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create document-wide h1 header, put other headers one size down
Wed, 09 Jul 2014 15:17:58 +0200, by Jan Kanis
create document-wide h1 header, put other headers one size down
Wed, 09 Jul 2014 15:17:14 +0200, by Jan Kanis
report query parameters for each query
Wed, 09 Jul 2014 15:04:37 +0200, by Jan Kanis
fix (again) output encoding
Tue, 08 Jul 2014 17:51:22 +0200, by Jan Kanis
update version to 0.0.12
Tue, 08 Jul 2014 17:05:54 +0200, by Jan Kanis
minor fix
Mon, 07 Jul 2014 12:20:28 +0200, by Jan Kanis
add new test files
Mon, 07 Jul 2014 11:50:50 +0200, by Jan Kanis
update test
Mon, 07 Jul 2014 11:42:43 +0200, by Jan Kanis
stream output
Mon, 07 Jul 2014 11:29:10 +0200, by Jan Kanis
improve warning messages
Tue, 01 Jul 2014 17:18:09 +0200, by Jan Kanis
fix error
Tue, 01 Jul 2014 16:54:32 +0200, by Jan Kanis
better warning message
Tue, 01 Jul 2014 16:51:38 +0200, by Jan Kanis
add --db-config-dir switch to wrapper; update version number
Tue, 01 Jul 2014 16:23:29 +0200, by Jan Kanis
look at all blast*.loc files; python2.6 compat fix
Tue, 01 Jul 2014 16:00:29 +0200, by Jan Kanis
test new command line parameters, fix small bug
Mon, 30 Jun 2014 17:51:56 +0200, by Jan Kanis
update tests
Mon, 30 Jun 2014 17:31:26 +0200, by Jan Kanis
fix bug; add comments
Mon, 30 Jun 2014 17:31:10 +0200, by Jan Kanis
implement configurable gene bank links
Mon, 30 Jun 2014 16:49:45 +0200, by Jan Kanis
Backed out broken changeset 15b289ffdf2b
Tue, 24 Jun 2014 18:51:26 +0200, by Jan Kanis
try to install lxml within setup_virtualenv (probably fails)
Tue, 24 Jun 2014 18:25:00 +0200, by Jan Kanis
update to latest zlib, remove workaround for missing zlib env variable
Tue, 24 Jun 2014 18:12:19 +0200, by Jan Kanis
fix LD_LIBRARY_PATH
Tue, 24 Jun 2014 17:59:12 +0200, by Jan Kanis
add LIBRARY_PATH variable
Tue, 24 Jun 2014 17:13:41 +0200, by Jan Kanis
add zlib dependency
Tue, 24 Jun 2014 17:07:46 +0200, by Jan Kanis
merge py2.6 branch
Tue, 24 Jun 2014 16:49:05 +0200, by Jan Kanis
(attempt to) get lxml install working py2.6
Tue, 24 Jun 2014 16:46:18 +0200, by Jan Kanis
add missing dependencies py2.6
Tue, 24 Jun 2014 11:20:24 +0200, by Jan Kanis
re-include backed out revisions and update version numbers py2.6
Tue, 24 Jun 2014 11:14:52 +0200, by Jan Kanis
Backed out changesets 0b5819dc1478 and 3338571b44cd to create new release version
Tue, 24 Jun 2014 11:00:57 +0200, by Jan Kanis
fix lxml version
Mon, 23 Jun 2014 17:46:26 +0200, by Jan Kanis
first attempt at running on python 2.6
Mon, 23 Jun 2014 17:11:58 +0200, by Jan Kanis
merge py2.6 branch
Thu, 19 Jun 2014 17:00:29 +0200, by Jan Kanis
Close branch py2.6
Thu, 19 Jun 2014 16:59:58 +0200, by Jan Kanis
remove unneeded encoding parameter py2.6
Thu, 19 Jun 2014 16:43:22 +0200, by Jan Kanis
comment py2.6
Thu, 19 Jun 2014 16:29:33 +0200, by Jan Kanis
update test output py2.6
Thu, 19 Jun 2014 14:17:09 +0200, by Jan Kanis
Format all numbers in a predictable way py2.6
Thu, 19 Jun 2014 14:07:00 +0200, by Jan Kanis
Fix rounding errors py2.6
Wed, 18 Jun 2014 17:50:32 +0200, by Jan Kanis
