + <Hsp_hseq>TCCGTCGTG</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>10</Hsp_query-to> + <Hsp_hit-from>1006</Hsp_hit-from> + <Hsp_hit-to>1012</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>CCGTCGT</Hsp_qseq> + <Hsp_hseq>CCGTCGT</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>10</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>1569</Hsp_hit-from> + <Hsp_hit-to>1563</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TGAAGAG</Hsp_qseq> + <Hsp_hseq>TGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>48</Hit_num> + <Hit_id>gi|315113475|pdb|3O30|1</Hit_id> + <Hit_def>Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The Second 80s In The Asymmetric Unit.</Hit_def> + <Hit_accession>3O30_1</Hit_accession> + <Hit_len>1800</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>3</Hsp_query-from> + <Hsp_query-to>11</Hsp_query-to> + <Hsp_hit-from>1528</Hsp_hit-from> + <Hsp_hit-to>1536</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCCGTCGTG</Hsp_qseq> + <Hsp_hseq>TCCGTCGTG</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>10</Hsp_query-to> + <Hsp_hit-from>1006</Hsp_hit-from> + <Hsp_hit-to>1012</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>CCGTCGT</Hsp_qseq> + <Hsp_hseq>CCGTCGT</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>10</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>1569</Hsp_hit-from> + <Hsp_hit-to>1563</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TGAAGAG</Hsp_qseq> + <Hsp_hseq>TGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>49</Hit_num> + <Hit_id>gi|313103747|pdb|3IZF|A</Hit_id> + <Hit_def>Chain A, Model Of The Large Subunit Rna Based On A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome (With Es27l-In Conformation)</Hit_def> + <Hit_accession>3IZF_A</Hit_accession> + <Hit_len>3396</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2959</Hsp_hit-from> + <Hsp_hit-to>2967</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>1634</Hsp_hit-from> + <Hsp_hit-to>1627</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTGAAGA</Hsp_qseq> + <Hsp_hseq>CGTGAAGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>2435</Hsp_hit-from> + <Hsp_hit-to>2442</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>GTGAAGAG</Hsp_qseq> + <Hsp_hseq>GTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>10</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>1100</Hsp_hit-from> + <Hsp_hit-to>1106</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TGAAGAG</Hsp_qseq> + <Hsp_hseq>TGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>5</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2216</Hsp_hit-from> + <Hsp_hit-to>2222</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>50</Hit_num> + <Hit_id>gi|313103744|pdb|3IZE|A</Hit_id> + <Hit_def>Chain A, Model Of The Small Subunit Rna Based On A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome</Hit_def> + <Hit_accession>3IZE_A</Hit_accession> + <Hit_len>1800</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>3</Hsp_query-from> + <Hsp_query-to>11</Hsp_query-to> + <Hsp_hit-from>1528</Hsp_hit-from> + <Hsp_hit-to>1536</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCCGTCGTG</Hsp_qseq> + <Hsp_hseq>TCCGTCGTG</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>10</Hsp_query-to> + <Hsp_hit-from>1006</Hsp_hit-from> + <Hsp_hit-to>1012</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>CCGTCGT</Hsp_qseq> + <Hsp_hseq>CCGTCGT</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>10</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>1569</Hsp_hit-from> + <Hsp_hit-to>1563</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TGAAGAG</Hsp_qseq> + <Hsp_hseq>TGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>51</Hit_num> + <Hit_id>gi|296278448|pdb|3KO2|I</Hit_id> + <Hit_def>Chain I, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)</Hit_def> + <Hit_accession>3KO2_I</Hit_accession> + <Hit_len>24</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>19</Hsp_hit-from> + <Hsp_hit-to>11</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>52</Hit_num> + <Hit_id>gi|296278447|pdb|3KO2|H</Hit_id> + <Hit_def>Chain H, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)</Hit_def> + <Hit_accession>3KO2_H</Hit_accession> + <Hit_len>24</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>6</Hsp_hit-from> + <Hsp_hit-to>14</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>53</Hit_num> + <Hit_id>gi|296278444|pdb|3KO2|D</Hit_id> + <Hit_def>Chain D, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)</Hit_def> + <Hit_accession>3KO2_D</Hit_accession> + <Hit_len>24</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>19</Hsp_hit-from> + <Hsp_hit-to>11</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>54</Hit_num> + <Hit_id>gi|296278443|pdb|3KO2|C</Hit_id> + <Hit_def>Chain C, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c)</Hit_def> + <Hit_accession>3KO2_C</Hit_accession> + <Hit_len>24</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>6</Hsp_hit-from> + <Hsp_hit-to>14</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>55</Hit_num> + <Hit_id>gi|290790096|pdb|3I56|0</Hit_id> + <Hit_def>Chain 0, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The Large Ribosomal Subunit</Hit_def> + <Hit_accession>3I56_0</Hit_accession> + <Hit_len>2923</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>305</Hsp_hit-from> + <Hsp_hit-to>297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2625</Hsp_hit-from> + <Hsp_hit-to>2633</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2606</Hsp_hit-from> + <Hsp_hit-to>2612</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>56</Hit_num> + <Hit_id>gi|281500859|pdb|3JYX|5</Hit_id> + <Hit_def>Chain 5, Structure Of The 60s Rrna For Eukaryotic Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution</Hit_def> + <Hit_accession>3JYX_5</Hit_accession> + <Hit_len>3170</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2740</Hsp_hit-from> + <Hsp_hit-to>2748</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>1587</Hsp_hit-from> + <Hsp_hit-to>1580</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTGAAGA</Hsp_qseq> + <Hsp_hseq>CGTGAAGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>2222</Hsp_hit-from> + <Hsp_hit-to>2229</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>GTGAAGAG</Hsp_qseq> + <Hsp_hseq>GTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>1344</Hsp_hit-from> + <Hsp_hit-to>1350</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>5</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2003</Hsp_hit-from> + <Hsp_hit-to>2009</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>57</Hit_num> + <Hit_id>gi|281500807|pdb|3JYV|A</Hit_id> + <Hit_def>Chain A, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution</Hit_def> + <Hit_accession>3JYV_A</Hit_accession> + <Hit_len>1761</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>3</Hsp_query-from> + <Hsp_query-to>11</Hsp_query-to> + <Hsp_hit-from>1492</Hsp_hit-from> + <Hsp_hit-to>1500</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCCGTCGTG</Hsp_qseq> + <Hsp_hseq>TCCGTCGTG</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>10</Hsp_query-to> + <Hsp_hit-from>981</Hsp_hit-from> + <Hsp_hit-to>987</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>CCGTCGT</Hsp_qseq> + <Hsp_hseq>CCGTCGT</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>10</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>1533</Hsp_hit-from> + <Hsp_hit-to>1527</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TGAAGAG</Hsp_qseq> + <Hsp_hseq>TGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>58</Hit_num> + <Hit_id>gi|259090425|pdb|1S1I|3</Hit_id> + <Hit_def>Chain 3, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is In File 1s1h.</Hit_def> + <Hit_accession>1S1I_3</Hit_accession> + <Hit_len>2999</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2710</Hsp_hit-from> + <Hsp_hit-to>2718</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2691</Hsp_hit-from> + <Hsp_hit-to>2697</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>59</Hit_num> + <Hit_id>gi|208435493|pdb|2QEX|0</Hit_id> + <Hit_def>Chain 0, Negamycin Binds To The Wall Of The Nascent Chain Exit Tunnel Of The 50s Ribosomal Subunit</Hit_def> + <Hit_accession>2QEX_0</Hit_accession> + <Hit_len>2772</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2476</Hsp_hit-from> + <Hsp_hit-to>2484</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2457</Hsp_hit-from> + <Hsp_hit-to>2463</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>60</Hit_num> + <Hit_id>gi|194368703|pdb|3CPW|0</Hit_id> + <Hit_def>Chain 0, The Structure Of The Antibiotic Linezolid Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui</Hit_def> + <Hit_accession>3CPW_0</Hit_accession> + <Hit_len>2922</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2624</Hsp_hit-from> + <Hsp_hit-to>2632</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2605</Hsp_hit-from> + <Hsp_hit-to>2611</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>61</Hit_num> + <Hit_id>gi|188596372|pdb|3CCV|0</Hit_id> + <Hit_def>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2616a >gi|188596403|pdb|3CD6|0 Chain 0, Co-cystal Of Large Ribosomal Subunit Mutant G2616a With