# HG changeset patch # User Jan Kanis # Date 1403601292 -7200 # Node ID 2edb77030a9edeeb2d8d6b601c5808e33f0cafc0 # Parent 4340432b7191b7c0e356966792d0ddd14a538d74 re-include backed out revisions and update version numbers diff -r 4340432b7191 -r 2edb77030a9e blast2html.xml --- a/blast2html.xml Tue Jun 24 11:00:57 2014 +0200 +++ b/blast2html.xml Tue Jun 24 11:14:52 2014 +0200 @@ -1,12 +1,12 @@ - + Convert BLAST XML to HTML - blast2html_venv + blast2html_venv - blast2html.py -i "${input}" -o "${output}" + blast2html.py -i "${input}" -o "${output}" diff -r 4340432b7191 -r 2edb77030a9e tool_dependencies.xml --- a/tool_dependencies.xml Tue Jun 24 11:00:57 2014 +0200 +++ b/tool_dependencies.xml Tue Jun 24 11:14:52 2014 +0200 @@ -10,12 +10,7 @@ toolshed="http://toolshed.g2.bx.psu.edu" changeset_revision="039b04adcfee" /> - - - - - + @@ -27,26 +22,14 @@ toolshed="http://toolshed.g2.bx.psu.edu" changeset_revision="039b04adcfee"> - - - - - - # Unset any saved environment settings from parent virtual - # environments, e.g. for python 2 or if Galaxy itself is running - # from within a virtual environment. - unset _OLD_VIRTUAL_PATH; unset _OLD_VIRTUAL_PYTHONHOME - pyvenv blast2html_venv - blast2html_venv/bin/pip3 install lxml jinja2 - + + + lxml==3.3.5 + jinja2==2.7.3 + - - $INSTALL_DIR/blast2html_venv/lib/python3.4/site-packages - $INSTALL_DIR/blast2html_venv/bin - $ENV[LD_LIBRARY_PATH] @@ -54,7 +37,7 @@ - A Python 3 virtual environment that includes the python packages blast2html depends on, which are lxml and jinja2. + A Python 2 virtual environment that includes the python packages blast2html depends on, which are lxml and jinja2.