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Nucleotide Sequence (16 letters)

Query ID:	106397
Query definition:	No definition line
Query length:	16
Program:	BLASTN 2.2.29+
Database:	pdb

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Graphic Summary

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Distribution of 1 Blast Hits on the Query Sequence

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+ Mouse-over to show defline and scores, click to show alignments +

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Color key for alignment scores

<40

40–50

50–80

80–200

200≤

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query:

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Descriptions

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Sequences producing significant alignments:

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

Description	Max score	Total score	Query cover	E value	Ident	Accession
+ Chain A, E. Coli 70s-fmetval-trnaval Post-translocation Complex (post4, 50s Subunit) +	32.2	77.3	100%	0.0007913	100%	3J5K_A
+ Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3b, 50s Subunit) +	32.2	77.3	100%	0.0007913	100%	3J5I_A
+ Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3a, 50s Subunit) +	32.2	77.3	100%	0.0007913	100%	3J5G_A
+ Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2b, 50s Subunit) +	32.2	77.3	100%	0.0007913	100%	3J5E_A
+ Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2a, 50s Subunit) +	32.2	77.3	100%	0.0007913	100%	3J5C_A
+ Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Post- Translocation State (post1, 50s Subunit) +	32.2	77.3	100%	0.0007913	100%	3J5A_A
+ Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5b, 50s Subunit) +	32.2	77.3	100%	0.0007913	100%	3J58_A
+ Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5a, 50s Subunit) +	32.2	77.3	100%	0.0007913	100%	3J56_A
+ Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre4, 50s Subunit) +	32.2	77.3	100%	0.0007913	100%	3J54_A
+ Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1a, 50s Subunit) +	32.2	77.3	100%	0.0007913	100%	3J52_A
+ Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre3, 50s Subunit) +	32.2	77.3	100%	0.0007913	100%	3J51_A
+ Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre2, 50s Subunit) +	32.2	77.3	100%	0.0007913	100%	3J50_A
+ Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1b, 50s Subunit) +	32.2	77.3	100%	0.0007913	100%	3J4X_A
+ Chain A, Tetracycline Resistance Protein Tet(o) Bound To The Ribosome +	32.2	62.9	100%	0.0007913	100%	3J37_A
+ Chain B, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Near-Cognate Codon. +	32.2	62.9	100%	0.0007913	100%	3IZT_B
+ Chain B, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 50s Subunit. +	32.2	77.3	100%	0.0007913	100%	3FIK_B
+ Chain B, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre-Accommodation State +	32.2	77.3	100%	0.0007913	100%	3E1B_B
+ Chain 0, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143 +	32.2	77.3	100%	0.0007913	100%	2GYC_0
+ Chain 0, Structure Of The 50s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056 +	32.2	77.3	100%	0.0007913	100%	2GYA_0
+ Chain B, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. +	32.2	77.3	100%	0.0007913	100%	2I2V_B
+ Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. +	32.2	77.3	100%	0.0007913	100%	2AW4_B
+ Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. +	32.2	77.3	100%	0.0007913	100%	2AWB_B
+ Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. +	32.2	77.3	100%	0.0007913	100%	1VS6_B
+ Chain 0, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome +	32.2	77.3	100%	0.0007913	100%	1P85_0
+ Chain B, 23s Rrna Structure Fitted To A Cryo-Electron Microscopic Map At 7.5 Angstroms Resolution +	26.3	40.6	81%	0.04882	100%	1C2W_B
+ Chain 1, Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit) +	18.3	36.7	81%	11.9	92%	3J44_1
+ Chain 1, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Rna) +	18.3	36.7	81%	11.9	92%	3J2L_1
+ Chain a, Model Of The Large Subunit Rna Based On A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome +	18.3	77.8	88%	11.9	100%	3J62_AA
+ Chain A, 39s Large Subunit Of The Porcine Mitochondrial Ribosome +	18.3	18.3	56%	11.9	100%	4CE4_A
+ Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex +	18.3	79.8	81%	11.9	100%	4BYP_5
+ Chain 5, Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex +	18.3	79.8	81%	11.9	100%	4BYW_5