fix escaping of javascript literals py2.6
Wed, 18 Jun 2014 16:58:25 +0200, by Jan Kanis
First go at 2.6 compatibility py2.6
Wed, 18 Jun 2014 16:21:45 +0200, by Jan Kanis
doc changes
Wed, 18 Jun 2014 14:33:12 +0200, by Jan Kanis
refactor
Wed, 18 Jun 2014 14:23:15 +0200, by Jan Kanis
Modify test data to include a negative frame sequence that is split in multiple lines
Wed, 18 Jun 2014 14:22:57 +0200, by Jan Kanis
handle reverse matches
Wed, 18 Jun 2014 14:12:00 +0200, by Jan Kanis
fix bug in calculations of alignment end
Wed, 18 Jun 2014 12:25:37 +0200, by Jan Kanis
wrap alignments if they are too long
Tue, 17 Jun 2014 18:07:02 +0200, by Jan Kanis
fix input format
Wed, 04 Jun 2014 16:28:45 +0200, by Jan Kanis
depend on modified libxml2 that exports LD_LIBRARY_PATH
Wed, 04 Jun 2014 16:03:12 +0200, by Jan Kanis
work around missing ld library path for libxml
Tue, 03 Jun 2014 16:12:50 +0200, by Jan Kanis
depend on fixed python3
Wed, 28 May 2014 16:55:11 +0200, by Jan Kanis
Undo including $ENV[PYTHONPATH] in PYTHONPATH
Wed, 28 May 2014 14:02:38 +0200, by Jan Kanis
bump version
Wed, 28 May 2014 12:02:42 +0200, by Jan Kanis
depend on latest python3, add $ENV[PYTHONPATH] to PYTHONPATH
Wed, 28 May 2014 11:39:36 +0200, by Jan Kanis
update tests
Tue, 27 May 2014 12:50:52 +0200, by Jan Kanis
set other environment variables as well
Tue, 27 May 2014 12:45:50 +0200, by Jan Kanis
depend on new python3; set LD_LIBRARY_PATH
Mon, 26 May 2014 15:34:54 +0200, by Jan Kanis
fix interpreter setting
Mon, 26 May 2014 14:20:17 +0200, by Jan Kanis
fix depended repository name
Mon, 26 May 2014 14:10:48 +0200, by Jan Kanis
add changeset revision in xml
Mon, 26 May 2014 13:14:39 +0200, by Jan Kanis
depend on python 3; fix internal links with multiple iterations
Mon, 26 May 2014 13:07:13 +0200, by Jan Kanis
minor fix
Wed, 21 May 2014 18:39:51 +0200, by Jan Kanis
fix python 2 compatibility
Wed, 21 May 2014 18:34:35 +0200, by Jan Kanis
unicodify python sources
Wed, 21 May 2014 18:17:03 +0200, by Jan Kanis
debug action
Tue, 20 May 2014 16:19:05 +0200, by Jan Kanis
fix prior_installation_required flag
Tue, 20 May 2014 15:45:23 +0200, by Jan Kanis
add prior_installation_required flag
Tue, 20 May 2014 15:43:16 +0200, by Jan Kanis
change tool_dependencies.xml
Tue, 20 May 2014 15:22:28 +0200, by Jan Kanis
move dependency on blast_datatypes back to repository_dependencies.xml
Tue, 20 May 2014 15:10:08 +0200, by Jan Kanis
add dependency on cython
Tue, 20 May 2014 15:04:54 +0200, by Jan Kanis
another attempt at getting dependencies right
Tue, 20 May 2014 14:56:10 +0200, by Jan Kanis
update version
Mon, 19 May 2014 18:34:25 +0200, by Jan Kanis
more dependency updates, now including the python package dependencies
Mon, 19 May 2014 18:22:24 +0200, by Jan Kanis
further update dependency information, hope it works now
Mon, 19 May 2014 15:52:52 +0200, by Jan Kanis
update dependency
Mon, 19 May 2014 15:09:55 +0200, by Jan Kanis
add repository dependency; add <stdio> tag; update version
Mon, 19 May 2014 14:41:55 +0200, by Jan Kanis