Cc-puromycin</Hit_def> + <Hit_accession>3CCV_0</Hit_accession> + <Hit_len>2923</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>305</Hsp_hit-from> + <Hsp_hit-to>297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2625</Hsp_hit-from> + <Hsp_hit-to>2633</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2606</Hsp_hit-from> + <Hsp_hit-to>2612</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>62</Hit_num> + <Hit_id>gi|188596341|pdb|3CCU|0</Hit_id> + <Hit_def>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482c</Hit_def> + <Hit_accession>3CCU_0</Hit_accession> + <Hit_len>2923</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>305</Hsp_hit-from> + <Hsp_hit-to>297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2625</Hsp_hit-from> + <Hsp_hit-to>2633</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2606</Hsp_hit-from> + <Hsp_hit-to>2612</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>63</Hit_num> + <Hit_id>gi|188596310|pdb|3CCS|0</Hit_id> + <Hit_def>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482a</Hit_def> + <Hit_accession>3CCS_0</Hit_accession> + <Hit_len>2923</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>305</Hsp_hit-from> + <Hsp_hit-to>297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2625</Hsp_hit-from> + <Hsp_hit-to>2633</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2606</Hsp_hit-from> + <Hsp_hit-to>2612</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>64</Hit_num> + <Hit_id>gi|188596279|pdb|3CCR|0</Hit_id> + <Hit_def>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488c. Density For Anisomycin Is Visible But Not Included In The Model.</Hit_def> + <Hit_accession>3CCR_0</Hit_accession> + <Hit_len>2923</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>305</Hsp_hit-from> + <Hsp_hit-to>297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2625</Hsp_hit-from> + <Hsp_hit-to>2633</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2606</Hsp_hit-from> + <Hsp_hit-to>2612</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>65</Hit_num> + <Hit_id>gi|188596248|pdb|3CCQ|0</Hit_id> + <Hit_def>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488u</Hit_def> + <Hit_accession>3CCQ_0</Hit_accession> + <Hit_len>2923</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>305</Hsp_hit-from> + <Hsp_hit-to>297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2625</Hsp_hit-from> + <Hsp_hit-to>2633</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2606</Hsp_hit-from> + <Hsp_hit-to>2612</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>66</Hit_num> + <Hit_id>gi|188596217|pdb|3CCM|0</Hit_id> + <Hit_def>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2611u</Hit_def> + <Hit_accession>3CCM_0</Hit_accession> + <Hit_len>2923</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>305</Hsp_hit-from> + <Hsp_hit-to>297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2625</Hsp_hit-from> + <Hsp_hit-to>2633</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>67</Hit_num> + <Hit_id>gi|188596186|pdb|3CCL|0</Hit_id> + <Hit_def>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535c. Density For Anisomycin Is Visible But Not Included In Model.</Hit_def> + <Hit_accession>3CCL_0</Hit_accession> + <Hit_len>2923</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>305</Hsp_hit-from> + <Hsp_hit-to>297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2625</Hsp_hit-from> + <Hsp_hit-to>2633</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2606</Hsp_hit-from> + <Hsp_hit-to>2612</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>68</Hit_num> + <Hit_id>gi|188596155|pdb|3CCJ|0</Hit_id> + <Hit_def>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2534u</Hit_def> + <Hit_accession>3CCJ_0</Hit_accession> + <Hit_len>2923</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>305</Hsp_hit-from> + <Hsp_hit-to>297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2625</Hsp_hit-from> + <Hsp_hit-to>2633</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2606</Hsp_hit-from> + <Hsp_hit-to>2612</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>69</Hit_num> + <Hit_id>gi|188596124|pdb|3CCE|0</Hit_id> + <Hit_def>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535a</Hit_def> + <Hit_accession>3CCE_0</Hit_accession> + <Hit_len>2923</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>305</Hsp_hit-from> + <Hsp_hit-to>297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2625</Hsp_hit-from> + <Hsp_hit-to>2633</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2606</Hsp_hit-from> + <Hsp_hit-to>2612</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>70</Hit_num> + <Hit_id>gi|188596093|pdb|3CC7|0</Hit_id> + <Hit_def>Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2487u</Hit_def> + <Hit_accession>3CC7_0</Hit_accession> + <Hit_len>2923</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>305</Hsp_hit-from> + <Hsp_hit-to>297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2625</Hsp_hit-from> + <Hsp_hit-to>2633</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2606</Hsp_hit-from> + <Hsp_hit-to>2612</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>71</Hit_num> + <Hit_id>gi|188596031|pdb|3CC2|0</Hit_id> + <Hit_def>Chain 0, The Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution With Rrna Sequence For The 23s Rrna And Genome-Derived Sequences For R-Proteins >gi|188596062|pdb|3CC4|0 Chain 0, Co-Crystal