+ Chain 0, The Re-refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution: More Complete Structure Of The L7/l12 And L1 Stalk, L5 And Lx Proteins +	18.3	51.0	75%	11.9	100%	4HUB_0
+ Chain 5, Structure Of The H. Sapiens 60s Rrna +	18.3	128.8	100%	11.9	100%	3J3F_5
+ Chain 5, Structure Of The D. Melanogaster 60s Rrna +	18.3	63.4	100%	11.9	100%	3J3E_5
+ Chain B, High_resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome +	18.3	32.7	81%	11.9	100%	3ZEX_B
+ Chain 0, Crystal Structure Of Enhanced Macrolide Bound To 50s Ribosomal Subunit +	18.3	32.7	56%	11.9	100%	3OW2_0
+ Chain 0, The Cryo-em Structure Of The Archaeal 50s Ribosomal Subunit In Complex With Initiation Factor 6 +	18.3	51.0	75%	11.9	100%	4ADX_0
+ Chain 6, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Ribosomal Rna And Ions Of The 40s Subunit, Ribosome B +	18.3	47.1	88%	11.9	100%	3U5F_6
+ Chain 2, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Ribosomal Rna And Ions Of The 40s Subunit, Ribosome A +	18.3	47.1	88%	11.9	100%	3U5B_2
+ Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 4. +	18.3	51.0	75%	11.9	100%	4A1D_1
+ Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 1 +	18.3	51.0	75%	11.9	100%	4A18_1
+ Chain 1, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 3. +	18.3	51.0	75%	11.9	100%	4A1B_1
+ Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9.8a Cryo-Em Map: Classic Pre State 1 +	18.3	18.3	56%	11.9	100%	3J0L_8
+ Chain 8, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9a Cryo-Em Map: Classic Pre State 2 +	18.3	18.3	56%	11.9	100%	3J0O_8
+ Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The First 80s In The Asymmetric Unit. +	18.3	79.8	81%	11.9	100%	3O58_1
+ Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The Second 80s In The Asymmetric Unit. +	18.3	79.8	81%	11.9	100%	3O5H_1
+ Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The First 80s In The Asymmetric Unit. +	18.3	47.1	88%	11.9	100%	3O2Z_1
+ Chain 1, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The Second 80s In The Asymmetric Unit. +	18.3	47.1	88%	11.9	100%	3O30_1
+ Chain A, Model Of The Large Subunit Rna Based On A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome (With Es27l-In Conformation) +	18.3	79.8	81%	11.9	100%	3IZF_A
+ Chain A, Model Of The Small Subunit Rna Based On A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome +	18.3	47.1	88%	11.9	100%	3IZE_A
+ Chain I, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c) +	18.3	18.3	56%	11.9	100%	3KO2_I
+ Chain H, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c) +	18.3	18.3	56%	11.9	100%	3KO2_H
+ Chain D, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c) +	18.3	18.3	56%	11.9	100%	3KO2_D
+ Chain C, I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-7c) +	18.3	18.3	56%	11.9	100%	3KO2_C
+ Chain 0, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The Large Ribosomal Subunit +	18.3	51.0	75%	11.9	100%	3I56_0
+ Chain 5, Structure Of The 60s Rrna For Eukaryotic Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution +	18.3	79.8	81%	11.9	100%	3JYX_5
+ Chain A, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution +	18.3	47.1	88%	11.9	100%	3JYV_A
+ Chain 3, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is In File 1s1h. +	18.3	32.7	56%	11.9	100%	1S1I_3
+ Chain 0, Negamycin Binds To The Wall Of The Nascent Chain Exit Tunnel Of The 50s Ribosomal Subunit +	18.3	32.7	56%	11.9	100%	2QEX_0
+ Chain 0, The Structure Of The Antibiotic Linezolid Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui +	18.3	32.7	56%	11.9	100%	3CPW_0
+ Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2616a +	18.3	51.0	75%	11.9	100%	3CCV_0
+ Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482c +	18.3	51.0	75%	11.9	100%	3CCU_0
+ Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482a +	18.3	51.0	75%	11.9	100%	3CCS_0
+ Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488c. Density For Anisomycin Is Visible But Not Included In The Model. +	18.3	51.0	75%	11.9	100%	3CCR_0
+ Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488u +	18.3	51.0	75%	11.9	100%	3CCQ_0
+ Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2611u +	18.3	36.7	75%	11.9	100%	3CCM_0
+ Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535c. Density For Anisomycin Is Visible But Not Included In Model. +	18.3	51.0	75%	11.9	100%	3CCL_0
+ Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2534u +	18.3	51.0	75%	11.9	100%	3CCJ_0
+ Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535a +	18.3	51.0	75%	11.9	100%	3CCE_0
+ Chain 0, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2487u +	18.3	51.0	75%	11.9	100%	3CC7_0
+ Chain 0, The Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution With Rrna Sequence For The 23s Rrna And Genome-Derived Sequences For R-Proteins +	18.3	51.0	75%	11.9	100%	3CC2_0
+ Chain 0, Structure Of A Mammalian Ribosomal 60s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map +	18.3	63.4	81%	11.9	100%	2ZKR_0
+ Chain 0, A More Complete Structure Of The The L7L12 STALK OF THE Haloarcula Marismortui 50s Large Ribosomal Subunit +	18.3	32.7	56%	11.9	100%	2QA4_0
+ Chain R, Structural Model For The Large Subunit Of The Mammalian Mitochondrial Ribosome +	18.3	18.3	56%	11.9	100%	2FTC_R
+ Chain 0, Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution +	18.3	32.7	56%	11.9	100%	1S72_0
+ Chain 0, Crystal Structure Of Virginiamycin M And S Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui +	18.3	51.0	75%	11.9	100%	1YIT_0
+ Chain 0, Crystal Structure Of Azithromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui +	18.3	51.0	75%	11.9	100%	1YHQ_0
+ Chain 0, Crystal Structure Of Quinupristin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui +	18.3	51.0	75%	11.9	100%	1YJW_0
+ Chain A, Crystal Structure Of Cca-Phe-Cap-Biotin Bound Simultaneously At Half Occupancy To Both The A-Site And P- Site Of The The 50s Ribosomal Subunit. +	18.3	32.7	56%	11.9	100%	1Q86_A
+ Chain 0, Fully Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution +	18.3	32.7	56%	11.9	100%	1JJ2_0
+ Chain A, Co-Crystal Structure Of Blasticidin S Bound To The 50s Ribosomal Subunit +	18.3	32.7	56%	11.9	100%	1KC8_A
+ Chain 0, Crystal Structure Of The Large Ribosomal Subunit From Haloarcula Marismortui At 2.4 Angstrom Resolution +	18.3	32.7	56%	11.9	100%	1FFK_0
+ Chain A, Large Ribosomal Subunit Complexed With A 13 Bp Minihelix- Puromycin Compound +	18.3	32.7	56%	11.9	100%	1FG0_A
+ Chain A, Large Ribosomal Subunit Complexed With R(Cc)-Da-Puromycin +	18.3	32.7	56%	11.9	100%	1FFZ_A
+ Chain F, Crystal Structure Of The Catalytic Domain Of Rlub In Complex With A 21-nucleotide Rna Substrate +	16.4	16.4	50%	47.03	100%	4LGT_F
+ Chain E, Crystal Structure Of The Catalytic Domain Of Rlub In Complex With A 21-nucleotide Rna Substrate +	16.4	16.4	50%	47.03	100%	4LGT_E
+ Chain A, Thermus Thermophilus Ribosome +	16.4	32.7	69%	47.03	100%	4BTD_A
+ Chain A, Crystal Structure Of Blasticidin S Bound To Thermus Thermophilus 70s Ribosome. This File Contains The 50s Subunit And Blasticidin S Molecule From The First 70s Ribosome. +	16.4	32.7	69%	47.03	100%	4L6J_A
+ Chain A, Crystal Structure Of The 70s Ribosome Bound With The Q253p Mutant Of Release Factor Rf2. 50s Of The A Subunit +	16.4	32.7	69%	47.03	100%	4KFI_A
+ Chain A, Crystal Structure Of Thermus Thermophilus 70s Containing Trnas And Mrna Stop Codon With Pseudouridine +	16.4	32.7	69%	47.03	100%	4K0Q_A
+ Chain A, Crystal Structure Of Thermus Thermophilus 70s Containing Trnas And Mrna Stop Codon With Pseudouridine +	16.4	32.7	69%	47.03	100%	4K0M_A
+ Chain A, Atomic Model Of The Immature 50s Subunit From Bacillus Subtilis (state I-a) +	16.4	73.8	88%	47.03	100%	3J3V_A
+ Chain A, Atomic Model Of The Immature 50s Subunit From Bacillus Subtilis (state Ii-a) +	16.4	73.8	88%	47.03	100%	3J3W_A
+ Chain A, Crystal Structure Of The Bacterial Ribosome Ram Mutation G347u. This Entry Contains The 50s Ribosomal Subunit Of The Second 70s Molecule In The Asymmetric Unit +	16.4	32.7	69%	47.03	100%	3V6X_A
+ Chain A, Crystal Structure Of The Bacterial Ribosome Ram Mutation G347u. This Entry Contains The 50s Ribosomal Subunit Of The First 70s Molecule In The Asymmetric Unit +	16.4	32.7	69%	47.03	100%	3V6W_A
+ Chain d, The Cryo-Em Structure Of A 3d Dna-Origami Object +	16.4	16.4	50%	47.03	100%	2YMI_DD
+ Chain A, The Cryo-Em Structure Of A 3d Dna-Origami Object +	16.4	30.7	56%	47.03	100%	2YMF_A
+ Chain A, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4). This File Contains The 50s Subunit From Molecule I. +	16.4	32.7	69%	47.03	100%	2J01_A
+ Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Magnesium +	16.4	16.4	50%	47.03	100%	4AQX_C
+ Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Calcium +	16.4	16.4	50%	47.03	100%	4AQU_C