add argparse dependency for python <2.7 and update version
Thu, 15 May 2014 18:24:15 +0200, by Jan Kanis
add argparse dependency for python <2.7
Thu, 15 May 2014 18:22:49 +0200, by Jan Kanis
fix tool xml file name
Thu, 15 May 2014 18:15:04 +0200, by Jan Kanis
update version
Thu, 15 May 2014 18:08:27 +0200, by Jan Kanis
add test update script, add url to github page
Thu, 15 May 2014 17:29:44 +0200, by Jan Kanis
fix tests
Thu, 15 May 2014 17:22:02 +0200, by Jan Kanis
rename NCBI reference example
Thu, 15 May 2014 16:59:18 +0200, by Jan Kanis
remove unneeded files
Thu, 15 May 2014 16:53:04 +0200, by Jan Kanis
reorganise to match galaxy tool shed layout
Thu, 15 May 2014 16:50:38 +0200, by Jan Kanis
add blast2html.xml config setting
Thu, 15 May 2014 16:46:30 +0200, by Jan Kanis
improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy
Thu, 15 May 2014 16:46:09 +0200, by Jan Kanis
add a warning if galaxy strips the html header/stylesheet
Thu, 15 May 2014 12:44:44 +0200, by Jan Kanis
add more example xmls, move them to a subdirectory
Thu, 15 May 2014 12:24:02 +0200, by Jan Kanis
use Iteration_message tag; also work with unexpected Hit_id values
Thu, 15 May 2014 12:12:21 +0200, by Jan Kanis
fix sectioning, add footer
Thu, 15 May 2014 11:05:39 +0200, by Jan Kanis
rename blast2html
Thu, 15 May 2014 10:48:09 +0200, by Jan Kanis
style changes
Thu, 15 May 2014 10:45:34 +0200, by Jan Kanis
Add index for multiple results; fix layout of query ruler for edge case
Wed, 14 May 2014 16:20:29 +0200, by Jan Kanis
make it work with multiple queries
Tue, 13 May 2014 18:06:36 +0200, by Jan Kanis
add a parameter for the template
Tue, 13 May 2014 15:26:20 +0200, by Jan Kanis
make html more semantic
Tue, 13 May 2014 12:54:03 +0200, by Jan Kanis
fix validation, reindent
Tue, 13 May 2014 12:22:35 +0200, by Jan Kanis
minor update
Mon, 12 May 2014 17:33:08 +0200, by Jan Kanis
small bugfixes (one for python 3.4)
Mon, 12 May 2014 17:32:01 +0200, by Jan Kanis
renamed files
Mon, 12 May 2014 17:13:49 +0200, by Jan Kanis
add links, refactor, proper commandline arguments
Mon, 12 May 2014 17:12:24 +0200, by Jan Kanis
proper layout for alignments, added some links
Mon, 12 May 2014 13:55:04 +0200, by Jan Kanis
All data is displayed now, still some formatting to do
Fri, 09 May 2014 18:16:48 +0200, by Jan Kanis
fix descriptiontable width
Thu, 08 May 2014 18:59:32 +0200, by Jan Kanis
div-ified graphics
Thu, 08 May 2014 17:33:41 +0200, by Jan Kanis
intermediate commit before converting some tables to divs
Thu, 08 May 2014 16:51:52 +0200, by Jan Kanis
slight update
Wed, 07 May 2014 19:02:20 +0200, by Jan Kanis
first features are working, partial match table
Wed, 07 May 2014 18:49:54 +0200, by Jan Kanis
trim everything that can be without breaking the graphics summary
Tue, 06 May 2014 17:52:14 +0200, by Jan Kanis
undo trimming that broke the graphics summary
Tue, 06 May 2014 17:47:16 +0200, by Jan Kanis
more trimming down
Tue, 06 May 2014 17:41:24 +0200, by Jan Kanis
add trimmed down html example
Tue, 06 May 2014 17:36:10 +0200, by Jan Kanis

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