Structure Of Anisomycin Bound To The 50s Ribosomal Subunit >gi|206581937|pdb|3CMA|0 Chain 0, The Structure Of Cca And Cca-Phe-Cap-Bio Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui >gi|206581970|pdb|3CME|0 Chain 0, The Structure Of Ca And Cca-Phe-Cap-Bio Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui >gi|228312141|pdb|3G4S|0 Chain 0, Co-Crystal Structure Of Tiamulin Bound To The Large Ribosomal Subunit >gi|228312197|pdb|3G6E|0 Chain 0, Co-Crystal Structure Of Homoharringtonine Bound To The Large Ribosomal Subunit >gi|228312233|pdb|3G71|0 Chain 0, Co-crystal Structure Of Bruceantin Bound To The Large Ribosomal Subunit >gi|290790035|pdb|3I55|0 Chain 0, Co-Crystal Structure Of Mycalamide A Bound To The Large Ribosomal Subunit</Hit_def> + <Hit_accession>3CC2_0</Hit_accession> + <Hit_len>2923</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>305</Hsp_hit-from> + <Hsp_hit-to>297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2625</Hsp_hit-from> + <Hsp_hit-to>2633</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2606</Hsp_hit-from> + <Hsp_hit-to>2612</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>72</Hit_num> + <Hit_id>gi|187609272|pdb|2ZKR|0</Hit_id> + <Hit_def>Chain 0, Structure Of A Mammalian Ribosomal 60s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map</Hit_def> + <Hit_accession>2ZKR_0</Hit_accession> + <Hit_len>2903</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2623</Hsp_hit-from> + <Hsp_hit-to>2631</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>2111</Hsp_hit-from> + <Hsp_hit-to>2118</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>GTGAAGAG</Hsp_qseq> + <Hsp_hseq>GTGAAGAG</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>10</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>353</Hsp_hit-from> + <Hsp_hit-to>359</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TGAAGAG</Hsp_qseq> + <Hsp_hseq>TGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>1892</Hsp_hit-from> + <Hsp_hit-to>1898</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>73</Hit_num> + <Hit_id>gi|171848835|pdb|2QA4|0</Hit_id> + <Hit_def>Chain 0, A More Complete Structure Of The The L7L12 STALK OF THE Haloarcula Marismortui 50s Large Ribosomal Subunit</Hit_def> + <Hit_accession>2QA4_0</Hit_accession> + <Hit_len>2922</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2624</Hsp_hit-from> + <Hsp_hit-to>2632</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2605</Hsp_hit-from> + <Hsp_hit-to>2611</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>74</Hit_num> + <Hit_id>gi|99032306|pdb|2FTC|R</Hit_id> + <Hit_def>Chain R, Structural Model For The Large Subunit Of The Mammalian Mitochondrial Ribosome</Hit_def> + <Hit_accession>2FTC_R</Hit_accession> + <Hit_len>1568</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>1032</Hsp_hit-from> + <Hsp_hit-to>1040</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CGTGAAGAG</Hsp_qseq> + <Hsp_hseq>CGTGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>75</Hit_num> + <Hit_id>gi|50513468|pdb|1S72|0</Hit_id> + <Hit_def>Chain 0, Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution >gi|83753123|pdb|1VQ4|0 Chain 0, The Structure Of The Transition State Analogue "daa" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui >gi|83753155|pdb|1VQ5|0 Chain 0, The Structure Of The Transition State Analogue "raa" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui >gi|83753187|pdb|1VQ6|0 Chain 0, The Structure Of C-Hpmn And Cca-Phe-Cap-Bio Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui >gi|83753219|pdb|1VQ7|0 Chain 0, The Structure Of The Transition State Analogue "dca" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui >gi|83753251|pdb|1VQ8|0 Chain 0, The Structure Of Ccda-Phe-Cap-Bio And The Antibiotic Sparsomycin Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui >gi|83753282|pdb|1VQ9|0 Chain 0, The Structure Of Cca-Phe-Cap-Bio And The Antibiotic Sparsomycin Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui >gi|83753314|pdb|1VQK|0 Chain 0, The Structure Of Ccda-Phe-Cap-Bio Bound To The A Site Of The Ribosomal Subunit Of Haloarcula Marismortui >gi|83753345|pdb|1VQL|0 Chain 0, The Structure Of The Transition State Analogue "dcsn" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui >gi|83753376|pdb|1VQM|0 Chain 0, The Structure Of The Transition State Analogue "dan" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui >gi|83753407|pdb|1VQN|0 Chain 0, The Structure Of Cc-hpmn And Cca-phe-cap-bio Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui >gi|83753439|pdb|1VQO|0 Chain 0, The Structure Of Ccpmn Bound To The Large Ribosomal Subunit Haloarcula Marismortui >gi|83753470|pdb|1VQP|0 Chain 0, The Structure Of The Transition State Analogue "rap" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui >gi|145580171|pdb|2OTJ|0 Chain 0, 13-Deoxytedanolide Bound To The