+ +

+ + + +

Alignments

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain A, E. Coli 70s-fmetval-trnaval Post-translocation Complex (post4, 50s Subunit)

+ Sequence ID: pdb|3J5K|A + Length: 2903 + Number of Matches: 4 +

+ + +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ Range 4: 2027 to 2033 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   2027  GTGAAGA  2033

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3b, 50s Subunit)

+ Sequence ID: pdb|3J5I|A + Length: 2903 + Number of Matches: 4 +

+ + +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ Range 4: 2027 to 2033 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   2027  GTGAAGA  2033

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post3a, 50s Subunit)

+ Sequence ID: pdb|3J5G|A + Length: 2903 + Number of Matches: 4 +

+ + +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ Range 4: 2027 to 2033 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   2027  GTGAAGA  2033

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2b, 50s Subunit)

+ Sequence ID: pdb|3J5E|A + Length: 2903 + Number of Matches: 4 +

+ + +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ Range 4: 2027 to 2033 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   2027  GTGAAGA  2033

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Post- Translocation State (post2a, 50s Subunit)

+ Sequence ID: pdb|3J5C|A + Length: 2903 + Number of Matches: 4 +

+ + +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ Range 4: 2027 to 2033 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   2027  GTGAAGA  2033

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Post- Translocation State (post1, 50s Subunit)

+ Sequence ID: pdb|3J5A|A + Length: 2903 + Number of Matches: 4 +

+ + +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ Range 4: 2027 to 2033 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   2027  GTGAAGA  2033

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5b, 50s Subunit)

+ Sequence ID: pdb|3J58|A + Length: 2903 + Number of Matches: 4 +

+ + +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ Range 4: 2027 to 2033 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   2027  GTGAAGA  2033

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre5a, 50s Subunit)

+ Sequence ID: pdb|3J56|A + Length: 2903 + Number of Matches: 4 +

+ + +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ Range 4: 2027 to 2033 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   2027  GTGAAGA  2033

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Hybrid Pre- Translocation State (pre4, 50s Subunit)

+ Sequence ID: pdb|3J54|A + Length: 2903 + Number of Matches: 4 +

+ + +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ Range 4: 2027 to 2033 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   2027  GTGAAGA  2033

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1a, 50s Subunit)

+ Sequence ID: pdb|3J52|A + Length: 2903 + Number of Matches: 4 +

+ + +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ Range 4: 2027 to 2033 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   2027  GTGAAGA  2033

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre3, 50s Subunit)

+ Sequence ID: pdb|3J51|A + Length: 2903 + Number of Matches: 4 +

+ + +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ Range 4: 2027 to 2033 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   2027  GTGAAGA  2033

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Intermediate Pre- Translocation State (pre2, 50s Subunit)

+ Sequence ID: pdb|3J50|A + Length: 2903 + Number of Matches: 4 +

+ + +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ Range 4: 2027 to 2033 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   2027  GTGAAGA  2033

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain A, E. Coli 70s-fmetval-trnaval-trnafmet Complex In Classic Pre- Translocation State (pre1b, 50s Subunit)

+ Sequence ID: pdb|3J4X|A + Length: 2903 + Number of Matches: 4 +

+ + +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ Range 4: 2027 to 2033 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   2027  GTGAAGA  2033

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain A, Tetracycline Resistance Protein Tet(o) Bound To The Ribosome

+ Sequence ID: pdb|3J37|A + Length: 2904 + Number of Matches: 3 +

+ + +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain B, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Near-Cognate Codon.

