Mercurial > repos > jankanis > blast2html
view blast2html.xml @ 51:b15a20c2372a
fix python 2 compatibility
author | Jan Kanis <jan.code@jankanis.nl> |
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date | Wed, 21 May 2014 18:34:35 +0200 |
parents | 7d3f399d0d98 |
children | d6c7b5de2833 |
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<tool id="blast2html" name="blast2html" version="0.0.7"> <description>Convert BLAST XML to HTML</description> <requirements> <requirement type="package" version="v0.0.18">blast_datatypes</requirement> <requirement name="package" version="1.3.0">six</requirement> <requirement name="package" version="1.2.1">argparse</requirement> <requirement name="package" version="2.2.3">lxml</requirement> <requirement name="package" version="2.7.2">jinja2</requirement> </requirements> <command interpreter="python">blast2html.py -i "${input}" -o "${output}"</command> <stdio> <!-- Any exit code other than 0 is an error --> <exit_code range="1:" /> <exit_code range=":-1" /> </stdio> <inputs> <param format="blast" name="input" type="data" label="Source file"/> </inputs> <outputs> <data format="html" name="output" /> </outputs> <tests> <test> <param name="input" value="blast xml example1.xml"/> <output name="out_file1" file="blast xml example1.html"/> </test> <test> <param name="input" value="blast xml example2.xml"/> <output name="out_file1" file="blast xml example2.html"/> </test> <test> <param name="input" value="blast xml example3.xml"/> <output name="out_file1" file="blast xml example3.html"/> </test> <test> <param name="input" value="blast xml example4.xml"/> <output name="out_file1" file="blast xml example4.html"/> </test> </tests> <help> This tool converts the default BLAST XML result into a HTML document </help> </tool>