Large Subunit Of Haloarcula Marismortui >gi|145580202|pdb|2OTL|0 Chain 0, Girodazole Bound To The Large Subunit Of Haloarcula Marismortui</Hit_def> + <Hit_accession>1S72_0</Hit_accession> + <Hit_len>2922</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2624</Hsp_hit-from> + <Hsp_hit-to>2632</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2605</Hsp_hit-from> + <Hsp_hit-to>2611</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>76</Hit_num> + <Hit_id>gi|66360881|pdb|1YIT|0</Hit_id> + <Hit_def>Chain 0, Crystal Structure Of Virginiamycin M And S Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui >gi|66360914|pdb|1YJ9|0 Chain 0, Crystal Structure Of The Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui Containing A Three Residue Deletion In L22</Hit_def> + <Hit_accession>1YIT_0</Hit_accession> + <Hit_len>2922</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>305</Hsp_hit-from> + <Hsp_hit-to>297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2625</Hsp_hit-from> + <Hsp_hit-to>2633</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2606</Hsp_hit-from> + <Hsp_hit-to>2612</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>77</Hit_num> + <Hit_id>gi|66360782|pdb|1YHQ|0</Hit_id> + <Hit_def>Chain 0, Crystal Structure Of Azithromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui >gi|66360815|pdb|1YI2|0 Chain 0, Crystal Structure Of Erythromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui >gi|66360848|pdb|1YIJ|0 Chain 0, Crystal Structure Of Telithromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui >gi|66360947|pdb|1YJN|0 Chain 0, Crystal Structure Of Clindamycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui</Hit_def> + <Hit_accession>1YHQ_0</Hit_accession> + <Hit_len>2922</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>305</Hsp_hit-from> + <Hsp_hit-to>297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2625</Hsp_hit-from> + <Hsp_hit-to>2633</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2606</Hsp_hit-from> + <Hsp_hit-to>2612</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>78</Hit_num> + <Hit_id>gi|66360980|pdb|1YJW|0</Hit_id> + <Hit_def>Chain 0, Crystal Structure Of Quinupristin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui</Hit_def> + <Hit_accession>1YJW_0</Hit_accession> + <Hit_len>2922</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>305</Hsp_hit-from> + <Hsp_hit-to>297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>TCGTGAAGA</Hsp_qseq> + <Hsp_hseq>TCGTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2625</Hsp_hit-from> + <Hsp_hit-to>2633</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2606</Hsp_hit-from> + <Hsp_hit-to>2612</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>79</Hit_num> + <Hit_id>gi|37928006|pdb|1Q86|A</Hit_id> + <Hit_def>Chain A, Crystal Structure Of Cca-Phe-Cap-Biotin Bound Simultaneously At Half Occupancy To Both The A-Site And P- Site Of The The 50s Ribosomal Subunit.</Hit_def> + <Hit_accession>1Q86_A</Hit_accession> + <Hit_len>2922</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2624</Hsp_hit-from> + <Hsp_hit-to>2632</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2605</Hsp_hit-from> + <Hsp_hit-to>2611</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>80</Hit_num> + <Hit_id>gi|15825941|pdb|1JJ2|0</Hit_id> + <Hit_def>Chain 0, Fully Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution >gi|20150986|pdb|1KQS|0 Chain 0, The Haloarcula Marismortui 50s Complexed With A Pretranslocational Intermediate In Protein Synthesis >gi|22219324|pdb|1M1K|A Chain A, Co-Crystal Structure Of Azithromycin Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui >gi|24159019|pdb|1M90|A Chain A, Co-Crystal Structure Of Cca-Phe-Caproic Acid-Biotin And Sparsomycin Bound To The 50s Ribosomal Subunit >gi|34811116|pdb|1K73|A Chain A, Co-Crystal Structure Of Anisomycin Bound To The 50s Ribosomal Subunit >gi|34811185|pdb|1N8R|A Chain A, Structure Of Large Ribosomal Subunit In Complex With Virginiamycin M >gi|34811215|pdb|1NJI|A Chain A, Structure Of Chloramphenicol Bound To The 50s Ribosomal Subunit >gi|37927899|pdb|1Q7Y|A Chain A, Crystal Structure Of Ccdap-puromycin Bound At The Peptidyl Transferase Center Of The 50s Ribosomal Subunit >gi|37927934|pdb|1Q81|A Chain A, Crystal Structure Of Minihelix With 3' Puromycin Bound To A- Site Of The 50s Ribosomal Subunit. >gi|37927970|pdb|1Q82|A Chain A, Crystal Structure Of Cc-Puromycin Bound To The A-Site Of The 50s Ribosomal Subunit >gi|39654670|pdb|1QVF|0 Chain 0, Structure Of A Deacylated Trna Minihelix Bound To The E Site Of The Large Ribosomal Subunit Of Haloarcula Marismortui >gi|39654701|pdb|1QVG|0 Chain 0, Structure Of Cca Oligonucleotide Bound To The Trna Binding Sites Of The Large Ribosomal Subunit Of Haloarcula Marismortui >gi|157878615|pdb|1K8A|A Chain A, Co-Crystal Structure Of Carbomycin A Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui >gi|157878625|pdb|1K9M|A Chain A, Co-Crystal Structure Of Tylosin Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui >gi|157878639|pdb|1KD1|A Chain A, Co-crystal Structure Of Spiramycin Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui >gi|157880605|pdb|1W2B|0 Chain 0, Trigger Factor Ribosome Binding Domain In Complex With 50s >gi|228311909|pdb|3CXC|0 Chain 0, The Structure Of An Enhanced Oxazolidinone Inhibitor Bound To The 50s Ribosomal Subunit Of H. Marismortui</Hit_def> + <Hit_accession>1JJ2_0</Hit_accession> + <Hit_len>2922</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2624</Hsp_hit-from> + <Hsp_hit-to>2632</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2605</Hsp_hit-from> + <Hsp_hit-to>2611</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>81</Hit_num> + <Hit_id>gi|34811146|pdb|1KC8|A</Hit_id> + <Hit_def>Chain A, Co-Crystal Structure Of Blasticidin S Bound To The 50s Ribosomal Subunit</Hit_def> + <Hit_accession>1KC8_A</Hit_accession> + <Hit_len>2922</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2624</Hsp_hit-from> + <Hsp_hit-to>2632</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2605</Hsp_hit-from> + <Hsp_hit-to>2611</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>82</Hit_num> + <Hit_id>gi|10120918|pdb|1FFK|0</Hit_id> + <Hit_def>Chain 0, Crystal Structure Of The Large Ribosomal Subunit From Haloarcula Marismortui At 2.4 Angstrom Resolution</Hit_def> + <Hit_accession>1FFK_0</Hit_accession> + <Hit_len>2922</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2624</Hsp_hit-from> + <Hsp_hit-to>2632</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2605</Hsp_hit-from> + <Hsp_hit-to>2611</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>83</Hit_num> + <Hit_id>gi|10120728|pdb|1FG0|A</Hit_id> + <Hit_def>Chain A, Large Ribosomal Subunit Complexed With A 13 Bp Minihelix- Puromycin Compound</Hit_def> + <Hit_accession>1FG0_A</Hit_accession> + <Hit_len>602</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>563</Hsp_hit-from> + <Hsp_hit-to>571</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>544</Hsp_hit-from> + <Hsp_hit-to>550</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>84</Hit_num> + <Hit_id>gi|10120727|pdb|1FFZ|A</Hit_id> + <Hit_def>Chain A, Large Ribosomal Subunit Complexed With R(Cc)-Da-Puromycin</Hit_def> + <Hit_accession>1FFZ_A</Hit_accession> + <Hit_len>602</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>18.3341</Hsp_bit-score> + <Hsp_score>9</Hsp_score> + <Hsp_evalue>11.9013</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>563</Hsp_hit-from> + <Hsp_hit-to>571</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>9</Hsp_identity> + <Hsp_positive>9</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>9</Hsp_align-len> + <Hsp_qseq>CCGTCGTGA</Hsp_qseq> + <Hsp_hseq>CCGTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>6</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>544</Hsp_hit-from> + <Hsp_hit-to>550</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTCGTGA</Hsp_qseq> + <Hsp_hseq>GTCGTGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>85</Hit_num> + <Hit_id>gi|558705015|pdb|4LGT|F</Hit_id> + <Hit_def>Chain F, Crystal Structure Of The Catalytic Domain Of Rlub In Complex With A 21-nucleotide Rna Substrate</Hit_def> + <Hit_accession>4LGT_F</Hit_accession> + <Hit_len>21</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>5</Hsp_hit-from> + <Hsp_hit-to>12</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>86</Hit_num> + <Hit_id>gi|558705013|pdb|4LGT|E</Hit_id> + <Hit_def>Chain E, Crystal Structure Of The Catalytic Domain Of Rlub In Complex With A 21-nucleotide Rna Substrate</Hit_def> + <Hit_accession>4LGT_E</Hit_accession> + <Hit_len>21</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>5</Hsp_hit-from> + <Hsp_hit-to>12</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>87</Hit_num> + <Hit_id>gi|529280935|pdb|4BTD|A</Hit_id> + <Hit_def>Chain A, Thermus Thermophilus Ribosome</Hit_def> + <Hit_accession>4BTD_A</Hit_accession> + <Hit_len>2915</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2048</Hsp_hit-from> + <Hsp_hit-to>2055</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTGAAGA</Hsp_qseq> + <Hsp_hseq>CGTGAAGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2603</Hsp_hit-from> + <Hsp_hit-to>2610</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>88</Hit_num> + <Hit_id>gi|528082310|pdb|4L6J|A</Hit_id> + <Hit_def>Chain A, Crystal Structure Of Blasticidin S Bound To Thermus Thermophilus 70s Ribosome. This File Contains The 50s Subunit And Blasticidin S Molecule From The First 70s Ribosome. >gi|528082364|pdb|4L6L|A Chain A, Crystal Structure Of Blasticidin S Bound To Thermus Thermophilus 70s Ribosome. This File Contains The 50s Subunit And Blasticidin S Molecule From The Second 70s Ribosome</Hit_def> + <Hit_accession>4L6J_A</Hit_accession> + <Hit_len>2879</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2021</Hsp_hit-from> + <Hsp_hit-to>2028</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTGAAGA</Hsp_qseq> + <Hsp_hseq>CGTGAAGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2576</Hsp_hit-from> + <Hsp_hit-to>2583</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>89</Hit_num> + <Hit_id>gi|520729408|pdb|4KFI|A</Hit_id> + <Hit_def>Chain A, Crystal Structure Of The 70s Ribosome Bound With The Q253p Mutant Of Release Factor Rf2. 