Mercurial > repos > jankanis > blast2html

changeset 33:3bb5da68305e

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add test update script, add url to github page
author Jan Kanis <jan.code@jankanis.nl>
date Thu, 15 May 2014 17:29:44 +0200
parents ce8f29efc0a1
children 5d7a82f49485
files blast2html.html.jinja test-data/blast xml example1.html test-data/blast xml example2.html test-data/blast xml example3.html test-data/blast xml example4.html test-data/refresh_test_results.sh
diffstat 6 files changed, 18 insertions(+), 10 deletions(-) [+]
line wrap: on
line diff
--- a/blast2html.html.jinja	Thu May 15 17:22:02 2014 +0200
+++ b/blast2html.html.jinja	Thu May 15 17:29:44 2014 +0200
@@ -2,7 +2,7 @@
 <html>
   <head>
     <meta charset="UTF-8">
-    <meta name=generator content="blast2html; see ...">
+    <meta name=generator content="blast2html; see https://github.com/thehyve/blast2html/">
     
     <title>Blast output</title>
     
@@ -620,7 +620,7 @@
     </div>
 
     <footer>
-      This page was generated by <a href="...">blast2html</a>.
+      This page was generated by <a href="https://github.com/thehyve/blast2html/">blast2html</a>.
     </footer>
   </body>
 </html>
--- a/test-data/blast xml example1.html	Thu May 15 17:22:02 2014 +0200
+++ b/test-data/blast xml example1.html	Thu May 15 17:29:44 2014 +0200
@@ -2,7 +2,7 @@
 <html>
   <head>
     <meta charset="UTF-8">
-    <meta name=generator content="blast2html; see ...">
+    <meta name=generator content="blast2html; see https://github.com/thehyve/blast2html/">
     
     <title>Blast output</title>
     
@@ -13213,7 +13213,7 @@
     </div>
 
     <footer>
-      This page was generated by <a href="...">blast2html</a>.
+      This page was generated by <a href="https://github.com/thehyve/blast2html/">blast2html</a>.
     </footer>
   </body>
 </html>
--- a/test-data/blast xml example2.html	Thu May 15 17:22:02 2014 +0200
+++ b/test-data/blast xml example2.html	Thu May 15 17:29:44 2014 +0200
@@ -2,7 +2,7 @@
 <html>
   <head>
     <meta charset="UTF-8">
-    <meta name=generator content="blast2html; see ...">
+    <meta name=generator content="blast2html; see https://github.com/thehyve/blast2html/">
     
     <title>Blast output</title>
     
@@ -417,7 +417,7 @@
     </div>
 
     <footer>
-      This page was generated by <a href="...">blast2html</a>.
+      This page was generated by <a href="https://github.com/thehyve/blast2html/">blast2html</a>.
     </footer>
   </body>
 </html>
--- a/test-data/blast xml example3.html	Thu May 15 17:22:02 2014 +0200
+++ b/test-data/blast xml example3.html	Thu May 15 17:29:44 2014 +0200
@@ -2,7 +2,7 @@
 <html>
   <head>
     <meta charset="UTF-8">
-    <meta name=generator content="blast2html; see ...">
+    <meta name=generator content="blast2html; see https://github.com/thehyve/blast2html/">
     
     <title>Blast output</title>
     
@@ -3523,7 +3523,7 @@
     </div>
 
     <footer>
-      This page was generated by <a href="...">blast2html</a>.
+      This page was generated by <a href="https://github.com/thehyve/blast2html/">blast2html</a>.
     </footer>
   </body>
 </html>
--- a/test-data/blast xml example4.html	Thu May 15 17:22:02 2014 +0200
+++ b/test-data/blast xml example4.html	Thu May 15 17:29:44 2014 +0200
@@ -2,7 +2,7 @@
 <html>
   <head>
     <meta charset="UTF-8">
-    <meta name=generator content="blast2html; see ...">
+    <meta name=generator content="blast2html; see https://github.com/thehyve/blast2html/">
     
     <title>Blast output</title>
     
@@ -1599,7 +1599,7 @@
     </div>
 
     <footer>
-      This page was generated by <a href="...">blast2html</a>.
+      This page was generated by <a href="https://github.com/thehyve/blast2html/">blast2html</a>.
     </footer>
   </body>
 </html>
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/refresh_test_results.sh	Thu May 15 17:29:44 2014 +0200
@@ -0,0 +1,8 @@
+#!/bin/sh
+
+# run this from the directory it exists in to update the test outputs
+
+for i in 1 2 3 4
+do
+	../blast2html.py -i "blast xml example$i.xml" -o "blast xml example$i.html"
+done