+ Sequence ID: pdb|3IZT|B + Length: 2904 + Number of Matches: 3 +

+ + + See 7 more title(s) + + +

Chain B, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Cognate Codon

+ Sequence ID: pdb|3IZU|B +

Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class2 Of The Six Classes)

+ Sequence ID: pdb|3J0T|B +

Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 4a Of The Six Classes)

+ Sequence ID: pdb|3J0W|B +

Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 4b Of The Six Classes)

+ Sequence ID: pdb|3J0Y|B +

Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 3 Of The Six Classes)

+ Sequence ID: pdb|3J11|B +

Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 5 Of The Six Classes)

+ Sequence ID: pdb|3J12|B +

Chain B, Structural Characterization Of Mrna-Trna Translocation Intermediates (50s Ribosome Of Class 6 Of The Six Classes)

+ Sequence ID: pdb|3J14|B +

+ +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain B, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 50s Subunit.

+ Sequence ID: pdb|3FIK|B + Length: 2903 + Number of Matches: 4 +

+ + + See 19 more title(s) + + +

Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting

+ Sequence ID: pdb|3I1N|A +

Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting

+ Sequence ID: pdb|3I1P|A +

Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting

+ Sequence ID: pdb|3I1R|A +

Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting

+ Sequence ID: pdb|3I1T|A +

Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting

+ Sequence ID: pdb|3I20|A +

Chain A, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting

+ Sequence ID: pdb|3I22|A +

Chain B, E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. This File Contains The 50s, The P-Site Trna And The Tnac Leader Peptide (Part 2 Of 2).

+ Sequence ID: pdb|2WWQ|B +

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The First 70s Ribosome With Chloramphenicol Bound.

+ Sequence ID: pdb|3OFC|A +

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Clindamycin.

+ Sequence ID: pdb|3OFZ|A +

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The Second 70s Ribosome.

+ Sequence ID: pdb|3OG0|A +

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome.

+ Sequence ID: pdb|3OAS|A +

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Telithromycin Bound.

+ Sequence ID: pdb|3OAT|A +

Chain A, Structures Of The Bacterial Ribosome In Classical And Hybrid States Of Trna Binding

+ Sequence ID: pdb|3R8S|A +

Chain A, Structures Of The Bacterial Ribosome In Classical And Hybrid States Of Trna Binding

+ Sequence ID: pdb|3R8T|A +

Chain A, Crystal Structure Of Release Factor Rf3 Trapped In The Gtp State On A Rotated Conformation Of The Ribosome

+ Sequence ID: pdb|3SGF|A +

Chain A, Crystal Structure Of Release Factor Rf3 Trapped In The Gtp State On A Rotated Conformation Of The Ribosome (Without Viomycin)

+ Sequence ID: pdb|3UOS|A +

Chain A, Structure Of The Bacterial Ribosome Complexed By Tmrna-Smpb And Ef-G During Translocation And Mld-Loading (50s Subunit)

+ Sequence ID: pdb|3J19|A +

Chain A, Structure Of The Ribosome With Elongation Factor G Trapped In The Pre- Translocation State (pre-translocation 70s*trna Structure, 50s Subunit)

+ Sequence ID: pdb|3J5U|A +

Chain A, Structure Of The Ribosome With Elongation Factor G Trapped In The Pre- Translocation State (pre-translocation 70s*trna*ef-g Structure, 50s Subunit)

+ Sequence ID: pdb|3J5W|A +

+ +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ Range 4: 2027 to 2033 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   2027  GTGAAGA  2033

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain B, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre-Accommodation State

+ Sequence ID: pdb|3E1B|B + Length: 2903 + Number of Matches: 4 +

+ + + See 1 more title(s) + + + + +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ Range 4: 2027 to 2033 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   2027  GTGAAGA  2033

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain 0, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143

+ Sequence ID: pdb|2GYC|0 + Length: 2740 + Number of Matches: 4 +

+ + +

+ Range 1: 889 to 904 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    889  CGTCCGTCGTGAAGAG  904

+ Range 2: 2453 to 2460 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2453  CGTCGTGA  2460