50s Of The A Subunit >gi|520729463|pdb|4KFL|A Chain A, Crystal Structure Of The 70s Ribosome Bound With The Q253p Mutant Of Release Factor Rf2. 50s Of The B Subunit</Hit_def> + <Hit_accession>4KFI_A</Hit_accession> + <Hit_len>2879</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2021</Hsp_hit-from> + <Hsp_hit-to>2028</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTGAAGA</Hsp_qseq> + <Hsp_hseq>CGTGAAGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2576</Hsp_hit-from> + <Hsp_hit-to>2583</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>90</Hit_num> + <Hit_id>gi|520728860|pdb|4K0Q|A</Hit_id> + <Hit_def>Chain A, Crystal Structure Of Thermus Thermophilus 70s Containing Trnas And Mrna Stop Codon With Pseudouridine</Hit_def> + <Hit_accession>4K0Q_A</Hit_accession> + <Hit_len>2915</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2048</Hsp_hit-from> + <Hsp_hit-to>2055</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTGAAGA</Hsp_qseq> + <Hsp_hseq>CGTGAAGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2603</Hsp_hit-from> + <Hsp_hit-to>2610</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>91</Hit_num> + <Hit_id>gi|520728802|pdb|4K0M|A</Hit_id> + <Hit_def>Chain A, Crystal Structure Of Thermus Thermophilus 70s Containing Trnas And Mrna Stop Codon With Pseudouridine</Hit_def> + <Hit_accession>4K0M_A</Hit_accession> + <Hit_len>2915</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2048</Hsp_hit-from> + <Hsp_hit-to>2055</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTGAAGA</Hsp_qseq> + <Hsp_hseq>CGTGAAGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2603</Hsp_hit-from> + <Hsp_hit-to>2610</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>92</Hit_num> + <Hit_id>gi|512125286|pdb|3J3V|A</Hit_id> + <Hit_def>Chain A, Atomic Model Of The Immature 50s Subunit From Bacillus Subtilis (state I-a)</Hit_def> + <Hit_accession>3J3V_A</Hit_accession> + <Hit_len>2927</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2620</Hsp_hit-from> + <Hsp_hit-to>2627</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>10</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>340</Hsp_hit-from> + <Hsp_hit-to>346</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TGAAGAG</Hsp_qseq> + <Hsp_hseq>TGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>3</Hsp_query-from> + <Hsp_query-to>9</Hsp_query-to> + <Hsp_hit-from>440</Hsp_hit-from> + <Hsp_hit-to>446</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCCGTCG</Hsp_qseq> + <Hsp_hseq>TCCGTCG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2056</Hsp_hit-from> + <Hsp_hit-to>2062</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>5</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>3</Hsp_query-from> + <Hsp_query-to>9</Hsp_query-to> + <Hsp_hit-from>2644</Hsp_hit-from> + <Hsp_hit-to>2650</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCCGTCG</Hsp_qseq> + <Hsp_hseq>TCCGTCG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>93</Hit_num> + <Hit_id>gi|512125306|pdb|3J3W|A</Hit_id> + <Hit_def>Chain A, Atomic Model Of The Immature 50s Subunit From Bacillus Subtilis (state Ii-a)</Hit_def> + <Hit_accession>3J3W_A</Hit_accession> + <Hit_len>2927</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2620</Hsp_hit-from> + <Hsp_hit-to>2627</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>10</Hsp_query-from> + <Hsp_query-to>16</Hsp_query-to> + <Hsp_hit-from>340</Hsp_hit-from> + <Hsp_hit-to>346</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TGAAGAG</Hsp_qseq> + <Hsp_hseq>TGAAGAG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>3</Hsp_query-from> + <Hsp_query-to>9</Hsp_query-to> + <Hsp_hit-from>440</Hsp_hit-from> + <Hsp_hit-to>446</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCCGTCG</Hsp_qseq> + <Hsp_hseq>TCCGTCG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>9</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2056</Hsp_hit-from> + <Hsp_hit-to>2062</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>GTGAAGA</Hsp_qseq> + <Hsp_hseq>GTGAAGA</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>5</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>3</Hsp_query-from> + <Hsp_query-to>9</Hsp_query-to> + <Hsp_hit-from>2644</Hsp_hit-from> + <Hsp_hit-to>2650</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>TCCGTCG</Hsp_qseq> + <Hsp_hseq>TCCGTCG</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>94</Hit_num> + <Hit_id>gi|482676744|pdb|3V6X|A</Hit_id> + <Hit_def>Chain A, Crystal Structure Of The Bacterial Ribosome Ram Mutation G347u. This Entry Contains The 50s Ribosomal Subunit Of The Second 70s Molecule In The Asymmetric Unit</Hit_def> + <Hit_accession>3V6X_A</Hit_accession> + <Hit_len>2916</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2048</Hsp_hit-from> + <Hsp_hit-to>2055</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTGAAGA</Hsp_qseq> + <Hsp_hseq>CGTGAAGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2603</Hsp_hit-from> + <Hsp_hit-to>2610</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>95</Hit_num> + <Hit_id>gi|482676712|pdb|3V6W|A</Hit_id> + <Hit_def>Chain A, Crystal Structure Of The Bacterial Ribosome Ram Mutation G347u. This Entry Contains The 50s Ribosomal Subunit Of The First 70s Molecule In The Asymmetric Unit</Hit_def> + <Hit_accession>3V6W_A</Hit_accession> + <Hit_len>2916</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>2048</Hsp_hit-from> + <Hsp_hit-to>2055</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTGAAGA</Hsp_qseq> + <Hsp_hseq>CGTGAAGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2603</Hsp_hit-from> + <Hsp_hit-to>2610</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>96</Hit_num> + <Hit_id>gi|428697829|pdb|2YMI|DD</Hit_id> + <Hit_def>Chain d, The Cryo-Em Structure Of A 3d Dna-Origami Object</Hit_def> + <Hit_accession>2YMI_DD</Hit_accession> + <Hit_len>56</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>52</Hsp_hit-from> + <Hsp_hit-to>45</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>97</Hit_num> + <Hit_id>gi|428697789|pdb|2YMF|A</Hit_id> + <Hit_def>Chain A, The Cryo-Em Structure Of A 3d Dna-Origami Object</Hit_def> + <Hit_accession>2YMF_A</Hit_accession> + <Hit_len>4896</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>575</Hsp_hit-from> + <Hsp_hit-to>582</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>14.3694</Hsp_bit-score> + <Hsp_score>7</Hsp_score> + <Hsp_evalue>185.82</Hsp_evalue> + <Hsp_query-from>4</Hsp_query-from> + <Hsp_query-to>10</Hsp_query-to> + <Hsp_hit-from>561</Hsp_hit-from> + <Hsp_hit-to>567</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>7</Hsp_identity> + <Hsp_positive>7</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>7</Hsp_align-len> + <Hsp_qseq>CCGTCGT</Hsp_qseq> + <Hsp_hseq>CCGTCGT</Hsp_hseq> + <Hsp_midline>|||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>98</Hit_num> + <Hit_id>gi|396639330|pdb|2J01|A</Hit_id> + <Hit_def>Chain A, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4). This File Contains The 50s Subunit From Molecule I. >gi|396639355|pdb|2J03|A Chain A, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 4 Of 4). This File Contains The 50s Subunit From Molecule Ii.</Hit_def> + <Hit_accession>2J01_A</Hit_accession> + <Hit_len>2787</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>15</Hsp_query-to> + <Hsp_hit-from>1948</Hsp_hit-from> + <Hsp_hit-to>1955</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTGAAGA</Hsp_qseq> + <Hsp_hseq>CGTGAAGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>2474</Hsp_hit-from> + <Hsp_hit-to>2481</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>99</Hit_num> + <Hit_id>gi|393715375|pdb|4AQX|C</Hit_id> + <Hit_def>Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Magnesium</Hit_def> + <Hit_accession>4AQX_C</Hit_accession> + <Hit_len>14</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>7</Hsp_hit-from> + <Hsp_hit-to>14</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>100</Hit_num> + <Hit_id>gi|393715371|pdb|4AQU|C</Hit_id> + <Hit_def>Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Calcium</Hit_def> + <Hit_accession>4AQU_C</Hit_accession> + <Hit_len>24</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>16.3517</Hsp_bit-score> + <Hsp_score>8</Hsp_score> + <Hsp_evalue>47.0266</Hsp_evalue> + <Hsp_query-from>5</Hsp_query-from> + <Hsp_query-to>12</Hsp_query-to> + <Hsp_hit-from>7</Hsp_hit-from> + <Hsp_hit-to>14</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>8</Hsp_identity> + <Hsp_positive>8</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>8</Hsp_align-len> + <Hsp_qseq>CGTCGTGA</Hsp_qseq> + <Hsp_hseq>CGTCGTGA</Hsp_hseq> + <Hsp_midline>||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +</Iteration_hits> + <Iteration_stat> + <Statistics> + <Statistics_db-num>8975</Statistics_db-num> + <Statistics_db-len>885284</Statistics_db-len> + <Statistics_hsp-len>0</Statistics_hsp-len> + <Statistics_eff-space>0</Statistics_eff-space> + <Statistics_kappa>0.710602795216363</Statistics_kappa> + <Statistics_lambda>1.37406312246009</Statistics_lambda> + <Statistics_entropy>1.30724660390929</Statistics_entropy> + </Statistics> + </Iteration_stat> +</Iteration> +</BlastOutput_iterations> +</BlastOutput> +