+ Range 3: 776 to 782 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    776  TCGTGAA  782

+ Range 4: 1910 to 1916 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   1910  GTGAAGA  1916

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain 0, Structure Of The 50s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056

+ Sequence ID: pdb|2GYA|0 + Length: 2740 + Number of Matches: 4 +

+ + +

+ Range 1: 889 to 904 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    889  CGTCCGTCGTGAAGAG  904

+ Range 2: 2453 to 2460 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2453  CGTCGTGA  2460

+ Range 3: 776 to 782 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    776  TCGTGAA  782

+ Range 4: 1910 to 1916 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   1910  GTGAAGA  1916

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain B, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

+ Sequence ID: pdb|2I2V|B + Length: 2904 + Number of Matches: 4 +

+ + +

+ Range 1: 961 to 976 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
32.2 bits(16)	0.0	16/16(100%)	0/16(0%)	Plus/Plus

+ +

Query        1  CGTCCGTCGTGAAGAG  16
+                ||||||||||||||||
+Subject    961  CGTCCGTCGTGAAGAG  976

+ Range 2: 2591 to 2598 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
16.4 bits(8)	47.0	8/8(100%)	0/8(0%)	Plus/Plus

+ +

Query        5  CGTCGTGA  12
+                ||||||||
+Subject   2591  CGTCGTGA  2598

+ Range 3: 839 to 845 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        7  TCGTGAA  13
+                |||||||
+Subject    839  TCGTGAA  845

+ Range 4: 2027 to 2033 + GenBank + Graphics +

+ + + + + + + + + + + + +

Score	Expect	Identities	Gaps	Strand
14.4 bits(7)	185.8	7/7(100%)	0/7(0%)	Plus/Plus

+ +

Query        9  GTGAAGA  15
+                |||||||
+Subject   2027  GTGAAGA  2033

+ +

Descriptions

+ GenBank + Graphics +

+ +

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

+ Sequence ID: pdb|2AW4|B + Length: 2904 + Number of Matches: 4 +

+ + + See 38 more title(s) + + +

+ Sequence ID: pdb|2I2T|B +

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes.

+ Sequence ID: pdb|2QOV|B +

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes.

+ Sequence ID: pdb|2QOX|B +

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes.

+ Sequence ID: pdb|2QOZ|B +

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes.

+ Sequence ID: pdb|2QP1|B +

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

+ Sequence ID: pdb|2QAM|B +

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

+ Sequence ID: pdb|2QAO|B +

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

+ Sequence ID: pdb|2QBA|B +

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

+ Sequence ID: pdb|2QBC|B +

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

+ Sequence ID: pdb|2QBE|B +

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

+ Sequence ID: pdb|2QBG|B +

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

+ Sequence ID: pdb|2QBI|B +

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

+ Sequence ID: pdb|2QBK|B +

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

+ Sequence ID: pdb|2Z4L|B +

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400.

+ Sequence ID: pdb|2Z4N|B +

Chain B, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 1 Of 4)

+ Sequence ID: pdb|2VHM|B +

Chain B, Structure Of Pdf Binding Helix In Complex With The Ribosome. (Part 2 Of 4)

+ Sequence ID: pdb|2VHN|B +

Chain B, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound

+ Sequence ID: pdb|2RDO|B +

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes.

+ Sequence ID: pdb|3DF2|B +

Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes.

+ Sequence ID: pdb|3DF4|B +

Chain 8, Ribosome-Secy Complex. This Entry 3kcr Contains 50s Ribosomal Subnit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3kc4

+ Sequence ID: pdb|3KCR|8 +

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Cem-101.

+ Sequence ID: pdb|3ORB|A +

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome.

+ Sequence ID: pdb|3OFQ|A +

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Erthromycin Bound.

+ Sequence ID: pdb|3OFR|A +

Chain A, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The Second 70s Ribosome.

+ Sequence ID: pdb|3OFD|A +

Chain 8, Structure Of The Ribosome-Secye Complex In The Membrane Environment

+ Sequence ID: pdb|3J01|8 +

Chain A, Allosteric Control Of The Ribosome By Small-Molecule Antibiotics

+ Sequence ID: pdb|4GAR|A +

Chain A, Allosteric Control Of The Ribosome By Small-Molecule Antibiotics

+ Sequence ID: pdb|4GAU|A +